BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0009
Length=182
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-... 373 6e-102
gi|308232618|ref|ZP_07416636.2| iron-regulated peptidyl-prolyl-c... 372 9e-102
gi|56554361|pdb|1W74|A Chain A, X-Ray Structure Of Peptidyl-Prol... 370 4e-101
gi|308406293|ref|ZP_07495851.2| iron-regulated peptidyl-prolyl-c... 357 4e-97
gi|240172109|ref|ZP_04750768.1| putative iron-regulated peptidyl... 322 2e-86
gi|254773063|ref|ZP_05214579.1| PpiA [Mycobacterium avium subsp.... 319 1e-85
gi|183980046|ref|YP_001848337.1| peptidyl-prolyl cis-trans isome... 318 2e-85
gi|342860270|ref|ZP_08716922.1| iron-regulated peptidyl-prolyl c... 318 3e-85
gi|41406109|ref|NP_958945.1| PpiA [Mycobacterium avium subsp. pa... 317 4e-85
gi|118615930|ref|YP_904262.1| peptidyl-prolyl cis-trans isomeras... 317 7e-85
gi|145221411|ref|YP_001132089.1| peptidylprolyl isomerase [Mycob... 316 9e-85
gi|15826875|ref|NP_301138.1| peptidyl-prolyl cis-trans isomerase... 316 1e-84
gi|336462086|gb|EGO40928.1| peptidyl-prolyl cis-trans isomerase ... 315 1e-84
gi|296167122|ref|ZP_06849531.1| peptidyl-prolyl cis-trans isomer... 315 1e-84
gi|120401045|ref|YP_950874.1| peptidylprolyl isomerase [Mycobact... 315 2e-84
gi|254821351|ref|ZP_05226352.1| PpiA [Mycobacterium intracellula... 312 1e-83
gi|118464521|ref|YP_879314.1| peptidyl-prolyl cis-trans isomeras... 308 3e-82
gi|108796991|ref|YP_637188.1| peptidylprolyl isomerase [Mycobact... 298 2e-79
gi|118468422|ref|YP_884444.1| peptidyl-prolyl cis-trans isomeras... 298 3e-79
gi|333988650|ref|YP_004521264.1| iron-regulated peptidyl-prolyl ... 289 1e-76
gi|169627132|ref|YP_001700781.1| peptidyl-prolyl cis-trans isome... 277 6e-73
gi|312137530|ref|YP_004004866.1| peptidyl prolyl isomerase [Rhod... 275 3e-72
gi|325677504|ref|ZP_08157168.1| peptidyl-prolyl cis-trans isomer... 274 4e-72
gi|226362917|ref|YP_002780697.1| peptidyl-prolyl cis-trans isome... 273 7e-72
gi|111020677|ref|YP_703649.1| peptidylprolyl isomerase [Rhodococ... 271 2e-71
gi|333917704|ref|YP_004491285.1| peptidyl-prolyl cis-trans isome... 268 2e-70
gi|226303506|ref|YP_002763464.1| peptidyl-prolyl cis-trans isome... 259 9e-68
gi|229491153|ref|ZP_04384981.1| peptidyl-prolyl cis-trans isomer... 259 2e-67
gi|317506059|ref|ZP_07963887.1| cyclophilin type peptidyl-prolyl... 257 5e-67
gi|326383927|ref|ZP_08205611.1| peptidyl-prolyl cis-trans isomer... 257 6e-67
gi|21322798|dbj|BAB97427.1| Peptidyl-prolyl cis-trans isomerase ... 256 1e-66
gi|145294090|ref|YP_001136911.1| hypothetical protein cgR_0048 [... 256 1e-66
gi|19551284|ref|NP_599286.1| peptidyl-prolyl cis-trans isomerase... 256 1e-66
gi|62388929|ref|YP_224331.1| peptidyl-prolyl cis-trans isomerase... 255 2e-66
gi|68535095|ref|YP_249800.1| peptidyl-prolyl cis-trans isomerase... 255 2e-66
gi|38232667|ref|NP_938434.1| peptidyl-prolyl cis-trans isomerase... 254 5e-66
gi|296394647|ref|YP_003659531.1| peptidylprolyl isomerase [Segni... 254 5e-66
gi|337289637|ref|YP_004628658.1| peptidyl-prolyl cis-trans isome... 253 1e-65
gi|237784672|ref|YP_002905377.1| peptidyl-prolyl cis-trans isome... 252 1e-65
gi|343928756|ref|ZP_08768201.1| putative peptidyl-prolyl cis-tra... 252 1e-65
gi|334695762|gb|AEG80559.1| peptidyl-prolyl cis-trans isomerase ... 252 2e-65
gi|262200064|ref|YP_003271272.1| peptidylprolyl isomerase [Gordo... 251 2e-65
gi|300857435|ref|YP_003782418.1| peptidyl-prolyl cis-trans isome... 250 5e-65
gi|172039730|ref|YP_001799444.1| peptidyl-prolyl cis-trans isome... 250 8e-65
gi|25026585|ref|NP_736639.1| putative peptidylprolyl isomerase [... 248 2e-64
gi|336324597|ref|YP_004604563.1| peptidyl-prolyl cis-trans isome... 248 2e-64
gi|331694000|ref|YP_004330239.1| peptidylprolyl isomerase [Pseud... 248 4e-64
gi|259508280|ref|ZP_05751180.1| peptidyl-prolyl cis-trans isomer... 247 4e-64
gi|255325721|ref|ZP_05366817.1| peptidyl-prolyl cis-trans isomer... 246 7e-64
gi|324997632|ref|ZP_08118744.1| peptidyl-prolyl cis-trans isomer... 246 9e-64
>gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-trans isomerase A [Mycobacterium
tuberculosis H37Rv]
gi|15839382|ref|NP_334419.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium tuberculosis
CDC1551]
gi|31791186|ref|NP_853679.1| iron-regulated peptidyl-prolyl cis-trans isomerase A [Mycobacterium
bovis AF2122/97]
63 more sequence titles
Length=182
Score = 373 bits (957), Expect = 6e-102, Method: Compositional matrix adjust.
Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG
Sbjct 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT
Sbjct 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|308232618|ref|ZP_07416636.2| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis SUMu001]
gi|308369283|ref|ZP_07417167.2| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis SUMu002]
gi|308370293|ref|ZP_07420940.2| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis SUMu003]
13 more sequence titles
Length=189
Score = 372 bits (956), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG
Sbjct 8 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 67
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 68 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 127
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT
Sbjct 128 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 187
Query 181 IS 182
IS
Sbjct 188 IS 189
>gi|56554361|pdb|1W74|A Chain A, X-Ray Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
A, Ppia, Rv0009, From Mycobacterium Tuberculosis.
gi|56554362|pdb|1W74|B Chain B, X-Ray Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
A, Ppia, Rv0009, From Mycobacterium Tuberculosis.
Length=191
Score = 370 bits (950), Expect = 4e-101, Method: Compositional matrix adjust.
