BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0010c
Length=141
Score E
Sequences producing significant alignments: (Bits) Value
gi|308370294|ref|ZP_07420941.2| conserved membrane protein [Myco... 275 1e-72
gi|15607152|ref|NP_214524.1| hypothetical protein Rv0010c [Mycob... 275 2e-72
gi|289441377|ref|ZP_06431121.1| conserved membrane protein [Myco... 274 4e-72
gi|289572586|ref|ZP_06452813.1| conserved membrane protein [Myco... 273 6e-72
gi|289445535|ref|ZP_06435279.1| conserved membrane protein [Myco... 272 1e-71
gi|254366470|ref|ZP_04982514.1| conserved membrane protein [Myco... 231 2e-59
gi|298527408|ref|ZP_07014817.1| conserved hypothetical protein [... 231 4e-59
gi|31791187|ref|NP_853680.1| hypothetical protein Mb0010c [Mycob... 216 1e-54
gi|183980047|ref|YP_001848338.1| hypothetical protein MMAR_0012 ... 210 6e-53
gi|118615931|ref|YP_904263.1| hypothetical protein MUL_0014 [Myc... 209 9e-53
gi|41406110|ref|NP_958946.1| hypothetical protein MAP0012c [Myco... 209 1e-52
gi|254548941|ref|ZP_05139388.1| hypothetical protein Mtube_00490... 201 2e-50
gi|15826876|ref|NP_301139.1| hypothetical protein ML0012 [Mycoba... 197 4e-49
gi|342860269|ref|ZP_08716921.1| hypothetical protein MCOL_15370 ... 196 7e-49
gi|296167121|ref|ZP_06849530.1| conserved hypothetical protein [... 192 1e-47
gi|108796992|ref|YP_637189.1| hypothetical protein Mmcs_0011 [My... 187 3e-46
gi|118469885|ref|YP_884445.1| hypothetical protein MSMEG_0025 [M... 179 1e-43
gi|240172110|ref|ZP_04750769.1| hypothetical protein MkanA1_2253... 167 4e-40
gi|120401046|ref|YP_950875.1| hypothetical protein Mvan_0018 [My... 162 1e-38
gi|254773064|ref|ZP_05214580.1| hypothetical protein MaviaA2_000... 162 1e-38
gi|145221410|ref|YP_001132088.1| hypothetical protein Mflv_0816 ... 162 1e-38
gi|254821350|ref|ZP_05226351.1| hypothetical protein MintA_15538... 145 2e-33
gi|118465709|ref|YP_879315.1| hypothetical protein MAV_0014 [Myc... 139 1e-31
gi|336462087|gb|EGO40929.1| Protein of unknown function (DUF2581... 138 3e-31
gi|315441710|ref|YP_004074589.1| hypothetical protein Mspyr1_001... 135 2e-30
gi|333988651|ref|YP_004521265.1| hypothetical protein JDM601_001... 101 3e-20
gi|169627135|ref|YP_001700784.1| hypothetical protein MAB_0028c ... 85.1 3e-15
gi|312137532|ref|YP_004004868.1| integral membrane protein [Rhod... 79.0 2e-13
gi|333917706|ref|YP_004491287.1| hypothetical protein AS9A_0027 ... 76.6 1e-12
gi|325677502|ref|ZP_08157166.1| hypothetical protein HMPREF0724_... 75.9 2e-12
gi|226362919|ref|YP_002780699.1| hypothetical protein ROP_35070 ... 72.8 2e-11
gi|111020679|ref|YP_703651.1| hypothetical protein RHA1_ro03692 ... 70.5 9e-11
gi|229491174|ref|ZP_04385002.1| conserved hypothetical protein [... 63.2 1e-08
gi|226303513|ref|YP_002763471.1| hypothetical protein RER_00240 ... 62.8 2e-08
gi|262200066|ref|YP_003271274.1| hypothetical protein Gbro_0022 ... 62.0 3e-08
gi|331694002|ref|YP_004330241.1| hypothetical protein Psed_0111 ... 61.6 4e-08
gi|343928758|ref|ZP_08768203.1| hypothetical protein GOALK_120_0... 58.9 2e-07
gi|256374175|ref|YP_003097835.1| hypothetical protein Amir_0015 ... 55.5 3e-06
gi|296269655|ref|YP_003652287.1| hypothetical protein Tbis_1681 ... 54.3 6e-06
gi|54022039|ref|YP_116281.1| hypothetical protein nfa750 [Nocard... 52.8 2e-05
gi|302531388|ref|ZP_07283730.1| predicted protein [Streptomyces ... 52.0 3e-05
gi|296137774|ref|YP_003645017.1| hypothetical protein Tpau_0024 ... 50.4 9e-05
gi|257054113|ref|YP_003131945.1| hypothetical protein Svir_00280... 48.9 3e-04
gi|330470717|ref|YP_004408460.1| hypothetical protein VAB18032_0... 48.1 4e-04
gi|134096654|ref|YP_001102315.1| hypothetical protein SACE_0036 ... 47.4 7e-04
gi|111226096|ref|YP_716890.1| hypothetical protein FRAAL6763 [Fr... 46.6 0.001
gi|325000790|ref|ZP_08121902.1| hypothetical protein PseP1_18582... 45.8 0.002
gi|271969536|ref|YP_003343732.1| hypothetical protein Sros_8341 ... 45.8 0.002
