BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0005

Length=675
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|308376284|ref|ZP_07438242.2|  DNA gyrase subunit B gyrB [Mycob...  1384    0.0  
gi|254366465|ref|ZP_04982509.1|  DNA gyrase subunit B gyrB [Mycob...  1384    0.0  
gi|15839377|ref|NP_334414.1|  DNA gyrase subunit B [Mycobacterium...  1384    0.0  
gi|15607147|ref|NP_214519.1|  DNA gyrase subunit B [Mycobacterium...  1383    0.0  
gi|254233410|ref|ZP_04926736.1|  DNA gyrase subunit B gyrB [Mycob...  1382    0.0  
gi|334265280|gb|AEG75291.1|  DNA gyrase beta subunit [Mycobacteri...  1382    0.0  
gi|167969468|ref|ZP_02551745.1|  DNA gyrase subunit B [Mycobacter...  1382    0.0  
gi|31791182|ref|NP_853675.1|  DNA gyrase subunit B [Mycobacterium...  1382    0.0  
gi|289441372|ref|ZP_06431116.1|  DNA gyrase, B subunit [Mycobacte...  1381    0.0  
gi|334265282|gb|AEG75292.1|  DNA gyrase beta subunit [Mycobacteri...  1380    0.0  
gi|1107468|gb|AAA83016.1|  gyrase B [Mycobacterium tuberculosis H...  1380    0.0  
gi|148821196|ref|YP_001285950.1|  DNA gyrase subunit B [Mycobacte...  1379    0.0  
gi|240172095|ref|ZP_04750754.1|  DNA gyrase subunit B [Mycobacter...  1290    0.0  
gi|296167139|ref|ZP_06849546.1|  DNA topoisomerase (ATP-hydrolyzi...  1238    0.0  
gi|41406103|ref|NP_958939.1|  DNA gyrase subunit B [Mycobacterium...  1233    0.0  
gi|336459820|gb|EGO38734.1|  DNA gyrase, B subunit [Mycobacterium...  1232    0.0  
gi|254820903|ref|ZP_05225904.1|  DNA gyrase subunit B [Mycobacter...  1229    0.0  
gi|342862357|ref|ZP_08718998.1|  DNA gyrase subunit B [Mycobacter...  1226    0.0  
gi|169627114|ref|YP_001700763.1|  DNA gyrase subunit B [Mycobacte...  1226    0.0  
gi|183980040|ref|YP_001848331.1|  DNA gyrase (subunit B) GyrB [My...  1226    0.0  
gi|118615924|ref|YP_904256.1|  DNA gyrase subunit B [Mycobacteriu...  1223    0.0  
gi|108796987|ref|YP_637184.1|  DNA gyrase subunit B [Mycobacteriu...  1189    0.0  
gi|269314031|gb|ACZ36917.1|  DNA gyrase B [Mycobacterium massilie...  1187    0.0  
gi|269314033|gb|ACZ36918.1|  DNA gyrase B [Mycobacterium bolletii...  1187    0.0  
gi|7437446|pir||S70991  DNA topoisomerase (ATP-hydrolyzing) (EC 5...  1185    0.0  
gi|118470567|ref|YP_884428.1|  DNA gyrase subunit B [Mycobacteriu...  1185    0.0  
gi|1226021|emb|CAA58884.1|  DNA gyrase [Mycobacterium smegmatis]      1184    0.0  
gi|1213062|emb|CAA63917.1|  DNA gyrase subunit B [Mycobacterium s...  1181    0.0  
gi|7437456|pir||T10005  DNA topoisomerase (ATP-hydrolyzing) (EC 5...  1170    0.0  
gi|145221416|ref|YP_001132094.1|  DNA gyrase subunit B [Mycobacte...  1169    0.0  
gi|15826870|ref|NP_301133.1|  DNA gyrase subunit B [Mycobacterium...  1169    0.0  
gi|315441702|ref|YP_004074581.1|  DNA gyrase subunit B [Mycobacte...  1168    0.0  
gi|269314035|gb|ACZ36919.1|  DNA gyrase B [Mycobacterium chelonae]    1165    0.0  
gi|120401034|ref|YP_950863.1|  DNA gyrase subunit B [Mycobacteriu...  1162    0.0  
gi|269314037|gb|ACZ36920.1|  DNA gyrase B [Mycobacterium immunoge...  1161    0.0  
gi|226362903|ref|YP_002780683.1|  DNA gyrase subunit B [Rhodococc...  1160    0.0  
gi|54021970|ref|YP_116212.1|  DNA gyrase subunit B [Nocardia farc...  1149    0.0  
gi|111020663|ref|YP_703635.1|  DNA gyrase subunit B [Rhodococcus ...  1141    0.0  
gi|333988645|ref|YP_004521259.1|  DNA gyrase (subunit B) GyrB [My...  1128    0.0  
gi|325677512|ref|ZP_08157176.1|  DNA topoisomerase (ATP-hydrolyzi...  1105    0.0  
gi|333917684|ref|YP_004491265.1|  DNA gyrase subunit B [Amycolici...  1104    0.0  
gi|312137523|ref|YP_004004859.1|  DNA gyrase subunit b [Rhodococc...  1103    0.0  
gi|262200051|ref|YP_003271259.1|  DNA gyrase subunit B [Gordonia ...  1087    0.0  
gi|226303498|ref|YP_002763456.1|  DNA gyrase subunit B [Rhodococc...  1084    0.0  
gi|296392546|ref|YP_003657430.1|  DNA gyrase subunit B [Segnilipa...  1076    0.0  
gi|319949427|ref|ZP_08023488.1|  DNA gyrase subunit B [Dietzia ci...  1073    0.0  
gi|343928739|ref|ZP_08768184.1|  DNA gyrase subunit B [Gordonia a...  1066    0.0  
gi|317509459|ref|ZP_07967077.1|  DNA gyrase, subunit B [Segnilipa...  1054    0.0  
gi|326383914|ref|ZP_08205598.1|  DNA gyrase subunit B [Gordonia n...  1031    0.0  
gi|296137759|ref|YP_003645002.1|  DNA gyrase subunit beta [Tsukam...  1029    0.0  


>gi|308376284|ref|ZP_07438242.2| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis SUMu008]
 gi|308351597|gb|EFP40448.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis SUMu008]
Length=696

 Score = 1384 bits (3583),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  22   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  81

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  82   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  141

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  142  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  201

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  202  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  261

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  262  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  321

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  322  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  381

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  382  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  441

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  442  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  501

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  502  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  561

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  562  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  621

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  622  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  681

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  682  SFITRNAKDVRFLDV  696


>gi|254366465|ref|ZP_04982509.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis str. Haarlem]
 gi|134151977|gb|EBA44022.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis str. Haarlem]
Length=697

 Score = 1384 bits (3583),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  23   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  82

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  83   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  142

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  143  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  202

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  203  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  262

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  263  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  322

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  323  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  382

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  383  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  442

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  443  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  502

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  503  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  562

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  563  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  622

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  623  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  682

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  683  SFITRNAKDVRFLDV  697


>gi|15839377|ref|NP_334414.1| DNA gyrase subunit B [Mycobacterium tuberculosis CDC1551]
 gi|308232616|ref|ZP_07416630.2| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis SUMu001]
 gi|308369281|ref|ZP_07417160.2| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis SUMu002]
 16 more sequence titles
 Length=686

 Score = 1384 bits (3581),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  12   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  71

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  72   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  131

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  132  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  191

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  192  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  251

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  252  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  311

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  312  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  371

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  372  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  431

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  432  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  491

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  492  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  551

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  552  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  611

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  612  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  671

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  672  SFITRNAKDVRFLDV  686


>gi|15607147|ref|NP_214519.1| DNA gyrase subunit B [Mycobacterium tuberculosis H37Rv]
 gi|148659762|ref|YP_001281285.1| DNA gyrase subunit B [Mycobacterium tuberculosis H37Ra]
 gi|253796920|ref|YP_003029921.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis KZN 1435]
 22 more sequence titles
 Length=714

 Score = 1383 bits (3579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  40   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  99

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  100  YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  159

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  160  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  219

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  220  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  279

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  280  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  339

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  340  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  399

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  400  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  459

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  460  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  519

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  520  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  579

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  580  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  639

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  640  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  699

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  700  SFITRNAKDVRFLDV  714


>gi|254233410|ref|ZP_04926736.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis C]
 gi|124603203|gb|EAY61478.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis C]
Length=686

 Score = 1382 bits (3578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 674/675 (99%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  12   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  71

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  72   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  131

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  132  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  191

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  192  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  251

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  252  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  311

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  312  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  371

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  372  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  431

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  432  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  491

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  492  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  551

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  552  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  611

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  612  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  671

Query  661  SFITRNAKDVRFLDV  675
            +FITRNAKDVRFLDV
Sbjct  672  TFITRNAKDVRFLDV  686


>gi|334265280|gb|AEG75291.1| DNA gyrase beta subunit [Mycobacterium tuberculosis]
Length=686

 Score = 1382 bits (3577),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 674/675 (99%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  12   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  71

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  72   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  131

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  132  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  191

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  192  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  251

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  252  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  311

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  312  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  371

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  372  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  431

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  432  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  491

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  492  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  551

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  552  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  611

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  612  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  671

Query  661  SFITRNAKDVRFLDV  675
            SFITRNA+DVRFLDV
Sbjct  672  SFITRNARDVRFLDV  686


>gi|167969468|ref|ZP_02551745.1| DNA gyrase subunit B [Mycobacterium tuberculosis H37Ra]
 gi|254548933|ref|ZP_05139380.1| DNA gyrase subunit B [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|297632473|ref|ZP_06950253.1| DNA gyrase subunit B [Mycobacterium tuberculosis KZN 4207]
 7 more sequence titles
 Length=675

 Score = 1382 bits (3576),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 674/675 (99%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|31791182|ref|NP_853675.1| DNA gyrase subunit B [Mycobacterium bovis AF2122/97]
 gi|121635888|ref|YP_976111.1| DNA gyrase subunit B [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121635915|ref|YP_976138.1| DNA gyrase subunit B [Mycobacterium bovis BCG str. Pasteur 1173P2]
 12 more sequence titles
 Length=714

 Score = 1382 bits (3576),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 674/675 (99%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  40   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  99

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  100  YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  159

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  160  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  219

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  220  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  279

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  280  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  339

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  340  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  399

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTD+KVVVNKAVSSAQARIAA
Sbjct  400  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDSKVVVNKAVSSAQARIAA  459

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  460  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  519

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  520  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  579

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  580  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  639

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  640  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  699

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  700  SFITRNAKDVRFLDV  714


>gi|289441372|ref|ZP_06431116.1| DNA gyrase, B subunit [Mycobacterium tuberculosis T46]
 gi|289748467|ref|ZP_06507845.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis T92]
 gi|289756064|ref|ZP_06515442.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289414291|gb|EFD11531.1| DNA gyrase, B subunit [Mycobacterium tuberculosis T46]
 gi|289689054|gb|EFD56483.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis T92]
 gi|289696651|gb|EFD64080.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=714

 Score = 1381 bits (3574),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 674/675 (99%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  40   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  99

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  100  YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  159

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  160  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  219

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  220  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  279

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIA+QWNAGYSES
Sbjct  280  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAIQWNAGYSES  339

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  340  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  399

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  400  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  459

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  460  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  519

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  520  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  579

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  580  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  639

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  640  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  699

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  700  SFITRNAKDVRFLDV  714


>gi|334265282|gb|AEG75292.1| DNA gyrase beta subunit [Mycobacterium tuberculosis]
Length=686

 Score = 1380 bits (3573),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 674/675 (99%), Positives = 674/675 (99%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  12   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  71

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  72   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  131

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  132  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  191

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  192  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  251

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  252  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  311

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  312  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  371

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  372  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  431

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  432  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  491

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  492  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  551

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIEN HVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  552  STLLLTLLFRFMRPLIENRHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  611

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  612  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  671

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  672  SFITRNAKDVRFLDV  686


>gi|1107468|gb|AAA83016.1| gyrase B [Mycobacterium tuberculosis H37Rv]
Length=686

 Score = 1380 bits (3573),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 673/675 (99%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  12   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  71

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  72   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  131

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  132  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  191

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  192  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  251

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIA++WNAGYSES
Sbjct  252  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAIEWNAGYSES  311

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  312  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  371

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  372  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  431

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  432  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  491

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  492  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  551

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  552  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  611

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  612  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  671

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  672  SFITRNAKDVRFLDV  686


>gi|148821196|ref|YP_001285950.1| DNA gyrase subunit B [Mycobacterium tuberculosis F11]
 gi|148719723|gb|ABR04348.1| DNA gyrase subunit B gyrB [Mycobacterium tuberculosis F11]
Length=714

 Score = 1379 bits (3570),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 674/675 (99%), Positives = 674/675 (99%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  40   VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  99

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTVNVVLLEDGGVEVADDGRGIPVATHASGI TVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  100  YATTVNVVLLEDGGVEVADDGRGIPVATHASGILTVDVVMTQLHAGGKFDSDAYAISGGL  159

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
Sbjct  160  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  219

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
Sbjct  220  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  279

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
Sbjct  280  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  339

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
Sbjct  340  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  399

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
Sbjct  400  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  459

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  460  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  519

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
Sbjct  520  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  579

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  580  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  639

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  640  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  699

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  700  SFITRNAKDVRFLDV  714


>gi|240172095|ref|ZP_04750754.1| DNA gyrase subunit B [Mycobacterium kansasii ATCC 12478]
Length=675

 Score = 1290 bits (3337),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 656/675 (98%), Positives = 666/675 (99%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YA TV+VVLLEDGGVEVADDGRGIPVA HASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
Sbjct  61   YAATVSVVLLEDGGVEVADDGRGIPVAMHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLEVEIKRDG+EWSQVYEKSEP+GLKQGAPTKKTG+TVRFWADP VF
Sbjct  121  HGVGVSVVNALSTRLEVEIKRDGHEWSQVYEKSEPMGLKQGAPTKKTGTTVRFWADPNVF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETTEYDFETVARRLQEMAFLNKGLTINLTD+RVTQDEVVDEVVSDVAEAPKSASE+AAES
Sbjct  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDQRVTQDEVVDEVVSDVAEAPKSASEKAAES  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
             APHKVK RTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKG GHEVEIAMQWNAGYSES
Sbjct  241  AAPHKVKKRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGPGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLK+KDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKEKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP DAK VVNKAVSSAQARIAA
Sbjct  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPADAKTVVNKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI +LRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIARLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
Sbjct  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
Sbjct  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|296167139|ref|ZP_06849546.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycobacterium 
parascrofulaceum ATCC BAA-614]
 gi|295897461|gb|EFG77060.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycobacterium 
parascrofulaceum ATCC BAA-614]
Length=677

 Score = 1238 bits (3203),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 617/677 (92%), Positives = 646/677 (96%), Gaps = 2/677 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKKKAQDEYGA++IT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKKKAQDEYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YAT V+V LL+DG VEV DDGRGIPVA HA+G PTVDVVMTQLHAGGKF  ++  Y +SG
Sbjct  61   YATKVDVRLLDDGSVEVVDDGRGIPVAMHATGAPTVDVVMTQLHAGGKFGGENSGYTVSG  120

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTRLEV IKRDG+EW Q Y+++ P  LKQG  TKKTG+T+RFWADP 
Sbjct  121  GLHGVGVSVVNALSTRLEVTIKRDGHEWFQYYDRAVPGTLKQGEATKKTGTTIRFWADPE  180

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            +FETT+YDFETVARRLQEMAFLNKGLTINLTDERV QDEVVDEVVSD AEAPKSA E+AA
Sbjct  181  IFETTQYDFETVARRLQEMAFLNKGLTINLTDERVEQDEVVDEVVSDTAEAPKSAEEKAA  240

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ESTAPHKVK RTFHYPGGLVDFVKHINRTK+ I  S++DF GKGTGHEVEIAMQWN GYS
Sbjct  241  ESTAPHKVKHRTFHYPGGLVDFVKHINRTKSPIQQSVIDFDGKGTGHEVEIAMQWNGGYS  300

