BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0007 Length=304 Score E Sequences producing significant alignments: (Bits) Value gi|308232617|ref|ZP_07416632.2| conserved membrane protein [Myco... 595 4e-168 gi|15607149|ref|NP_214521.1| hypothetical protein Rv0007 [Mycoba... 595 4e-168 gi|31791184|ref|NP_853677.1| hypothetical protein Mb0007 [Mycoba... 594 7e-168 gi|289756066|ref|ZP_06515444.1| conserved hypothetical protein [... 593 1e-167 gi|340625040|ref|YP_004743492.1| hypothetical protein MCAN_00061... 570 1e-160 gi|289441374|ref|ZP_06431118.1| conserved hypothetical protein [... 434 6e-120 gi|254233412|ref|ZP_04926738.1| hypothetical protein TBCG_00007 ... 427 8e-118 gi|339293087|gb|AEJ45198.1| hypothetical protein CCDC5079_0008 [... 413 1e-113 gi|118615926|ref|YP_904258.1| hypothetical protein MUL_0007 [Myc... 352 4e-95 gi|118462372|ref|YP_879310.1| hypothetical protein MAV_0007 [Myc... 352 4e-95 gi|41406105|ref|NP_958941.1| hypothetical protein MAP0007 [Mycob... 342 4e-92 gi|240172101|ref|ZP_04750760.1| hypothetical protein MkanA1_2248... 331 9e-89 gi|183980042|ref|YP_001848333.1| hypothetical protein MMAR_0007 ... 331 1e-88 gi|254773060|ref|ZP_05214576.1| hypothetical protein MaviaA2_000... 325 5e-87 gi|342862359|ref|ZP_08719000.1| hypothetical protein MCOL_25833 ... 322 3e-86 gi|296167136|ref|ZP_06849544.1| conserved hypothetical protein [... 307 1e-81 gi|254821355|ref|ZP_05226356.1| hypothetical protein MintA_15563... 293 3e-77 gi|15826872|ref|NP_301135.1| hypothetical protein ML0007 [Mycoba... 288 6e-76 gi|120401036|ref|YP_950865.1| hypothetical protein Mvan_0008 [My... 268 5e-70 gi|108796989|ref|YP_637186.1| hypothetical protein Mmcs_0008 [My... 266 3e-69 gi|145221414|ref|YP_001132092.1| hypothetical protein Mflv_0820 ... 262 5e-68 gi|315441704|ref|YP_004074583.1| hypothetical protein Mspyr1_000... 262 5e-68 gi|118470742|ref|YP_884430.1| hypothetical protein MSMEG_0007 [M... 248 6e-64 gi|169627128|ref|YP_001700777.1| hypothetical protein MAB_0020 [... 236 5e-60 gi|339296736|gb|AEJ48846.1| hypothetical protein CCDC5180_0009 [... 228 7e-58 gi|333988647|ref|YP_004521261.1| hypothetical protein JDM601_000... 224 1e-56 gi|325677510|ref|ZP_08157174.1| putative proline rich protein [R... 169 4e-40 gi|111020670|ref|YP_703642.1| proline rich protein [Rhodococcus ... 168 1e-39 gi|229491180|ref|ZP_04385008.1| putative proline rich protein [R... 168 1e-39 gi|134096628|ref|YP_001102289.1| hypothetical protein SACE_0010 ... 165 9e-39 gi|226303500|ref|YP_002763458.1| hypothetical protein RER_00110 ... 164 2e-38 gi|226362910|ref|YP_002780690.1| hypothetical protein ROP_34980 ... 164 2e-38 gi|54021972|ref|YP_116214.1| hypothetical protein nfa80 [Nocardi... 162 6e-38 gi|312137525|ref|YP_004004861.1| integral membrane protein [Rhod... 159 7e-37 gi|296137761|ref|YP_003645004.1| hypothetical protein Tpau_0011 ... 153 4e-35 gi|256374168|ref|YP_003097828.1| hypothetical protein Amir_0008 ... 147 2e-33 gi|326383916|ref|ZP_08205600.1| hypothetical protein SCNU_13323 ... 144 1e-32 gi|284988641|ref|YP_003407195.1| hypothetical protein Gobs_0012 ... 141 1e-31 gi|331693906|ref|YP_004330145.1| hypothetical protein Psed_0007 ... 141 1e-31 gi|330464885|ref|YP_004402628.1| hypothetical protein VAB18032_0... 139 4e-31 gi|262200053|ref|YP_003271261.1| hypothetical protein Gbro_0007 ... 138 9e-31 gi|333917687|ref|YP_004491268.1| hypothetical protein AS9A_0008 ... 136 4e-30 gi|300781945|ref|YP_003762236.1| hypothetical protein AMED_0008 ... 136 5e-30 gi|296392548|ref|YP_003657432.1| hypothetical protein Srot_0110 ... 135 8e-30 gi|343928741|ref|ZP_08768186.1| hypothetical protein GOALK_120_0... 135 9e-30 gi|302531363|ref|ZP_07283705.1| predicted protein [Streptomyces ... 131 2e-28 gi|159035683|ref|YP_001534936.1| hypothetical protein Sare_0009 ... 127 3e-27 gi|257054097|ref|YP_003131929.1| hypothetical protein Svir_00080... 126 5e-27 gi|324999889|ref|ZP_08121001.1| hypothetical protein PseP1_14021... 125 6e-27 gi|145592576|ref|YP_001156873.1| hypothetical protein Strop_0010... 125 9e-27 >gi|308232617|ref|ZP_07416632.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308369282|ref|ZP_07417162.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308370292|ref|ZP_07420935.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003] 21 more sequence titles Length=309 Score = 595 bits (1533), Expect = 4e-168, Method: Compositional matrix adjust. Identities = 304/304 (100%), Positives = 304/304 (100%), Gaps = 0/304 (0%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ Sbjct 6 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 65 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE Sbjct 66 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 125 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA Sbjct 126 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 185 Query 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV Sbjct 186 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 245 Query 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL Sbjct 246 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 305 Query 301 ADRD 304 ADRD Sbjct 306 ADRD 309 >gi|15607149|ref|NP_214521.1| hypothetical protein Rv0007 [Mycobacterium tuberculosis H37Rv] gi|15839379|ref|NP_334416.1| hypothetical protein MT0007 [Mycobacterium tuberculosis CDC1551] gi|121635890|ref|YP_976113.1| hypothetical protein BCG_0007 [Mycobacterium bovis BCG str. Pasteur 1173P2] 47 more sequence titles Length=304 Score = 595 bits (1533), Expect = 4e-168, Method: Compositional matrix adjust. Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +TAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ Sbjct 1 MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE Sbjct 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA Sbjct 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 Query 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV Sbjct 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 Query 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL Sbjct 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 Query 301 ADRD 304 ADRD Sbjct 301 ADRD 304 >gi|31791184|ref|NP_853677.1| hypothetical protein Mb0007 [Mycobacterium bovis AF2122/97] gi|31616769|emb|CAD92869.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length=304 Score = 594 bits (1531), Expect = 7e-168, Method: Compositional matrix adjust. Identities = 302/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +TAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ Sbjct 1 MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE Sbjct 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA Sbjct 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 Query 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV Sbjct 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 Query 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 GDLLNNASGSSAELVSSGTIFGGAFLIGLVN+VLMTALATIGAFVYNLITDLIGGIEVTL Sbjct 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNVVLMTALATIGAFVYNLITDLIGGIEVTL 300 Query 301 ADRD 304 ADRD Sbjct 301 ADRD 304 >gi|289756066|ref|ZP_06515444.