gi|238061763|ref|ZP_04606472.1| hypothetical protein MCAG_02729 ... 42.7 0.017
gi|336176301|ref|YP_004581676.1| hypothetical protein FsymDg_018... 41.2 0.049
>gi|308370294|ref|ZP_07420941.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308371561|ref|ZP_07425308.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308372789|ref|ZP_07429846.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
11 more sequence titles
Length=149
Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR
Sbjct 9 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 68
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG
Sbjct 69 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 128
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDPVEVLDALTAAGYAGRGQR
Sbjct 129 TDPVEVLDALTAAGYAGRGQR 149
>gi|15607152|ref|NP_214524.1| hypothetical protein Rv0010c [Mycobacterium tuberculosis H37Rv]
gi|15839384|ref|NP_334421.1| hypothetical protein MT0013 [Mycobacterium tuberculosis CDC1551]
gi|148659767|ref|YP_001281290.1| hypothetical protein MRA_0010 [Mycobacterium tuberculosis H37Ra]
34 more sequence titles
Length=141
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR
Sbjct 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG
Sbjct 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDPVEVLDALTAAGYAGRGQR
Sbjct 121 TDPVEVLDALTAAGYAGRGQR 141
>gi|289441377|ref|ZP_06431121.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289567895|ref|ZP_06448122.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289748472|ref|ZP_06507850.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289756069|ref|ZP_06515447.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289414296|gb|EFD11536.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289541648|gb|EFD45297.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289689059|gb|EFD56488.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289696656|gb|EFD64085.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=141
Score = 274 bits (700), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/141 (99%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR
Sbjct 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITPDGLAIRGWFRTQLLRHSNIKI+RIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG
Sbjct 61 LAITPDGLAIRGWFRTQLLRHSNIKIMRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDPVEVLDALTAAGYAGRGQR
Sbjct 121 TDPVEVLDALTAAGYAGRGQR 141
>gi|289572586|ref|ZP_06452813.1| conserved membrane protein [Mycobacterium tuberculosis K85]
gi|339630093|ref|YP_004721735.1| hypothetical protein MAF_00100 [Mycobacterium africanum GM041182]
gi|289537017|gb|EFD41595.1| conserved membrane protein [Mycobacterium tuberculosis K85]
gi|339329449|emb|CCC25084.1| putative conserved membrane protein [Mycobacterium africanum
GM041182]
Length=141
Score = 273 bits (698), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/141 (99%), Positives = 140/141 (99%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQTAWAPRTSGIAGCGAGGVVMAI SVTLVTDTPGRVLTGVAALGLILFASATWRARPR
Sbjct 1 MQQTAWAPRTSGIAGCGAGGVVMAIVSVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG
Sbjct 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDPVEVLDALTAAGYAGRGQR
Sbjct 121 TDPVEVLDALTAAGYAGRGQR 141
>gi|289445535|ref|ZP_06435279.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289418493|gb|EFD15694.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=141
Score = 272 bits (695), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/141 (99%), Positives = 140/141 (99%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR
Sbjct 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITP GLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG
Sbjct 61 LAITPAGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDPVEVLDALTAAGYAGRGQR
Sbjct 121 TDPVEVLDALTAAGYAGRGQR 141
>gi|254366470|ref|ZP_04982514.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
gi|134151982|gb|EBA44027.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