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  301  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  360

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKV+EPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP++AK VVNKAVSSAQARI
Sbjct  361  SVKVAEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPSEAKTVVNKAVSSAQARI  420

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  421  AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  480

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQ
Sbjct  481  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDITKLRYHKIVLMADADVDGQ  540

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR+DPEFAYSDRERDGLLEAGLKAG
Sbjct  541  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRTDPEFAYSDRERDGLLEAGLKAG  600

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  601  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  660

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  661  RRSFITRNAKDVRFLDV  677


>gi|41406103|ref|NP_958939.1| DNA gyrase subunit B [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118463778|ref|YP_879308.1| DNA gyrase subunit B [Mycobacterium avium 104]
 gi|254773058|ref|ZP_05214574.1| DNA gyrase subunit B [Mycobacterium avium subsp. avium ATCC 25291]
 gi|13431552|sp|Q9L7L3.1|GYRB_MYCPA RecName: Full=DNA gyrase subunit B
 gi|6969273|gb|AAF33694.1| putative gyrB [Mycobacterium avium subsp. paratuberculosis]
 gi|41394451|gb|AAS02322.1| GyrB [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118165065|gb|ABK65962.1| DNA gyrase, B subunit [Mycobacterium avium 104]
Length=677

 Score = 1233 bits (3191),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/677 (91%), Positives = 644/677 (96%), Gaps = 2/677 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKKKAQDEYGA++IT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKKKAQDEYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YA  V+V +L+DG VEVAD+GRGIPVA HA+G PTVDVVMTQLHAGGKF  ++  Y +SG
Sbjct  61   YADRVDVRILDDGSVEVADNGRGIPVAMHATGAPTVDVVMTQLHAGGKFGGENSGYNVSG  120

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTRLEV I RDGYEWSQ Y+ + P  LKQG  TK+TG+T+RFWADP 
Sbjct  121  GLHGVGVSVVNALSTRLEVNIARDGYEWSQYYDHAVPGTLKQGEATKRTGTTIRFWADPD  180

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            +FETTEYDFETVARRLQEMAFLNKGLTINLTDERVT +EVVDEVVSD A+APKSA E+AA
Sbjct  181  IFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTNEEVVDEVVSDTADAPKSAQEKAA  240

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ES APHKVK RTFHYPGGLVDFVKHINRTKN IH SI+DF GKG GHEVEIAMQWN GYS
Sbjct  241  ESAAPHKVKHRTFHYPGGLVDFVKHINRTKNPIHQSIIDFGGKGPGHEVEIAMQWNGGYS  300

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  301  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  360

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP DAKV+VNKAVSSAQARI
Sbjct  361  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPADAKVIVNKAVSSAQARI  420

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  421  AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  480

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQ
Sbjct  481  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDITKLRYHKIVLMADADVDGQ  540

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIE+GHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG
Sbjct  541  HISTLLLTLLFRFMRPLIEHGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  600

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINK+DGIQRYKGLGEMDAKELWETTMDP+VRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  601  KKINKDDGIQRYKGLGEMDAKELWETTMDPTVRVLRQVTLDDAAAADELFSILMGEDVDA  660

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  661  RRSFITRNAKDVRFLDV  677


>gi|336459820|gb|EGO38734.1| DNA gyrase, B subunit [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=677

 Score = 1232 bits (3187),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/677 (91%), Positives = 644/677 (96%), Gaps = 2/677 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKKKAQDEYGA++IT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKKKAQDEYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YA  V+V +L+DG VEVAD+GRGIPVA HA+G PTVDVVMTQLHAGGKF  ++  Y +SG
Sbjct  61   YADRVDVRILDDGSVEVADNGRGIPVAIHATGAPTVDVVMTQLHAGGKFGGENSGYNVSG  120

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTRLEV I RDGYEWSQ Y+ + P  LKQG  TK+TG+T+RFWADP 
Sbjct  121  GLHGVGVSVVNALSTRLEVNIARDGYEWSQYYDHAVPGTLKQGEVTKRTGTTIRFWADPD  180

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            +FETTEYDFETVARRLQEMAFLNKGLTINLTDERVT +EVVDEVVSD A+APKSA E+AA
Sbjct  181  IFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTNEEVVDEVVSDTADAPKSAQEKAA  240

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ES APHKVK RTFHYPGGLVDFVKHINRTKN IH SI+DF GKG GHEVEIAMQWN GYS
Sbjct  241  ESAAPHKVKHRTFHYPGGLVDFVKHINRTKNPIHQSIIDFGGKGPGHEVEIAMQWNGGYS  300

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  301  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  360

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP DAKV+VNKAVSSAQARI
Sbjct  361  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPADAKVIVNKAVSSAQARI  420

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  421  AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  480

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQ
Sbjct  481  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDITKLRYHKIVLMADADVDGQ  540

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIE+GHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG
Sbjct  541  HISTLLLTLLFRFMRPLIEHGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  600

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINK+DGIQRYKGLGEMDAKELWETTMDP+VRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  601  KKINKDDGIQRYKGLGEMDAKELWETTMDPTVRVLRQVTLDDAAAADELFSILMGEDVDA  660

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  661  RRSFITRNAKDVRFLDV  677


>gi|254820903|ref|ZP_05225904.1| DNA gyrase subunit B [Mycobacterium intracellulare ATCC 13950]
Length=677

 Score = 1229 bits (3181),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 613/677 (91%), Positives = 644/677 (96%), Gaps = 2/677 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKKKAQD+YGA++IT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKKKAQDDYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YA  V+V +L+DG VEVAD+GRGIPVA HA+G PTVDVVMTQLHAGGKF  ++  Y +SG
Sbjct  61   YANKVDVRILDDGSVEVADNGRGIPVAMHATGAPTVDVVMTQLHAGGKFGGENSGYNVSG  120

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTRLEV+I RDGYEWSQ Y+ + P  LKQG  TK+TG+T+RFWADP 
Sbjct  121  GLHGVGVSVVNALSTRLEVDIARDGYEWSQFYDHAVPGTLKQGEATKRTGTTIRFWADPD  180

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            +FETTEYDFETVARRLQEMAFLNKGLTINLTDERV+ +EVVDEVVSD A+APKSA E+AA
Sbjct  181  IFETTEYDFETVARRLQEMAFLNKGLTINLTDERVSNEEVVDEVVSDTADAPKSAQEKAA  240

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ESTAPHKVK RTFHYPGGLVDFVKHINRTK+ I  SI+DF GKG GHEVEIAMQWN GYS
Sbjct  241  ESTAPHKVKHRTFHYPGGLVDFVKHINRTKSPIQQSIIDFDGKGPGHEVEIAMQWNGGYS  300

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  301  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  360

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP DAKVVVNKAVSSAQARI
Sbjct  361  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPADAKVVVNKAVSSAQARI  420

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  421  AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  480

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQ
Sbjct  481  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDITKLRYHKIVLMADADVDGQ  540

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAG KAG
Sbjct  541  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGQKAG  600

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINK+DGIQRYKGLGEMDAKELWETTMDP+VRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  601  KKINKDDGIQRYKGLGEMDAKELWETTMDPTVRVLRQVTLDDAAAADELFSILMGEDVDA  660

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  661  RRSFITRNAKDVRFLDV  677


>gi|342862357|ref|ZP_08718998.1| DNA gyrase subunit B [Mycobacterium colombiense CECT 3035]
 gi|342130214|gb|EGT83542.1| DNA gyrase subunit B [Mycobacterium colombiense CECT 3035]
Length=677

 Score = 1226 bits (3172),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 610/677 (91%), Positives = 645/677 (96%), Gaps = 2/677 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKKKAQDEYGA++IT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKKKAQDEYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YA  V+V +L+DG VEV+D+GRGIPVA HA+G PTVDVVMTQLHAGGKF  ++  Y +SG
Sbjct  61   YADKVDVRILDDGSVEVSDNGRGIPVAMHATGAPTVDVVMTQLHAGGKFGGENSGYNVSG  120

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTRLEV+I RDG+EWSQ Y+++ P  LKQG  TK+TG+T+RFWADP 
Sbjct  121  GLHGVGVSVVNALSTRLEVDIARDGHEWSQYYDRAVPGTLKQGEATKRTGTTIRFWADPE  180

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            +FETTEYDFETVARRLQEMAFLNKGLTINLTDERV+ +EVVDEVVSD AEAPK+A E+AA
Sbjct  181  IFETTEYDFETVARRLQEMAFLNKGLTINLTDERVSNEEVVDEVVSDTAEAPKTAEEKAA  240

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ESTAPHKVK RTFHYPGGLVDFVKHINRTK+ I  SI+DF GKG GHEVEIAMQWN GYS
Sbjct  241  ESTAPHKVKHRTFHYPGGLVDFVKHINRTKSPIQQSIIDFDGKGPGHEVEIAMQWNGGYS  300

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALT+VVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  301  ESVHTFANTINTHEGGTHEEGFRSALTTVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  360

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP DAKVVVNKAVSSAQARI
Sbjct  361  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPADAKVVVNKAVSSAQARI  420

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  421  AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  480

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQ
Sbjct  481  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDITKLRYHKIVLMADADVDGQ  540

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIE+GHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAG KAG
Sbjct  541  HISTLLLTLLFRFMRPLIEHGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGQKAG  600

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINK+DGIQRYKGLGEMDAKELWETTMDP+VRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  601  KKINKDDGIQRYKGLGEMDAKELWETTMDPTVRVLRQVTLDDAAAADELFSILMGEDVDA  660

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  661  RRSFITRNAKDVRFLDV  677


>gi|169627114|ref|YP_001700763.1| DNA gyrase subunit B [Mycobacterium abscessus ATCC 19977]
 gi|169239081|emb|CAM60109.1| DNA gyrase (subunit B) GyrB (DNA topoisomerase) [Mycobacterium 
abscessus]
Length=675

 Score = 1226 bits (3172),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 603/675 (90%), Positives = 640/675 (95%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKK A+ EY A SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKKSAKSEYSADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YATTV V +L DGG++V DDGRGIPVA HASGIPTVDVVMTQLHAGGKFDSD+YA+SGGL
Sbjct  61   YATTVEVTMLADGGIQVKDDGRGIPVAMHASGIPTVDVVMTQLHAGGKFDSDSYAVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVG+SVVNALST+LEVEI RDG+EW QVY +SEP  L++GA TKKTG+TVRFWADP +F
Sbjct  121  HGVGISVVNALSTKLEVEILRDGFEWQQVYTRSEPGTLQKGAATKKTGTTVRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT YDFETVARRLQE AFLNKGLTI LTDERV+  EV DEVVSD AEAPK+A E+AAES
Sbjct  181  ETTTYDFETVARRLQEQAFLNKGLTIKLTDERVSDSEVTDEVVSDTAEAPKNAEEQAAES  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            +APHKVK+R FHYP GLVDFVKHINRTK+AIH++IVDFSGKG GHEVEIAMQWNAGYSES
Sbjct  241  SAPHKVKNRVFHYPDGLVDFVKHINRTKSAIHTTIVDFSGKGEGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALTSVVNKYAK++KLLK+KD NLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRAALTSVVNKYAKEKKLLKEKDSNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KV EPQFEGQTKTKLGNTEVKSFVQKVCNEQL HWF++NP DAK VVNKAVSSAQARIAA
Sbjct  361  KVGEPQFEGQTKTKLGNTEVKSFVQKVCNEQLQHWFDSNPADAKTVVNKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIAKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPL+E+GH+FLAQPPLYKLKWQR+ PEFAYSDRERDGL+EAGLKAGKK
Sbjct  541  STLLLTLLFRFMRPLVEHGHIFLAQPPLYKLKWQRTQPEFAYSDRERDGLMEAGLKAGKK  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INK+DGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INKDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|183980040|ref|YP_001848331.1| DNA gyrase (subunit B) GyrB [Mycobacterium marinum M]
 gi|183173366|gb|ACC38476.1| DNA gyrase (subunit B) GyrB [Mycobacterium marinum M]
Length=692

 Score = 1226 bits (3171),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 617/677 (92%), Positives = 651/677 (97%), Gaps = 2/677 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGA++IT+LEGLEAVRKRPGMYIGSTGERGLHHL+WEVVDN+VDEAMAG
Sbjct  16   VAAQKKKAQDEYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNSVDEAMAG  75

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YAT VNV LL+DG VEVAD+GRGIPVA HA+G PTVDVVMTQLHAGGKF  ++  Y +SG
Sbjct  76   YATQVNVRLLDDGSVEVADNGRGIPVAMHATGAPTVDVVMTQLHAGGKFGGENSGYNVSG  135

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTRLEV+IKRDGYEWSQ Y++++P  LKQG  TKKTG+T+RFWADP 
Sbjct  136  GLHGVGVSVVNALSTRLEVDIKRDGYEWSQFYDRAQPGTLKQGEATKKTGTTIRFWADPD  195

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            +FETTEYDFETVARRLQEMAFLNKGLTINLTDERVT DEVVD+VVSD AEAPKSA E+AA
Sbjct  196  IFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTPDEVVDDVVSDTAEAPKSAQEKAA  255

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ESTAPHKVKSRTFHYPGGLVDFVKHINRTK+ I  SIVDF GKG+GHEVEIAMQWN GYS
Sbjct  256  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKSPIQQSIVDFEGKGSGHEVEIAMQWNGGYS  315

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  316  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  375

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SV+V+EPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP++AK +VNKAVSSAQAR+
Sbjct  376  SVRVAEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPSEAKTIVNKAVSSAQARL  435

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  436  AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  495

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFD+ KLRYHKIVLMADADVDGQ
Sbjct  496  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDLSKLRYHKIVLMADADVDGQ  555

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR++PEFAYSDRERDGLLEAGLKAG
Sbjct  556  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRTEPEFAYSDRERDGLLEAGLKAG  615

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  616  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  675

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  676  RRSFITRNAKDVRFLDV  692


>gi|118615924|ref|YP_904256.1| DNA gyrase subunit B [Mycobacterium ulcerans Agy99]
 gi|118568034|gb|ABL02785.1| DNA gyrase (subunit B) GyrB [Mycobacterium ulcerans Agy99]
Length=692

 Score = 1223 bits (3165),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 616/677 (91%), Positives = 650/677 (97%), Gaps = 2/677 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQKKKAQDEYGA++IT+LEGLEAVRKRPGMYIGSTGERGLHHL+WEVVDN+VDEAMAG
Sbjct  16   VAAQKKKAQDEYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNSVDEAMAG  75

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YAT VNV LL+DG VEVAD+GRGIPVA HA+G PTVDVVMTQLHAGGKF  ++  Y +SG
Sbjct  76   YATQVNVRLLDDGSVEVADNGRGIPVAMHATGAPTVDVVMTQLHAGGKFGGENSGYNVSG  135

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTRLEV+IKRDGYEWSQ Y++++P  LKQG  TKKTG+ +RFWADP 
Sbjct  136  GLHGVGVSVVNALSTRLEVDIKRDGYEWSQFYDRAQPGTLKQGEATKKTGTAIRFWADPD  195

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            +FETTEYDFETVARRLQEMAFLNKGLTINLTDERVT DEVVD+VVSD AEAPKSA E+AA
Sbjct  196  IFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTPDEVVDDVVSDTAEAPKSAQEKAA  255

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ESTAPHKVKSRTFHYPGGLVDFVKHINRTK+ I  SIVDF GKG+GHEVEIAMQWN GYS
Sbjct  256  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKSPIQQSIVDFEGKGSGHEVEIAMQWNGGYS  315

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  316  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  375

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SV+V+EPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANP++AK +VNKAVSSAQAR+
Sbjct  376  SVRVAEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPSEAKTIVNKAVSSAQARL  435

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  436  AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  495

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFD+ KLRYHKIVLMADADVDGQ
Sbjct  496  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDLSKLRYHKIVLMADADVDGQ  555