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289696653|gb|EFD64082.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=304 Score = 593 bits (1528), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 302/304 (99%), Positives = 303/304 (99%), Gaps = 0/304 (0%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +TAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGH Q Sbjct 1 MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHHQ 60 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE Sbjct 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA Sbjct 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 Query 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV Sbjct 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 Query 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL Sbjct 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 Query 301 ADRD 304 ADRD Sbjct 301 ADRD 304 >gi|340625040|ref|YP_004743492.1| hypothetical protein MCAN_00061 [Mycobacterium canettii CIPT 140010059] gi|340003230|emb|CCC42347.1| putative conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=304 Score = 570 bits (1469), Expect = 1e-160, Method: Compositional matrix adjust. Identities = 292/304 (97%), Positives = 295/304 (98%), Gaps = 0/304 (0%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +TAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQA RQ Sbjct 1 MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAAQRQ 60 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 PPPVSH EGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQP+PDASLG GDG PAE Sbjct 61 PPPVSHLEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPEPDASLGSGDGPPAE 120 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 YASELPDLSGP PRAPQRNPAPARPAE GAGSRGDSAAGSSGGRSITAE R+ARVQLSA Sbjct 121 TYASELPDLSGPAPRAPQRNPAPARPAEAGAGSRGDSAAGSSGGRSITAEGREARVQLSA 180 Query 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV Sbjct 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 Query 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL Sbjct 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 Query 301 ADRD 304 ADRD Sbjct 301 ADRD 304 >gi|289441374|ref|ZP_06431118.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289414293|gb|EFD11533.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=223 Score = 434 bits (1117), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 222/223 (99%), Positives = 223/223 (100%), Gaps = 0/223 (0%) Query 82 LNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNP 141 +NRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNP Sbjct 1 MNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNP 60 Query 142 APARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWST 201 APARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWST Sbjct 61 APARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWST 120 Query 202 LKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIF 261 LKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIF Sbjct 121 LKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIF 180 Query 262 GGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 GGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD Sbjct 181 GGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 223 >gi|254233412|ref|ZP_04926738.1| hypothetical protein TBCG_00007 [Mycobacterium tuberculosis C] gi|124603205|gb|EAY61480.1| hypothetical protein TBCG_00007 [Mycobacterium tuberculosis C] Length=221 Score = 427 bits (1099), Expect = 8e-118, Method: Compositional matrix adjust. Identities = 219/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +TAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ Sbjct 1 MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE Sbjct 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA Sbjct 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 Query 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITV 220 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITV Sbjct 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITV 220 >gi|339293087|gb|AEJ45198.1| hypothetical protein CCDC5079_0008 [Mycobacterium tuberculosis CCDC5079] Length=212 Score = 413 bits (1062), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 211/212 (99%), Positives = 212/212 (100%), Gaps = 0/212 (0%) Query 93 VTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAG 152 +TGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAG Sbjct 1 MTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAG 60 Query 153 SRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVAL 212 SRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVAL Sbjct 61 SRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVAL 120 Query 213 FFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNI 272 FFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNI Sbjct 121 FFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNI 180 Query 273 VLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 VLMTALATIGAFVYNLITDLIGGIEVTLADRD Sbjct 181 VLMTALATIGAFVYNLITDLIGGIEVTLADRD 212 >gi|118615926|ref|YP_904258.1| hypothetical protein MUL_0007 [Mycobacterium ulcerans Agy99] gi|118568036|gb|ABL02787.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=332 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 208/306 (68%), Positives = 229/306 (75%), Gaps = 8/306 (2%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +T+PN+PGA + GD N D VDR G HRA GPGR+PD D PPWQR A R G R Sbjct 1 MTSPNDPGAPNMGDNFNGDAAVDRSGVHRAGPGPGRLPDPADSPPWQRGAARPGNPGPRP 60 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 P EGR P +AADARL+RFISG SAP GPA V+ P P+ +A G+ PAE Sbjct 61 PE--QSGEGRVPGPTSAADARLSRFISGTSAPAGGPAP-VKAPPPEAEAPPVRGENLPAE 117 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSS-GGRSITAESRDARVQLS 179 YASELPDLSGP PR QR PAP R G S D AG++ G + ESR++R Q+S Sbjct 118 VYASELPDLSGPAPRPVQRKPAPDR---GADNSGADPMAGAARSGAAEARESRESRFQVS 174 Query 180 ARRS-RGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNS 238 +RR+ RGPVRASMQIRRIDPWSTLKVS LLSVALFF+WMI VAFLYLVLGGMGVWAKLNS Sbjct 175 SRRAARGPVRASMQIRRIDPWSTLKVSALLSVALFFIWMIAVAFLYLVLGGMGVWAKLNS 234 Query 239 NVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEV 298 NVGDLLNN SGSSAELVSSGTIFGGA LIGLVNIVLMTA+ATI AF YNL TDLIGGIEV Sbjct 235 NVGDLLNNTSGSSAELVSSGTIFGGAVLIGLVNIVLMTAMATIAAFTYNLATDLIGGIEV 294 Query 299 TLADRD 304 TLADRD Sbjct 295 TLADRD 300 >gi|118462372|ref|YP_879310.1| hypothetical protein MAV_0007 [Mycobacterium avium 104] gi|118163659|gb|ABK64556.1| conserved hypothetical protein [Mycobacterium avium 104] Length=287 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 201/312 (65%), Positives = 226/312 (73%), Gaps = 33/312 (10%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGP---GRIPDAGDPPPWQRAATRQSQAG 57 +++PNEPGA KG+ PN DG +R G RA T P GR P+AGD PPWQR +TR Sbjct 1 MSSPNEPGAPKKGETPNGDGSAERAGVRRA-TPPAPGGRAPEAGDGPPWQRGSTRP---- 55 