Identities = 181/181 (100%), Positives = 181/181 (100%), Gaps = 0/181 (0%)
Query 2 ADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGP 61
ADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGP
Sbjct 11 ADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGP 70
Query 62 SGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPG 121
SGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPG
Sbjct 71 SGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPG 130
Query 122 TNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 181
TNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI
Sbjct 131 TNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 190
Query 182 S 182
S
Sbjct 191 S 191
>gi|308406293|ref|ZP_07495851.2| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis SUMu012]
gi|308363885|gb|EFP52736.1| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis SUMu012]
gi|323717348|gb|EGB26553.1| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis CDC1551A]
gi|339293089|gb|AEJ45200.1| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis CCDC5079]
gi|339296738|gb|AEJ48848.1| iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA [Mycobacterium
tuberculosis CCDC5180]
Length=176
Score = 357 bits (916), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/176 (99%), Positives = 176/176 (100%), Gaps = 0/176 (0%)
Query 7 VTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY 66
+TNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY
Sbjct 1 MTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY 60
Query 67 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 126
DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ
Sbjct 61 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 120
Query 127 FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
Sbjct 121 FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 176
>gi|240172109|ref|ZP_04750768.1| putative iron-regulated peptidyl-prolyl cis-trans isomerase A
[Mycobacterium kansasii ATCC 12478]
Length=182
Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/182 (93%), Positives = 172/182 (95%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MA CD VTNSP TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTKDYSTQNASGG
Sbjct 1 MAHCDPVTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI GFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 61 TSGPFYDGAVFHRVINGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITVGKTPHLNRRHTIFGEV D ESQRVV+AI+ T TDGNDRPTDPVVIESIT
Sbjct 121 GTNGSQFFITVGKTPHLNRRHTIFGEVTDPESQRVVDAIATTPTDGNDRPTDPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|254773063|ref|ZP_05214579.1| PpiA [Mycobacterium avium subsp. avium ATCC 25291]
Length=182
Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/182 (91%), Positives = 175/182 (97%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MAD D+VTNSP TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASGG
Sbjct 1 MADSDAVTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGG 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFD+PYLLAMANAGP
Sbjct 61 SSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDRPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITV KTPHLNRRHTIFGEV+D ESQ+VV+AIS T+TDGNDRP++PVVIESIT
Sbjct 121 GTNGSQFFITVDKTPHLNRRHTIFGEVVDPESQKVVDAISTTSTDGNDRPSEPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|183980046|ref|YP_001848337.1| peptidyl-prolyl cis-trans isomerase A, PpiA [Mycobacterium marinum
M]
gi|183173372|gb|ACC38482.1| peptidyl-prolyl cis-trans isomerase A, PpiA [Mycobacterium marinum
M]
Length=182
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/182 (91%), Positives = 174/182 (96%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MADCDSVTNSP+ TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASG
Sbjct 1 MADCDSVTNSPIQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGS 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 61 TSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITVG TPHLNRRHTIFGEV D +SQRVVE I+ T+TDG+DRPT+PVVIESIT
Sbjct 121 GTNGSQFFITVGPTPHLNRRHTIFGEVSDPDSQRVVETIATTSTDGSDRPTEPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|342860270|ref|ZP_08716922.1| iron-regulated peptidyl-prolyl cis-trans isomerase A [Mycobacterium
colombiense CECT 3035]
gi|342132648|gb|EGT85877.1| iron-regulated peptidyl-prolyl cis-trans isomerase A [Mycobacterium
colombiense CECT 3035]
Length=182
Score = 318 bits (814), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/182 (91%), Positives = 174/182 (96%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MAD +VTNSP TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASGG
Sbjct 1 MADSLAVTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGG 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 61 SSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITVG+TPHLNRRHTIFGEV D ESQ+VV+AIS T+TDGNDRPT+PVVIESIT
Sbjct 121 GTNGSQFFITVGQTPHLNRRHTIFGEVTDPESQKVVDAISTTSTDGNDRPTEPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|41406109|ref|NP_958945.1| PpiA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394457|gb|AAS02328.1| PpiA [Mycobacterium avium subsp. paratuberculosis K-10]
Length=182
Score = 317 bits (812), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/182 (90%), Positives = 174/182 (96%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MAD D+VTNSP TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASGG
Sbjct 1 MADSDAVTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGG 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFD+PYLLAMANAGP
Sbjct 61 SSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDRPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQF ITV KTPHLNRRHTIFGEV+D ESQ+VV+AIS T+TDGNDRP++PVVIESIT
Sbjct 121 GTNGSQFLITVDKTPHLNRRHTIFGEVVDPESQKVVDAISTTSTDGNDRPSEPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|118615930|ref|YP_904262.1| peptidyl-prolyl cis-trans isomerase A, PpiA [Mycobacterium ulcerans
Agy99]
gi|118568040|gb|ABL02791.1| peptidyl-prolyl cis-trans isomerase A, PpiA [Mycobacterium ulcerans
Agy99]
Length=182
Score = 317 bits (811), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/182 (91%), Positives = 174/182 (96%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MADCDSVTNSP+ TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASG