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR++PEFAYSDRERDGLLEAGLKAG
Sbjct  556  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRTEPEFAYSDRERDGLLEAGLKAG  615

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  616  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  675

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  676  RRSFITRNAKDVRFLDV  692


>gi|108796987|ref|YP_637184.1| DNA gyrase subunit B [Mycobacterium sp. MCS]
 gi|119866071|ref|YP_936023.1| DNA gyrase subunit B [Mycobacterium sp. KMS]
 gi|126432619|ref|YP_001068310.1| DNA gyrase subunit B [Mycobacterium sp. JLS]
 gi|108767406|gb|ABG06128.1| DNA gyrase subunit B [Mycobacterium sp. MCS]
 gi|119692160|gb|ABL89233.1| DNA gyrase subunit B [Mycobacterium sp. KMS]
 gi|126232419|gb|ABN95819.1| DNA gyrase subunit B [Mycobacterium sp. JLS]
Length=675

 Score = 1189 bits (3076),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 589/675 (88%), Positives = 627/675 (93%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKK A  EYGA SI +LEGLEAVRKRPGMYIGSTGERGLHHL+WEVVDNAVDEAMAG
Sbjct  1    MAAQKKNAPAEYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V V +LE+GGV+V DDGRGIPVA H++GIPTVDVVMT LHAGGKF+  AY +SGGL
Sbjct  61   FATKVEVRILENGGVQVTDDGRGIPVAMHSTGIPTVDVVMTVLHAGGKFEEGAYQVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLE +I+ DGYEW Q Y++S P  LKQG  TKKTG+T+RFWADP +F
Sbjct  121  HGVGVSVVNALSTRLEADIRTDGYEWFQTYDRSVPGTLKQGEKTKKTGTTIRFWADPDIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT YDFET+ARRLQEMAFLNKGLTI LTDERVT +EVVD+VVSD AEAPKSA E++AE+
Sbjct  181  ETTSYDFETIARRLQEMAFLNKGLTIELTDERVTAEEVVDDVVSDHAEAPKSAEEKSAEA  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
              P KVK R FHYPGGLVDFVKHINRTK  I  S++DF GKG GHEVEIAMQWNAGYSES
Sbjct  241  AKPQKVKHRVFHYPGGLVDFVKHINRTKTPIQPSVIDFDGKGEGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRTALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVS+PQFEGQTKTKLGNTEVKSFVQK+CNEQL+HWFEANP +AK VVNKAVSSAQAR+AA
Sbjct  361  KVSQPQFEGQTKTKLGNTEVKSFVQKICNEQLSHWFEANPAEAKTVVNKAVSSAQARLAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PLIENGHVFLAQPPLYKLKWQRS PEFAYSDRERDGLLEAG  AGK+
Sbjct  541  STLLLTLLFRFMKPLIENGHVFLAQPPLYKLKWQRSTPEFAYSDRERDGLLEAGRAAGKR  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN +DGIQRYKGLGEMDAKELWETTMDPSVRVLRQ+TLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INADDGIQRYKGLGEMDAKELWETTMDPSVRVLRQITLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|269314031|gb|ACZ36917.1| DNA gyrase B [Mycobacterium massiliense]
Length=651

 Score = 1187 bits (3072),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 584/651 (90%), Positives = 618/651 (95%), Gaps = 0/651 (0%)

Query  12   YGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLE  71
            Y A SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAGYATTV V +L 
Sbjct  1    YSADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATTVEVTMLA  60

Query  72   DGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNAL  131
            DGG++V DDGRGIPVA HASGIPTVDVVMTQLHAGGKFDSD+YA+SGGLHGVG+SVVNAL
Sbjct  61   DGGIQVKDDGRGIPVAMHASGIPTVDVVMTQLHAGGKFDSDSYAVSGGLHGVGISVVNAL  120

Query  132  STRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVA  191
            ST+LEVEI RDG+EW QVY +SEP  L++GA TKKTG+TVRFWADP +FETT YDFETVA
Sbjct  121  STKLEVEILRDGFEWQQVYTRSEPGTLQKGAATKKTGTTVRFWADPEIFETTTYDFETVA  180

Query  192  RRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTF  251
            RRLQE AFLNKGLTI LTDERV+  EV DEVVSD AEAPK+A E+AAES+APHKVK+R F
Sbjct  181  RRLQEQAFLNKGLTIKLTDERVSDSEVTDEVVSDTAEAPKNAEEQAAESSAPHKVKNRVF  240

Query  252  HYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTH  311
            HYP GLVDFVKHINRTK+AIH++IVDFSGKG GHEVEIAMQWNAGYSESVHTFANTINTH
Sbjct  241  HYPDGLVDFVKHINRTKSAIHTTIVDFSGKGEGHEVEIAMQWNAGYSESVHTFANTINTH  300

Query  312  EGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQT  371
            EGGTHEEGFR+ALTSVVNKYAK++KLLK+KD NLTGDDIREGLAAVISVKV EPQFEGQT
Sbjct  301  EGGTHEEGFRAALTSVVNKYAKEKKLLKEKDSNLTGDDIREGLAAVISVKVGEPQFEGQT  360

Query  372  KTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVRRKS  431
            KTKLGNTEVKSFVQKVCNEQL HWF++NP DAK VVNKAVSSAQARIAARKARELVRRKS
Sbjct  361  KTKLGNTEVKSFVQKVCNEQLQHWFDSNPADAKTVVNKAVSSAQARIAARKARELVRRKS  420

Query  432  ATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  491
            ATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA
Sbjct  421  ATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  480

Query  492  RIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRF  551
            RIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHISTLLLTLLFRF
Sbjct  481  RIDRVLKNTEVQAIITALGTGIHDEFDIAKLRYHKIVLMADADVDGQHISTLLLTLLFRF  540

Query  552  MRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYK  611
            MRPL+E+GH+FLAQPPLYKLKWQRS PEFAYSDRERDGL+EAGLKAGKKINK+DGIQRYK
Sbjct  541  MRPLVEHGHIFLAQPPLYKLKWQRSQPEFAYSDRERDGLMEAGLKAGKKINKDDGIQRYK  600

Query  612  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSF  662
            GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARRSF
Sbjct  601  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARRSF  651


>gi|269314033|gb|ACZ36918.1| DNA gyrase B [Mycobacterium bolletii]
 gi|269314039|gb|ACZ36921.1| DNA gyrase B [Mycobacterium massiliense]
Length=651

 Score = 1187 bits (3071),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 583/651 (90%), Positives = 618/651 (95%), Gaps = 0/651 (0%)

Query  12   YGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLE  71
            Y A SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAGYATTV V +L 
Sbjct  1    YSADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATTVEVTMLA  60

Query  72   DGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNAL  131
            DGG++V DDGRGIPVA HASGIPTVDVVMTQLHAGGKFDSD+YA+SGGLHGVG+SVVNAL
Sbjct  61   DGGIQVKDDGRGIPVAMHASGIPTVDVVMTQLHAGGKFDSDSYAVSGGLHGVGISVVNAL  120

Query  132  STRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVA  191
            ST+LEVEI RDG+EW QVY +SEP  L++GA TKKTG+TVRFWADP +FETT YDFETVA
Sbjct  121  STKLEVEILRDGFEWQQVYTRSEPGTLQKGAATKKTGTTVRFWADPEIFETTTYDFETVA  180

Query  192  RRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTF  251
            RRLQE AFLNKGLTI LTDERV+  EV DEVVSD AEAPK+A E+AAES+APHKVK+R F
Sbjct  181  RRLQEQAFLNKGLTIKLTDERVSDSEVTDEVVSDTAEAPKNAEEQAAESSAPHKVKNRVF  240

Query  252  HYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTH  311
            HYP GLVDFVKHINRTK+AIH++IVDFSGKG GHEVEIAMQWNAGYSESVHTFANTINTH
Sbjct  241  HYPDGLVDFVKHINRTKSAIHTTIVDFSGKGEGHEVEIAMQWNAGYSESVHTFANTINTH  300

Query  312  EGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQT  371
            EGGTHEEGFR+ALTSVVNKYAK++KLLK+KD NLTGDDIREGLAAVISVKV EPQFEGQT
Sbjct  301  EGGTHEEGFRAALTSVVNKYAKEKKLLKEKDSNLTGDDIREGLAAVISVKVGEPQFEGQT  360

Query  372  KTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVRRKS  431
            KTKLGNTEVKSFVQKVCNEQL HWF++NP DAK VVNKAVSSAQARIAARKARELVRRKS
Sbjct  361  KTKLGNTEVKSFVQKVCNEQLQHWFDSNPADAKTVVNKAVSSAQARIAARKARELVRRKS  420

Query  432  ATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  491
            ATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA
Sbjct  421  ATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  480

Query  492  RIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRF  551
            RIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHISTLLLTLLFRF
Sbjct  481  RIDRVLKNTEVQAIITALGTGIHDEFDIAKLRYHKIVLMADADVDGQHISTLLLTLLFRF  540

Query  552  MRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYK  611
            MRPL+E+GH+FLAQPPLYKLKWQR+ PEFAYSDRERDGL+EAGLKAGKKINK+DGIQRYK
Sbjct  541  MRPLVEHGHIFLAQPPLYKLKWQRTQPEFAYSDRERDGLMEAGLKAGKKINKDDGIQRYK  600

Query  612  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSF  662
            GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARRSF
Sbjct  601  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARRSF  651


>gi|7437446|pir||S70991 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) chain B - Mycobacterium 
smegmatis
 gi|1321898|emb|CAA63253.1| gyrB [Mycobacterium smegmatis]
Length=706

 Score = 1185 bits (3066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 589/675 (88%), Positives = 626/675 (93%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQK  A  EYGA SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  32   VAAQKNNAPKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  91

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V+V +  DG VEV DDGRGIPV  HA+G+PT+DVVMTQLHAGGKFD + YA+SGGL
Sbjct  92   FATRVDVKIHADGSVEVRDDGRGIPVEMHATGMPTIDVVMTQLHAGGKFDGETYAVSGGL  151

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLE  + RDGYEW Q Y++S P  LKQG  TK+TG+T+RFWADP +F
Sbjct  152  HGVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGGETKETGTTIRFWADPEIF  211

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT+Y+FETVARRLQEMAFLNKGLTI LTDERVT +EVVD+VV D AEAPK+A E+AAE+
Sbjct  212  ETTDYNFETVARRLQEMAFLNKGLTIELTDERVTAEEVVDDVVKDTAEAPKTADEKAAEA  271

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            T P KVK R FHYPGGLVD+VKHINRTK  I  SI+DF GKG GHEVEIAMQWNAGYSES
Sbjct  272  TGPSKVKHRVFHYPGGLVDYVKHINRTKTPIQQSIIDFDGKGPGHEVEIAMQWNAGYSES  331

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALTSVVN+YAKD+KLLKDKDPNLTGDDIREGLAAVISV
Sbjct  332  VHTFANTINTHEGGTHEEGFRAALTSVVNRYAKDKKLLKDKDPNLTGDDIREGLAAVISV  391

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KV+EPQFEGQTKTKLGNTEVKSFVQK+CNEQL HWFEANP +AK VVNKAVSSAQARIAA
Sbjct  392  KVAEPQFEGQTKTKLGNTEVKSFVQKICNEQLQHWFEANPAEAKTVVNKAVSSAQARIAA  451

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  452  RKARELVRRKSATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP  511

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQ+IITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  512  LRGKIINVEKARIDRVLKNTEVQSIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  571

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PL+ENGH+FLAQPPLYKLKWQRS+PEFAYSDRERDGLLEAG  AGKK
Sbjct  572  STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRSEPEFAYSDRERDGLLEAGRAAGKK  631

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN +DGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  632  INVDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  691

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  692  SFITRNAKDVRFLDV  706


>gi|118470567|ref|YP_884428.1| DNA gyrase subunit B [Mycobacterium smegmatis str. MC2 155]
 gi|152032506|sp|A0QNE0.1|GYRB_MYCS2 RecName: Full=DNA gyrase subunit B
 gi|152032507|sp|P0C559.1|GYRB_MYCSM RecName: Full=DNA gyrase subunit B
 gi|118171854|gb|ABK72750.1| DNA gyrase, B subunit [Mycobacterium smegmatis str. MC2 155]
Length=675

 Score = 1185 bits (3065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 588/675 (88%), Positives = 626/675 (93%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQK  A  EYGA SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKNNAPKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V+V +  DG VEV DDGRGIPV  HA+G+PT+DVVMTQLHAGGKFD + YA+SGGL
Sbjct  61   FATRVDVKIHADGSVEVRDDGRGIPVEMHATGMPTIDVVMTQLHAGGKFDGETYAVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLE  + RDGYEW Q Y++S P  LKQG  TK+TG+T+RFWADP +F
Sbjct  121  HGVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGGETKETGTTIRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT+Y+FETVARRLQEMAFLNKGLTI LTDERVT +EVVD+VV D AEAPK+A E+AAE+
Sbjct  181  ETTDYNFETVARRLQEMAFLNKGLTIELTDERVTAEEVVDDVVKDTAEAPKTADEKAAEA  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            T P KVK R FHYPGGLVD+VKHINRTK  I  SI+DF GKG GHEVEIAMQWNAGYSES
Sbjct  241  TGPSKVKHRVFHYPGGLVDYVKHINRTKTPIQQSIIDFDGKGPGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALTSVVN+YAKD+KLLKDKDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRAALTSVVNRYAKDKKLLKDKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KV+EPQFEGQTKTKLGNTEVKSFVQK+CNEQL HWFEANP +AK VVNKAVSSAQARIAA
Sbjct  361  KVAEPQFEGQTKTKLGNTEVKSFVQKICNEQLQHWFEANPAEAKTVVNKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQ+IITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQSIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PL+ENGH+FLAQPPLYKLKWQRS+PEFAYSDRERDGLLEAG  AGKK
Sbjct  541  STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRSEPEFAYSDRERDGLLEAGRAAGKK  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN +DGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INVDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|1226021|emb|CAA58884.1| DNA gyrase [Mycobacterium smegmatis]
Length=675

 Score = 1184 bits (3064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 588/675 (88%), Positives = 626/675 (93%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQK  A  EYGA SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKNNAPKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V+V +  DG VEV DDGRGIPV  HA+G+PT+DVVMTQLHAGGKFD + YA+SGGL
Sbjct  61   FATRVDVKIHADGSVEVRDDGRGIPVEMHATGMPTIDVVMTQLHAGGKFDGETYAVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLE  + RDGYEW Q Y++S P  LKQG  TK+TG+T+RFWADP +F
Sbjct  121  HGVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGRETKETGTTIRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT+Y+FETVARRLQEMAFLNKGLTI LTDERVT +EVVD+VV D AEAPK+A E+AAE+
Sbjct  181  ETTDYNFETVARRLQEMAFLNKGLTIELTDERVTAEEVVDDVVKDTAEAPKTADEKAAEA  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            T P KVK R FHYPGGLVD+VKHINRTK  I  SI+DF GKG GHEVEIAMQWNAGYSES
Sbjct  241  TGPSKVKHRVFHYPGGLVDYVKHINRTKTPIQQSIIDFDGKGPGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALTSVVN+YAKD+KLLKDKDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRAALTSVVNRYAKDKKLLKDKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KV+EPQFEGQTKTKLGNTEVKSFVQK+CNEQL HWFEANP +AK VVNKAVSSAQARIAA
Sbjct  361  KVAEPQFEGQTKTKLGNTEVKSFVQKICNEQLQHWFEANPAEAKTVVNKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQ+IITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQSIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PL+ENGH+FLAQPPLYKLKWQRS+PEFAYSDRERDGLLEAG  AGKK
Sbjct  541  STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRSEPEFAYSDRERDGLLEAGRAAGKK  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN +DGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INVDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|1213062|emb|CAA63917.1| DNA gyrase subunit B [Mycobacterium smegmatis str. MC2 155]
Length=675