Query 58 HRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGS 117 +QPPP + P A+ARLNRFISG +AP G A+ + P+ G+G Sbjct 56 -QQPPPRQNEPPTEKRPGGGAEARLNRFISGTAAP--GTASHAKEPE--------RGEGP 104 Query 118 PAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDAR-- 175 PAEAYASELPDLSGP PR P R PA R AE + G GGR ++ ESR+ R Sbjct 105 PAEAYASELPDLSGPVPRGPHRKPAAERGAE--------TTGGQGGGRPVSGESREGRDN 156 Query 176 ---VQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGV 232 VQ+S RR+RGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMI VAFLYLVLGGMGV Sbjct 157 RDRVQVS-RRTRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMIAVAFLYLVLGGMGV 215 Query 233 WAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDL 292 W+KLNSNVGDLLNN SGSS ELVSSGTIFGGA LIGLVNIVL+TA+ATI AF+YNL TDL Sbjct 216 WSKLNSNVGDLLNNTSGSSGELVSSGTIFGGAVLIGLVNIVLLTAMATIAAFIYNLATDL 275 Query 293 IGGIEVTLADRD 304 IGGIEVTLADRD Sbjct 276 IGGIEVTLADRD 287 >gi|41406105|ref|NP_958941.1| hypothetical protein MAP0007 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394453|gb|AAS02324.1| hypothetical protein MAP_0007 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459822|gb|EGO38736.1| Transmembrane domain of unknown function (DUF3566) [Mycobacterium avium subsp. paratuberculosis S397] Length=283 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 199/314 (64%), Positives = 222/314 (71%), Gaps = 41/314 (13%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGP---GRIPDAGDPPPWQRAATRQSQAG 57 +++PNEPGA KG+ PN DG +R G RA T P GR P+AGD PPWQR +TR Q Sbjct 1 MSSPNEPGAPKKGETPNGDGSAERAGVRRA-TPPAPGGRAPEAGDGPPWQRGSTRPQQPP 59 Query 58 HRQ--PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGD 115 RQ PP +G A+ARLNRFISG A+ + P+ G+ Sbjct 60 PRQNEPPTEKRADG------GGAEARLNRFISGT-------ASHAKEPE--------RGE 98 Query 116 GSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDAR 175 G PAEAYASELPDLSGP PR P R PA R AE + G GGR ++ ESR+ R Sbjct 99 GPPAEAYASELPDLSGPVPRGPHRKPAAERGAE--------TTGGQGGGRPVSGESREGR 150 Query 176 -----VQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGM 230 VQ+S RR+RGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMI VAFLYLVLGGM Sbjct 151 DNRDRVQVS-RRTRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMIAVAFLYLVLGGM 209 Query 231 GVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLIT 290 GVW+KLNSNVGDLLNN SGSS ELVSSGTIFGGA LIGLVNIVL+TA+ATI AF+YNL T Sbjct 210 GVWSKLNSNVGDLLNNTSGSSGELVSSGTIFGGAVLIGLVNIVLLTAMATIAAFIYNLAT 269 Query 291 DLIGGIEVTLADRD 304 DLIGGIEVTLADRD Sbjct 270 DLIGGIEVTLADRD 283 >gi|240172101|ref|ZP_04750760.1| hypothetical protein MkanA1_22485 [Mycobacterium kansasii ATCC 12478] Length=228 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 175/235 (75%), Positives = 191/235 (82%), Gaps = 8/235 (3%) Query 70 RPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDL 129 RP P +A DARLNRFI+G SAP P+ V+T P+PD DG P EAYASELPDL Sbjct 2 RPPGPSSAVDARLNRFITGTSAPSGAPSGPVKTSAPEPDDVPARSDGPPVEAYASELPDL 61 Query 130 SGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRA 189 SGP PRA QR AP RP + A + ++ R++T ESR++RVQ+S RR RGPVRA Sbjct 62 SGPIPRA-QRRSAPDRPVDAPATT-------TTASRAVTTESRESRVQVSPRRGRGPVRA 113 Query 190 SMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASG 249 SMQIRRIDPWSTLKVSLLLSVALFFVWMI+VAFLYLVLGGMGVWAKLNSNVGDLLNN SG Sbjct 114 SMQIRRIDPWSTLKVSLLLSVALFFVWMISVAFLYLVLGGMGVWAKLNSNVGDLLNNTSG 173 Query 250 SSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 SSAELVSSGTIFGGA LIGLVNIVLMTA+ATIGAFVYNL TDLIGGIEVTLADRD Sbjct 174 SSAELVSSGTIFGGAVLIGLVNIVLMTAMATIGAFVYNLTTDLIGGIEVTLADRD 228 >gi|183980042|ref|YP_001848333.1| hypothetical protein MMAR_0007 [Mycobacterium marinum M] gi|183173368|gb|ACC38478.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=300 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 202/305 (67%), Positives = 222/305 (73%), Gaps = 6/305 (1%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +T+PN+PGA + GD N D VDR G HRA TGPGR+PD D PPWQR A R G R Sbjct 1 MTSPNDPGAPNMGDNFNGDAAVDRSGVHRAGTGPGRLPDPADSPPWQRGAARPGNPGPRP 60 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAE 120 P EGR P +AADARL+RFISG SAP PA P + G+ PAE Sbjct 61 PE--QSGEGRVPGPTSAADARLSRFISGTSAPAGAPAPVKAPPPEAEAPPV-RGENLPAE 117 Query 121 AYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 AYASELPDLSGP PR QR PAP R A+ A + + ESR++R Q+S+ Sbjct 118 AYASELPDLSGPAPRPVQRKPAPDRGADNSGAH--PVAGAARSAAAEARESRESRFQVSS 175 Query 181 RRS-RGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSN 239 RR+ RGPVRASMQIRRIDPWSTLKVS LLSVALFF+WMI VAFLYLVLGGMGVWAKLNSN Sbjct 176 RRAARGPVRASMQIRRIDPWSTLKVSALLSVALFFIWMIAVAFLYLVLGGMGVWAKLNSN 235 Query 240 VGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVT 299 VGDLLNN SGSSAELVSSGTIFGGA LIGLVNIVLMTA+ATI AF+YNL TDLIGGIEVT Sbjct 236 VGDLLNNTSGSSAELVSSGTIFGGAVLIGLVNIVLMTAMATIAAFIYNLATDLIGGIEVT 295 Query 300 LADRD 304 LADRD Sbjct 296 LADRD 300 >gi|254773060|ref|ZP_05214576.1| hypothetical protein MaviaA2_00035 [Mycobacterium avium subsp. avium ATCC 25291] Length=261 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 182/275 (67%), Positives = 203/275 (74%), Gaps = 29/275 (10%) Query 35 GRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVT 94 GR P+AGD PPWQR +TR +QPPP + P A+ARLNRFISG +AP Sbjct 11 GRAPEAGDGPPWQRGSTRP-----QQPPPRQNEPPTEKRPGGGAEARLNRFISGTAAP-- 63 Query 95 GPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSR 154 G A+ + P+ G+G PAEAYASELPDLSGP PR P R PA R AE Sbjct 64 GTASHAKEPE--------RGEGPPAEAYASELPDLSGPVPRGPHRKPAAERGAE------ 109 Query 155 GDSAAGSSGGRSITAESRDAR-----VQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLS 209 + G GGR ++ ESR+ R VQ+S RR+RGPVRASMQIRRIDPWSTLKVSLLLS Sbjct 110 --TTGGQGGGRPVSGESREGRDNRDRVQVS-RRTRGPVRASMQIRRIDPWSTLKVSLLLS 166 Query 210 VALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGL 269 VALFFVWMI VAFLYLVLGGMGVW+KLNSNVGDLLNN SGSS ELVSSGTIFGGA LIG+ Sbjct 167 VALFFVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLNNTSGSSGELVSSGTIFGGAVLIGV 226 Query 270 VNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 VNIVL+TA+ATI AF+YNL TDLIGGIEVTLADRD Sbjct 227 VNIVLLTAMATIAAFIYNLATDLIGGIEVTLADRD 261 >gi|342862359|ref|ZP_08719000.1| hypothetical protein MCOL_25833 [Mycobacterium colombiense CECT 3035] gi|342130216|gb|EGT83544.1| hypothetical protein MCOL_25833 [Mycobacterium colombiense CECT 3035] Length=267 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 181/272 (67%), Positives = 199/272 (74%), Gaps = 17/272 (6%) Query 35 GRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVT 94 GR + GD PPWQR R Q G RQ P + E RP+ +ARLNRFISG +AP Sbjct 11 GRSQEGGDGPPWQRGTARPQQPGSRQGEPPT--EKRPSGQTGGVEARLNRFISGTAAP-- 66 Query 95 GPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSR 154 G + + P+P G+ SP +AYASELPDLSGP PR P R P P RPAE + S Sbjct 67 GAPSHAKEPEP------ARGEASPTDAYASELPDLSGPLPRGPHRKPTPERPAESSSSSG 120 Query 155 GDS--AAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVAL 212 A + GR E RD RVQ+S RR+RGPVRASMQIRRIDPWSTLKVSLLLSVAL Sbjct 121 AGRSATAETRDGR----EGRDNRVQVS-RRTRGPVRASMQIRRIDPWSTLKVSLLLSVAL 175 Query 213 FFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNI 272 FFVWMI VAFLYLVLGGMGVW+KLNSNVGDLLNN SGSS ELVSSGTIFGGA LIGLVNI Sbjct 176 FFVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLNNTSGSSGELVSSGTIFGGAVLIGLVNI 235 Query 273 VLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 VL+TA+ATI AFVYNL TDLIGG+EVTLADRD Sbjct 236 VLLTAMATIAAFVYNLTTDLIGGVEVTLADRD 267 >gi|296167136|ref|ZP_06849544.