Sbjct 1 MADCDSVTNSPIQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGS 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 61 TSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITVG TPHLNRRHTIFGEV D +SQ VVEAI+ T+TDG+DRPT+PVVIESIT
Sbjct 121 GTNGSQFFITVGPTPHLNRRHTIFGEVSDPDSQGVVEAIATTSTDGSDRPTEPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|145221411|ref|YP_001132089.1| peptidylprolyl isomerase [Mycobacterium gilvum PYR-GCK]
gi|315441709|ref|YP_004074588.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family [Mycobacterium sp. Spyr1]
gi|145213897|gb|ABP43301.1| Peptidylprolyl isomerase [Mycobacterium gilvum PYR-GCK]
gi|315260012|gb|ADT96753.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family [Mycobacterium sp. Spyr1]
Length=181
Score = 316 bits (810), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 154/182 (85%), Positives = 168/182 (93%), Gaps = 1/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MAD VT SP+ TATATLHTNRGDIKIALFGNHAPKTV+NFVGLAQGTK+YST+NASGG
Sbjct 1 MADLIPVT-SPIQTATATLHTNRGDIKIALFGNHAPKTVSNFVGLAQGTKEYSTENASGG 59
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDG +FHRVI+GFMIQGGDPTGTGRG GYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 60 SSGPFYDGVIFHRVIEGFMIQGGDPTGTGRGDAGYKFADEFHPELQFDKPYLLAMANAGP 119
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITV +TPHLNRRHTIFGEV+D ES++VV+AI+ TATD +DRP +PVVIESIT
Sbjct 120 GTNGSQFFITVTETPHLNRRHTIFGEVVDPESRKVVDAIATTATDRSDRPVEPVVIESIT 179
Query 181 IS 182
IS
Sbjct 180 IS 181
>gi|15826875|ref|NP_301138.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae TN]
gi|221229353|ref|YP_002502769.1| putative peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae
Br4923]
gi|17368733|sp|Q9CDE9.1|PPIA_MYCLE RecName: Full=Probable peptidyl-prolyl cis-trans isomerase A;
Short=PPIase A; AltName: Full=Rotamase A
gi|13092422|emb|CAC29519.1| putative peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae]
gi|219932460|emb|CAR70104.1| putative peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae
Br4923]
Length=182
Score = 316 bits (809), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/182 (91%), Positives = 173/182 (96%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MA CD VTNS + ATATLHTNRGDIK+ALFGNH PKTVANFVGLAQGTK+YSTQNASGG
Sbjct 1 MAHCDFVTNSLIQNATATLHTNRGDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGG 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITVG+TPHLNRRHTIFGEV D +SQ+VV+AIS TATDGNDRPT+PVVI+SIT
Sbjct 121 GTNGSQFFITVGETPHLNRRHTIFGEVTDPDSQKVVDAISTTATDGNDRPTEPVVIDSIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|336462086|gb|EGO40928.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family [Mycobacterium avium subsp. paratuberculosis S397]
Length=189
Score = 315 bits (808), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/182 (90%), Positives = 174/182 (96%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
+AD D+VTNSP TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASGG
Sbjct 8 VADSDAVTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGG 67
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFD+PYLLAMANAGP
Sbjct 68 SSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDRPYLLAMANAGP 127
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITV KTPHLNRRHTIFGEV+D ESQ+VV+AIS T+ DGNDRP++PVVIESIT
Sbjct 128 GTNGSQFFITVDKTPHLNRRHTIFGEVVDPESQKVVDAISTTSADGNDRPSEPVVIESIT 187
Query 181 IS 182
IS
Sbjct 188 IS 189
>gi|296167122|ref|ZP_06849531.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897526|gb|EFG77123.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=176
Score = 315 bits (808), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/176 (94%), Positives = 170/176 (97%), Gaps = 0/176 (0%)
Query 7 VTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY 66
+TNSP+ TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASGG SGPFY
Sbjct 1 MTNSPIQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGGSSGPFY 60
Query 67 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 126
DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ
Sbjct 61 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 120
Query 127 FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
FFITVGKTPHLNRRHTIFGEV D ESQ+VVEAIS TATD NDRPT+PVVIESITIS
Sbjct 121 FFITVGKTPHLNRRHTIFGEVTDPESQKVVEAISTTATDSNDRPTEPVVIESITIS 176
>gi|120401045|ref|YP_950874.1| peptidylprolyl isomerase [Mycobacterium vanbaalenii PYR-1]
gi|119953863|gb|ABM10868.1| Peptidylprolyl isomerase [Mycobacterium vanbaalenii PYR-1]
Length=187
Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/173 (88%), Positives = 164/173 (95%), Gaps = 0/173 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
SP+ TATATLHTNRGDIKIALFGNHAPKTV+NFVGLAQGTK+YST+NASGG SGPFYDG
Sbjct 15 SPIQTATATLHTNRGDIKIALFGNHAPKTVSNFVGLAQGTKEYSTENASGGSSGPFYDGV 74
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
+FHRVI+GFMIQGGDPTGTGRG GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI
Sbjct 75 IFHRVIEGFMIQGGDPTGTGRGDAGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 134
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TV +TPHLNRRHTIFGEV+D ES++VV+AI+ TATD +DRPTDPVVIESITIS
Sbjct 135 TVTETPHLNRRHTIFGEVVDPESRKVVDAIATTATDRSDRPTDPVVIESITIS 187
>gi|254821351|ref|ZP_05226352.1| PpiA [Mycobacterium intracellulare ATCC 13950]
Length=182
Score = 312 bits (799), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/182 (90%), Positives = 173/182 (96%), Gaps = 0/182 (0%)
Query 1 MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGG 60
MAD +VTNSP TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASGG
Sbjct 1 MADSHAVTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGG 60
Query 61 PSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
SGPFYDGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP
Sbjct 61 SSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGP 120
Query 121 GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESIT 180
GTNGSQFFITV KTPHLNRRHTIFGEV D +SQ+VV+AI+ T+TDGNDRP++PVVIESIT
Sbjct 121 GTNGSQFFITVDKTPHLNRRHTIFGEVTDPDSQQVVDAIATTSTDGNDRPSEPVVIESIT 180
Query 181 IS 182
IS
Sbjct 181 IS 182