 Score = 1181 bits (3054),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 586/675 (87%), Positives = 624/675 (93%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQK  A  EYGA SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKNNAPKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V+V +  DG VEV DDGRGIPV  HA+G+PT+DVVMTQLHAGGKFD + YA+SGGL
Sbjct  61   FATRVDVKIHADGSVEVRDDGRGIPVEMHATGMPTIDVVMTQLHAGGKFDGETYAVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLE  + RDGYEW Q Y++S P  LKQG  TK+TG+T+RFWADP +F
Sbjct  121  HGVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGGETKETGTTIRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT+Y+FETVARRLQEMAFLNKGLTI LTDERVT +EVVD+VV D AEAPK+A E+AAE+
Sbjct  181  ETTDYNFETVARRLQEMAFLNKGLTIELTDERVTAEEVVDDVVKDTAEAPKTADEKAAEA  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            T P KVK R FHYPGGLVD+VKHINRTK  I  SI+DF GKG GHEVEIAMQWNAGYSES
Sbjct  241  TGPSKVKHRVFHYPGGLVDYVKHINRTKTPIQQSIIDFDGKGPGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALTSVVN+YAKD+KLLKDKDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRAALTSVVNRYAKDKKLLKDKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KV+EPQFEGQTKTKLGNTEVKSFVQK+CNEQL HWFEANP +AK VVNKAVSSAQARIAA
Sbjct  361  KVAEPQFEGQTKTKLGNTEVKSFVQKICNEQLQHWFEANPAEAKTVVNKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGK ADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKSADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQ+II ALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQSIIRALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PL+ENGH+FLAQPPLYKLKWQRS+PEFAYSDRERDGLLEAG  AGKK
Sbjct  541  STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRSEPEFAYSDRERDGLLEAGRAAGKK  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN +DGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INVDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|7437456|pir||T10005 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) - Mycobacterium 
leprae
 gi|1262356|emb|CAA94712.1| DNA gyrase B [Mycobacterium leprae]
Length=697

 Score = 1170 bits (3027),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 596/679 (88%), Positives = 631/679 (93%), Gaps = 5/679 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            VAAQ+K AQDEYGAASITILEGLEAVRKRPGMY+GSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  20   VAAQRK-AQDEYGAASITILEGLEAVRKRPGMYVGSTGERGLHHLIWEVVDNSVDEAMAG  78

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISG  118
            YAT V+V L +DG VEVAD+GRGIPVA HA+G+PTVDVVMTQLHAGGKF      Y +SG
Sbjct  79   YATQVDVRLFDDGSVEVADNGRGIPVAVHATGVPTVDVVMTQLHAGGKFGGKDSGYNVSG  138

Query  119  GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPA  178
            GLHGVGVSVVNALSTR+EV+IKRDGYEWSQ Y+K+ P  LKQG  T+ TG+T+RFWADP 
Sbjct  139  GLHGVGVSVVNALSTRVEVDIKRDGYEWSQFYDKAVPGILKQGEATEATGTTIRFWADPD  198

Query  179  VFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAP--KSASER  236
            +FETT+YDF TVARR+QE+AFLNKGLTINL DERV QDEVVD+VVSD AEAP   +  E+
Sbjct  199  IFETTKYDFGTVARRIQEVAFLNKGLTINLVDERVKQDEVVDDVVSDTAEAPVAMTVEEK  258

Query  237  AAESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAG  296
            + ES+APHKV+ RTFHYPGGLVDFVKHINRTK  I  SI+DF GKG GHEVE+AMQWN G
Sbjct  259  STESSAPHKVRHRTFHYPGGLVDFVKHINRTKTPIQQSIIDFDGKGAGHEVEVAMQWNGG  318

Query  297  YSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAA  356
            YSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAA
Sbjct  319  YSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAA  378

Query  357  VISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQA  416
            VISVKVSEPQFEGQTKTKLGNTEVKSFVQ+VCNEQL HWFEANP DAK VVNKA+SSAQA
Sbjct  379  VISVKVSEPQFEGQTKTKLGNTEVKSFVQRVCNEQLIHWFEANPVDAKAVVNKAISSAQA  438

Query  417  RIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQ  476
            RIAARKARELVRRKSATD+GGLPGKLADCRSTDPR SELYVVEGDSAGGSAKSGRDSMFQ
Sbjct  439  RIAARKARELVRRKSATDLGGLPGKLADCRSTDPRSSELYVVEGDSAGGSAKSGRDSMFQ  498

Query  477  AILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVD  536
            AILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI +LRYHKIVLMADADVD
Sbjct  499  AILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDISRLRYHKIVLMADADVD  558

Query  537  GQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLK  596
            GQHISTLLLTLLFRFMRPLIE+G+VFLAQPPLYKLKWQR DPEFAYSD ERDGLLE GLK
Sbjct  559  GQHISTLLLTLLFRFMRPLIEHGYVFLAQPPLYKLKWQRMDPEFAYSDSERDGLLETGLK  618

Query  597  AGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV  656
             GKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV
Sbjct  619  LGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV  678

Query  657  DARRSFITRNAKDVRFLDV  675
            DARRSFITRNAKDVRFLDV
Sbjct  679  DARRSFITRNAKDVRFLDV  697


>gi|145221416|ref|YP_001132094.1| DNA gyrase subunit B [Mycobacterium gilvum PYR-GCK]
 gi|145213902|gb|ABP43306.1| DNA gyrase subunit B [Mycobacterium gilvum PYR-GCK]
Length=675

 Score = 1169 bits (3025),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 584/675 (87%), Positives = 631/675 (94%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKK A  EYGA SI +LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKKNAPSEYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V+V +LEDGGV+V DDGRGIPVA H++GIPT+DVVMT LHAGGKF+  AY +SGGL
Sbjct  61   FATKVDVRILEDGGVQVTDDGRGIPVAMHSTGIPTIDVVMTVLHAGGKFEEGAYQVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALS+RLE ++++DG+EW Q Y++S P  L++G PT KTG+T+RFWADP +F
Sbjct  121  HGVGVSVVNALSSRLEADVRKDGHEWFQTYDRSVPGTLRKGDPTDKTGTTIRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT YDFET+ARRLQEMAFLNKGLTI LTDERV  +EVVD+VVSD AEAPKSA E+AAE+
Sbjct  181  ETTNYDFETIARRLQEMAFLNKGLTIELTDERVAPEEVVDDVVSDHAEAPKSAEEKAAEA  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            +AP KVK R FHYPGGLVDFVKHINRTK AI  S++DF GKG GHEVEIAMQWNAGYSES
Sbjct  241  SAPQKVKHRVFHYPGGLVDFVKHINRTKTAIQPSVIDFDGKGEGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALT+VVNKYAKD+KLLK+KDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVS+PQFEGQTKTKLGNTEVKSFVQK+CNEQL HWFE+NP +AK V+NKAVSSAQARIAA
Sbjct  361  KVSQPQFEGQTKTKLGNTEVKSFVQKICNEQLNHWFESNPAEAKTVINKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPTKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PL+ENGH+FLAQPPLYKLKWQR+DPEFAYSDRERDGLLEAG  AGK+
Sbjct  541  STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRTDPEFAYSDRERDGLLEAGRAAGKR  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN EDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INVEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|15826870|ref|NP_301133.1| DNA gyrase subunit B [Mycobacterium leprae TN]
 gi|221229348|ref|YP_002502764.1| DNA gyrase subunit B [Mycobacterium leprae Br4923]
 gi|13638292|sp|Q59533.2|GYRB_MYCLE RecName: Full=DNA gyrase subunit B
 gi|13092417|emb|CAC29513.1| putative DNA gyrase subunit B [Mycobacterium leprae]
 gi|219932455|emb|CAR70098.1| putative DNA gyrase subunit B [Mycobacterium leprae Br4923]
Length=678

 Score = 1169 bits (3024),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/677 (88%), Positives = 629/677 (93%), Gaps = 4/677 (0%)

Query  3    AQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYA  62
            A ++KAQDEYGAASITILEGLEAVRKRPGMY+GSTGERGLHHLIWEVVDN+VDEAMAGYA
Sbjct  2    AAQRKAQDEYGAASITILEGLEAVRKRPGMYVGSTGERGLHHLIWEVVDNSVDEAMAGYA  61

Query  63   TTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKF--DSDAYAISGGL  120
            T V+V L +DG VEVAD+GRGIPVA HA+G+PTVDVVMTQLHAGGKF      Y +SGGL
Sbjct  62   TQVDVRLFDDGSVEVADNGRGIPVAVHATGVPTVDVVMTQLHAGGKFGGKDSGYNVSGGL  121

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTR+EV+IKRDGYEWSQ Y+K+ P  LKQG  T+ TG+T+RFWADP +F
Sbjct  122  HGVGVSVVNALSTRVEVDIKRDGYEWSQFYDKAVPGILKQGEATEATGTTIRFWADPDIF  181

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAP--KSASERAA  238
            ETT+YDF TVARR+QE+AFLNKGLTINL DERV QDEVVD+VVSD AEAP   +  E++ 
Sbjct  182  ETTKYDFGTVARRIQEVAFLNKGLTINLVDERVKQDEVVDDVVSDTAEAPVAMTVEEKST  241

Query  239  ESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
            ES+APHKV+ RTFHYPGGLVDFVKHINRTK  I  SI+DF GKG GHEVE+AMQWN GYS
Sbjct  242  ESSAPHKVRHRTFHYPGGLVDFVKHINRTKTPIQQSIIDFDGKGAGHEVEVAMQWNGGYS  301

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVI
Sbjct  302  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI  361

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKVSEPQFEGQTKTKLGNTEVKSFVQ+VCNEQL HWFEANP DAK VVNKA+SSAQARI
Sbjct  362  SVKVSEPQFEGQTKTKLGNTEVKSFVQRVCNEQLIHWFEANPVDAKAVVNKAISSAQARI  421

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATD+GGLPGKLADCRSTDPR SELYVVEGDSAGGSAKSGRDSMFQAI
Sbjct  422  AARKARELVRRKSATDLGGLPGKLADCRSTDPRSSELYVVEGDSAGGSAKSGRDSMFQAI  481

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI +LRYHKIVLMADADVDGQ
Sbjct  482  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDISRLRYHKIVLMADADVDGQ  541

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG  598
            HISTLLLTLLFRFMRPLIE+G+VFLAQPPLYKLKWQR DPEFAYSD ERDGLLE GLK G
Sbjct  542  HISTLLLTLLFRFMRPLIEHGYVFLAQPPLYKLKWQRMDPEFAYSDSERDGLLETGLKLG  601

Query  599  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  658
            KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA
Sbjct  602  KKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDA  661

Query  659  RRSFITRNAKDVRFLDV  675
            RRSFITRNAKDVRFLDV
Sbjct  662  RRSFITRNAKDVRFLDV  678


>gi|315441702|ref|YP_004074581.1| DNA gyrase subunit B [Mycobacterium sp. Spyr1]
 gi|315260005|gb|ADT96746.1| DNA gyrase subunit B [Mycobacterium sp. Spyr1]
Length=675

 Score = 1168 bits (3022),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 583/675 (87%), Positives = 631/675 (94%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKK A  EYGA SI +LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKKNAPSEYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V+V +LEDGGV+V DDGRGIPV+ H++GIPT+DVVMT LHAGGKF+  AY +SGGL
Sbjct  61   FATKVDVRILEDGGVQVTDDGRGIPVSMHSTGIPTIDVVMTVLHAGGKFEEGAYQVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALS+RLE ++++DG+EW Q Y++S P  L++G PT KTG+T+RFWADP +F
Sbjct  121  HGVGVSVVNALSSRLEADVRKDGHEWFQTYDRSVPGTLRKGDPTDKTGTTIRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT YDFET+ARRLQEMAFLNKGLTI LTDERV  +EVVD+VVSD AEAPKSA E+AAE+
Sbjct  181  ETTNYDFETIARRLQEMAFLNKGLTIELTDERVAPEEVVDDVVSDHAEAPKSAEEKAAEA  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
            +AP KVK R FHYPGGLVDFVKHINRTK AI  S++DF GKG GHEVEIAMQWNAGYSES
Sbjct  241  SAPQKVKHRVFHYPGGLVDFVKHINRTKTAIQPSVIDFDGKGEGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALT+VVNKYAKD+KLLK+KDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVS+PQFEGQTKTKLGNTEVKSFVQK+CNEQL HWFE+NP +AK V+NKAVSSAQARIAA
Sbjct  361  KVSQPQFEGQTKTKLGNTEVKSFVQKICNEQLNHWFESNPAEAKTVINKAVSSAQARIAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPTKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PL+ENGH+FLAQPPLYKLKWQR+DPEFAYSDRERDGLLEAG  AGK+
Sbjct  541  STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRTDPEFAYSDRERDGLLEAGRAAGKR  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN EDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INVEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|269314035|gb|ACZ36919.1| DNA gyrase B [Mycobacterium chelonae]
Length=651

 Score = 1165 bits (3015),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 581/651 (90%), Positives = 616/651 (95%), Gaps = 0/651 (0%)

Query  12   YGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLE  71
            Y A SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAGYATTV V +LE
Sbjct  1    YSADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATTVEVTMLE  60

Query  72   DGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNAL  131
            DGG++V DDGRGIPVA HASGIPTVDVVMTQLHAGGKFDSD+YA+SGGLHGVG+SVVNAL
Sbjct  61   DGGIQVKDDGRGIPVAMHASGIPTVDVVMTQLHAGGKFDSDSYAVSGGLHGVGISVVNAL  120

Query  132  STRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVA  191
            ST++E+EI RDG+EW QVY  S P  L+QGA TKKTG+TVRFWADP +FETT YDFETVA
Sbjct  121  STKVELEILRDGHEWQQVYTASVPGTLQQGAATKKTGTTVRFWADPEIFETTTYDFETVA  180

Query  192  RRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTF  251
            RRLQE AFLNKGLTI LTDERV+  +V DEVVSD AEAPK+A E+AAES APHKVK+R F
Sbjct  181  RRLQEQAFLNKGLTIKLTDERVSNADVTDEVVSDTAEAPKTAEEQAAESAAPHKVKNRVF  240

Query  252  HYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTH  311
            HYP GLVDFVKHINRTK+AIH++IVDFSGKG GHEVEIAMQWNAGYSESVHTFANTINTH
Sbjct  241  HYPDGLVDFVKHINRTKSAIHTTIVDFSGKGEGHEVEIAMQWNAGYSESVHTFANTINTH  300

Query  312  EGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQT  371
            EGGTHEEGFR+ALT+VVNKYAK++KLLK+KD NLTGDDIREGLAAVISVKV EPQFEGQT
Sbjct  301  EGGTHEEGFRAALTTVVNKYAKEKKLLKEKDTNLTGDDIREGLAAVISVKVGEPQFEGQT  360

Query  372  KTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVRRKS  431
            KTKLGNTEVKSFVQKVCNEQL HWF++NP DAK VVNKAVSSAQARIAARKARELVRRKS
Sbjct  361  KTKLGNTEVKSFVQKVCNEQLQHWFDSNPADAKTVVNKAVSSAQARIAARKARELVRRKS  420

Query  432  ATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  491
            ATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA
Sbjct  421  ATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  480

Query  492  RIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRF  551
            RIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHISTLLLTLLFRF
Sbjct  481  RIDRVLKNTEVQAIITALGTGIHDEFDIAKLRYHKIVLMADADVDGQHISTLLLTLLFRF  540

Query  552  MRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYK  611
            MRPL+E+GH+FLAQPPLYKLKWQRS PEFAYSDRERDGL+EAGLKAGKKINK+DGIQRYK
Sbjct  541  MRPLVEHGHIFLAQPPLYKLKWQRSQPEFAYSDRERDGLMEAGLKAGKKINKDDGIQRYK  600

Query  612  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSF  662
            GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARRSF
Sbjct  601  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARRSF  651


>gi|120401034|ref|YP_950863.1| DNA gyrase subunit B [Mycobacterium vanbaalenii PYR-1]
 gi|119953852|gb|ABM10857.1| DNA gyrase subunit B [Mycobacterium vanbaalenii PYR-1]
Length=675