gi|323717349|gb|EGB26554.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=120
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/120 (99%), Positives = 120/120 (100%), Gaps = 0/120 (0%)
Query 22 VMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRH 81
+MAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRH
Sbjct 1 MMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRH 60
Query 82 SNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 141
SNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
Sbjct 61 SNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 120
>gi|298527408|ref|ZP_07014817.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497202|gb|EFI32496.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=119
Score = 231 bits (588), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%)
Query 23 MAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHS 82
MAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHS
Sbjct 1 MAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHS 60
Query 83 NIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 141
NIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
Sbjct 61 NIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 119
>gi|31791187|ref|NP_853680.1| hypothetical protein Mb0010c [Mycobacterium bovis AF2122/97]
gi|121635893|ref|YP_976116.1| hypothetical protein BCG_0010c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|121635920|ref|YP_976143.1| hypothetical protein BCG_0040c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
8 more sequence titles
Length=111
Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR
Sbjct 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG 110
LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG
Sbjct 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG 110
>gi|183980047|ref|YP_001848338.1| hypothetical protein MMAR_0012 [Mycobacterium marinum M]
gi|183173373|gb|ACC38483.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=141
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/141 (73%), Positives = 122/141 (87%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W+PRT+G+AGC GV+MA A+VT+VTD PGR+L GVAALGLILFA +WRARP+
Sbjct 1 MQQTQWSPRTAGVAGCALAGVLMATAAVTVVTDPPGRILAGVAALGLILFAGGSWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAIT +GLAIRGW RTQLLR ++IKIIRI+EFRR+ R VRLLEIE + + +LSRWDLG
Sbjct 61 LAITREGLAIRGWLRTQLLRPASIKIIRINEFRRHARTVRLLEIEADNDAMFVLSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDP++VLDALTAAGYAGRG+R
Sbjct 121 TDPLDVLDALTAAGYAGRGKR 141
>gi|118615931|ref|YP_904263.1| hypothetical protein MUL_0014 [Mycobacterium ulcerans Agy99]
gi|118568041|gb|ABL02792.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=141
Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/141 (74%), Positives = 122/141 (87%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W+PRT+GIAGC GV+MA A+VT+VTD PGR+L GVAALGLILFA +WRARP+
Sbjct 1 MQQTQWSPRTAGIAGCALAGVLMATAAVTVVTDPPGRILAGVAALGLILFAGESWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAIT +GLAIRGW RTQLLR ++IKIIRI+EFRR+ R VRLLEIE + + +LSRWDLG
Sbjct 61 LAITREGLAIRGWLRTQLLRPASIKIIRINEFRRHARTVRLLEIEGDNDAVFVLSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDP++VLDALTAAGYAGRG+R
Sbjct 121 TDPLDVLDALTAAGYAGRGER 141
>gi|41406110|ref|NP_958946.1| hypothetical protein MAP0012c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394458|gb|AAS02329.1| hypothetical protein MAP_0012c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=141
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/141 (72%), Positives = 120/141 (86%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W P +GIAGCG GV+MAIA+VT+VTD PGRVL GVAA GL++FA +WRARP+
Sbjct 1 MQQTRWEPHPAGIAGCGVAGVLMAIAAVTVVTDPPGRVLAGVAAAGLLVFAGMSWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITPDGLA+RGW+RTQ+L+ +IKIIRI EFRRYGR VRLLE+E+ G L++LSRWDLG
Sbjct 61 LAITPDGLAVRGWYRTQVLQRPDIKIIRIIEFRRYGRKVRLLEVESADGDLVVLSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