>gi|118464521|ref|YP_879314.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium avium 104]
gi|118165808|gb|ABK66705.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium avium 104]
Length=176
Score = 308 bits (788), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/176 (91%), Positives = 170/176 (97%), Gaps = 0/176 (0%)
Query 7 VTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY 66
+TNSP TATATLHTNRGDIK+ALFGNHAPKTVANFVGLAQGTK+YSTQNASGG SGPFY
Sbjct 1 MTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVGLAQGTKEYSTQNASGGSSGPFY 60
Query 67 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 126
DGAVFHRVI+GFMIQGGDPTGTGRGGPGYKFADEFHPELQFD+PYLLAMANAGPGTNGSQ
Sbjct 61 DGAVFHRVIRGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDRPYLLAMANAGPGTNGSQ 120
Query 127 FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
FFITV KTPHLNRRHTIFGEV+D ESQ+VV+AIS T+TDGNDRP++PVVIESITIS
Sbjct 121 FFITVDKTPHLNRRHTIFGEVVDPESQKVVDAISTTSTDGNDRPSEPVVIESITIS 176
>gi|108796991|ref|YP_637188.1| peptidylprolyl isomerase [Mycobacterium sp. MCS]
gi|119866075|ref|YP_936027.1| peptidylprolyl isomerase [Mycobacterium sp. KMS]
gi|126432623|ref|YP_001068314.1| peptidylprolyl isomerase [Mycobacterium sp. JLS]
gi|108767410|gb|ABG06132.1| Peptidylprolyl isomerase [Mycobacterium sp. MCS]
gi|119692164|gb|ABL89237.1| Peptidylprolyl isomerase [Mycobacterium sp. KMS]
gi|126232423|gb|ABN95823.1| Peptidylprolyl isomerase [Mycobacterium sp. JLS]
Length=175
Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/173 (90%), Positives = 164/173 (95%), Gaps = 0/173 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
SP+ TATATLHTNRGDIKIALFGNHAPKTV+NFVGLAQGTKDY +NASG SGPFYDGA
Sbjct 3 SPIQTATATLHTNRGDIKIALFGNHAPKTVSNFVGLAQGTKDYKGENASGSTSGPFYDGA 62
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
VFHRVI GFMIQGGDPTGTGRGGPGY+FADEFHPELQFDKPYLLAMANAGPGTNGSQFFI
Sbjct 63 VFHRVIDGFMIQGGDPTGTGRGGPGYQFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 122
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TVGKTPHLNRRHTIFGEV+D ESQ+VV+AI+ TATD NDRPTDPVVIES+TIS
Sbjct 123 TVGKTPHLNRRHTIFGEVVDPESQKVVDAIATTATDRNDRPTDPVVIESVTIS 175
>gi|118468422|ref|YP_884444.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium smegmatis
str. MC2 155]
gi|118169709|gb|ABK70605.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium smegmatis
str. MC2 155]
Length=175
Score = 298 bits (762), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/173 (90%), Positives = 164/173 (95%), Gaps = 0/173 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
SP+ TATATLHTNRGDIKIALFGNHAPKTV NFVGLAQGTKDYST+NASGG SGPFYDGA
Sbjct 3 SPIQTATATLHTNRGDIKIALFGNHAPKTVNNFVGLAQGTKDYSTENASGGTSGPFYDGA 62
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
VFHRVI GFMIQGGDPTGTGRGGPGYKF DEFHPELQFDKPYLLAMANAGPGTNGSQFFI
Sbjct 63 VFHRVIDGFMIQGGDPTGTGRGGPGYKFEDEFHPELQFDKPYLLAMANAGPGTNGSQFFI 122
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TVGKTPHLNRRHTIFGEV+D ESQ+VV+AI+ T TD +DRPT+PVVIESITI+
Sbjct 123 TVGKTPHLNRRHTIFGEVVDEESQKVVDAIASTPTDRSDRPTEPVVIESITIA 175
>gi|333988650|ref|YP_004521264.1| iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA [Mycobacterium
sp. JDM601]
gi|333484618|gb|AEF34010.1| iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA [Mycobacterium
sp. JDM601]
Length=176
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/176 (86%), Positives = 165/176 (94%), Gaps = 0/176 (0%)
Query 7 VTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY 66
+T SP+ATATAT+HTNRGDIKIALFGNHAPKTVANFVGLAQGTK+YST NASGG SGPFY
Sbjct 1 MTTSPIATATATMHTNRGDIKIALFGNHAPKTVANFVGLAQGTKEYSTTNASGGSSGPFY 60
Query 67 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 126
DGAVFHRVI GFMIQGGDPTGTGRGGPGYKF DEFHPEL FDKPYLLAMANAGPGTNGSQ
Sbjct 61 DGAVFHRVIGGFMIQGGDPTGTGRGGPGYKFEDEFHPELVFDKPYLLAMANAGPGTNGSQ 120
Query 127 FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
FFITVG+TPHLNR+HTIFGEV+D +S+ VV+AI+ TATD DRPT+PVVIES+T+S
Sbjct 121 FFITVGQTPHLNRKHTIFGEVVDPDSRGVVDAIANTATDRGDRPTEPVVIESVTVS 176
>gi|169627132|ref|YP_001700781.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium abscessus
ATCC 19977]
gi|169239099|emb|CAM60127.1| Peptidyl-prolyl cis-trans isomerase [Mycobacterium abscessus]
Length=178
Score = 277 bits (708), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/173 (84%), Positives = 158/173 (92%), Gaps = 0/173 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
SP+ TATATLHTNRGD+ IALFGNHAPKTVANFVGLA G+K+YST+NA G +GPFYDGA
Sbjct 6 SPIQTATATLHTNRGDVVIALFGNHAPKTVANFVGLADGSKEYSTKNAKGEAAGPFYDGA 65
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
+FHRVI GFMIQGGDPTGTGRGGPGY+FADEFHPELQFDKPYLLAMANAGPGTNGSQFFI
Sbjct 66 IFHRVIDGFMIQGGDPTGTGRGGPGYQFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 125
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TVGKTPHLNRRHTIFGEV+D SQ+VV++I+ TA D DRPT+ VVI SITIS
Sbjct 126 TVGKTPHLNRRHTIFGEVVDPASQQVVDSIASTAVDRGDRPTEDVVINSITIS 178
>gi|312137530|ref|YP_004004866.1| peptidyl prolyl isomerase [Rhodococcus equi 103S]
gi|311886869|emb|CBH46177.1| putative peptidyl prolyl isomerase [Rhodococcus equi 103S]
Length=173
Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/169 (86%), Positives = 154/169 (92%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATATLHTNRGDIKIALFGNHAPKTV NFVGLA G+K+YSTQNA GG SGPFYDGAVFHR
Sbjct 5 TATATLHTNRGDIKIALFGNHAPKTVENFVGLADGSKEYSTQNAKGGASGPFYDGAVFHR 64
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTGRGGPGYKF DEFHPELQFD+ YLLAMANAGPGTNGSQFFITVG
Sbjct 65 VIDGFMIQGGDPTGTGRGGPGYKFGDEFHPELQFDRGYLLAMANAGPGTNGSQFFITVGP 124
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLNRRHTIFGEV+D ES++VV+AI+ TATD DRP D VVI SITI+
Sbjct 125 TPHLNRRHTIFGEVLDEESKKVVDAIATTATDRADRPVDDVVINSITIA 173
>gi|325677504|ref|ZP_08157168.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus equi ATCC 33707]
gi|325551751|gb|EGD21449.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus equi ATCC 33707]
Length=193
Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/169 (86%), Positives = 154/169 (92%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATATLHTNRGDIKIALFGNHAPKTV NFVGLA G+K+YSTQNA GG SGPFYDGAVFHR
Sbjct 25 TATATLHTNRGDIKIALFGNHAPKTVENFVGLADGSKEYSTQNAKGGASGPFYDGAVFHR 84
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTGRGGPGYKF DEFHPELQFD+ YLLAMANAGPGTNGSQFFITVG