 Score = 1162 bits (3005),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 592/675 (88%), Positives = 629/675 (94%), Gaps = 0/675 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQKK A  EYGA SI +LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
Sbjct  1    MAAQKKNAPAEYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            +AT V+V +LEDGGV+V DDGRGIPVA H++GIPTVDVVMT LHAGGKF+  AY +SGGL
Sbjct  61   FATKVDVRILEDGGVQVTDDGRGIPVAMHSTGIPTVDVVMTVLHAGGKFEEGAYQVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVGVSVVNALSTRLE +I++DGYEW Q Y++S P  LKQG  +K TG+T+RFWADP +F
Sbjct  121  HGVGVSVVNALSTRLEADIRKDGYEWHQTYDRSVPGTLKQGEKSKDTGTTIRFWADPDIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT YDFET+ARRLQEMAFLNKGLTI LTDERVT  +VVD+VVSD AEAPKSA E+AAE+
Sbjct  181  ETTNYDFETIARRLQEMAFLNKGLTIELTDERVTPADVVDDVVSDHAEAPKSAEEKAAEA  240

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
             AP KVK R FHYPGGLVDFVKHINRTK  I  SI+DF GKG GHEVEIAMQWNAGYSES
Sbjct  241  AAPQKVKHRVFHYPGGLVDFVKHINRTKTPIQPSIIDFDGKGEGHEVEIAMQWNAGYSES  300

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            VHTFANTINTHEGGTHEEGFR+ALTSVVNKYAKD+KLLKDKDPNLTGDDIREGLAAVISV
Sbjct  301  VHTFANTINTHEGGTHEEGFRAALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVISV  360

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            KVS+PQFEGQTKTKLGNTEVKSFVQK+CNEQL+HWFEANP +AK VVNKAVSSAQAR+AA
Sbjct  361  KVSQPQFEGQTKTKLGNTEVKSFVQKICNEQLSHWFEANPAEAKTVVNKAVSSAQARMAA  420

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            RKARELVRRKSATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILP
Sbjct  421  RKARELVRRKSATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP  480

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHI
Sbjct  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI  540

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFM+PL+ENGH+FLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAG  AGK+
Sbjct  541  STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGRAAGKR  600

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            IN EDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARR
Sbjct  601  INVEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR  660

Query  661  SFITRNAKDVRFLDV  675
            SFITRNAKDVRFLDV
Sbjct  661  SFITRNAKDVRFLDV  675


>gi|269314037|gb|ACZ36920.1| DNA gyrase B [Mycobacterium immunogenum]
Length=651

 Score = 1161 bits (3003),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 579/651 (89%), Positives = 614/651 (95%), Gaps = 0/651 (0%)

Query  12   YGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLE  71
            Y A SITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAGYATTV V +L 
Sbjct  1    YSADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATTVEVTMLA  60

Query  72   DGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNAL  131
            DGG++V DDGRGIPVA HASGIPTVDVVMTQLHAGGKFDSD+YA+SGGLHGVG+SVVNAL
Sbjct  61   DGGIQVKDDGRGIPVAMHASGIPTVDVVMTQLHAGGKFDSDSYAVSGGLHGVGISVVNAL  120

Query  132  STRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVA  191
            ST++E+EI RDG+EW+QVY  S P  L+QG  TKKTG+TVRFWADP +FETT YDFETVA
Sbjct  121  STKVELEILRDGHEWNQVYTASVPGTLQQGGATKKTGTTVRFWADPEIFETTTYDFETVA  180

Query  192  RRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTF  251
            RRLQE AFLNKGLTI LTDERV+  +V DEVV D AEAPK+A E+AAES APHKVK+R F
Sbjct  181  RRLQEQAFLNKGLTIKLTDERVSDSDVTDEVVRDTAEAPKTAEEQAAESAAPHKVKNRVF  240

Query  252  HYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTH  311
            HYP GLVDFVKHINRTK+AIH++IVDFSGKG GHEVEIAMQWNAGYSESVHTFANTINTH
Sbjct  241  HYPDGLVDFVKHINRTKSAIHTTIVDFSGKGEGHEVEIAMQWNAGYSESVHTFANTINTH  300

Query  312  EGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQT  371
            EGGTHEEGFR+ALTSVVNKYAK++KLLK+KD NLTGDDIREGLAAVISVKV EPQFEGQT
Sbjct  301  EGGTHEEGFRAALTSVVNKYAKEKKLLKEKDSNLTGDDIREGLAAVISVKVGEPQFEGQT  360

Query  372  KTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVRRKS  431
            KTKLGNTEVKSFVQKVCNEQL HWF++NP DAK VVNKAVSSAQARIAARKARELVRRKS
Sbjct  361  KTKLGNTEVKSFVQKVCNEQLQHWFDSNPADAKTVVNKAVSSAQARIAARKARELVRRKS  420

Query  432  ATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  491
            ATDIGGLPGKLADCRSTDP KSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA
Sbjct  421  ATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  480

Query  492  RIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRF  551
            RIDRVLKNTEVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHISTLLLTLLFRF
Sbjct  481  RIDRVLKNTEVQAIITALGTGIHDEFDIAKLRYHKIVLMADADVDGQHISTLLLTLLFRF  540

Query  552  MRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYK  611
            MRPL+E+GH+FLAQPPLYKLKWQRS PEFAYSDRERDGL+EAGLKAGKKINK+DGIQRYK
Sbjct  541  MRPLVEHGHIFLAQPPLYKLKWQRSQPEFAYSDRERDGLMEAGLKAGKKINKDDGIQRYK  600

Query  612  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSF  662
            GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV+ARRSF
Sbjct  601  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARRSF  651


>gi|226362903|ref|YP_002780683.1| DNA gyrase subunit B [Rhodococcus opacus B4]
 gi|226241390|dbj|BAH51738.1| DNA gyrase subunit B [Rhodococcus opacus B4]
Length=680

 Score = 1160 bits (3001),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 557/680 (82%), Positives = 624/680 (92%), Gaps = 5/680 (0%)

Query  1    VAAQKK---KAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEA  57
            +AAQK     +  +YGA+SIT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEA
Sbjct  1    MAAQKSDKSTSSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA  60

Query  58   MAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAIS  117
            MAGYA+ V + LLEDGGV+V DDGRGIPV  HASG+PTV+VV+TQLHAGGKFDSD+YA+S
Sbjct  61   MAGYASKVEITLLEDGGVQVVDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDSYAVS  120

Query  118  GGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADP  177
            GGLHGVG+SVVNALSTRL+V+IKRDG+ W+Q Y  S+P  L +G  TK+TG+TVRFWADP
Sbjct  121  GGLHGVGISVVNALSTRLDVDIKRDGFRWNQTYTDSKPGELVKGEATKETGTTVRFWADP  180

Query  178  AVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERA  237
             +FETT Y FETVARRLQEMAFLNKGLTI LTDERV+  EV +EVVS VA+APK+A + +
Sbjct  181  NIFETTVYSFETVARRLQEMAFLNKGLTITLTDERVSDAEVTEEVVSQVADAPKTAEDES  240

Query  238  AESTAP--HKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNA  295
            AE+ AP  HKVK+R +HYPGGL D+V+HINRTK  IH+S+V F+ KGTGHE+EIAMQWN+
Sbjct  241  AEAGAPAVHKVKTRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHELEIAMQWNS  300

Query  296  GYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLA  355
            GYSESVHTFANTINTHEGGTHEEGFRSALT+ VNKYA D+KLLK+KDP LTGDDIREGLA
Sbjct  301  GYSESVHTFANTINTHEGGTHEEGFRSALTATVNKYALDKKLLKEKDPKLTGDDIREGLA  360

Query  356  AVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQ  415
            A+ISVKV EPQFEGQTKTKLGNTEV+SFVQK  NE L+HWFEANP DAK +VNKAVSSAQ
Sbjct  361  AIISVKVGEPQFEGQTKTKLGNTEVRSFVQKASNEHLSHWFEANPADAKTIVNKAVSSAQ  420

Query  416  ARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMF  475
            AR+AARKARELVRRKSATD+GGLPGKLADCRS DP KSE+Y+VEGDSAGGSAKSGRDSM+
Sbjct  421  ARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSGRDSMY  480

Query  476  QAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADV  535
            QAILPLRGKIINVEKARIDRVLKNTEVQ+IITA GTGIHDEFDI KLRYHKIVLMADADV
Sbjct  481  QAILPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADV  540

Query  536  DGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGL  595
            DGQHI+TLLLTLLFRFMRPL+E+GHV+LAQPPLYKLKWQR+DPEFAYSDRERD L++AGL
Sbjct  541  DGQHIATLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQRADPEFAYSDRERDALVKAGL  600

Query  596  KAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGED  655
            ++GKKINK+DGIQRYKGLGEM+AKELWETTMDP+VRVLR VTLDDAAAADELFS+LMGED
Sbjct  601  ESGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLRLVTLDDAAAADELFSVLMGED  660

Query  656  VDARRSFITRNAKDVRFLDV  675
            V+ARRSFITRNAKDVRFLDV
Sbjct  661  VEARRSFITRNAKDVRFLDV  680


>gi|54021970|ref|YP_116212.1| DNA gyrase subunit B [Nocardia farcinica IFM 10152]
 gi|54013478|dbj|BAD54848.1| putative DNA gyrase B subunit [Nocardia farcinica IFM 10152]
Length=696

 Score = 1149 bits (2972),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 557/664 (84%), Positives = 616/664 (93%), Gaps = 1/664 (0%)

Query  12   YGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLE  71
            YGA+SIT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAGYAT V+V LL 
Sbjct  34   YGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATRVDVTLLA  93

Query  72   DGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNAL  131
            DGGVEV DDGRGIPV  HA GIPTV+VVMTQLHAGGKFDS++YA+SGGLHGVG+SVVNAL
Sbjct  94   DGGVEVVDDGRGIPVEMHAQGIPTVEVVMTQLHAGGKFDSESYAVSGGLHGVGISVVNAL  153

Query  132  STRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVA  191
            S+R+EVEI  DGY WSQ Y+++ P  L +G PT +TG+TVRFWADP +FETT Y+FETVA
Sbjct  154  SSRVEVEIDVDGYHWSQTYKEATPSKLVKGEPTDRTGTTVRFWADPEIFETTTYNFETVA  213

Query  192  RRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTF  251
            RRLQEMAFLNKGLTI LTDERV++ +V DE+VS+ AEAPK   E   E+ + HKVK+RT+
Sbjct  214  RRLQEMAFLNKGLTITLTDERVSESDVTDEIVSETAEAPKHG-EPTGEAASEHKVKTRTY  272

Query  252  HYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTH  311
            HYPGGL DFV+HINRTK AIH+S+V F+GKGTGHE+E+AMQWN+GYSESVHTFANTINTH
Sbjct  273  HYPGGLEDFVRHINRTKQAIHNSVVSFTGKGTGHELEVAMQWNSGYSESVHTFANTINTH  332

Query  312  EGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQT  371
            EGGTHEEGFR+ALT+VVNKYAKD+KLLK+KD NLTGDDIREGLAA++SVKV+EPQFEGQT
Sbjct  333  EGGTHEEGFRAALTTVVNKYAKDKKLLKEKDGNLTGDDIREGLAAIVSVKVAEPQFEGQT  392

Query  372  KTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVRRKS  431
            KTKLGNTEVKSFVQ+ CNE LTHWFEANP DAK +V KAVSSAQAR+AARKARELVRRKS
Sbjct  393  KTKLGNTEVKSFVQRTCNEHLTHWFEANPADAKTIVQKAVSSAQARVAARKARELVRRKS  452

Query  432  ATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKA  491
            ATD+GGLPGKLADCRS DP KSE+Y+VEGDSAGGSAKSGRDSM+QAILPLRGKIINVEKA
Sbjct  453  ATDLGGLPGKLADCRSKDPSKSEIYIVEGDSAGGSAKSGRDSMYQAILPLRGKIINVEKA  512

Query  492  RIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRF  551
            RID+VLKN EVQ+IITA GTGIHDEFDI KLRYHKIVLMADADVDGQHISTLLLTLLFRF
Sbjct  513  RIDKVLKNNEVQSIITAFGTGIHDEFDISKLRYHKIVLMADADVDGQHISTLLLTLLFRF  572

Query  552  MRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYK  611
            MRPL+E+GHV+LAQPPLYKLKWQRS+PEFAYSDRERDGLLE GL AGKKINK+DGIQRYK
Sbjct  573  MRPLVEHGHVYLAQPPLYKLKWQRSEPEFAYSDRERDGLLERGLAAGKKINKDDGIQRYK  632

Query  612  GLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVR  671
            GLGEM+ KELWETTMDPSVRVLRQVTLDDAAAADELFS+LMGEDV+ARRSFITRNAKDVR
Sbjct  633  GLGEMNPKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVEARRSFITRNAKDVR  692

Query  672  FLDV  675
            FLDV
Sbjct  693  FLDV  696


>gi|111020663|ref|YP_703635.1| DNA gyrase subunit B [Rhodococcus jostii RHA1]
 gi|110820193|gb|ABG95477.1| DNA topoisomerase subunit B [Rhodococcus jostii RHA1]
Length=696

 Score = 1141 bits (2951),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 557/680 (82%), Positives = 622/680 (92%), Gaps = 5/680 (0%)

Query  1    VAAQKK---KAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEA  57
            VAAQK     +  +YGA+SIT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEA
Sbjct  17   VAAQKSDKSTSSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA  76

Query  58   MAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAIS  117
            MAG+AT V + LLEDGGV V DDGRGIPV  HASG+PTV+VV+TQLHAGGKFDSD+YA+S
Sbjct  77   MAGHATKVEITLLEDGGVRVVDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDSYAVS  136

Query  118  GGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADP  177
            GGLHGVG+SVVNALSTRL+V+IKRDG++W Q Y  S+P  L +G  TK+TG+TV FWADP
Sbjct  137  GGLHGVGISVVNALSTRLDVDIKRDGFQWHQTYTDSKPGELVKGEATKETGTTVTFWADP  196

Query  178  AVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERA  237
             +FETT Y FETVARRLQEMAFLNKGLTI LTDERV+  EV +EVVS VA+APK+A + +
Sbjct  197  NIFETTVYSFETVARRLQEMAFLNKGLTITLTDERVSDAEVTEEVVSQVADAPKTAEDES  256

Query  238  AESTAP--HKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNA  295
            AE+ AP  HKVK+R +HYPGGL D+V+HINRTK  IH+S+V F+ KGTGHE+EIAMQWN+
Sbjct  257  AEAEAPAVHKVKTRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHELEIAMQWNS  316

Query  296  GYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLA  355
            GYSESVHTFANTINTHEGGTHEEGFRSALT+ VNKYA D+KLLK+KDP LTGDDIREGLA
Sbjct  317  GYSESVHTFANTINTHEGGTHEEGFRSALTATVNKYALDKKLLKEKDPKLTGDDIREGLA  376

Query  356  AVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQ  415
            A+ISVKV EPQFEGQTKTKLGNTEV+SFVQK  NE L+HWFEANP DAK +VNKAVSSAQ
Sbjct  377  AIISVKVGEPQFEGQTKTKLGNTEVRSFVQKASNEHLSHWFEANPADAKTIVNKAVSSAQ  436

Query  416  ARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMF  475
            AR+AARKARELVRRKSATD+GGLPGKLADCRS DP KSE+Y+VEGDSAGGSAKSGRDSM+
Sbjct  437  ARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSGRDSMY  496

Query  476  QAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADV  535
            QAILPLRGKIINVEKARIDRVLKNTEVQ+IITA GTGIHDEFDI KLRYHKIVLMADADV
Sbjct  497  QAILPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADV  556

Query  536  DGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGL  595
            DGQHI+TLLLTLLFRFMRPL+E+GHV+LAQPPLYKLKWQRS+PEFAYSDRERD L++AGL
Sbjct  557  DGQHIATLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQRSEPEFAYSDRERDVLVKAGL  616