DP++VLDALTAAGYAG QR
Sbjct 121 ADPLQVLDALTAAGYAGPRQR 141
>gi|254548941|ref|ZP_05139388.1| hypothetical protein Mtube_00490 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|339293090|gb|AEJ45201.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339296739|gb|AEJ48849.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=104
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/104 (99%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 38 VLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGR 97
+LTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGR
Sbjct 1 MLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGR 60
Query 98 LVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 141
LVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
Sbjct 61 LVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 104
>gi|15826876|ref|NP_301139.1| hypothetical protein ML0012 [Mycobacterium leprae TN]
gi|221229354|ref|YP_002502770.1| hypothetical protein MLBr_00012 [Mycobacterium leprae Br4923]
gi|13092423|emb|CAC29520.1| putative membrane protein [Mycobacterium leprae]
gi|219932461|emb|CAR70105.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=137
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/137 (72%), Positives = 115/137 (84%), Gaps = 0/137 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQTAW PRT+ IAGCG G+V+AIA TL DTPG +LTG+AALGLILFA +WRARP+
Sbjct 1 MQQTAWGPRTARIAGCGGAGIVIAIACSTLDIDTPGFMLTGIAALGLILFAGLSWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAI PDGLA++GWFRT+L ++IKIIRI EFRR+GR VRLLEIE ++G L+ILSRWDLG
Sbjct 61 LAINPDGLAVQGWFRTRLFGPADIKIIRITEFRRFGRKVRLLEIEAINGDLVILSRWDLG 120
Query 121 TDPVEVLDALTAAGYAG 137
T P+EVLDAL AGYAG
Sbjct 121 TGPLEVLDALITAGYAG 137
>gi|342860269|ref|ZP_08716921.1| hypothetical protein MCOL_15370 [Mycobacterium colombiense CECT
3035]
gi|342132647|gb|EGT85876.1| hypothetical protein MCOL_15370 [Mycobacterium colombiense CECT
3035]
Length=141
Score = 196 bits (499), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 122/140 (88%), Gaps = 0/140 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W P T+GIAGCGA G++MAIA+VT+VTD PGR+L GVAA GLILFA +W ARP+
Sbjct 1 MQQTQWQPHTAGIAGCGAAGLLMAIAAVTVVTDPPGRILAGVAAAGLILFAGVSWHARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITP GLA+RGWFRTQLL+HS+IKIIRI EFRRYGR VRLLE+ET + L++ SRWDLG
Sbjct 61 LAITPGGLALRGWFRTQLLQHSDIKIIRIIEFRRYGRKVRLLEVETAADDLVLFSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQ 140
TDP++VLDALTAAGYAGR Q
Sbjct 121 TDPLQVLDALTAAGYAGRQQ 140
>gi|296167121|ref|ZP_06849530.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897525|gb|EFG77122.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=141
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/141 (78%), Positives = 119/141 (85%), Gaps = 0/141 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W PR +GIAGCGA GV+MAIASVT+VTD PGRVLTG+AA GLILFA ATWRARP+
Sbjct 1 MQQTQWEPRIAGIAGCGAAGVLMAIASVTVVTDPPGRVLTGIAAAGLILFAGATWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAIT GL RGWFRTQLLR ++IKIIRI EF R GR VRLLE+ET GGL + SRWDLG
Sbjct 61 LAITDGGLVHRGWFRTQLLRPADIKIIRITEFPRLGRKVRLLEVETADGGLRLFSRWDLG 120
Query 121 TDPVEVLDALTAAGYAGRGQR 141
TDP+EVLDALTAAGYAGR R
Sbjct 121 TDPIEVLDALTAAGYAGRHPR 141
>gi|108796992|ref|YP_637189.1| hypothetical protein Mmcs_0011 [Mycobacterium sp. MCS]
gi|119866076|ref|YP_936028.1| hypothetical protein Mkms_0019 [Mycobacterium sp. KMS]
gi|126432624|ref|YP_001068315.1| hypothetical protein Mjls_0011 [Mycobacterium sp. JLS]
gi|108767411|gb|ABG06133.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692165|gb|ABL89238.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232424|gb|ABN95824.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=139
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/137 (65%), Positives = 114/137 (84%), Gaps = 0/137 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W+P +GIAGCG G++MAIA+VT+VTD PGR+L G+AA+GLI FA +WRARP+