Sbjct 85 VIDGFMIQGGDPTGTGRGGPGYKFGDEFHPELQFDRGYLLAMANAGPGTNGSQFFITVGP 144
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLNRRHTIFGEV+D ES++VV+AI+ TATD DRP D VVI SITI+
Sbjct 145 TPHLNRRHTIFGEVLDEESKKVVDAIATTATDRADRPVDDVVINSITIA 193
>gi|226362917|ref|YP_002780697.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus opacus B4]
gi|226241404|dbj|BAH51752.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus opacus B4]
Length=175
Score = 273 bits (698), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/173 (83%), Positives = 154/173 (90%), Gaps = 0/173 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
SP TATATLHTNRGDIKIALFGNHAPKTV NFVGLA G+KDYST NA G SGPFYDGA
Sbjct 3 SPHQTATATLHTNRGDIKIALFGNHAPKTVENFVGLADGSKDYSTANAGGTNSGPFYDGA 62
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
VFHRVI GFMIQGGDPTGTG GGPGYKF DEFHPELQFD+ Y+LAMANAGPGTNGSQFFI
Sbjct 63 VFHRVIDGFMIQGGDPTGTGAGGPGYKFGDEFHPELQFDRAYILAMANAGPGTNGSQFFI 122
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
T G TPHLNRRHTIFGEV+D ES++VV+AIS TATD +DRP +PVVI S+TI+
Sbjct 123 TTGPTPHLNRRHTIFGEVVDEESKKVVDAISTTATDRSDRPLEPVVINSVTIA 175
>gi|111020677|ref|YP_703649.1| peptidylprolyl isomerase [Rhodococcus jostii RHA1]
gi|110820207|gb|ABG95491.1| peptidylprolyl isomerase [Rhodococcus jostii RHA1]
Length=209
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/173 (83%), Positives = 153/173 (89%), Gaps = 0/173 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
SP TATATLHTNRGDIKIALFGNHAPKTV NFVGLA G+KDYST NA G SGPFYDGA
Sbjct 37 SPHQTATATLHTNRGDIKIALFGNHAPKTVENFVGLADGSKDYSTANAGGTDSGPFYDGA 96
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
+FHRVI GFMIQGGDPTGTG GGPGYKF DEFHPELQFD+ Y+LAMANAGPGTNGSQFFI
Sbjct 97 IFHRVIDGFMIQGGDPTGTGAGGPGYKFGDEFHPELQFDRAYILAMANAGPGTNGSQFFI 156
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
T G TPHLNRRHTIFGEV+D ES++VV+AIS TATD DRP +PVVI S+TI+
Sbjct 157 TTGPTPHLNRRHTIFGEVVDEESKKVVDAISTTATDRADRPLEPVVINSVTIA 209
>gi|333917704|ref|YP_004491285.1| peptidyl-prolyl cis-trans isomerase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333479925|gb|AEF38485.1| Peptidyl-prolyl cis-trans isomerase [Amycolicicoccus subflavus
DQS3-9A1]
Length=179
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/173 (81%), Positives = 153/173 (89%), Gaps = 0/173 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
SP TA ATLHTNRGDI I+LFGNHAPKTVANFVGLA G+ +Y T+NASG SGPFYDGA
Sbjct 6 SPHQTAVATLHTNRGDINISLFGNHAPKTVANFVGLADGSAEYKTENASGSKSGPFYDGA 65
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
VFHR+I GFMIQGGDPTGTGRGGPGY+F DEFHPELQFD+PYLLAMANAGPGTNGSQFFI
Sbjct 66 VFHRIIDGFMIQGGDPTGTGRGGPGYEFGDEFHPELQFDRPYLLAMANAGPGTNGSQFFI 125
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TV KTPHLN RHTIFGEV+DA+S+ VV+AI+ T TD DRP DPVVI SIT+S
Sbjct 126 TVTKTPHLNMRHTIFGEVVDADSRAVVDAIATTKTDRADRPVDPVVINSITLS 178
>gi|226303506|ref|YP_002763464.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus erythropolis
PR4]
gi|226182621|dbj|BAH30725.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus erythropolis
PR4]
Length=175
Score = 259 bits (663), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 138/169 (82%), Positives = 151/169 (90%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATATLHTNRGDIKIALFGNHAPKTV NFVGLA G+K+Y+T NA+G +GPFYDGA+FHR
Sbjct 7 TATATLHTNRGDIKIALFGNHAPKTVENFVGLADGSKEYTTANAAGTKTGPFYDGAIFHR 66
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTG GGPGYKF DEFHPELQFD+ YLLAMANAGPGTNGSQFFIT G
Sbjct 67 VIDGFMIQGGDPTGTGTGGPGYKFGDEFHPELQFDRSYLLAMANAGPGTNGSQFFITTGP 126
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLNRRHTIFGEV+D +S++VV+AIS TA D DRP +PVVI SITIS
Sbjct 127 TPHLNRRHTIFGEVLDDDSKKVVDAISSTAVDRGDRPVEPVVINSITIS 175
>gi|229491153|ref|ZP_04384981.1| peptidyl-prolyl cis-trans isomerase B [Rhodococcus erythropolis
SK121]
gi|229321891|gb|EEN87684.1| peptidyl-prolyl cis-trans isomerase B [Rhodococcus erythropolis
SK121]
Length=197
Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/169 (82%), Positives = 151/169 (90%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATATLHTNRGDIKIALFGNHAPKTV NFVGLA G+K+Y+T NA+G +GPFYDGA+FHR
Sbjct 29 TATATLHTNRGDIKIALFGNHAPKTVENFVGLADGSKEYTTANAAGTKTGPFYDGAIFHR 88
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTG GGPGYKF DEFHPELQFD+ YLLAMANAGPGTNGSQFFIT G
Sbjct 89 VIDGFMIQGGDPTGTGTGGPGYKFGDEFHPELQFDRSYLLAMANAGPGTNGSQFFITTGP 148
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLNRRHTIFGEV+D +S++VV+AIS TA D DRP +PVVI SITIS
Sbjct 149 TPHLNRRHTIFGEVLDDDSKKVVDAISSTAVDRGDRPVEPVVINSITIS 197
>gi|317506059|ref|ZP_07963887.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [Segniliparus
rugosus ATCC BAA-974]
gi|316255631|gb|EFV14873.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [Segniliparus
rugosus ATCC BAA-974]
Length=175
Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/171 (78%), Positives = 150/171 (88%), Gaps = 0/171 (0%)
Query 12 LATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVF 71
+AT TATLHTNRGDI + LFGNHAPKTVANFVGLA G K+Y+ +NASG GPFYDG+VF
Sbjct 3 IATQTATLHTNRGDIVVELFGNHAPKTVANFVGLASGEKEYTEENASGELEGPFYDGSVF 62
Query 72 HRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITV 131
HRVI GFMIQGGDPTGTGRGGPGY+F DEFHP+L+FDKPYLLAMANAGPGTNGSQFFITV
Sbjct 63 HRVIDGFMIQGGDPTGTGRGGPGYRFEDEFHPDLKFDKPYLLAMANAGPGTNGSQFFITV 122
Query 132 GKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLNRRHTIFGEV+D S++VV+AI+ TATD NDRP D V+IE +T+
Sbjct 123 DATPHLNRRHTIFGEVVDEASKKVVDAIATTATDRNDRPVDAVMIERVTVQ 173
>gi|326383927|ref|ZP_08205611.1| peptidyl-prolyl cis-trans isomerase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197386|gb|EGD54576.1| peptidyl-prolyl cis-trans isomerase [Gordonia neofelifaecis NRRL
B-59395]
Length=173
Score = 257 bits (656), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/167 (82%), Positives = 145/167 (87%), Gaps = 0/167 (0%)
Query 16 TATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVI 75
TATLHTNRGDI I LF NHAP TV NFVGLA G+K+YST NA G SGPFYDGAVFHRVI
Sbjct 7 TATLHTNRGDIVIELFPNHAPVTVENFVGLADGSKEYSTTNAKGEASGPFYDGAVFHRVI 66
Query 76 QGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTP 135
GFMIQGGDPTGTGRGGPGY+F DEFHPELQFD+PYLLAMANAGPGTNGSQFFITVG TP