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897519|gb|EFG77117.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=231 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 170/237 (72%), Positives = 184/237 (78%), Gaps = 9/237 (3%) Query 70 RPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDL 129 R PP+ +ARLNRFISG +AP G + P D DA G GDG PAEAYASELPDL Sbjct 2 RQPEPPSGVEARLNRFISGTAAP--GAPHQAKNPPHDTDAPPGRGDGPPAEAYASELPDL 59 Query 130 SGPTPRAPQRNPAPARPAEGG--AGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPV 187 SGP PR PQR P R +E AGS SA + GR ++R+ R Q++ RR RGPV Sbjct 60 SGPLPRGPQRKPPADRTSEASTTAGSARSSAPENREGR----DTRENRTQVT-RRPRGPV 114 Query 188 RASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNA 247 RASMQIRRIDPWSTLKVSLLLSVALFFVWMI VAFLYLVLGGMGVW+KLNSNVGDLLNN Sbjct 115 RASMQIRRIDPWSTLKVSLLLSVALFFVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLNNT 174 Query 248 SGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 SGSS ELVSSGTIFGGA LIGLVNIVL+TA+ATI AFVYNL TDLIGGIEVTLADRD Sbjct 175 SGSSGELVSSGTIFGGAVLIGLVNIVLLTAMATIAAFVYNLTTDLIGGIEVTLADRD 231 >gi|254821355|ref|ZP_05226356.1| hypothetical protein MintA_15563 [Mycobacterium intracellulare ATCC 13950] Length=233 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 167/243 (69%), Positives = 180/243 (75%), Gaps = 22/243 (9%) Query 68 EGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELP 127 E RP+ P +ARLNRFISG T A + +GSPAEAYASELP Sbjct 7 EKRPSGPAGGVEARLNRFISG-----TAAPGAGAAAHAKDADAAPAREGSPAEAYASELP 61 Query 128 DLSGPTPRAPQRNPAPA-RPAEGGAGSRGDSAAGSSGGRSITAESRDAR-----VQLSAR 181 DLSGP PR P R PAP R E +G+ GR T+ESR+AR VQ+S R Sbjct 62 DLSGPLPRGPHRKPAPEQRTPESPSGA----------GRPSTSESREARENRDRVQVS-R 110 Query 182 RSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVG 241 R+RGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMI VAFLYLVLGGMGVW+KLNSNVG Sbjct 111 RTRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMIAVAFLYLVLGGMGVWSKLNSNVG 170 Query 242 DLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLA 301 DLLNN SGSS ELVSSGTIFGGA LIGLVNIVL+TA+ATI AFVYNL TDLIGGIEVTLA Sbjct 171 DLLNNTSGSSGELVSSGTIFGGAVLIGLVNIVLLTAMATIAAFVYNLTTDLIGGIEVTLA 230 Query 302 DRD 304 DRD Sbjct 231 DRD 233 >gi|15826872|ref|NP_301135.1| hypothetical protein ML0007 [Mycobacterium leprae TN] gi|221229350|ref|YP_002502766.1| hypothetical protein MLBr_00007 [Mycobacterium leprae Br4923] gi|17367947|sp|O32870.1|Y007_MYCLE RecName: Full=Uncharacterized protein ML0007 gi|2344820|emb|CAA94717.1| hypothetical protein [Mycobacterium leprae] gi|13092419|emb|CAC29515.1| putative membrane protein [Mycobacterium leprae] gi|219932457|emb|CAR70100.1| putative membrane protein [Mycobacterium leprae Br4923] Length=303 Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 170/317 (54%), Positives = 202/317 (64%), Gaps = 27/317 (8%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPG---------RIPDAGDPPPWQRAAT 51 +T+PNE A + D DG V+R G HRA + PG P+ D PPWQR + Sbjct 1 MTSPNESRAFNAADDLIGDGSVERAGLHRATSVPGESSEGLQRGHSPEPNDSPPWQRGSA 60 Query 52 RQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAP-VTGPAAAVRTPQPDPDAS 110 R SQ+G+R P++ R +NP A+ R NRFISG +AP ++G + Sbjct 61 RASQSGYRPSDPLT--TTRQSNPAPGANVRSNRFISGMTAPALSGQLPKKNNSTQALEPV 118 Query 111 LGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAE 170 L + E+YASELPDLSGP R P+P R G + R GR + Sbjct 119 LMSNEVPFTESYASELPDLSGPVQRTVPCKPSPDR---GSSTPRM--------GRLEITK 167 Query 171 SR---DARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVL 227 R + R Q+S RRS GPVRASMQIRRIDPWS LKVSLLLSVALFFVWMI VAFLYL+L Sbjct 168 VRGTGEIRSQIS-RRSHGPVRASMQIRRIDPWSMLKVSLLLSVALFFVWMIAVAFLYLLL 226 Query 228 GGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYN 287 GGMGVWAKLNSNVGDLLNN G+S ELVS+ TIFG A L+GLVNIVLMT +A I AFVYN Sbjct 227 GGMGVWAKLNSNVGDLLNNTGGNSGELVSNSTIFGCAVLVGLVNIVLMTTMAAIAAFVYN 286 Query 288 LITDLIGGIEVTLADRD 304 L +DL+GG+EVTLAD D Sbjct 287 LSSDLVGGVEVTLADLD 303 >gi|120401036|ref|YP_950865.1| hypothetical protein Mvan_0008 [Mycobacterium vanbaalenii PYR-1] gi|119953854|gb|ABM10859.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=301 Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 173/321 (54%), Positives = 195/321 (61%), Gaps = 37/321 (11%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQ 60 +++P EPG GD N G H P + D PPWQR +A Q Sbjct 1 MSSPQEPGYPRAGDAANGPAAGPAGSGHDGGPRPAHTAEGADVPPWQRGPA--GRARQHQ 58 Query 61 PPPVSHPEGRPTNPPAAADARLNRFISGASAPV----TGPAAA--------VRT----PQ 104 P + EG N P DARLNRF++G SAP T PA A VRT P+ Sbjct 59 APEGAQGEGPRPNAPGGLDARLNRFMAGGSAPAGSQETEPAPAPRNARTEVVRTEGNRPE 118 Query 105 PDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGG 164 P P G AYASE+PDLSGP P PQ+ RP A +G Sbjct 119 PGPRPDQGA-------AYASEIPDLSGPRP--PQQRKPVDRPVPEQQPKPTPKPAPPAGN 169 Query 165 RSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLY 224 R+ VQ++ R GPVRASMQIRR+DPWSTLKVSLLLSV LFFVWMI VAFLY Sbjct 170 RA---------VQVATRAHTGPVRASMQIRRVDPWSTLKVSLLLSVVLFFVWMIAVAFLY 220 Query 225 LVLGGMGVWAKLNSNVGDLLNNASGSS-AELVSSGTIFGGAFLIGLVNIVLMTALATIGA 283 LVLGGMGVW+KLNSNVGDLL +ASGSS ELVSSGTIFGGA LIGLVNIVL+TA ATIGA Sbjct 221 LVLGGMGVWSKLNSNVGDLLTSASGSSGGELVSSGTIFGGAALIGLVNIVLLTAAATIGA 280 Query 284 FVYNLITDLIGGIEVTLADRD 304 F+YNL TDL+GG+EVTLADRD Sbjct 281 FIYNLTTDLVGGVEVTLADRD 301 >gi|108796989|ref|YP_637186.1| hypothetical protein Mmcs_0008 [Mycobacterium sp. MCS] gi|119866073|ref|YP_936025.1| hypothetical protein Mkms_0016 [Mycobacterium sp. KMS] gi|126432621|ref|YP_001068312.1| hypothetical protein Mjls_0008 [Mycobacterium sp. JLS] gi|108767408|gb|ABG06130.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692162|gb|ABL89235.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126232421|gb|ABN95821.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=290 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 159/274 (59%), Positives = 180/274 (66%), Gaps = 35/274 (12%) Query 39 DAGDPPPWQRAA-TRQSQAGHRQPPPVSHPE--GRPTNPPAAADARLNRFISGASAPV-- 93 + GD PPWQR R Q+ + P P G PT+ P A +RF SAP Sbjct 44 EGGDVPPWQRGRPNRPPQSRAQDAPTRQEPSRGGSPTHAPGAEARNTSRFPVSGSAPTEE 103 Query 94 -TGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAG 152 PAA VRTP+ + EAYASELPDLSGP PR PQR PA RPA Sbjct 104 TKAPAAPVRTPE--------RTEAPRPEAYASELPDLSGPVPRPPQRKPATDRPA----- 150 Query 153 SRGDSAAGSSGGRSITAESRDA-RVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVA 211 A +R A R Q+ R +RGPVRASMQIRR+DPWS LKVSL+LSVA Sbjct 151 --------------TEAPARPAARTQVGQRPARGPVRASMQIRRVDPWSALKVSLVLSVA 196 Query 212 LFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSS-AELVSSGTIFGGAFLIGLV 270 LFFVWMI VAFLYLVLGGMGVW+KLNSNVGDLL +ASGSS ELVSS TIFGGA L+GLV Sbjct 197 LFFVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLTSASGSSGGELVSSSTIFGGAALVGLV 256 Query 271 NIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 NIV++TA+AT GAF+YNL TDL+GG+EVTLADRD Sbjct 257 NIVILTAMATAGAFIYNLTTDLVGGVEVTLADRD 290 >gi|145221414|ref|YP_001132092.1| hypothetical protein Mflv_0820 [Mycobacterium gilvum PYR-GCK] gi|145213900|gb|ABP43304.