Sbjct 1 MQQTEWSPPAAGIAGCGFAGLLMAIAAVTVVTDPPGRLLAGIAAVGLITFAIMSWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAITP+G+A+RGW+ T++LR ++IKI+RI EFRR R +RLLEI+T L + +RWDLG
Sbjct 61 LAITPEGVAVRGWWHTRVLRQADIKIVRITEFRRLARKMRLLEIDTADDRLHVFTRWDLG 120
Query 121 TDPVEVLDALTAAGYAG 137
TDPV+VLDALTAAGY G
Sbjct 121 TDPVDVLDALTAAGYTG 137
>gi|118469885|ref|YP_884445.1| hypothetical protein MSMEG_0025 [Mycobacterium smegmatis str.
MC2 155]
gi|118171172|gb|ABK72068.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=135
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/135 (63%), Positives = 107/135 (80%), Gaps = 0/135 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W+P T+GIAGCG G++MAIA+VT++TD PGRVL G+AA+GL+ FAS + R+RP+
Sbjct 1 MQQTQWSPSTAGIAGCGIAGLMMAIAAVTVITDPPGRVLAGIAAVGLLTFASFSLRSRPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAIT DGL +RGW RT+ RH I IRI EFRR R VR+LEI+ G L++ +RWDLG
Sbjct 61 LAITDDGLVVRGWARTRTFRHDEIDTIRITEFRRLARKVRMLEIDAHDGRLVVFTRWDLG 120
Query 121 TDPVEVLDALTAAGY 135
TDP++VLDAL AAGY
Sbjct 121 TDPLDVLDALKAAGY 135
>gi|240172110|ref|ZP_04750769.1| hypothetical protein MkanA1_22530 [Mycobacterium kansasii ATCC
12478]
Length=114
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/113 (77%), Positives = 96/113 (85%), Gaps = 0/113 (0%)
Query 28 VTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKII 87
+TLVTD PGRV+ VAALGLILFA +WRARP+LAIT DGLAIRGW RTQLLR +IKII
Sbjct 1 MTLVTDPPGRVMAMVAALGLILFAGVSWRARPKLAITGDGLAIRGWLRTQLLRRLDIKII 60
Query 88 RIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQ 140
RI +FRRY R VRLLEIETV+ L ILSRWDLGTDP+ VLDALTAAGYAG G+
Sbjct 61 RISQFRRYARNVRLLEIETVNDRLFILSRWDLGTDPLNVLDALTAAGYAGPGR 113
>gi|120401046|ref|YP_950875.1| hypothetical protein Mvan_0018 [Mycobacterium vanbaalenii PYR-1]
gi|119953864|gb|ABM10869.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=140
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/136 (62%), Positives = 101/136 (75%), Gaps = 0/136 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT W P + I G G+VMA+ +VTLVTD PGR+L GVA+ GL++FA +WRARP+
Sbjct 1 MQQTQWGPPAASIVTAGVLGLVMAVGAVTLVTDPPGRILVGVASAGLVVFALMSWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAIT L RGWF + L ++I+ IRI EFRR GR +RLLEI+T G LL+LSRWDLG
Sbjct 61 LAITDGSLTYRGWFGVKRLTSADIERIRITEFRRLGRKMRLLEIDTRDGQLLVLSRWDLG 120
Query 121 TDPVEVLDALTAAGYA 136
TDP+ VLDALT AGYA
Sbjct 121 TDPLHVLDALTEAGYA 136
>gi|254773064|ref|ZP_05214580.1| hypothetical protein MaviaA2_00055 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=114
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/114 (71%), Positives = 96/114 (85%), Gaps = 0/114 (0%)
Query 28 VTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKII 87
+T+VTD PGRVL GVAA GL++FA +WRARP+LAITP GLA+RGW+RTQ+L +IKII
Sbjct 1 MTVVTDPPGRVLAGVAAAGLLVFAGMSWRARPKLAITPGGLAVRGWYRTQVLPRPDIKII 60
Query 88 RIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 141
RI EFRRYGR VRLLE+E+ G ++LSRWDLG DP++VLDALTAAGYAG QR
Sbjct 61 RIIEFRRYGRTVRLLEVESADGDPVVLSRWDLGADPLQVLDALTAAGYAGLRQR 114
>gi|145221410|ref|YP_001132088.1| hypothetical protein Mflv_0816 [Mycobacterium gilvum PYR-GCK]
gi|145213896|gb|ABP43300.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=140
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/136 (60%), Positives = 102/136 (75%), Gaps = 0/136 (0%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
MQQT+W P+T+G+ GVV+A+ +VTLVTD PGR+L G AA+GLI+FA +WRARP+
Sbjct 1 MQQTSWQPQTAGLVVQAILGVVLAVGAVTLVTDAPGRILIGFAAVGLIVFALMSWRARPK 60
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LAI+ D L RGWF + + ++IK IRI EFRR GR VRLLEI+T L +LSRWDL
Sbjct 61 LAISDDALVYRGWFTARRITTADIKRIRITEFRRIGRKVRLLEIDTTDDKLYVLSRWDLS 120
Query 121 TDPVEVLDALTAAGYA 136
TDP+ VLDALT AG+A
Sbjct 121 TDPLNVLDALTEAGFA 136
>gi|254821350|ref|ZP_05226351.1| hypothetical protein MintA_15538 [Mycobacterium intracellulare
ATCC 13950]
Length=89
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/87 (80%), Positives = 79/87 (91%), Gaps = 0/87 (0%)