Sbjct 67 NGFMIQGGDPTGTGRGGPGYQFKDEFHPELQFDRPYLLAMANAGPGTNGSQFFITVGATP 126
Query 136 HLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
HLNRRHTIFGEV D+ SQ VV+AI+ TATD DRP D VVIES+ +S
Sbjct 127 HLNRRHTIFGEVKDSASQAVVDAIATTATDRMDRPVDAVVIESVELS 173
>gi|21322798|dbj|BAB97427.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family [Corynebacterium glutamicum ATCC 13032]
Length=187
Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/169 (80%), Positives = 146/169 (87%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATA LHTNRGDI I LFGNHAP+TVANFVGLAQGTKDY + NA G GPFY+G+VFHR
Sbjct 18 TATAILHTNRGDITIDLFGNHAPETVANFVGLAQGTKDYQSANAQGDSEGPFYNGSVFHR 77
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTGRGGPGY FADEFHPEL+FD+ YLLAMANAGPGTNGSQFFITV
Sbjct 78 VIDGFMIQGGDPTGTGRGGPGYTFADEFHPELRFDRAYLLAMANAGPGTNGSQFFITVTP 137
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV DAESQ+VV+AI+ TATD DRP D VVIES+ I+
Sbjct 138 TPHLNNAHTIFGEVTDAESQKVVDAIATTATDRYDRPADAVVIESVEIT 186
>gi|145294090|ref|YP_001136911.1| hypothetical protein cgR_0048 [Corynebacterium glutamicum R]
gi|140844010|dbj|BAF53009.1| hypothetical protein [Corynebacterium glutamicum R]
Length=190
Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/169 (80%), Positives = 146/169 (87%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATA LHTNRGDI I LFGNHAP+TVANFVGLAQGTK+Y QNA G GPFY+G+VFHR
Sbjct 21 TATAILHTNRGDITIDLFGNHAPETVANFVGLAQGTKEYQAQNAQGDSEGPFYNGSVFHR 80
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTGRGGPGY FADEFHPEL+FD+ YLLAMANAGPGTNGSQFFITV
Sbjct 81 VIDGFMIQGGDPTGTGRGGPGYTFADEFHPELRFDRAYLLAMANAGPGTNGSQFFITVTP 140
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV DAESQ+VV+AI+ TATD DRP D VVIES+ I+
Sbjct 141 TPHLNNAHTIFGEVTDAESQKVVDAIATTATDRYDRPADAVVIESVEIT 189
>gi|19551284|ref|NP_599286.1| peptidyl-prolyl cis-trans isomerase (rotamase) [Corynebacterium
glutamicum ATCC 13032]
gi|344045582|gb|EGV41253.1| peptidyl-prolyl cis-trans isomerase (rotamase) [Corynebacterium
glutamicum S9114]
Length=190
Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/169 (80%), Positives = 146/169 (87%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATA LHTNRGDI I LFGNHAP+TVANFVGLAQGTKDY + NA G GPFY+G+VFHR
Sbjct 21 TATAILHTNRGDITIDLFGNHAPETVANFVGLAQGTKDYQSANAQGDSEGPFYNGSVFHR 80
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTGRGGPGY FADEFHPEL+FD+ YLLAMANAGPGTNGSQFFITV
Sbjct 81 VIDGFMIQGGDPTGTGRGGPGYTFADEFHPELRFDRAYLLAMANAGPGTNGSQFFITVTP 140
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV DAESQ+VV+AI+ TATD DRP D VVIES+ I+
Sbjct 141 TPHLNNAHTIFGEVTDAESQKVVDAIATTATDRYDRPADAVVIESVEIT 189
>gi|62388929|ref|YP_224331.1| peptidyl-prolyl cis-trans isomerase B [Corynebacterium glutamicum
ATCC 13032]
gi|41324262|emb|CAF18602.1| PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B [Corynebacterium glutamicum
ATCC 13032]
Length=174
Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/169 (80%), Positives = 146/169 (87%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATA LHTNRGDI I LFGNHAP+TVANFVGLAQGTKDY + NA G GPFY+G+VFHR
Sbjct 5 TATAILHTNRGDITIDLFGNHAPETVANFVGLAQGTKDYQSANAQGDSEGPFYNGSVFHR 64
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
VI GFMIQGGDPTGTGRGGPGY FADEFHPEL+FD+ YLLAMANAGPGTNGSQFFITV
Sbjct 65 VIDGFMIQGGDPTGTGRGGPGYTFADEFHPELRFDRAYLLAMANAGPGTNGSQFFITVTP 124
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV DAESQ+VV+AI+ TATD DRP D VVIES+ I+
Sbjct 125 TPHLNNAHTIFGEVTDAESQKVVDAIATTATDRYDRPADAVVIESVEIT 173
>gi|68535095|ref|YP_249800.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium jeikeium
K411]
gi|260579594|ref|ZP_05847463.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium jeikeium
ATCC 43734]
gi|68262694|emb|CAI36182.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium jeikeium
K411]
gi|258602235|gb|EEW15543.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium jeikeium
ATCC 43734]
Length=174
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/169 (80%), Positives = 145/169 (86%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATA LHTN+GDI I LFGNHAP+TVANFVGLAQGTK+YS NASG GPFYDGA+FHR
Sbjct 5 TATAILHTNQGDIAIDLFGNHAPETVANFVGLAQGTKEYSQPNASGTNEGPFYDGAIFHR 64
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
+I GFMIQGGDPTGTGRGGPGY+F DEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 65 IIDGFMIQGGDPTGTGRGGPGYQFGDEFHPELQFDRPFLLAMANAGPGTNGSQFFITVTA 124
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN RHTIFGEV D ESQ+VV IS+ ATD DRP D VVIES+ I
Sbjct 125 TPHLNNRHTIFGEVTDKESQKVVAKISRVATDRMDRPNDDVVIESVEIQ 173
>gi|38232667|ref|NP_938434.1| peptidyl-prolyl cis-trans isomerase A [Corynebacterium diphtheriae
NCTC 13129]
gi|38198925|emb|CAE48536.1| probable peptidyl-prolyl cis-trans isomerase A [Corynebacterium
diphtheriae]
Length=180
Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/171 (79%), Positives = 145/171 (85%), Gaps = 0/171 (0%)
Query 12 LATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVF 71
L TATA LHTNRGD+ I LFGNHAPKTV NFV LA GT +Y T+NASG GPFYDGAVF
Sbjct 9 LKTATAILHTNRGDVSIELFGNHAPKTVENFVTLANGTAEYKTENASGTNEGPFYDGAVF 68
Query 72 HRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITV 131
HRVI GFMIQGGDPTGTGRGGPGY FADEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 69 HRVIDGFMIQGGDPTGTGRGGPGYMFADEFHPELQFDRPFLLAMANAGPGTNGSQFFITV 128
Query 132 GKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV DA SQ+VV I++TATD DRP +PVVIES+ I+
Sbjct 129 VPTPHLNNHHTIFGEVTDAASQKVVLDIAQTATDRMDRPVEPVVIESVEIT 179
>gi|296394647|ref|YP_003659531.1| peptidylprolyl isomerase [Segniliparus rotundus DSM 44985]
gi|296181794|gb|ADG98700.1| Peptidylprolyl isomerase [Segniliparus rotundus DSM 44985]
Length=174
Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/170 (79%), Positives = 147/170 (87%), Gaps = 0/170 (0%)
Query 13 ATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFH 72
AT TATLHTNRGDIK+ LFGNHAPKTVANFVGLA G Y+ +NASG GPFYDG+VFH
Sbjct 4 ATQTATLHTNRGDIKVGLFGNHAPKTVANFVGLATGELAYTAENASGEAEGPFYDGSVFH 63
Query 73 RVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVG 132
RVI GFMIQGGDPTGTGRGGPGY+F DEFHPEL+FDKPYLLAMANAGPGTNGSQFFITV
Sbjct 64 RVIDGFMIQGGDPTGTGRGGPGYRFEDEFHPELKFDKPYLLAMANAGPGTNGSQFFITVD 123