Query  596  KAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGED  655
            ++GKKINK+DGIQRYKGLGEM+AKELWETTMDP+VRVLR VTLDDAAAADELFS+LMGED
Sbjct  617  ESGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLRLVTLDDAAAADELFSVLMGED  676

Query  656  VDARRSFITRNAKDVRFLDV  675
            V+ARRSFITRNAKDVRFLDV
Sbjct  677  VEARRSFITRNAKDVRFLDV  696


>gi|333988645|ref|YP_004521259.1| DNA gyrase (subunit B) GyrB [Mycobacterium sp. JDM601]
 gi|333484613|gb|AEF34005.1| DNA gyrase (subunit B) GyrB [Mycobacterium sp. JDM601]
Length=671

 Score = 1128 bits (2918),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 583/669 (88%), Positives = 619/669 (93%), Gaps = 1/669 (0%)

Query  8    AQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNV  67
            AQ++YGA SI +LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYA+ V V
Sbjct  3    AQNKYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYASKVAV  62

Query  68   VLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSV  127
             +LEDGGVEV DDGRGIPVA HA+GIPTVDVVMT LHAGGKF+  AY++SGGLHGVGVSV
Sbjct  63   RILEDGGVEVTDDGRGIPVAMHATGIPTVDVVMTVLHAGGKFEEGAYSVSGGLHGVGVSV  122

Query  128  VNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDF  187
            VNALSTRLE +I  DG+EW Q Y+KS P  LK+G  T K+G+T+RFWADP VFETT YDF
Sbjct  123  VNALSTRLEADICVDGHEWFQTYDKSLPGTLKKGDKTTKSGTTIRFWADPDVFETTNYDF  182

Query  188  ETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVK  247
            ETVARRLQEMAFLNKGLTI LTDERV  +EVVDEVVSD AEAPKSA ++AAE+ APHKVK
Sbjct  183  ETVARRLQEMAFLNKGLTIELTDERVRTEEVVDEVVSDTAEAPKSAEDKAAEAEAPHKVK  242

Query  248  SRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANT  307
             R FHYPGGL DFV HINRTK AIH +++DF GKGTGHEVEIAMQWN GYSESVHTFANT
Sbjct  243  HRVFHYPGGLRDFVAHINRTKTAIHPTVIDFDGKGTGHEVEIAMQWNGGYSESVHTFANT  302

Query  308  INTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQF  367
            INT EGGTHEEGFRSALTSVVNKYAKD+KLLKDKDPNLTG+DIREGLAAVISVKVS+PQF
Sbjct  303  INTAEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGEDIREGLAAVISVKVSQPQF  362

Query  368  EGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELV  427
            EGQTKTKLGNTEVKSFVQKVCNEQL+HW E+NP +AKVV+NKAVSSAQAR AARKAR LV
Sbjct  363  EGQTKTKLGNTEVKSFVQKVCNEQLSHWLESNPAEAKVVINKAVSSAQAREAARKARALV  422

Query  428  RRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIIN  487
            RRKSATD+GGLPGKLADCRS DP KSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIIN
Sbjct  423  RRKSATDLGGLPGKLADCRSNDPTKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIIN  482

Query  488  VEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTL  547
            VEKARIDRVLKN EVQAIITALGTGIHDEFDI KLRYHKIVLMADADVDGQHISTLLLTL
Sbjct  483  VEKARIDRVLKNNEVQAIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHISTLLLTL  542

Query  548  LFRFMRPLIENGHVFLAQPPLYKLKWQR-SDPEFAYSDRERDGLLEAGLKAGKKINKEDG  606
            LFRFMRPLIENGHVFLAQPPLYKLKWQR ++PEFAYSDRERDGLLEAG  AGKKIN +DG
Sbjct  543  LFRFMRPLIENGHVFLAQPPLYKLKWQRGAEPEFAYSDRERDGLLEAGKAAGKKINVDDG  602

Query  607  IQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRN  666
            IQRYKGLGEMDAKELWETTMDP+VRVLRQVTLDDAAAADELFSILMGEDV+ARRSFITRN
Sbjct  603  IQRYKGLGEMDAKELWETTMDPAVRVLRQVTLDDAAAADELFSILMGEDVEARRSFITRN  662

Query  667  AKDVRFLDV  675
            AKDVRFLDV
Sbjct  663  AKDVRFLDV  671


>gi|325677512|ref|ZP_08157176.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Rhodococcus equi 
ATCC 33707]
 gi|111185878|dbj|BAF02676.1| DNA gyrase subunit B [Rhodococcus equi]
 gi|325551759|gb|EGD21457.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Rhodococcus equi 
ATCC 33707]
Length=678

 Score = 1105 bits (2859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/678 (83%), Positives = 616/678 (91%), Gaps = 3/678 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQK    + YGA+SIT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKSDKSNTYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YA+ V V +LEDGG++V DDGRGIPVA HASG PTV+VVMTQLHAGGKFDSDAYA+SGGL
Sbjct  61   YASKVEVTMLEDGGIQVVDDGRGIPVAMHASGAPTVEVVMTQLHAGGKFDSDAYAVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVG+SVVNALST++EV+I  DGY WSQ YE ++P  L QG PT +TG+TVRFWADP +F
Sbjct  121  HGVGISVVNALSTKVEVDINVDGYRWSQTYEHAKPGPLVQGEPTTETGTTVRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT Y+FETVARRLQEMAFLNKGLTI LTDERV +DEV D+VV   AEAPK+A+E   E+
Sbjct  181  ETTTYNFETVARRLQEMAFLNKGLTITLTDERVAEDEVTDDVVPVTAEAPKTATETEEEA  240

Query  241  TAPHK--VKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
             AP    VKSR +HYPGGL D+V+ INRTK AIH+S+V F+ KGTGHE+EIAMQWN+GYS
Sbjct  241  AAPKAPKVKSRVYHYPGGLEDYVRFINRTKQAIHNSVVGFTAKGTGHELEIAMQWNSGYS  300

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFR+ALTSVV KYAKD+KL+KDKDP LTGDDIREGLAA+I
Sbjct  301  ESVHTFANTINTHEGGTHEEGFRAALTSVVKKYAKDKKLVKDKDPELTGDDIREGLAAII  360

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKV+EPQFEGQTKTKLGNTEVKSFVQK CNE + HWFEANP DAK +V KAVSSAQAR 
Sbjct  361  SVKVAEPQFEGQTKTKLGNTEVKSFVQKACNENIAHWFEANPADAKTIVTKAVSSAQART  420

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATDIGGLPGKLADCRS DP K E+Y+VEGDSAGGSAKSGRDSM+QAI
Sbjct  421  AARKARELVRRKSATDIGGLPGKLADCRSNDPSKCEIYIVEGDSAGGSAKSGRDSMYQAI  480

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKN EVQ+IITA GTGIHDEFDI KLRYHKIVLMADADVDGQ
Sbjct  481  LPLRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDISKLRYHKIVLMADADVDGQ  540

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR-SDPEFAYSDRERDGLLEAGLKA  597
            HI+TLLLTLLFRFMRPL+E GHV+LAQPPLYKLKWQ+ + P+FAYSDRERDGLLEAGL A
Sbjct  541  HIATLLLTLLFRFMRPLVEQGHVYLAQPPLYKLKWQKGAAPDFAYSDRERDGLLEAGLAA  600

Query  598  GKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVD  657
            GKKINK+DGIQRYKGLGEM+AKELWETTMDPSVRVLRQVTLDDAAAADELFS+LMGEDV+
Sbjct  601  GKKINKDDGIQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVE  660

Query  658  ARRSFITRNAKDVRFLDV  675
            ARRSFITRNAKDVRFLDV
Sbjct  661  ARRSFITRNAKDVRFLDV  678


>gi|333917684|ref|YP_004491265.1| DNA gyrase subunit B [Amycolicicoccus subflavus DQS3-9A1]
 gi|333479905|gb|AEF38465.1| DNA gyrase subunit B [Amycolicicoccus subflavus DQS3-9A1]
Length=679

 Score = 1104 bits (2856),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 550/674 (82%), Positives = 610/674 (91%), Gaps = 0/674 (0%)

Query  2    AAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGY  61
            + ++  A   YGA+SIT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG+
Sbjct  6    SGKRSGADAGYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGH  65

Query  62   ATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLH  121
            A+ V+V LLEDGGVEV DDGRGIPV  H+ G PTV+VV+TQLHAGGKFDSD+YA+SGGLH
Sbjct  66   ASQVHVRLLEDGGVEVRDDGRGIPVGMHSMGRPTVEVVLTQLHAGGKFDSDSYAVSGGLH  125

Query  122  GVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFE  181
            GVG+SVVNALSTRLEVEI R+G  W+QVY  S P  L Q  P+ KTG+ VRFWADP +FE
Sbjct  126  GVGISVVNALSTRLEVEIDREGSLWNQVYTYSVPGELTQVEPSSKTGTVVRFWADPDIFE  185

Query  182  TTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAEST  241
            TTEY+FETV+RRLQEMAFLNKGLTI+LTDERV+  EV DEVVSD AE  K   E    + 
Sbjct  186  TTEYNFETVSRRLQEMAFLNKGLTISLTDERVSDSEVTDEVVSDTAEPIKHRDEAEKSTE  245

Query  242  APHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESV  301
            + HKVK R +HYPGGL DFVKHIN+TK AIH+S+V F+ KGTGHE+EIAMQWN GYSESV
Sbjct  246  SGHKVKKRLYHYPGGLEDFVKHINKTKQAIHTSVVGFTAKGTGHELEIAMQWNNGYSESV  305

Query  302  HTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVK  361
            HTFANTINTHEGGTHEEGFR+ALTSVVN+YAK++KLLK+KDPNL+GDD+REGLAAV+SVK
Sbjct  306  HTFANTINTHEGGTHEEGFRAALTSVVNRYAKEKKLLKEKDPNLSGDDVREGLAAVVSVK  365

Query  362  VSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAAR  421
            +SEPQFEGQTKTKLGNTEVKSFVQK CNE L HWFEANPT+AK+++NKAVSSAQAR+AAR
Sbjct  366  ISEPQFEGQTKTKLGNTEVKSFVQKACNENLGHWFEANPTEAKIIINKAVSSAQARMAAR  425

Query  422  KARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPL  481
            +ARELVRRKSATD+GGLPGKLADCRS+DP  SELY+VEGDSAGGSAKSGRDSMFQAILPL
Sbjct  426  RARELVRRKSATDLGGLPGKLADCRSSDPSISELYIVEGDSAGGSAKSGRDSMFQAILPL  485

Query  482  RGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHIS  541
            RGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFD+ KLRYHKI+LMADADVDGQHIS
Sbjct  486  RGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDVAKLRYHKIILMADADVDGQHIS  545

Query  542  TLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKI  601
            TLLLTLLFRFMRPLIE GHVFLA PPLYKLKW + +P+FAYSDRERDGLL+ GL+A +KI
Sbjct  546  TLLLTLLFRFMRPLIEQGHVFLAAPPLYKLKWSKGEPDFAYSDRERDGLLQRGLEANRKI  605

Query  602  NKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRS  661
            N  DG+QRYKGLGEM+AKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV ARRS
Sbjct  606  NTNDGVQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVSARRS  665

Query  662  FITRNAKDVRFLDV  675
            FITRNAKDVRFLDV
Sbjct  666  FITRNAKDVRFLDV  679


>gi|312137523|ref|YP_004004859.1| DNA gyrase subunit b [Rhodococcus equi 103S]
 gi|311886862|emb|CBH46170.1| DNA gyrase subunit B [Rhodococcus equi 103S]
Length=678

 Score = 1103 bits (2853),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 560/678 (83%), Positives = 616/678 (91%), Gaps = 3/678 (0%)

Query  1    VAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG  60
            +AAQK    + YGA+SIT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG
Sbjct  1    MAAQKSDKSNTYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG  60

Query  61   YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL  120
            YA+ V V +LEDGG++V DDGRGIPVA HASG PTV+VVMTQLHAGGKFDSDAYA+SGGL
Sbjct  61   YASKVEVTMLEDGGIQVVDDGRGIPVAMHASGAPTVEVVMTQLHAGGKFDSDAYAVSGGL  120

Query  121  HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF  180
            HGVG+SVVNALST++EV+I  DGY WSQ YE ++P  L QG PT +TG+TVRFWADP +F
Sbjct  121  HGVGISVVNALSTKVEVDINVDGYRWSQTYEHAKPGPLVQGEPTTETGTTVRFWADPEIF  180

Query  181  ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES  240
            ETT Y+FETVARRLQEMAFLNKGLTI LTDERV +DEV ++VV   AEAPK+A+E   E+
Sbjct  181  ETTTYNFETVARRLQEMAFLNKGLTITLTDERVAEDEVTEDVVPVTAEAPKTATETEEEA  240

Query  241  TAPHK--VKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYS  298
             AP    VKSR +HYPGGL D+V+ INRTK AIH+S+V F+ KGTGHE+EIAMQWN+GYS
Sbjct  241  AAPKAPKVKSRVYHYPGGLEDYVRFINRTKQAIHNSVVGFTAKGTGHELEIAMQWNSGYS  300

Query  299  ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVI  358
            ESVHTFANTINTHEGGTHEEGFR+ALTSVV KYAKD+KL+KDKDP LTGDDIREGLAA+I
Sbjct  301  ESVHTFANTINTHEGGTHEEGFRAALTSVVKKYAKDKKLVKDKDPELTGDDIREGLAAII  360

Query  359  SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARI  418
            SVKV+EPQFEGQTKTKLGNTEVKSFVQK CNE + HWFEANP DAK +V KAVSSAQAR 
Sbjct  361  SVKVAEPQFEGQTKTKLGNTEVKSFVQKACNENIAHWFEANPADAKTIVTKAVSSAQART  420

Query  419  AARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI  478
            AARKARELVRRKSATDIGGLPGKLADCRS DP K E+Y+VEGDSAGGSAKSGRDSM+QAI
Sbjct  421  AARKARELVRRKSATDIGGLPGKLADCRSNDPSKCEIYIVEGDSAGGSAKSGRDSMYQAI  480

Query  479  LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQ  538
            LPLRGKIINVEKARIDRVLKN EVQ+IITA GTGIHDEFDI KLRYHKIVLMADADVDGQ
Sbjct  481  LPLRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDICKLRYHKIVLMADADVDGQ  540

Query  539  HISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR-SDPEFAYSDRERDGLLEAGLKA  597
            HI+TLLLTLLFRFMRPL+E GHV+LAQPPLYKLKWQ+ + P+FAYSDRERDGLLEAGL A
Sbjct  541  HIATLLLTLLFRFMRPLVEQGHVYLAQPPLYKLKWQKGAAPDFAYSDRERDGLLEAGLAA  600

Query  598  GKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVD  657
            GKKINK+DGIQRYKGLGEM+AKELWETTMDPSVRVLRQVTLDDAAAADELFS+LMGEDV+
Sbjct  601  GKKINKDDGIQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVE  660

Query  658  ARRSFITRNAKDVRFLDV  675
            ARRSFITRNAKDVRFLDV
Sbjct  661  ARRSFITRNAKDVRFLDV  678


>gi|262200051|ref|YP_003271259.1| DNA gyrase subunit B [Gordonia bronchialis DSM 43247]
 gi|262083398|gb|ACY19366.1| DNA gyrase, B subunit [Gordonia bronchialis DSM 43247]
Length=685

 Score = 1087 bits (2812),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 531/671 (80%), Positives = 588/671 (88%), Gaps = 10/671 (1%)

Query  11   EYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLL  70
            EY A SI+ILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAGYA+ V V LL
Sbjct  19   EYSADSISILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYASKVEVTLL  78

Query  71   EDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNA  130
            EDGGVEV DDGRGIP   HA+G PTV+VVMTQLHAGGKFDSDAYA+SGGLHGVG+SVVNA
Sbjct  79   EDGGVEVVDDGRGIPTDMHATGSPTVEVVMTQLHAGGKFDSDAYAVSGGLHGVGISVVNA  138