Query 54 TWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLI 113
+WRARP+LAITPDGLA+RGWFRTQLL+ S+I IIRI EFRRYGR VRLLE+ET GGL++
Sbjct 2 SWRARPKLAITPDGLALRGWFRTQLLQQSDITIIRIIEFRRYGRKVRLLEVETADGGLVL 61
Query 114 LSRWDLGTDPVEVLDALTAAGYAGRGQ 140
SRWDLGTDP++VLDALTAAGYAGR Q
Sbjct 62 FSRWDLGTDPLDVLDALTAAGYAGRSQ 88
>gi|118465709|ref|YP_879315.1| hypothetical protein MAV_0014 [Mycobacterium avium 104]
gi|118166996|gb|ABK67893.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=93
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/93 (71%), Positives = 79/93 (85%), Gaps = 0/93 (0%)
Query 49 LFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVS 108
+FA +WRARP+LAITPDGLA+RGW+RTQ+L +IKIIRI EFRRYGR VRLLE+E+
Sbjct 1 MFAGMSWRARPKLAITPDGLAVRGWYRTQVLPRPDIKIIRIIEFRRYGRTVRLLEVESAD 60
Query 109 GGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR 141
G ++LSRWDLG DP++VLDALTAAGYAG QR
Sbjct 61 GDPVVLSRWDLGADPLQVLDALTAAGYAGPRQR 93
>gi|336462087|gb|EGO40929.1| Protein of unknown function (DUF2581) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=89
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/88 (74%), Positives = 78/88 (89%), Gaps = 0/88 (0%)
Query 54 TWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLI 113
+WRARP+LAITPDGLA+RGW+RTQ+L+ +IKIIRI EFRRYGR VRLLE+E+ G L++
Sbjct 2 SWRARPKLAITPDGLAVRGWYRTQVLQRPDIKIIRIIEFRRYGRKVRLLEVESADGDLVV 61
Query 114 LSRWDLGTDPVEVLDALTAAGYAGRGQR 141
LSRWDLG DP++VLDALTAAGYAG QR
Sbjct 62 LSRWDLGADPLQVLDALTAAGYAGPRQR 89
>gi|315441710|ref|YP_004074589.1| hypothetical protein Mspyr1_00160 [Mycobacterium sp. Spyr1]
gi|315260013|gb|ADT96754.1| hypothetical protein Mspyr1_00160 [Mycobacterium sp. Spyr1]
Length=113
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/109 (63%), Positives = 82/109 (76%), Gaps = 0/109 (0%)
Query 28 VTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKII 87
+TLVTD PGR+L G AA+GLI+FA +WRARP+LAI+ D L RGWF + + +IK I
Sbjct 1 MTLVTDAPGRILIGFAAVGLIVFALMSWRARPKLAISDDALVYRGWFTARRITTDDIKRI 60
Query 88 RIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYA 136
RI EFRR GR VRLLEI+T L +LSRWDL TDP+ VLDALT AG+A
Sbjct 61 RITEFRRIGRKVRLLEIDTTDDKLYVLSRWDLSTDPLNVLDALTEAGFA 109
>gi|333988651|ref|YP_004521265.1| hypothetical protein JDM601_0011 [Mycobacterium sp. JDM601]
gi|333484619|gb|AEF34011.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=92
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/91 (55%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
Query 47 LILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIET 106
+++FA +WR+RPRLA+T GL +RGW+RT+LL ++ +R+ +F+R GR LLEIET
Sbjct 1 MLVFAGFSWRSRPRLALTGQGLVLRGWWRTRLLTPGDLTRVRVTDFQRIGRTQHLLEIET 60
Query 107 VSGGLLILSRWDLGTDPVEVLDALTAAGYAG 137
LLILSRWDLGTDP V L+AAGY G
Sbjct 61 DDDDLLILSRWDLGTDPRHVFAVLSAAGYTG 91
>gi|169627135|ref|YP_001700784.1| hypothetical protein MAB_0028c [Mycobacterium abscessus ATCC
19977]
gi|169239102|emb|CAM60130.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=141
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/130 (47%), Positives = 87/130 (67%), Gaps = 1/130 (0%)
Query 6 WAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITP 65
W P+ +GI G+ + +AS VTD PGR+L +AALGL++FA+ +WR RP+L +
Sbjct 11 WGPKPAGILAVALLGIALGVASALFVTDAPGRLLAALAALGLLIFAAVSWRCRPKLRLAD 70
Query 66 DGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVE 125
DGL ++G R LL + + +++ EFRR GR RLLEIE+ L++L+RWDLGTDP +
Sbjct 71 DGLQMQGLTRHTLLPRTAVDSVKVTEFRRLGRRTRLLEIES-GDRLIVLNRWDLGTDPRD 129
Query 126 VLDALTAAGY 135
V +AL AA Y
Sbjct 130 VHEALRAARY 139
>gi|312137532|ref|YP_004004868.1| integral membrane protein [Rhodococcus equi 103S]
gi|311886871|emb|CBH46179.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=156
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/137 (42%), Positives = 73/137 (54%), Gaps = 8/137 (5%)
Query 6 WAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITP 65
W+ + AGGVVM A++ L D PGR L +AALG+ + A R RP+LAI