Query 133 KTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLNR+HTIFGEV D ES++VV+AI+ T D +DRP DPV IE +T+S
Sbjct 124 ATPHLNRKHTIFGEVTDEESKKVVDAIATTEVDRSDRPVDPVFIERVTVS 173
>gi|337289637|ref|YP_004628658.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium ulcerans
BR-AD22]
gi|334697943|gb|AEG82739.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium ulcerans
BR-AD22]
Length=178
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/171 (78%), Positives = 144/171 (85%), Gaps = 0/171 (0%)
Query 12 LATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVF 71
L TATA LHTNRGD+ I LFGNHAPKTV NFV LA G+ DY T+NASG GPFYDGAVF
Sbjct 7 LKTATAILHTNRGDVAIELFGNHAPKTVENFVTLADGSADYKTENASGNAEGPFYDGAVF 66
Query 72 HRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITV 131
HRVI GFMIQGGDPTGTGRGGPGY FADEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 67 HRVIDGFMIQGGDPTGTGRGGPGYMFADEFHPELQFDRPFLLAMANAGPGTNGSQFFITV 126
Query 132 GKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV D SQ+VV I++TATD DRP +PVVIES+ I+
Sbjct 127 VPTPHLNNHHTIFGEVTDPASQKVVMDIAQTATDRMDRPVEPVVIESVEIT 177
>gi|237784672|ref|YP_002905377.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium kroppenstedtii
DSM 44385]
gi|237757584|gb|ACR16834.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium kroppenstedtii
DSM 44385]
Length=179
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/172 (78%), Positives = 148/172 (87%), Gaps = 0/172 (0%)
Query 10 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGA 69
S TATA LHTNRGDI I LFGNHAP+TV NFVGLA+GTKDYS +NASGG GPFYDGA
Sbjct 5 STQKTATAILHTNRGDISIDLFGNHAPQTVDNFVGLAKGTKDYSERNASGGEEGPFYDGA 64
Query 70 VFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFI 129
+FHRVI GFMIQGGDPTGTGRGGPGY+F DEFHPELQFD+PYLLAMANAGPGTNGSQFFI
Sbjct 65 IFHRVIDGFMIQGGDPTGTGRGGPGYRFGDEFHPELQFDRPYLLAMANAGPGTNGSQFFI 124
Query 130 TVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 181
TV TPHLN HTIFGEV DA+SQ+VV+ I++T TD DRP D +VI+S+ I
Sbjct 125 TVAPTPHLNNHHTIFGEVTDADSQKVVDTIAETKTDRFDRPLDDIVIDSVEI 176
>gi|343928756|ref|ZP_08768201.1| putative peptidyl-prolyl cis-trans isomerase [Gordonia alkanivorans
NBRC 16433]
gi|343761505|dbj|GAA15127.1| putative peptidyl-prolyl cis-trans isomerase [Gordonia alkanivorans
NBRC 16433]
Length=173
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/167 (79%), Positives = 145/167 (87%), Gaps = 0/167 (0%)
Query 16 TATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVI 75
+A +HTNRG IK+ LF NHAPKTV NFVGLA G+KDYS NASGG SGPFYDG+VFHRVI
Sbjct 7 SAVIHTNRGAIKVDLFPNHAPKTVENFVGLADGSKDYSKPNASGGNSGPFYDGSVFHRVI 66
Query 76 QGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTP 135
GFMIQGGDPTGTG GGPGY+F DEFHPELQFD+PYLLAMANAGPGTNGSQFFITVG TP
Sbjct 67 AGFMIQGGDPTGTGMGGPGYQFGDEFHPELQFDRPYLLAMANAGPGTNGSQFFITVGPTP 126
Query 136 HLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
HLNRRH+IFGEV D ESQ+VV+AI+ T+TD DRP D VVIE I ++
Sbjct 127 HLNRRHSIFGEVTDPESQQVVDAIATTSTDRQDRPLDAVVIEKIEVN 173
>gi|334695762|gb|AEG80559.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium ulcerans
809]
Length=178
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/171 (78%), Positives = 144/171 (85%), Gaps = 0/171 (0%)
Query 12 LATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVF 71
L TATA LHTNRGD+ I LFGNHAPKTV NFV LA G+ DY T+NASG GPFYDGAVF
Sbjct 7 LKTATAILHTNRGDVAIELFGNHAPKTVENFVTLADGSADYKTENASGTAEGPFYDGAVF 66
Query 72 HRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITV 131
HRVI GFMIQGGDPTGTGRGGPGY FADEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 67 HRVIDGFMIQGGDPTGTGRGGPGYMFADEFHPELQFDRPFLLAMANAGPGTNGSQFFITV 126
Query 132 GKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV D SQ+VV I++TATD DRP +PVVIES+ I+
Sbjct 127 VPTPHLNNHHTIFGEVTDPASQKVVMDIAQTATDRMDRPVEPVVIESVEIT 177
>gi|262200064|ref|YP_003271272.1| peptidylprolyl isomerase [Gordonia bronchialis DSM 43247]
gi|262083411|gb|ACY19379.1| Peptidylprolyl isomerase [Gordonia bronchialis DSM 43247]
Length=173
Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/167 (81%), Positives = 148/167 (89%), Gaps = 0/167 (0%)
Query 16 TATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVI 75
TAT+HTNRGDIK+ LF NHAPKTVANFVGLA G+KDYS NASGG SGPF+DG+VFHRVI
Sbjct 7 TATIHTNRGDIKVDLFPNHAPKTVANFVGLADGSKDYSKPNASGGNSGPFFDGSVFHRVI 66
Query 76 QGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTP 135
+GFMIQGGDPTGTG GGPGY+F DEFHPELQFD+PYLLAMANAGPGTNGSQFFITVG TP
Sbjct 67 EGFMIQGGDPTGTGTGGPGYQFEDEFHPELQFDRPYLLAMANAGPGTNGSQFFITVGPTP 126
Query 136 HLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
HLNRRHTIFGEV D SQ+VV+AI+ T+TD DRP D VVIE I I+
Sbjct 127 HLNRRHTIFGEVTDPASQQVVDAIATTSTDRRDRPLDEVVIEKIEIA 173
>gi|300857435|ref|YP_003782418.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium pseudotuberculosis
FRC41]
gi|300684889|gb|ADK27811.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium pseudotuberculosis
FRC41]
gi|302205175|gb|ADL09517.1| Peptidyl-prolyl cis-trans isomerase A [Corynebacterium pseudotuberculosis
C231]
gi|302329734|gb|ADL19928.1| Peptidyl-prolyl cis-trans isomerase A [Corynebacterium pseudotuberculosis
1002]
gi|308275417|gb|ADO25316.1| Peptidyl-prolyl cis-trans isomerase A [Corynebacterium pseudotuberculosis
I19]
gi|341823843|gb|AEK91364.1| Peptidyl-prolyl cis-trans isomerase A [Corynebacterium pseudotuberculosis
PAT10]
Length=178
Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/171 (77%), Positives = 144/171 (85%), Gaps = 0/171 (0%)
Query 12 LATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVF 71
L TATA LHTNRGD+ I LFGNHAPKTV NFV L+ G+ DY T+NASG GPFYDGAVF
Sbjct 7 LKTATAILHTNRGDVAIELFGNHAPKTVENFVTLSDGSADYKTENASGTTEGPFYDGAVF 66
Query 72 HRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITV 131
HR+I GFMIQGGDPTGTGRGGPGY FADEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 67 HRIIDGFMIQGGDPTGTGRGGPGYMFADEFHPELQFDRPFLLAMANAGPGTNGSQFFITV 126
Query 132 GKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV D SQ+VV I++TATD DRP +PVVIES+ I+
Sbjct 127 VPTPHLNNHHTIFGEVTDPASQKVVMDIAQTATDRMDRPVEPVVIESVEIT 177
>gi|172039730|ref|YP_001799444.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium urealyticum
DSM 7109]
gi|171851034|emb|CAQ04010.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium urealyticum