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=314 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 175/343 (52%), Positives = 201/343 (59%), Gaps = 68/343 (19%) Query 1 VTAPNEPGALSKGDGPN-ADGLVDRGGA--HRAATGPGRIPDAGDPPPWQRA-ATRQSQA 56 +++P EPG GDG A+G + A H A P + D + PPWQR ATR Q Sbjct 1 MSSPKEPGPAHAGDGAAPAEGPGNGSAAPGHDAGARPAHVADTTELPPWQRGPATRARQ- 59 Query 57 GHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRT-------------- 102 Q P P+G A DARLNRF++G SAP P A R Sbjct 60 -QPQAPESPRPDGPRGGGQAGLDARLNRFMAGGSAPSGAPDAPPRNEPPRNDPPRNEPAP 118 Query 103 ---------PQPDPDASLGCGDGSPAEAYASELPDLSGPT-----------PRAPQRNPA 142 P+P P G +G+ AYASELPDLSGP P + PA Sbjct 119 RNDRTDVVRPEPKPRPEGGRPEGA---AYASELPDLSGPRPPQPPRKPVERPSTESKPPA 175 Query 143 PARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTL 202 P+ G RVQ+++R+ RGPVRASMQIRR+DPWSTL Sbjct 176 KGSPSPAG------------------------RVQVASRQHRGPVRASMQIRRVDPWSTL 211 Query 203 KVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSS-AELVSSGTIF 261 KVSLLLSV LFFVWMI VAFLYLVLGGMGVW+KLNSNVGDLL +ASGSS ELVSSGTIF Sbjct 212 KVSLLLSVVLFFVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLTSASGSSGGELVSSGTIF 271 Query 262 GGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 GGA LIGLVNIVL+TA ATIGAF+YNL TDL+GG+EVTLADRD Sbjct 272 GGAALIGLVNIVLLTAGATIGAFIYNLTTDLVGGVEVTLADRD 314 >gi|315441704|ref|YP_004074583.1| hypothetical protein Mspyr1_00080 [Mycobacterium sp. Spyr1] gi|315260007|gb|ADT96748.1| hypothetical protein Mspyr1_00080 [Mycobacterium sp. Spyr1] Length=314 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 174/343 (51%), Positives = 200/343 (59%), Gaps = 68/343 (19%) Query 1 VTAPNEPGALSKGDGPN-ADGLVDRGGA--HRAATGPGRIPDAGDPPPWQRA-ATRQSQA 56 +++P EPG GDG A+G + A H A P + D + PPWQR ATR Q Sbjct 1 MSSPKEPGPAHAGDGAAPAEGPGNGSAAPGHDAGARPAHVADTTELPPWQRGPATRARQ- 59 Query 57 GHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRT-------------- 102 Q P P+G DARLNRF++G SAP P A R Sbjct 60 -QSQAPEAPRPDGPRGGNQGGLDARLNRFMAGGSAPSGAPDAPPRNEPPRNDPPRNEPAP 118 Query 103 ---------PQPDPDASLGCGDGSPAEAYASELPDLSGPT-----------PRAPQRNPA 142 P+P P G +G+ AYASELPDLSGP P + PA Sbjct 119 RNDRTDVVRPEPKPRPEGGRPEGA---AYASELPDLSGPRPPQPPRKPVERPSTESKPPA 175 Query 143 PARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTL 202 P+ G RVQ+++R+ RGPVRASMQIRR+DPWSTL Sbjct 176 KGSPSPAG------------------------RVQVASRQHRGPVRASMQIRRVDPWSTL 211 Query 203 KVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSS-AELVSSGTIF 261 KVSLLLSV LFFVWMI VAFLYLVLGGMGVW+KLNSNVGDLL +ASGSS ELVSSGTIF Sbjct 212 KVSLLLSVVLFFVWMIAVAFLYLVLGGMGVWSKLNSNVGDLLTSASGSSGGELVSSGTIF 271 Query 262 GGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 GGA LIGLVNIVL+TA ATIGAF+YNL TDL+GG+EVTLADRD Sbjct 272 GGAALIGLVNIVLLTAGATIGAFIYNLTTDLVGGVEVTLADRD 314 >gi|118470742|ref|YP_884430.1| hypothetical protein MSMEG_0007 [Mycobacterium smegmatis str. MC2 155] gi|118172029|gb|ABK72925.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=260 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 155/312 (50%), Positives = 188/312 (61%), Gaps = 60/312 (19%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGG-----AHRAATGPGRIPDAGDPPPWQRAATRQSQ 55 +++PNEPG GD P A GG + + G I D+GD PPWQR +R +Q Sbjct 1 MSSPNEPGYPRAGDRPGATNGTGPGGDSGALSSNSTRATGHITDSGDVPPWQRGVSRTAQ 60 Query 56 AGHRQP-PPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCG 114 QP P+ E +P P + +P P+ Sbjct 61 ----QPGQPLGDTEQQPRPAPRPEPRETRQ-------------------EPRPEHR---- 93 Query 115 DGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDA 174 EAYASELPDLSGP PR+PQR +G + A + Sbjct 94 ----TEAYASELPDLSGPVPRSPQRK---------------------TGADAPRASAPTT 128 Query 175 RVQLSAR-RSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVW 233 R+Q++ R + GPVRASMQIRR+DPW+ LKVSL+LSV LFFVWMI VAFLYLVLGGMGVW Sbjct 129 RIQVANRPQPSGPVRASMQIRRVDPWTVLKVSLVLSVVLFFVWMIAVAFLYLVLGGMGVW 188 Query 234 AKLNSNVGDLLNNASGSS-AELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDL 292 +KLNSNVGDLL +ASGSS ELVSSGTIFGGA LIGLVNIV+++A+AT+GAF+YNL TDL Sbjct 189 SKLNSNVGDLLTSASGSSGGELVSSGTIFGGAALIGLVNIVVLSAMATVGAFIYNLTTDL 248 Query 293 IGGIEVTLADRD 304 +GGIEVTLADRD Sbjct 249 VGGIEVTLADRD 260 >gi|169627128|ref|YP_001700777.1| hypothetical protein MAB_0020 [Mycobacterium abscessus ATCC 19977] gi|169239095|emb|CAM60123.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=313 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 161/347 (47%), Positives = 192/347 (56%), Gaps = 77/347 (22%) Query 1 VTAPNEPGA-------LSKGDGPNADGLVDRGGAHRAATGPGRIPD----AGDPPPWQRA 49 +++PN+PG + + D P R G+H AATGP RIPD G P Sbjct 1 MSSPNDPGESGANERPVDQADLPPWQRAERRRGSHAAATGPQRIPDREPRPGGAPTEIIP 60 Query 50 ATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAP---VTGPAAAVRTPQPD 106 + A P P GRP+ A DARL+RFISG +AP T PA A P+P+ Sbjct 61 IVDDASAPPTAPTSAPRPSGRPS---AGLDARLSRFISGTAAPAGFTTPPARAEADPEPE 117 Query 107 PDASL-----------------------GCGDGSPAEAYAS-----ELPDLSGPTPRAPQ 138 P + G P A S +LPDLSGP PR P+ Sbjct 118 PYDEVPERPERSERADRPEPPRAGTPWGESGAQEPVRASKSALKNEDLPDLSGPVPRPPR 177 Query 139 RNPAPARPAEGGAGSRGDSAAGSSGGRSITA-ESRDARVQLSARRSRGPVRASMQIRRID 197 R+ A + GG ++T SR RGP+RA+MQIRRID Sbjct 178 RSDA------------------AQGGSAVTVGPSR-----------RGPLRAAMQIRRID 208 Query 198 PWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSS 257 PW+TLKVSL+LSV FFVWMI VA LYLVLG MGVW+KLN NVG+L+ N+ G ELVSS Sbjct 209 PWATLKVSLVLSVVFFFVWMIAVAMLYLVLGAMGVWSKLNENVGELITNSGG--GELVSS 266 Query 258 GTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 GTIFG A LIGLVNIVLMTA ATIGAF+YNL TDL+GGIE+TLADRD Sbjct 267 GTIFGTALLIGLVNIVLMTAAATIGAFIYNLTTDLVGGIEITLADRD 313 >gi|339296736|gb|AEJ48846.1| hypothetical protein CCDC5180_0009 [Mycobacterium tuberculosis CCDC5180] Length=114 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 114/114 (100%), Positives = 114/114 (100%), Gaps = 0/114 (0%) Query 191 MQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGS 250 MQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGS Sbjct 1 MQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGS 60 Query 251 SAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 SAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD Sbjct 61 SAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 114 >gi|333988647|ref|YP_004521261.1| hypothetical protein JDM601_0007 [Mycobacterium sp. JDM601] gi|333484615|gb|AEF34007.