Sbjct 14 WSTPLGAVVALAAGGVVMVAAALLLGLDAPGRFLAVLAALGMFVLAFLGGRQRPKLAIVQ 73
Query 66 DG----LAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG----LLILSRW 117
DG LA ++ R +I+ +RI + R GR V +LEI+ V LLI RW
Sbjct 74 DGPAPALAATRLTGRRVYRRDSIERVRIVAYPRLGRRVPMLEIDAVDPDGTERLLIFGRW 133
Query 118 DLGTDPVEVLDALTAAG 134
DLG DPV V DAL G
Sbjct 134 DLGVDPVVVFDALAVHG 150
>gi|333917706|ref|YP_004491287.1| hypothetical protein AS9A_0027 [Amycolicicoccus subflavus DQS3-9A1]
gi|333479927|gb|AEF38487.1| hypothetical protein AS9A_0027 [Amycolicicoccus subflavus DQS3-9A1]
Length=165
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/143 (41%), Positives = 81/143 (57%), Gaps = 9/143 (6%)
Query 1 MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPR 60
+++ W+PR + + AGG+ ++ +V L + G LTG+AAL LI A A ARPR
Sbjct 11 VEELEWSPRPAALGVAAAGGITLSAVAVVLRAEPAGLFLTGLAALLLIGIAVAGSLARPR 70
Query 61 LAI-TPDG-----LAIRGWF-RTQLLRHSNIKIIRIDEFRRYGRLVRLLEIE--TVSGGL 111
LAI PD L R + + LR S I+ + I + R+GR V +LEIE S L
Sbjct 71 LAIRKPDDSDNPLLVFRSFLGKQHTLRESEIERVHIVRYPRWGRRVPMLEIELAPPSDRL 130
Query 112 LILSRWDLGTDPVEVLDALTAAG 134
+ILSRWDLGT+P++V L G
Sbjct 131 IILSRWDLGTEPLDVAHTLARHG 153
>gi|325677502|ref|ZP_08157166.1| hypothetical protein HMPREF0724_14949 [Rhodococcus equi ATCC
33707]
gi|325551749|gb|EGD21447.1| hypothetical protein HMPREF0724_14949 [Rhodococcus equi ATCC
33707]
Length=156
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/137 (41%), Positives = 72/137 (53%), Gaps = 8/137 (5%)
Query 6 WAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITP 65
W+ + AGGVVM A++ L D PGR L +AALG+ + A R RP+LAI
Sbjct 14 WSTPLGAVVALAAGGVVMVAAALLLGLDAPGRFLAVLAALGMFVLAFLGGRQRPKLAIVQ 73
Query 66 DG----LAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG----LLILSRW 117
DG LA ++ +I+ +RI + R GR V +LEI+ V LLI RW
Sbjct 74 DGPVPALAATRLTGRRVYGRDSIERVRIVAYPRLGRRVPMLEIDAVDPDGTERLLIFGRW 133
Query 118 DLGTDPVEVLDALTAAG 134
DLG DPV V DAL G
Sbjct 134 DLGVDPVVVFDALAVHG 150
>gi|226362919|ref|YP_002780699.1| hypothetical protein ROP_35070 [Rhodococcus opacus B4]
gi|226241406|dbj|BAH51754.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=152
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/124 (42%), Positives = 68/124 (55%), Gaps = 18/124 (14%)
Query 29 TLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAI--------RGWFRTQLLR 80
++ T+ GRVL VAA+GL+L A++ R RPRLA+ +G I G+ R Q+ R
Sbjct 35 SVSTEPAGRVLVCVAAVGLLLTAASALRQRPRLAVDKEGGGIVVRRLTGRHGYARAQIDR 94
Query 81 HSNIKIIRIDEFRRYGRLVRLLEI----ETVSGGLLILSRWDLGTDPVEVLDALTAAGYA 136
R+ + R GR V +LEI E + LLI RWDLGT+P +V DAL
Sbjct 95 ------ARLVRYPRLGRRVPMLEIDVRTEDGTERLLIFGRWDLGTNPEDVFDALAVHRLV 148
Query 137 GRGQ 140
GRGQ
Sbjct 149 GRGQ 152
>gi|111020679|ref|YP_703651.1| hypothetical protein RHA1_ro03692 [Rhodococcus jostii RHA1]
gi|110820209|gb|ABG95493.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=150
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/141 (39%), Positives = 78/141 (56%), Gaps = 6/141 (4%)
Query 6 WAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITP 65
W+ + + AGGV + +A +++ T+ GRVL VAALGL+L A++ R RPRLA+
Sbjct 10 WSTPLAAVIALAAGGVALGVAGLSVSTEPAGRVLVCVAALGLLLTAASALRQRPRLAVDK 69
Query 66 D--GLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEI----ETVSGGLLILSRWDL 119
+ G+ + S I+ R+ + R GR V +LEI E + L+I RWDL
Sbjct 70 EGGGIVVNRLSGRHAYARSEIERARLVRYPRLGRRVPMLEIDVRTEDGTERLMIFGRWDL 129
Query 120 GTDPVEVLDALTAAGYAGRGQ 140
GT+P +V DAL GRGQ
Sbjct 130 GTNPEDVFDALAVHRLVGRGQ 150
>gi|229491174|ref|ZP_04385002.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321912|gb|EEN87705.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=163
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/139 (35%), Positives = 68/139 (49%), Gaps = 9/139 (6%)
Query 5 AWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAIT 64
+WA + GG+ +AIAS+ T+ GR L +A +GL + R RPRLA+
Sbjct 19 SWATPMGVVYAMFGGGIALAIASIIAPTEPAGRFLLALAVIGLFVMGGLALRQRPRLAVI 78