Query  131  LSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETV  190
            LST++E+EI   G+ W Q Y+ ++P  L++G  T+KTG+ VRFW DP +FETT +  ETV
Sbjct  139  LSTKVELEINYGGFHWEQTYDHAKPQPLEKGDATRKTGTLVRFWPDPEIFETTVFSAETV  198

Query  191  ARRLQEMAFLNKGLTINLTDERVTQDEVV------DEVVSDVAEAPKSASERAAESTAPH  244
            ARRLQEMAFLNKGLTI LTD+R    E        DE V+D AE  K+  E+ A++    
Sbjct  199  ARRLQEMAFLNKGLTITLTDKRPRAVEAPPGDANGDESVADAAETVKTEEEKKADA----  254

Query  245  KVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTF  304
            K K+RT+HYP GLVD++KH+NRTK  IH+S++ F+ KGTGHEVEIAMQWNAGYSESVHTF
Sbjct  255  KPKTRTYHYPDGLVDYIKHLNRTKQPIHNSVIGFTAKGTGHEVEIAMQWNAGYSESVHTF  314

Query  305  ANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSE  364
            ANTINTHEGGTHEEGFR+ALTS VNKYA D+KLLK+KD  LTGDDIREGLAAVISVKV +
Sbjct  315  ANTINTHEGGTHEEGFRAALTSTVNKYALDKKLLKEKDGKLTGDDIREGLAAVISVKVGD  374

Query  365  PQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKAR  424
            PQFEGQTKTKLGNTEVK FVQK CNE L HWFE+NP +AK+++ KAV S+QAR+AARKAR
Sbjct  375  PQFEGQTKTKLGNTEVKGFVQKTCNEHLAHWFESNPAEAKIIIKKAVDSSQARLAARKAR  434

Query  425  ELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGK  484
            ELVRRK+ATDIGGLPGKLADCRS DP K E+Y+VEGDSAGGSAKSGRDSM+QAILPLRGK
Sbjct  435  ELVRRKTATDIGGLPGKLADCRSNDPSKCEVYIVEGDSAGGSAKSGRDSMYQAILPLRGK  494

Query  485  IINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLL  544
            IINVEKARIDRVLKN EVQ+IITA GTGIHDEFDI KLRYHKIVLMADADVDGQHISTLL
Sbjct  495  IINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADVDGQHISTLL  554

Query  545  LTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKE  604
            LTLLFRFMRPLIE+GHV+LAQPPLYKLKWQ+ +PEFAYSDRERDGLLEAG  AG KIN +
Sbjct  555  LTLLFRFMRPLIEHGHVYLAQPPLYKLKWQKREPEFAYSDRERDGLLEAGRTAGWKINTD  614

Query  605  DGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFIT  664
            DGIQRYKGLGEM+AKELWETTMDP VRVLRQVTLDDAAAADELFSILMGEDV ARRSFI 
Sbjct  615  DGIQRYKGLGEMNAKELWETTMDPEVRVLRQVTLDDAAAADELFSILMGEDVAARRSFIA  674

Query  665  RNAKDVRFLDV  675
            RNAKDVRFLDV
Sbjct  675  RNAKDVRFLDV  685


>gi|226303498|ref|YP_002763456.1| DNA gyrase subunit B [Rhodococcus erythropolis PR4]
 gi|229491178|ref|ZP_04385006.1| DNA gyrase, B subunit [Rhodococcus erythropolis SK121]
 gi|226182613|dbj|BAH30717.1| DNA gyrase subunit B [Rhodococcus erythropolis PR4]
 gi|229321916|gb|EEN87709.1| DNA gyrase, B subunit [Rhodococcus erythropolis SK121]
Length=678

 Score = 1084 bits (2803),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 546/681 (81%), Positives = 614/681 (91%), Gaps = 9/681 (1%)

Query  1    VAAQKK---KAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEA  57
            +AAQK     +  +Y A+SIT+LEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEA
Sbjct  1    MAAQKSDTSTSSKDYNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA  60

Query  58   MAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAIS  117
            MAG+AT V V LLEDGG+ V DDGRGIPV  HASG+PTV+VV+TQLHAGGKFDSD+YA+S
Sbjct  61   MAGHATKVEVTLLEDGGIRVIDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDSYAVS  120

Query  118  GGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADP  177
            GGLHGVG+SVVNALSTRL+V+IK DGY W Q Y  S+P  L QG PTK+TG+TV FWADP
Sbjct  121  GGLHGVGISVVNALSTRLDVDIKVDGYRWQQTYTDSKPGELVQGDPTKETGTTVSFWADP  180

Query  178  AVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERA  237
             +FETT Y+FETVARRLQEMAFLNKGLTI LTDER    EV+D+  ++VAEAPKSA+E A
Sbjct  181  EIFETTRYNFETVARRLQEMAFLNKGLTITLTDERA---EVIDDEAAEVAEAPKSAAEEA  237

Query  238  AESTA--PHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNA  295
             E+    P K K+R +HYPGGL D+V+HIN++K  IH+S+V F+ KGTGHE+E+AMQWN+
Sbjct  238  EEAAQAAPRKSKTRIYHYPGGLEDYVRHINKSKTPIHNSVVGFTAKGTGHELEVAMQWNS  297

Query  296  GYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLA  355
            GYSESVHTFANTINTHEGGTHEEGFR+ALT+ VNKYA ++KLLKDKDP LTGDDIREGLA
Sbjct  298  GYSESVHTFANTINTHEGGTHEEGFRAALTATVNKYALEKKLLKDKDPKLTGDDIREGLA  357

Query  356  AVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQ  415
            A+ISVKV EPQFEGQTKTKLGNTEVKSFVQK CNE L HWFEANP DAK +VNKAVSSAQ
Sbjct  358  AIISVKVGEPQFEGQTKTKLGNTEVKSFVQKACNEHLAHWFEANPADAKTIVNKAVSSAQ  417

Query  416  ARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMF  475
            AR+AARKARELVRRKSATD+GGLPGKLADCRS DP KSE+Y+VEGDSAGGSAKSGRDSM+
Sbjct  418  ARVAARKARELVRRKSATDLGGLPGKLADCRSNDPEKSEIYIVEGDSAGGSAKSGRDSMY  477

Query  476  QAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADV  535
            QAILPLRGKIINVEKARIDRVLKNTEVQ+IITA GTGIHDEFDI KLRYHKIVLMADADV
Sbjct  478  QAILPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADV  537

Query  536  DGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR-SDPEFAYSDRERDGLLEAG  594
            DGQHI+TLLLTLLFRFMRPL+E+G V+LAQPPLYKLKWQ+ + PEFAYSDRERD +++AG
Sbjct  538  DGQHIATLLLTLLFRFMRPLVEHGKVYLAQPPLYKLKWQKGAQPEFAYSDRERDAMVKAG  597

Query  595  LKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGE  654
            L++GKKINK+DGIQRYKGLGEM+AKELWETTMDP+VRVLR VTLDDAAAADELFS+LMGE
Sbjct  598  LESGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLRLVTLDDAAAADELFSVLMGE  657

Query  655  DVDARRSFITRNAKDVRFLDV  675
            DV+ARRSFITRNA+DVRFLDV
Sbjct  658  DVEARRSFITRNARDVRFLDV  678


>gi|296392546|ref|YP_003657430.1| DNA gyrase subunit B [Segniliparus rotundus DSM 44985]
 gi|296179693|gb|ADG96599.1| DNA gyrase, B subunit [Segniliparus rotundus DSM 44985]
Length=673

 Score = 1076 bits (2783),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 524/675 (78%), Positives = 595/675 (89%), Gaps = 5/675 (0%)

Query  3    AQKKKA-QDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGY  61
            ++KK A +  YGA+SITILEGLEAVRKRPGMYIGSTGERGLHHL+ EVVDN+VDEAMAGY
Sbjct  2    SEKKNADKSSYGASSITILEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGY  61

Query  62   ATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLH  121
            AT V+V LL DGGVEV DDGRGIPVA HASG PTV+VV+T LHAGGKFDSD+YA+SGGLH
Sbjct  62   ATRVDVTLLADGGVEVVDDGRGIPVAPHASGPPTVEVVLTVLHAGGKFDSDSYAVSGGLH  121

Query  122  GVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFE  181
            GVG+SVVNALS +LEVEI  DG+ WSQ Y+K++P  L +G P K+TG+TVRFWADP +FE
Sbjct  122  GVGISVVNALSYKLEVEIDVDGFHWSQSYDKAKPGPLTKGDPVKRTGTTVRFWADPEIFE  181

Query  182  TTEYDFETVARRLQEMAFLNKGLTINLTDERVTQ-DEVVDEVVSDVAEAPKSASERAAES  240
            TT YDF+T+ARRLQEMAFLNKGL I LTD R  Q D   D    D AE  +S  E+ A++
Sbjct  182  TTHYDFDTIARRLQEMAFLNKGLIITLTDLREGQIDAAEDGEALDTAEVARS--EQEAQA  239

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
             AP  VK R +HYPGGL D+V HINRTK A+H+SIV F GKG GHEVEIAMQWN+GY+ES
Sbjct  240  QAP-AVKRREYHYPGGLHDYVGHINRTKTAVHNSIVSFEGKGEGHEVEIAMQWNSGYTES  298

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            V+TFANTINTHEGGTHEEGFR+ALTS +NKYA+D+K+LK+KD NLTGDD+REGLAAVISV
Sbjct  299  VYTFANTINTHEGGTHEEGFRAALTSTMNKYARDKKILKEKDKNLTGDDVREGLAAVISV  358

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            K+ EPQFEGQTKTKLGNTE++SFVQK+CNE+LTHWFEANP++AK++V KA  +  AR AA
Sbjct  359  KLGEPQFEGQTKTKLGNTEIRSFVQKICNEELTHWFEANPSEAKLIVTKAQQAYLAREAA  418

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            R ARE VRRK+ATDIGGLPGKLADCRS DP KSE+Y+VEGDSAGGSAKSGR+S FQAILP
Sbjct  419  RSARETVRRKTATDIGGLPGKLADCRSKDPSKSEVYIVEGDSAGGSAKSGRNSEFQAILP  478

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            +RGKIINVEKARIDRVLKNTEVQ+IITA GTGIHDEFD+ KLRYHKIVLMADADVDGQHI
Sbjct  479  IRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDLAKLRYHKIVLMADADVDGQHI  538

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPL+E+GHV+LA PPLYKLKWQR++PE+AYSDRERD L+EAGL AGK+
Sbjct  539  STLLLTLLFRFMRPLVEHGHVYLAAPPLYKLKWQRAEPEYAYSDRERDALIEAGLSAGKR  598

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INK+DG+QRYKGLGEM+AKELWETTMDP  R LR VT+DDAAAADELFSILMGEDV ARR
Sbjct  599  INKDDGVQRYKGLGEMNAKELWETTMDPDTRTLRLVTMDDAAAADELFSILMGEDVPARR  658

Query  661  SFITRNAKDVRFLDV  675
             FI RNA+DVRFLDV
Sbjct  659  GFIARNARDVRFLDV  673


>gi|319949427|ref|ZP_08023488.1| DNA gyrase subunit B [Dietzia cinnamea P4]
 gi|319436889|gb|EFV91948.1| DNA gyrase subunit B [Dietzia cinnamea P4]
Length=705

 Score = 1073 bits (2775),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 517/691 (75%), Positives = 589/691 (86%), Gaps = 26/691 (3%)

Query  11   EYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLL  70
            EYGA+SIT+LEGLEAVR RPGMYIGSTG RGLHHLIWEVVDN+VDEAMAG+AT V V LL
Sbjct  15   EYGASSITVLEGLEAVRMRPGMYIGSTGPRGLHHLIWEVVDNSVDEAMAGHATGVKVTLL  74

Query  71   EDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNA  130
            EDGGVEV DDGRGIPV  H SG+PTV VVMTQLHAGGKFDSD+YA+SGGLHGVG+SVVNA
Sbjct  75   EDGGVEVIDDGRGIPVEMHESGMPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVGISVVNA  134

Query  131  LSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETV  190
            LSTR+EV+IKRDG  W Q ++ + P  L    P + TG+ VRFWADP++FETTEYDF+ V
Sbjct  135  LSTRVEVQIKRDGRLWKQDFDMAVPAELVDAGPAEGTGTKVRFWADPSIFETTEYDFDIV  194

Query  191  ARRLQEMAFLNKGLTINLTDERVTQDEV--VDEVVSDVAEAPKSA---------------  233
            ARRLQEMAFLNKGLTI LTD R   ++   +D +       P SA               
Sbjct  195  ARRLQEMAFLNKGLTITLTDRRPRAEKAAELDAIADSEGVGPDSAPGSDEGSDLASAVDA  254

Query  234  -------SERAAESTAPHKVKSR--TFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTG  284
                   +   AE+  P K++ R  TFHYP GL D+VK IN++K AIH +I+ F GKGTG
Sbjct  255  EQVFVEGAGDGAEAAEPEKIRERKRTFHYPDGLKDYVKAINKSKTAIHPTILYFEGKGTG  314

Query  285  HEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPN  344
            HEVE+AMQWN+GYSESVHTFANTINTHEGGTHEEGFR+ALTS+VNKYA+D+KL+K+KDPN
Sbjct  315  HEVEVAMQWNSGYSESVHTFANTINTHEGGTHEEGFRAALTSLVNKYARDKKLIKEKDPN  374

Query  345  LTGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAK  404
            LTGDDIREGLAAVIS K+++PQFEGQTKTKLGNTEVK FVQ+   E + HWFEANP +AK
Sbjct  375  LTGDDIREGLAAVISAKIADPQFEGQTKTKLGNTEVKGFVQRQVAEHVGHWFEANPAEAK  434

Query  405  VVVNKAVSSAQARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAG  464
            V+VNKA++S+QAR+AARKARE+VRRKSATDIGGLPGKLADCRS DP KSELY+VEGDSAG
Sbjct  435  VIVNKAIASSQARVAARKAREMVRRKSATDIGGLPGKLADCRSKDPSKSELYIVEGDSAG  494

Query  465  GSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRY  524
            GSAKSGRDSMFQAILPLRGKIINVEK+RID+VLKN EVQAIITALGTGIH+EFDI KLRY
Sbjct  495  GSAKSGRDSMFQAILPLRGKIINVEKSRIDKVLKNAEVQAIITALGTGIHEEFDIDKLRY  554

Query  525  HKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSD  584
            HKIVLMADADVDGQHI+TLLLTL+FRFM+PL+ENG+V+LAQPPLYKLKW + +P+FAYSD
Sbjct  555  HKIVLMADADVDGQHIATLLLTLIFRFMKPLVENGYVYLAQPPLYKLKWSKGEPDFAYSD  614

Query  585  RERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAA  644
            RERD LL+ GL+  +KIN +DGIQRYKGLGEM+ KELWETTMDPSVR LRQVTL+DAAAA
Sbjct  615  RERDELLKIGLENKRKINVDDGIQRYKGLGEMNPKELWETTMDPSVRTLRQVTLEDAAAA  674

Query  645  DELFSILMGEDVDARRSFITRNAKDVRFLDV  675
            DELFSILMGEDVDARR+FITRNA+DVRFLDV
Sbjct  675  DELFSILMGEDVDARRNFITRNARDVRFLDV  705


>gi|343928739|ref|ZP_08768184.1| DNA gyrase subunit B [Gordonia alkanivorans NBRC 16433]
 gi|343761488|dbj|GAA15110.1| DNA gyrase subunit B [Gordonia alkanivorans NBRC 16433]
Length=687

 Score = 1066 bits (2756),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 529/673 (79%), Positives = 593/673 (89%), Gaps = 11/673 (1%)

Query  11   EYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLL  70
            EYGA SI ILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAG+A+ V+V LL
Sbjct  18   EYGADSINILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGFASRVDVTLL  77