DSM 7109]
Length=174
Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/169 (78%), Positives = 141/169 (84%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
T TA LHTN GDI I LFGNHAPKTV NFVGLA GTK+YS NA G GPFYDGA+FHR
Sbjct 5 TETAILHTNYGDISIDLFGNHAPKTVENFVGLANGTKEYSQPNAQGSNEGPFYDGAIFHR 64
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
+I GFMIQGGDPTGTGRGGPGY+F DEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 65 IIDGFMIQGGDPTGTGRGGPGYQFEDEFHPELQFDRPFLLAMANAGPGTNGSQFFITVTA 124
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN RHTIFGEV D ESQ+VV IS+ ATD DRP D VVIES+ I+
Sbjct 125 TPHLNNRHTIFGEVTDKESQKVVAKISRVATDRMDRPNDDVVIESVEIT 173
>gi|25026585|ref|NP_736639.1| putative peptidylprolyl isomerase [Corynebacterium efficiens
YS-314]
gi|23491864|dbj|BAC16839.1| putative peptidylprolyl isomerase [Corynebacterium efficiens
YS-314]
Length=202
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/175 (76%), Positives = 144/175 (83%), Gaps = 0/175 (0%)
Query 7 VTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY 66
V + L TATA LHTNRGDI I LFGNHAP+TVANF+GLA+GTK+Y T NASG GPFY
Sbjct 26 VVSMTLKTATAILHTNRGDISIDLFGNHAPETVANFIGLAEGTKEYKTANASGSQEGPFY 85
Query 67 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 126
DGAVFHRVI FMIQGGDPTGTGRGGPGY F DEFHPEL+FD+ YLLAMANAGPGTNGSQ
Sbjct 86 DGAVFHRVIDRFMIQGGDPTGTGRGGPGYNFGDEFHPELRFDRAYLLAMANAGPGTNGSQ 145
Query 127 FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 181
FFIT TPHLN HTIFGEV D ESQ+VV+AI T TD DRP +PVVIES+ I
Sbjct 146 FFITTTPTPHLNNAHTIFGEVTDPESQKVVDAIGTTPTDRMDRPIEPVVIESVEI 200
>gi|336324597|ref|YP_004604563.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium resistens
DSM 45100]
gi|336100579|gb|AEI08399.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium resistens
DSM 45100]
Length=174
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/169 (77%), Positives = 142/169 (85%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATA LHTN GDI I LFGNHAPKTV NF+GLA+GTKDYS NA+G GPFYDGA+FHR
Sbjct 5 TATAILHTNHGDIAIDLFGNHAPKTVENFIGLAKGTKDYSQPNAAGENEGPFYDGAIFHR 64
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
+I GFMIQGGDPTGTGRGGPGY+F DEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 65 IIDGFMIQGGDPTGTGRGGPGYQFEDEFHPELQFDRPFLLAMANAGPGTNGSQFFITVTA 124
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN RHTIFGEV D ESQ+VV IS+ +T DRP D VVIES+ I
Sbjct 125 TPHLNNRHTIFGEVTDKESQKVVAKISRVSTGRMDRPVDDVVIESVEIQ 173
>gi|331694000|ref|YP_004330239.1| peptidylprolyl isomerase [Pseudonocardia dioxanivorans CB1190]
gi|326948689|gb|AEA22386.1| Peptidylprolyl isomerase [Pseudonocardia dioxanivorans CB1190]
Length=180
Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/176 (75%), Positives = 149/176 (85%), Gaps = 0/176 (0%)
Query 7 VTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFY 66
VT+ + TATL T+ GDI+I LF +HAPKTV NFVGLA GTK Y+ NA+GG SGPFY
Sbjct 4 VTDPGKSKQTATLRTSEGDIRINLFPDHAPKTVENFVGLAAGTKQYTQPNAAGGDSGPFY 63
Query 67 DGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQ 126
DG+VFHRVI GFMIQGGDPTGTGRGGPGY+FADEFHPELQFD+PYLLAMANAGPGTNGSQ
Sbjct 64 DGSVFHRVISGFMIQGGDPTGTGRGGPGYQFADEFHPELQFDRPYLLAMANAGPGTNGSQ 123
Query 127 FFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
FFITVG TPHLNRRHTIFGEV DAES+ VV+AI+ T TD +DRP PVVI+ + +
Sbjct 124 FFITVGPTPHLNRRHTIFGEVADAESRAVVDAIATTQTDRSDRPLTPVVIQRVEVQ 179
>gi|259508280|ref|ZP_05751180.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium efficiens
YS-314]
gi|259164098|gb|EEW48652.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium efficiens
YS-314]
Length=174
Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/170 (78%), Positives = 142/170 (84%), Gaps = 0/170 (0%)
Query 12 LATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVF 71
L TATA LHTNRGDI I LFGNHAP+TVANF+GLA+GTK+Y T NASG GPFYDGAVF
Sbjct 3 LKTATAILHTNRGDISIDLFGNHAPETVANFIGLAEGTKEYKTANASGSQEGPFYDGAVF 62
Query 72 HRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITV 131
HRVI FMIQGGDPTGTGRGGPGY F DEFHPEL+FD+ YLLAMANAGPGTNGSQFFIT
Sbjct 63 HRVIDRFMIQGGDPTGTGRGGPGYNFGDEFHPELRFDRAYLLAMANAGPGTNGSQFFITT 122
Query 132 GKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 181
TPHLN HTIFGEV D ESQ+VV+AI T TD DRP +PVVIES+ I
Sbjct 123 TPTPHLNNAHTIFGEVTDPESQKVVDAIGTTPTDRMDRPIEPVVIESVEI 172
>gi|255325721|ref|ZP_05366817.1| peptidyl-prolyl cis-trans isomerase B [Corynebacterium tuberculostearicum
SK141]
gi|255297215|gb|EET76536.1| peptidyl-prolyl cis-trans isomerase B [Corynebacterium tuberculostearicum
SK141]
Length=173
Score = 246 bits (629), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/169 (77%), Positives = 142/169 (85%), Gaps = 0/169 (0%)
Query 14 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHR 73
TATAT+HTN GDI I LFGNHAP TV NF+GLA+G KDYSTQNA G SGPFYDGA+FHR
Sbjct 5 TATATMHTNYGDIVIDLFGNHAPVTVENFIGLAKGEKDYSTQNAKGEQSGPFYDGAIFHR 64
Query 74 VIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK 133
+I+ FMIQGGDPTGTGRGGPGY+F DEFHPELQFD+P+LLAMANAGPGTNGSQFFITV
Sbjct 65 IIENFMIQGGDPTGTGRGGPGYQFQDEFHPELQFDRPFLLAMANAGPGTNGSQFFITVAP 124
Query 134 TPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLN HTIFGEV DA SQ VV I+K TD DRP + VVIESI I+
Sbjct 125 TPHLNNHHTIFGEVTDAASQEVVSKIAKVDTDRMDRPHEDVVIESIDIA 173
>gi|324997632|ref|ZP_08118744.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family protein [Pseudonocardia sp. P1]
Length=178
Score = 246 bits (629), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/170 (76%), Positives = 145/170 (86%), Gaps = 0/170 (0%)
Query 13 ATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFH 72
A TA LHTN GDI++ LFG+HAPKTVANFVGLA+GTKDY+ NASGG +GPFYDG++FH
Sbjct 7 AKTTAVLHTNEGDIRVELFGDHAPKTVANFVGLAEGTKDYTGPNASGGDTGPFYDGSIFH 66
Query 73 RVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVG 132
RVI GFMIQGGDPTGTGRGGPGY+F DEFHP+L+FD+PYLLAMANAGPGTNGSQFFITVG
Sbjct 67 RVISGFMIQGGDPTGTGRGGPGYQFGDEFHPDLKFDRPYLLAMANAGPGTNGSQFFITVG 126
Query 133 KTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 182
TPHLNRRHTIFGEV DAES+ VV+ I T T DRP + VVIE + I
Sbjct 127 PTPHLNRRHTIFGEVADAESRAVVDGIGNTTTGQADRPLNDVVIEKVEIE 176
Lambda K H
0.316 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 164464225230
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40