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=282 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 153/321 (48%), Positives = 177/321 (56%), Gaps = 56/321 (17%) Query 1 VTAPNEPGALSKGDGPNADGLVDRGGA----HRAATGPGRIPDAGDPPPWQRAATRQSQA 56 ++APNEPG G GP G A R PGR+ D G+PPPWQR + A Sbjct 1 MSAPNEPG--HPGSGPGKAESAGSGSADVAGQRPVARPGRVADTGEPPPWQRGGQSRPPA 58 Query 57 GHRQPPPVSHPEGRPTNPPAAA------DARLNRFISGASAP-------VTGPAAAVRTP 103 R P E + P AA D RL RF+SG +AP PA P Sbjct 59 AARPAEPARPAEPARSAEPNAAGHSPGVDERLRRFVSGTAAPGAPQPAKPAKPAKQTAKP 118 Query 104 QPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSG 163 P + + Y SELPDLS P R P PAR Sbjct 119 VQPPAKPAPAAHAATDDTYGSELPDLSEPAQRRP-----PAR------------------ 155 Query 164 GRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFL 223 R Q+SA RGPVRASMQIRRIDPWS LKVSLLLS ALFFVWMI VA L Sbjct 156 -----------RTQVSAG-PRGPVRASMQIRRIDPWSALKVSLLLSTALFFVWMIAVAVL 203 Query 224 YLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGA 283 Y++LG MGVW KLNSNVGDLL N S+AELVS +IFGGA LIGLVN+V++TA+AT+G Sbjct 204 YVMLGAMGVWNKLNSNVGDLLTN--NSAAELVSGSSIFGGAALIGLVNVVVLTAMATLGV 261 Query 284 FVYNLITDLIGGIEVTLADRD 304 +YNL TD++GG+EVTLADRD Sbjct 262 VIYNLSTDVVGGVEVTLADRD 282 >gi|325677510|ref|ZP_08157174.1| putative proline rich protein [Rhodococcus equi ATCC 33707] gi|325551757|gb|EGD21455.1| putative proline rich protein [Rhodococcus equi ATCC 33707] Length=354 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 122/304 (41%), Positives = 157/304 (52%), Gaps = 69/304 (22%) Query 28 HRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGR-----PTNPPAAADARL 82 R A G P PPWQR G +Q PP P G P PPA A Sbjct 93 ERGADGAKPDPKPVQTPPWQR--------GQQQKPPAQGPNGSARPEAPGKPPAKAQP-A 143 Query 83 NRFISGASAP-------------VTGPAAAVRTPQPD----PDASLGCGDGSPAEA---- 121 ++G +AP VTG AA + P D A DG P + Sbjct 144 RPVVTGTAAPKPPQGDGRPARPVVTG-TAAPKPPAADRRDVAKAKAAAIDG-PTRSIART 201 Query 122 -YASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSA 180 A ++PDLS PR RPA G A +AA + G Sbjct 202 DLAKDMPDLSA-VPRQ--------RPASGSARKAALTAAVTEDGE--------------- 237 Query 181 RRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNV 240 P+RA++Q+RRIDPWSTLKVSL++SVALFFVWM+ V LYLVL GMGVW +LN+ Sbjct 238 -----PLRATVQLRRIDPWSTLKVSLVISVALFFVWMVAVGLLYLVLDGMGVWDRLNNAF 292 Query 241 GDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTL 300 + ++SG LV+SG +FG + L+G++N+VL TALATIG+F+YNL +DL+GG++VTL Sbjct 293 TEFTTDSSGGG--LVTSGQVFGYSALVGVMNVVLFTALATIGSFIYNLCSDLVGGVQVTL 350 Query 301 ADRD 304 AD D Sbjct 351 ADPD 354 >gi|111020670|ref|YP_703642.1| proline rich protein [Rhodococcus jostii RHA1] gi|110820200|gb|ABG95484.1| possible proline rich protein [Rhodococcus jostii RHA1] Length=467 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 73/118 (62%), Positives = 97/118 (83%), Gaps = 2/118 (1%) Query 187 VRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNN 246 +RA++Q+R+IDPWSTLK+S ++SV+LFFVWM+ V LY+VL GMGVW +LN+ D++ Sbjct 352 LRATVQVRKIDPWSTLKISSVISVSLFFVWMVAVGLLYVVLDGMGVWDRLNNAFTDIV-- 409 Query 247 ASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 A SS LV++G +FG A +IGL N+VL TALATIGAF+YNL +DL+GG+EVTLADRD Sbjct 410 AESSSDGLVTAGQVFGYAAVIGLANMVLFTALATIGAFIYNLCSDLVGGVEVTLADRD 467 >gi|229491180|ref|ZP_04385008.1| putative proline rich protein [Rhodococcus erythropolis SK121] gi|229321918|gb|EEN87711.1| putative proline rich protein [Rhodococcus erythropolis SK121] Length=464 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 73/119 (62%), Positives = 97/119 (82%), Gaps = 2/119 (1%) Query 186 PVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLN 245 P+RA++QIRRIDPWSTLK++ ++SV+LFFVWM+ V LY+VL GMGVW +LN+ D++ Sbjct 348 PLRATVQIRRIDPWSTLKITSVISVSLFFVWMVAVGLLYVVLDGMGVWDRLNNAFTDIV- 406 Query 246 NASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 A G S LV++G +FG A LIG+ N+VL TAL TIG+F+YNL +DL+GG+EVTLADRD Sbjct 407 -ADGGSDGLVTAGQVFGYAALIGIANMVLFTALVTIGSFIYNLCSDLVGGVEVTLADRD 464 >gi|134096628|ref|YP_001102289.1| hypothetical protein SACE_0010 [Saccharopolyspora erythraea NRRL 2338] gi|291005718|ref|ZP_06563691.1| hypothetical protein SeryN2_14454 [Saccharopolyspora erythraea NRRL 2338] gi|133909251|emb|CAL99363.1| hypothetical protein Rv0007 [Saccharopolyspora erythraea NRRL 2338] Length=271 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 84/164 (52%), Positives = 112/164 (69%), Gaps = 4/164 (2%) Query 145 RPAEGGAGSRGDSAAGSSGGRSITAESRDARVQL---SARR-SRGPVRASMQIRRIDPWS 200 RPA+ +R + SSGGR+ R SARR SRGP RAS+Q++R+DPWS Sbjct 108 RPAQEQETARNEVPQSSSGGRTAVTFGSAGRATTAAGSARRPSRGPRRASLQVKRVDPWS 167 Query 201 TLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTI 260 LK++L+LSVALFFVWMI VA LY VL GMGVW +LN +L ++ L+S+G + Sbjct 168 VLKLALVLSVALFFVWMIAVAVLYGVLDGMGVWDQLNGTFTELTQPDDAAAEPLISAGRV 227 Query 261 FGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 FG A +IG +NIVL+TALAT+ AF+YN+ D GG+EVTL++R+ Sbjct 228 FGVASIIGAINIVLITALATVAAFIYNVAADFAGGVEVTLSERE 271 >gi|226303500|ref|YP_002763458.1| hypothetical protein RER_00110 [Rhodococcus erythropolis PR4] gi|226182615|dbj|BAH30719.1| hypothetical protein RER_00110 [Rhodococcus erythropolis PR4] Length=377 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 73/119 (62%), Positives = 97/119 (82%), Gaps = 2/119 (1%) Query 186 PVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLN 245 P+RA++QIRRIDPWSTLK++ ++SV+LFFVWM+ V LY+VL GMGVW +LN+ D++ Sbjct 261 PLRATVQIRRIDPWSTLKITSVISVSLFFVWMVAVGLLYVVLDGMGVWDRLNNAFTDIV- 319 Query 246 NASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 A G S LV++G +FG A LIG+ N+VL TAL TIG+F+YNL +DL+GG+EVTLADRD Sbjct 320 -ADGGSDGLVTAGQVFGYAALIGIANMVLFTALVTIGSFIYNLCSDLVGGVEVTLADRD 377 >gi|226362910|ref|YP_002780690.1| hypothetical protein ROP_34980 [Rhodococcus opacus B4] gi|226241397|dbj|BAH51745.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=359 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 73/118 (62%), Positives = 97/118 (83%), Gaps = 2/118 (1%) Query 187 VRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNN 246 +RA++Q+R+IDPWSTLK+S ++SV+LFFVWM+ V LY+VL GMGVW +LN+ D++ Sbjct 244 LRATVQVRKIDPWSTLKISSVISVSLFFVWMVAVGLLYVVLDGMGVWDRLNNAFTDIV-- 301 Query 247 ASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 A SS LV++G +FG A +IGL N+VL TALATIGAF+YNL +DL+GG+EVTLADRD Sbjct 302 AESSSDGLVTAGQVFGYAAVIGLANMVLFTALATIGAFIYNLCSDLVGGVEVTLADRD 359 >gi|54021972|ref|YP_116214.1| hypothetical protein nfa80 [Nocardia farcinica IFM 10152] gi|54013480|dbj|BAD54850.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=389 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 74/119 (63%), Positives = 97/119 (82%), Gaps = 1/119 (0%) Query 186 PVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLN 245 P+RA++QIRRIDPWSTLK+SL++SVALFFVWM+ V LY+VL GMGVW +LN+ D+++ Sbjct 272 PLRATVQIRRIDPWSTLKISLVISVALFFVWMLAVGLLYIVLEGMGVWERLNNTFTDMVS 331 Query 246 NASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 SG SA L+ +GT+FG A +IGL+N+VL TAL T+G F+YN DL+GGI+VTLAD D Sbjct 332 QDSG-SAGLIDAGTVFGYAGVIGLINVVLFTALGTVGTFIYNQCCDLVGGIQVTLADPD 389 >gi|312137525|ref|YP_004004861.1| integral membrane protein [Rhodococcus equi 103S] gi|311886864|emb|CBH46172.1| putative integral membrane protein [Rhodococcus equi 103S] Length=189 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 88/182 (49%), Positives = 117/182 (65%), Gaps = 31/182 (17%) Query 123 ASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARR 182 A ++PDLS PR RPA G A +AA + G Sbjct 39 AKDMPDLSA-VPRQ--------RPASGSARKAALTAAVTEDGE----------------- 72 Query 183 SRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGD 242 P+RA++Q+RRIDPWSTLKVSL++SVALFFVWM+ V LYLVL GMGVW +LN+ + Sbjct 73 ---PLRATVQLRRIDPWSTLKVSLVISVALFFVWMVAVGLLYLVLDGMGVWDRLNNAFTE 129 Query 243 LLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLAD 302 ++SG LV+SG +FG + L+G++N+VL TALATIG+F+YNL +DL+GG++VTLAD Sbjct 130 FTTDSSGGG--LVTSGQVFGYSALVGVMNVVLFTALATIGSFIYNLCSDLVGGVQVTLAD 187 Query 303 RD 304 D Sbjct 188 PD 189 >gi|296137761|ref|YP_003645004.1| hypothetical protein Tpau_0011 [Tsukamurella paurometabola DSM 20162] gi|296025895|gb|ADG76665.