Query  71   EDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNA  130
            EDGGV+V DDGRGIPV  H +G+PTV+VVMTQLHAGGKFDSD+YA+SGGLHGVG+SVVNA
Sbjct  78   EDGGVQVVDDGRGIPVEKHRTGVPTVEVVMTQLHAGGKFDSDSYAVSGGLHGVGISVVNA  137

Query  131  LSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF-ETTEYDFET  189
            LST++E+EI RDG+ W+Q Y  ++P  L+QG  T+KTG+TVRFW DP +F ETT ++ ET
Sbjct  138  LSTKVELEIARDGHNWTQAYSYAKPGALEQGDATRKTGTTVRFWPDPDIFTETTRFNAET  197

Query  190  VARRLQEMAFLNKGLTINLTDERVTQDEVV-------DEVVSDVAEAPKSASERAAESTA  242
            VARRLQEMAFLNKGLTI LTD+R    E         D   +DVAE   S +E+A  +  
Sbjct  198  VARRLQEMAFLNKGLTITLTDQRPQAVEPPGDPNGDEDAPTTDVAEVVLSETEKAQAAAK  257

Query  243  PHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVH  302
            P   K+RT+HYP GLVD++KH+NRTK +IH++++ FS KG GHEVEIAMQWNAGYSESVH
Sbjct  258  P---KTRTYHYPDGLVDYIKHLNRTKQSIHNTVIGFSAKGEGHEVEIAMQWNAGYSESVH  314

Query  303  TFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKV  362
            TFANTINTHEGGTHEEGFR+ALTS VNKYA ++KL+K+KD  LTGDDIREGLAAVIS KV
Sbjct  315  TFANTINTHEGGTHEEGFRAALTSTVNKYALEKKLIKEKDGKLTGDDIREGLAAVISAKV  374

Query  363  SEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARK  422
            S+PQFEGQTKTKLGNTE+K FVQ+ CNE L HWFEANP +AK+++ KA  SAQAR+AAR+
Sbjct  375  SDPQFEGQTKTKLGNTEIKGFVQRTCNEHLGHWFEANPAEAKIIIKKAADSAQARMAARR  434

Query  423  ARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLR  482
            ARE+VRRK+ATDIGGLPGKLADCRS DP K E+Y+VEGDSAGGSAKSGRDSM+QAILPLR
Sbjct  435  AREMVRRKTATDIGGLPGKLADCRSNDPTKCEVYIVEGDSAGGSAKSGRDSMYQAILPLR  494

Query  483  GKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHIST  542
            GKIINVEKARIDRVLKN EVQ+IITA GTGIHDEFDI KLRYHKIVLMADADVDGQHIST
Sbjct  495  GKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADVDGQHIST  554

Query  543  LLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKIN  602
            LLLTLLFRFMRPLIE+GHVFLAQPPLYKLKWQ+S PEFAYSDRERDGLLEAG  AGKKIN
Sbjct  555  LLLTLLFRFMRPLIEHGHVFLAQPPLYKLKWQKSAPEFAYSDRERDGLLEAGRAAGKKIN  614

Query  603  KEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSF  662
             +DGIQRYKGLGEM+AKELWETTMDP+VRVLRQVTLDDAAAADELFSILMGEDV ARRSF
Sbjct  615  TDDGIQRYKGLGEMNAKELWETTMDPAVRVLRQVTLDDAAAADELFSILMGEDVAARRSF  674

Query  663  ITRNAKDVRFLDV  675
            I RNAKDVRFLDV
Sbjct  675  IARNAKDVRFLDV  687


>gi|317509459|ref|ZP_07967077.1| DNA gyrase, subunit B [Segniliparus rugosus ATCC BAA-974]
 gi|316252288|gb|EFV11740.1| DNA gyrase, subunit B [Segniliparus rugosus ATCC BAA-974]
Length=678

 Score = 1054 bits (2725),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 523/675 (78%), Positives = 594/675 (88%), Gaps = 5/675 (0%)

Query  3    AQKKKAQDE-YGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGY  61
            ++KK A+   YGA+SITILEGLEAVRKRPGMYIGSTGERGLHHL+ EVVDN+VDEAMAGY
Sbjct  7    SEKKNAEKSTYGASSITILEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGY  66

Query  62   ATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLH  121
            AT V+V LL DGG+EV DDGRGIPVA HASG PTV+VV+T LHAGGKFDSD+YA+SGGLH
Sbjct  67   ATRVDVTLLADGGIEVVDDGRGIPVAPHASGPPTVEVVLTVLHAGGKFDSDSYAVSGGLH  126

Query  122  GVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFE  181
            GVG+SVVNALS +LEVEI  DG+ W+Q Y+ ++P  L +GA  K+TG+TVRFWADP +FE
Sbjct  127  GVGISVVNALSYKLEVEIDVDGHHWTQAYDNAKPGPLVKGAAVKRTGTTVRFWADPKIFE  186

Query  182  TTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVS-DVAEAPKSASERAAES  240
            TT YDF+T+ARRLQEMAFLNKGL I LTD R  Q +  DE    D AE  +S  +  A++
Sbjct  187  TTRYDFDTIARRLQEMAFLNKGLIITLTDLREGQIDASDEGEGVDTAELVRSEGDDEAKA  246

Query  241  TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES  300
             A   VK R +HYPGGL D+V HINRTK AIH+SIV F GKG GHEVEIAMQWN+GY+ES
Sbjct  247  PA---VKRREYHYPGGLHDYVAHINRTKTAIHTSIVSFEGKGEGHEVEIAMQWNSGYTES  303

Query  301  VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV  360
            V+TFANTINTHEGGTHEEGFR+ALTS VNKYA+D+K+LK+KD NL+GDD+REGL+AVISV
Sbjct  304  VYTFANTINTHEGGTHEEGFRAALTSTVNKYARDKKILKEKDKNLSGDDVREGLSAVISV  363

Query  361  KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA  420
            K+SEPQFEGQTKTKLGNTE++SFVQK+CNE+L HWFEANP++AKV+V+KA  +AQAR AA
Sbjct  364  KLSEPQFEGQTKTKLGNTEIRSFVQKICNEELAHWFEANPSEAKVIVSKAQQAAQARDAA  423

Query  421  RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP  480
            + AR LVRRKSATDIGGLPGKLADCRS DP KSE+Y+VEGDSAGGSAKSGR+S FQAILP
Sbjct  424  QNARALVRRKSATDIGGLPGKLADCRSKDPSKSEVYIVEGDSAGGSAKSGRNSEFQAILP  483

Query  481  LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI  540
            +RGKIINVEKARIDRVLKNTEVQ+IITA GTGIHDEFD+ KLRYHKIVLMADADVDGQHI
Sbjct  484  IRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDLAKLRYHKIVLMADADVDGQHI  543

Query  541  STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK  600
            STLLLTLLFRFMRPL+E+GHV+LA PPLYKLKWQR++PE+AYSDRERD LL  GL +GKK
Sbjct  544  STLLLTLLFRFMRPLVEHGHVYLAAPPLYKLKWQRAEPEYAYSDRERDSLLSIGLGSGKK  603

Query  601  INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR  660
            INK+DGIQRYKGLGEM+AKELWETTMDP  R LR VT+DDAAAADELFSILMGEDV ARR
Sbjct  604  INKDDGIQRYKGLGEMNAKELWETTMDPDTRTLRLVTMDDAAAADELFSILMGEDVPARR  663

Query  661  SFITRNAKDVRFLDV  675
             FI RNAKDVRFLDV
Sbjct  664  GFIARNAKDVRFLDV  678


>gi|326383914|ref|ZP_08205598.1| DNA gyrase subunit B [Gordonia neofelifaecis NRRL B-59395]
 gi|326197373|gb|EGD54563.1| DNA gyrase subunit B [Gordonia neofelifaecis NRRL B-59395]
Length=684

 Score = 1031 bits (2666),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 511/673 (76%), Positives = 578/673 (86%), Gaps = 5/673 (0%)

Query  6    KKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTV  65
            K    EYGA SI+ILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN+VDEAMAGYAT V
Sbjct  14   KSKPSEYGADSISILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATRV  73

Query  66   NVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGV  125
            +V LL DGG+ V DDGRG+PV  HA+G+P V+V+MTQLHAGGKFDSD+YA+SGGLHGVG+
Sbjct  74   DVTLLADGGIRVVDDGRGMPVGMHATGVPAVEVIMTQLHAGGKFDSDSYAVSGGLHGVGI  133

Query  126  SVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEY  185
            SVVNALST++++EIKR+G  W Q Y  +EP  L +G     TG++V FWADP +FETTEY
Sbjct  134  SVVNALSTKVDLEIKRNGSVWRQTYNNAEPTPLLEGEAASGTGTSVSFWADPKIFETTEY  193

Query  186  DFETVARRLQEMAFLNKGLTINLTDERV-TQDEVVDEVVSDVAEAPKSASERAAESTAPH  244
            + ET+ARRLQEMAFLNKGLTI LTDERV       +   S+  +A     E+ A  TA  
Sbjct  194  NIETIARRLQEMAFLNKGLTITLTDERVHEAVLEAEVEESEDGDASIKTEEQKA--TAIA  251

Query  245  KVKSRTFHYPGGLVDFVKHIN-RTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHT  303
            KVK+RT+HYP GL+D++KH+N R+K  IH ++V F+ KG GHEVEIAMQWN GY+ESVHT
Sbjct  252  KVKTRTYHYPDGLIDYIKHLNSRSKAPIHKTVVGFTAKGEGHEVEIAMQWNEGYAESVHT  311

Query  304  FANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVS  363
            FANTINT EGGTHEEGFR+ALTS VN+YA D+KL+K+KD  L+GDDIREGLAAVISVKV+
Sbjct  312  FANTINTAEGGTHEEGFRAALTSTVNRYAVDKKLIKEKDGKLSGDDIREGLAAVISVKVA  371

Query  364  EPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKA  423
            +PQFEGQTKTKLGNTEVKSFVQK CNE L  WF+ANP +AK ++ KA  S QAR+AAR+A
Sbjct  372  DPQFEGQTKTKLGNTEVKSFVQKTCNEHLAMWFDANPAEAKTIIKKAADSQQARLAARRA  431

Query  424  RELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRG  483
            RELVRRK+ATDIGGLPGKLADCRS DP K E+Y+VEGDSAGGSAKSGRDSM+QAILPLRG
Sbjct  432  RELVRRKTATDIGGLPGKLADCRSNDPSKCEVYIVEGDSAGGSAKSGRDSMYQAILPLRG  491

Query  484  KIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTL  543
            KIINVEKARIDRVLKN EVQ+IITA GTGIHDEFDI KLRYHKIVLMADADVDGQHI+TL
Sbjct  492  KIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADVDGQHIATL  551

Query  544  LLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR-SDPEFAYSDRERDGLLEAGLKAGKKIN  602
            LLTLLFRFMRPLIE GHV+LA PPLYKLKWQ+  +PEFAY+DRERD LLEAG  AGKKIN
Sbjct  552  LLTLLFRFMRPLIEQGHVYLAMPPLYKLKWQKGQEPEFAYNDRERDALLEAGKAAGKKIN  611

Query  603  KEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSF  662
             +DGIQRYKGLGEM+A ELWETTMDP VRVL+QVTLDDAAAADELFSILMGEDV ARR+F
Sbjct  612  TDDGIQRYKGLGEMNASELWETTMDPDVRVLKQVTLDDAAAADELFSILMGEDVVARRTF  671

Query  663  ITRNAKDVRFLDV  675
            I RNAKDVRFLDV
Sbjct  672  IARNAKDVRFLDV  684


>gi|296137759|ref|YP_003645002.1| DNA gyrase subunit beta [Tsukamurella paurometabola DSM 20162]
 gi|296025893|gb|ADG76663.1| DNA gyrase, B subunit [Tsukamurella paurometabola DSM 20162]
Length=688

 Score = 1029 bits (2661),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 527/683 (78%), Positives = 585/683 (86%), Gaps = 16/683 (2%)

Query  6    KKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTV  65
            K     YGA SI  LEGLEAVRKRPGMYIG+TG RGLHH+IWEVVDN+VDEAMAG+AT V
Sbjct  9    KSGSGNYGADSIKQLEGLEAVRKRPGMYIGTTGPRGLHHMIWEVVDNSVDEAMAGHATRV  68

Query  66   NVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGV  125
            +V L  DGGVEV DDGRGIPVA HA GIPTV +V+T LHAGGKFDSDAYA+SGGLHGVG+
Sbjct  69   DVKLRADGGVEVIDDGRGIPVAMHAKGIPTVQLVLTSLHAGGKFDSDAYAVSGGLHGVGI  128

Query  126  SVVNALSTRLEVEIKRDGYEWSQVYE------KSEPLGLKQGAPTKKTGSTVRFWADPAV  179
            SVVNALS+R+EVEI  DG+ W Q +        S    L +G PT +TG+TVRFWADP V
Sbjct  129  SVVNALSSRVEVEIDVDGFHWQQNFHWDDAKRDSVAEDLIKGEPTTRTGTTVRFWADPKV  188

Query  180  F-ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAA  238
            F ETT YDFETV+RRLQEMAFLNKGLTI LTDER    EV DE +++  EAP +  E  A
Sbjct  189  FTETTHYDFETVSRRLQEMAFLNKGLTITLTDERPVAIEVPDEDITE--EAPSAHEEDVA  246

Query  239  ES---TAPHKVKSRTFHYPGGLVDFVKHIN--RTKNAIHSSIVDFSGKGTGHEVEIAMQW  293
             +    AP K + R FHYP GLVD+VKHIN   +K+ IH+SI+ F GK  GHE+EIAMQW
Sbjct  247  AALAEVAPKK-RERIFHYPDGLVDYVKHINARTSKSPIHASIISFEGKEKGHEIEIAMQW  305

Query  294  NAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREG  353
            N+GYSESVHTFANTINTHEGGTHEEGFR+ALT VV  YAKD+KL+K+KD  L+GDDIREG
Sbjct  306  NSGYSESVHTFANTINTHEGGTHEEGFRTALTGVVKAYAKDKKLVKEKDGELSGDDIREG  365

Query  354  LAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSS  413
            LAAVISVKV+EPQFEGQTKTKLGNTEVKSFVQKVC EQL  WF++NP DAK +V KA +S
Sbjct  366  LAAVISVKVAEPQFEGQTKTKLGNTEVKSFVQKVCREQLQFWFDSNPADAKTIVQKAAAS  425

Query  414  AQARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDS  473
            AQAR+AARKARELVRRKSATDIGGLPGKLADCRS DP K E+Y+VEGDSAGGSAKSGRDS
Sbjct  426  AQARLAARKARELVRRKSATDIGGLPGKLADCRSNDPDKCEVYIVEGDSAGGSAKSGRDS  485

Query  474  MFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADA  533
            M+QAILP+RGKIINVEKARID+VLKNTEVQ+IITA GTGIHDEFDI KLRY KIVLMADA
Sbjct  486  MYQAILPIRGKIINVEKARIDKVLKNTEVQSIITAFGTGIHDEFDIAKLRYKKIVLMADA  545

Query  534  DVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQR-SDPEFAYSDRERDGLLE  592
            DVDGQHISTLLLTLLFRFMRPL+E+GHV+LAQPPLYKLKWQ+ ++PEFAYSD ERD LL 
Sbjct  546  DVDGQHISTLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQKGAEPEFAYSDAERDALLA  605

Query  593  AGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILM  652
             GLK+GKKINK+DGIQRYKGLGEM+AKELWETTMDP+VRVL+QVTLDDAAAADELFSILM
Sbjct  606  EGLKSGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLKQVTLDDAAAADELFSILM  665

Query  653  GEDVDARRSFITRNAKDVRFLDV  675
            GEDV ARRSFI RNAKDVRFLDV
Sbjct  666  GEDVVARRSFIARNAKDVRFLDV  688



Lambda     K      H
   0.315    0.132    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1574031170976




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40