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=232 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 70/127 (56%), Positives = 100/127 (79%), Gaps = 2/127 (1%) Query 178 LSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLN 237 + + + GPVRA+MQ+R IDPW+T K++ ++SV LFFVWMI V LY++L GMGVW+K+N Sbjct 108 VKTQAATGPVRAAMQLRSIDPWTTFKLAGVVSVVLFFVWMIAVGALYVILNGMGVWSKIN 167 Query 238 SNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIE 297 + L+N +GSS ++++G +F + L+GL N+VL+TALAT+GAF+YNL DL+GG+E Sbjct 168 DSFQTLVNEQAGSS--ILTAGDVFLYSGLVGLANVVLLTALATVGAFIYNLCADLVGGVE 225 Query 298 VTLADRD 304 VTLADRD Sbjct 226 VTLADRD 232 >gi|256374168|ref|YP_003097828.1| hypothetical protein Amir_0008 [Actinosynnema mirum DSM 43827] gi|255918471|gb|ACU33982.1| hypothetical protein Amir_0008 [Actinosynnema mirum DSM 43827] Length=288 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 66/115 (58%), Positives = 90/115 (79%), Gaps = 0/115 (0%) Query 190 SMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASG 249 S+Q++R+DPWS LK++L+LSVALFFVW++ V LY VL GMGVW K+N+ DLL + Sbjct 174 SLQVKRVDPWSVLKLALVLSVALFFVWLVAVGVLYGVLNGMGVWDKINNTANDLLQSEEA 233 Query 250 SSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 S L+S+G +FG + ++G VNIVL TALAT+GAFVYN+ DL GG+EVTL++R+ Sbjct 234 SGDPLISAGRVFGVSAIVGAVNIVLFTALATVGAFVYNVSADLAGGLEVTLSERE 288 >gi|326383916|ref|ZP_08205600.1| hypothetical protein SCNU_13323 [Gordonia neofelifaecis NRRL B-59395] gi|326197375|gb|EGD54565.1| hypothetical protein SCNU_13323 [Gordonia neofelifaecis NRRL B-59395] Length=288 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/137 (50%), Positives = 100/137 (73%), Gaps = 1/137 (0%) Query 169 AESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLG 228 A +R + + AR P+RA++QIRR+DPWS KVS +LSVA FF+WMI VA LY ++G Sbjct 152 ALARASSQTIPARSVGTPLRAAVQIRRVDPWSVFKVSGVLSVAGFFIWMIAVAILYGIMG 211 Query 229 GMGVWAKLNSNVGDLL-NNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYN 287 GMG+W ++NS+ G L+ ++ S S +L+S G +F + L G+V +L+TAL+TI A++YN Sbjct 212 GMGIWDQINSSFGTLVSSDGSTSGQDLISGGQVFMFSALFGIVAAILLTALSTISAYIYN 271 Query 288 LITDLIGGIEVTLADRD 304 + D++GG+EVTLAD D Sbjct 272 VCADMVGGVEVTLADLD 288 >gi|284988641|ref|YP_003407195.1| hypothetical protein Gobs_0012 [Geodermatophilus obscurus DSM 43160] gi|284061886|gb|ADB72824.1| conserved hypothetical protein [Geodermatophilus obscurus DSM 43160] Length=237 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/127 (52%), Positives = 93/127 (74%), Gaps = 1/127 (0%) Query 179 SARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNS 238 S + RGP RA +Q+R ID +S LK+SL+LS+A+FF+WM+ V LY VL G+GV+ LN Sbjct 111 SGKAPRGPRRARLQLRHIDTFSALKISLVLSIAMFFIWMVAVGVLYGVLSGLGVFETLND 170 Query 239 NVGDL-LNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIE 297 G L + +E+++ G +FGGA +IG +NIVLMTAL T+ AF+YN+ +DL+GG+E Sbjct 171 LFGQLGSASGGDGGSEVITPGIVFGGAAVIGAINIVLMTALCTVAAFIYNMCSDLVGGLE 230 Query 298 VTLADRD 304 VTL++RD Sbjct 231 VTLSERD 237 >gi|331693906|ref|YP_004330145.1| hypothetical protein Psed_0007 [Pseudonocardia dioxanivorans CB1190] gi|326948595|gb|AEA22292.1| hypothetical protein Psed_0007 [Pseudonocardia dioxanivorans CB1190] Length=367 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 64/125 (52%), Positives = 94/125 (76%), Gaps = 3/125 (2%) Query 182 RSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVG 241 R R P +A++Q++R+DPWS LK++L+L+V +FF+WM+ + LY VL GMGVW +LN Sbjct 244 RPRRPRQAALQLKRLDPWSVLKLALVLAVVIFFIWMVAIGVLYGVLDGMGVWDRLNGTYN 303 Query 242 DLLN--NASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVT 299 DL++ +ASG SA L+S+G +FG A ++G +N +L TIGAFVYN+ DL+GG+EVT Sbjct 304 DLVSGESASGGSA-LISAGRVFGLAAVVGAINSLLFAVAMTIGAFVYNVSADLVGGVEVT 362 Query 300 LADRD 304 L++RD Sbjct 363 LSERD 367 >gi|330464885|ref|YP_004402628.1| hypothetical protein VAB18032_04510 [Verrucosispora maris AB-18-032] gi|328807856|gb|AEB42028.1| hypothetical protein VAB18032_04510 [Verrucosispora maris AB-18-032] Length=301 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 75/163 (47%), Positives = 103/163 (64%), Gaps = 5/163 (3%) Query 145 RPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKV 204 RPA GG G A R + R AR +S+ SRGP RA + ++RIDPWS +K Sbjct 141 RPANGGGLPPGVGTAAVGAAR-VGEAVRAARTSVSSAASRGPRRARLNLKRIDPWSVMKF 199 Query 205 SLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASG---SSAELVSSGTIF 261 + +SV LF V ++ + LYL L MGV+ +N ++ DL+N G S ++ ++G IF Sbjct 200 AFAVSVVLFIVIVVATSVLYLALDAMGVFTSVNDSLSDLVNAGGGQGTSGFQITATGVIF 259 Query 262 GGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 + LIG VN+VL TALAT+GAFVYN+ DL+GGIE+TLA+RD Sbjct 260 -TSMLIGAVNVVLFTALATLGAFVYNVCADLVGGIELTLAERD 301 >gi|262200053|ref|YP_003271261.1| hypothetical protein Gbro_0007 [Gordonia bronchialis DSM 43247] gi|262083400|gb|ACY19368.1| hypothetical protein Gbro_0007 [Gordonia bronchialis DSM 43247] Length=316 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 66/126 (53%), Positives = 94/126 (75%), Gaps = 4/126 (3%) Query 182 RSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVG 241 R+ P+RA++QIRRIDPW+T K++ +L+V F +WMI +A LYLVL GMGV ++N++ Sbjct 192 RANTPLRAAIQIRRIDPWATFKITAVLAVIGFIIWMIAIAVLYLVLDGMGVREQVNTSFA 251 Query 242 DLLNNASGSSAE---LVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEV 298 + A GSSA+ + S+ T+FG A L+G +N +L+TALATIG+++YN+ DLIGG EV Sbjct 252 -TVATADGSSAQSDDIFSATTVFGAAALLGAINAILITALATIGSYIYNICADLIGGAEV 310 Query 299 TLADRD 304 TLAD D Sbjct 311 TLADLD 316 >gi|333917687|ref|YP_004491268.1| hypothetical protein AS9A_0008 [Amycolicicoccus subflavus DQS3-9A1] gi|333479908|gb|AEF38468.1| hypothetical protein AS9A_0008 [Amycolicicoccus subflavus DQS3-9A1] Length=127 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 67/127 (53%), Positives = 95/127 (75%), Gaps = 2/127 (1%) Query 178 LSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLN 237 ++A+ ++ +RAS+QIR IDPWSTLK+S ++S ALF VWMI V LYLVL M VW +LN Sbjct 3 VTAKPTQAGLRASVQIREIDPWSTLKISAIISAALFLVWMIAVGTLYLVLEFMNVWDRLN 62 Query 238 SNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIE 297 S ++++ G++ E++S+ IFG IG +N++L TAL T+ +F+YNL +DL+GGIE Sbjct 63 SAFLEIVDE--GAAGEIISASQIFGWTAAIGFINMILFTALLTLASFIYNLASDLVGGIE 120 Query 298 VTLADRD 304 VTLADRD Sbjct 121 VTLADRD 127 >gi|300781945|ref|YP_003762236.1| hypothetical protein AMED_0008 [Amycolatopsis mediterranei U32] gi|299791459|gb|ADJ41834.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340523298|gb|AEK38503.1| hypothetical protein RAM_00040 [Amycolatopsis mediterranei S699] Length=221 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 63/118 (54%), Positives = 89/118 (76%), Gaps = 2/118 (1%) Query 189 ASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLL--NN 246 AS+Q++R DPWS LK+SL+L VA+FFVW++ V LY VL GMGVW KLN L+ Sbjct 104 ASLQVKRFDPWSVLKLSLVLGVAMFFVWLVAVGVLYTVLDGMGVWDKLNGTYSSLVGGEG 163 Query 247 ASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 A+ S+ L+S+G +FG A ++G +NIVL++ALAT+ AF+YN+ DL GG+EVTL++R+ Sbjct 164 ANASAEPLISAGRVFGIAAILGAINIVLVSALATVSAFIYNVSADLAGGLEVTLSERE 221 >gi|296392548|ref|YP_003657432.1| hypothetical protein Srot_0110 [Segniliparus rotundus DSM 44985] gi|296179695|gb|ADG96601.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=199 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 62/123 (51%), Positives = 90/123 (74%), Gaps = 0/123 (0%) Query 180 ARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSN 239 +++ GP+RA +Q+R IDPW+ LKV+ + V LF WMI VA LY +L +GV K+NS Sbjct 75 SQQPSGPLRAQVQVRWIDPWTVLKVTAAVMVVLFVAWMIGVAVLYALLEAIGVMGKINSG 134 Query 240 VGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVT 299 +GD A+ ++V+ G +FG + L+G+VNIVL+TALAT+GAF++NL DL+GG+E+T Sbjct 135 LGDFSTAAADQGGDIVTPGMVFGFSALVGIVNIVLVTALATVGAFIFNLCVDLVGGVEIT 194 Query 300 LAD 302 LAD Sbjct 195 LAD 197 >gi|343928741|ref|ZP_08768186.1| hypothetical protein GOALK_120_01680 [Gordonia alkanivorans NBRC 16433] gi|343761490|dbj|GAA15112.1| hypothetical protein GOALK_120_01680 [Gordonia alkanivorans NBRC 16433] Length=305 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 100/298 (34%), Positives = 145/298 (49%), Gaps = 62/298 (20%) Query 44 PPWQRAATRQS------QAGHRQ---------------------PPPVSH----PEGRPT 72 PPWQR +S +A R+ PPP S P G T Sbjct 33 PPWQRGPVEESSGSAPTEAFGREDDSRPNAQDNPGGLPPESRGGPPPESRGGPPPRGIVT 92 Query 73 NPPAAADARLNRFISGASAPVTG------PAAAVRTPQPDPDASLGCGDGSPAEAYASEL 126 N AA + +SG APVT P +AV T +P G + + L Sbjct 93 NSGTAAAS-----MSGQQAPVTKLDSPRRPGSAVATEEP------GFVESPTSTIDRENL 141 Query 127 PDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGP 186 P P RP E + A S R + A S Sbjct 142 PGHDLPDLDQIHHTADLKRPPEAPPAAAPSKVAPRSAPRQVGAGSA-------------- 187 Query 187 VRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNN 246 +RA++Q+RRIDPW+T K++ +LS FF+WMI VA LYL+ GMG+W ++N++ G L+ + Sbjct 188 LRAAVQLRRIDPWATFKIAAVLSFVGFFIWMIAVAVLYLIFDGMGIWDQVNNSFGTLVAD 247 Query 247 ASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 S ++ +++ +GT+FG A L+G VN +L+TA+AT+G+++YN+ DL+GG EVTLAD D Sbjct 248 ESSTAGDVIGAGTVFGVAALLGAVNAILLTAIATVGSYIYNICADLVGGAEVTLADLD 305 >gi|302531363|ref|ZP_07283705.1| predicted protein [Streptomyces sp. AA4] gi|302440258|gb|EFL12074.1| predicted protein [Streptomyces sp. AA4] Length=218 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/118 (54%), Positives = 88/118 (75%), Gaps = 2/118 (1%) Query 189 ASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLL--NN 246 AS+QI+R DPWS LK++L+L VA+FFVW++ V LY VL GMGVW KLN L+ Sbjct 101 ASLQIKRFDPWSVLKLALVLGVAMFFVWLVAVGVLYTVLDGMGVWDKLNGTYSSLVGGEG 160 Query 247 ASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 A+ S L+S+G +FG A ++G +NIVL++ALAT+ AF+YN+ DL GG+EVTL++R+ Sbjct 161 ANASPDPLISAGRVFGIAAILGAINIVLVSALATVSAFIYNVSADLAGGLEVTLSERE 218 >gi|159035683|ref|YP_001534936.1| hypothetical protein Sare_0009 [Salinispora arenicola CNS-205] gi|157914518|gb|ABV95945.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=302 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/136 (52%), Positives = 95/136 (70%), Gaps = 4/136 (2%) Query 172 RDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMG 231 R AR +S+ SRGP RA + +RRIDPWS +K + +SV LF V ++ + LYL L MG Sbjct 168 RAARTAVSSAASRGPRRARLNLRRIDPWSVMKFAFAVSVVLFIVVVVATSVLYLALDAMG 227 Query 232 VWAKLNSNVGDLLNNASGSSA---ELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNL 288 V+A +N ++ DL+N G SA ++ + G I A LIGLVN+VL TALAT+GAFVYN+ Sbjct 228 VFASVNDSLSDLVNAGGGQSADGFQITARGVILSSA-LIGLVNVVLFTALATLGAFVYNV 286 Query 289 ITDLIGGIEVTLADRD 304 DL+GG+E+TLA+RD Sbjct 287 CADLVGGVELTLAERD 302 >gi|257054097|ref|YP_003131929.1| hypothetical protein Svir_00080 [Saccharomonospora viridis DSM 43017] gi|256583969|gb|ACU95102.1| hypothetical protein Svir_00080 [Saccharomonospora viridis DSM 43017] Length=248 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 92/264 (35%), Positives = 133/264 (51%), Gaps = 35/264 (13%) Query 41 GDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAV 100 G+ PPWQR A + AG ++ A L +S ++ V A Sbjct 20 GEVPPWQRVA-KDGSAG-------------TSDGDEGATQWLTSPVSAGASTVPPAPGAG 65 Query 101 RTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAG 160 P G G A A+ L + Q A+P AG G Sbjct 66 GGGAQPPQQPGGEGSAFGQGAVANRL------FGQGEQSATRTAQPQGSDAGKSG----- 114 Query 161 SSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITV 220 SG +S++A R R A ++Q+RR+DPWS LK+SL+L VALFF+W++ V Sbjct 115 -SGTQSLSAFRRPGRGPRRA---------NLQVRRVDPWSVLKLSLVLGVALFFIWLVAV 164 Query 221 AFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALAT 280 LY VL GMGVW +N L+ N + L+++GT+FG A ++G VNIVL++ALAT Sbjct 165 GVLYTVLDGMGVWDSINGTYDSLVANDAVDGDVLITAGTVFGAAAIVGAVNIVLISALAT 224 Query 281 IGAFVYNLITDLIGGIEVTLADRD 304 +GAF+YN+ L GG+E+TL++R+ Sbjct 225 VGAFIYNVSAGLSGGLELTLSERE 248 >gi|324999889|ref|ZP_08121001.1| hypothetical protein PseP1_14021 [Pseudonocardia sp. P1] Length=171 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/123 (50%), Positives = 85/123 (70%), Gaps = 0/123 (0%) Query 182 RSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVG 241 R+R P +A +Q++R+DPWS LK++L L+V L+ VWM+ LY VLGGMGVW +LN Sbjct 49 RNRPPRQALLQLKRLDPWSVLKMALALAVVLWLVWMVAAGVLYGVLGGMGVWDRLNGTYA 108 Query 242 DLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLA 301 DL+ + L+S+G +FG A ++G VN +L TI AFVYN+ DL+GGIEVTL+ Sbjct 109 DLVTAQPETGGALISAGRVFGLAAVVGAVNSLLFAVAITIVAFVYNVAADLVGGIEVTLS 168 Query 302 DRD 304 +RD Sbjct 169 ERD 171 >gi|145592576|ref|YP_001156873.1| hypothetical protein Strop_0010 [Salinispora tropica CNB-440] gi|145301913|gb|ABP52495.1| hypothetical protein Strop_0010 [Salinispora tropica CNB-440] Length=308 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 79/171 (47%), Positives = 109/171 (64%), Gaps = 6/171 (3%) Query 137 PQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRI 196 PQ N A RP +GG+ G S + G + R AR +S+ SRGP RA + +RRI Sbjct 141 PQPNSA-GRP-QGGSLPPGISGVAAVGAARVGEAVRAARTAVSSAASRGPRRARLNLRRI 198 Query 197 DPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSA---E 253 DPWS +K + +SV LF V ++ + LYL L MGV+A +N ++ DL+N G + + Sbjct 199 DPWSVMKFAFAVSVVLFIVVVVATSVLYLALDAMGVFASVNDSLSDLVNAGGGQNTNGFQ 258 Query 254 LVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD 304 + + G I A LIGLVN+VL TALAT+GAFVYN+ DL+GG+E+TLA+RD Sbjct 259 ITARGVILSSA-LIGLVNVVLFTALATLGAFVYNVCADLVGGVELTLAERD 308 Lambda K H 0.315 0.133 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 511987440690 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40