Query 65 PDG----LAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETV-----SGGLLILS 115
D +A++ I +R+ + R GR V +LEI+ V + LLI
Sbjct 79 EDAGTKSIAVQRLRARHEFTREQIDRVRLVRYPRLGRRVPMLEIDIVDRPTDTEKLLIFG 138
Query 116 RWDLGTDPVEVLDALTAAG 134
RWDLGT P +VLD L G
Sbjct 139 RWDLGTSPEDVLDVLAVHG 157
>gi|226303513|ref|YP_002763471.1| hypothetical protein RER_00240 [Rhodococcus erythropolis PR4]
gi|226182628|dbj|BAH30732.1| hypothetical protein RER_00240 [Rhodococcus erythropolis PR4]
Length=163
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/139 (35%), Positives = 69/139 (50%), Gaps = 9/139 (6%)
Query 5 AWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAIT 64
+WA + GG+ +AIAS+ T+ GR L +A +GL + R RPRLA+
Sbjct 19 SWATPMGVVYAMFGGGIALAIASIIAPTEPAGRFLLALAVIGLFVMGGLALRQRPRLAVI 78
Query 65 PDG----LAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETV-----SGGLLILS 115
+ +A++ I +R+ + R GR V +LEI+ V + LLI
Sbjct 79 DNAGTKSIAVQRLRARHTFTREQIDRVRLVRYPRLGRRVPMLEIDIVDRPTDTEKLLIFG 138
Query 116 RWDLGTDPVEVLDALTAAG 134
RWDLGT P +VLD LT G
Sbjct 139 RWDLGTTPEDVLDVLTVHG 157
>gi|262200066|ref|YP_003271274.1| hypothetical protein Gbro_0022 [Gordonia bronchialis DSM 43247]
gi|262083413|gb|ACY19381.1| hypothetical protein Gbro_0022 [Gordonia bronchialis DSM 43247]
Length=164
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/149 (37%), Positives = 71/149 (48%), Gaps = 19/149 (12%)
Query 5 AWA-PRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAI 63
+WA PR + A C AGG+++ A+V D G ++ GVA + LI F RPRLAI
Sbjct 8 SWATPRAAAFALC-AGGLILLGAAVLAAPDAVGLLMMGVAGVLLIAFGGYALIIRPRLAI 66
Query 64 ---TPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG---------- 110
TP L IR T+ I IR+ RR GR V LE + +
Sbjct 67 DDATPPRLVIRTIGGTRTYAPEEIDRIRLLSLRRVGRRVGQLEFDLLPEAPVAHAGSGPR 126
Query 111 ----LLILSRWDLGTDPVEVLDALTAAGY 135
L++ SRWDLG D + V D L AG+
Sbjct 127 EDTKLVVFSRWDLGADLLGVADELRRAGF 155
>gi|331694002|ref|YP_004330241.1| hypothetical protein Psed_0111 [Pseudonocardia dioxanivorans
CB1190]
gi|326948691|gb|AEA22388.1| hypothetical protein Psed_0111 [Pseudonocardia dioxanivorans
CB1190]
Length=164
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/115 (38%), Positives = 61/115 (54%), Gaps = 16/115 (13%)
Query 33 DTPGRVLTGVAALGLILFASATW--RARPRLAITPDGLAIRGWF-RTQLLRHSNIKIIRI 89
D GR+ V LGL+L A W RARPRLA+ P+GL +RG F R++ + +R+
Sbjct 50 DPAGRLFAAV--LGLVLLVGAVWGTRARPRLAVGPEGLTVRGGFSRSRTHPWGQVTDVRV 107
Query 90 DEFRRYGRLVRLLEIET-----------VSGGLLILSRWDLGTDPVEVLDALTAA 133
+ RR+GR V L ++ + LL+ R DLG DPV+V + AA
Sbjct 108 LQTRRFGRTVATLAVDVRDESGPGADPDAAERLLVFGRLDLGADPVDVAATVLAA 162
>gi|343928758|ref|ZP_08768203.1| hypothetical protein GOALK_120_01850 [Gordonia alkanivorans NBRC
16433]
gi|343761507|dbj|GAA15129.1| hypothetical protein GOALK_120_01850 [Gordonia alkanivorans NBRC
16433]
Length=168
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (33%), Positives = 70/152 (47%), Gaps = 21/152 (13%)
Query 5 AWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAIT 64
AW+ GGV++ +V + D G VL G+A + L+ T RPRL ++
Sbjct 11 AWSTPVGAGIAGCIGGVILLGGAVVVSNDPAGSVLMGIAGVLLVALGVYTLLVRPRLELS 70
Query 65 ---PDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG----------- 110
P L +RG + ++ IR+ RR GR V LEI+ +
Sbjct 71 AGRPATLTVRGLTGRRSYPPDRVERIRLLSMRRVGRRVGQLEIDVLDDDADTFRRDDGSA 130
Query 111 -------LLILSRWDLGTDPVEVLDALTAAGY 135
LL+ SRWDLGTD + V+DAL AAG+
Sbjct 131 GPRDDTRLLVFSRWDLGTDLMSVVDALRAAGF 162
>gi|256374175|ref|YP_003097835.1| hypothetical protein Amir_0015 [Actinosynnema mirum DSM 43827]
gi|255918478|gb|ACU33989.1| hypothetical protein Amir_0015 [Actinosynnema mirum DSM 43827]
Length=140
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/108 (38%), Positives = 59/108 (55%), Gaps = 8/108 (7%)
Query 30 LVTDTPGRVLTG--VAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKII 87
+ D P RV+ G VA LG + A RP+LA+ GL +RG R + +K+
Sbjct 33 MSPDAPSRVMLGLAVALLGWMSLQGAL--VRPKLAVDETGLTVRGLRREHHMAWHEVKV- 89
Query 88 RIDEFRRYGRLVRLLEIETVSGG---LLILSRWDLGTDPVEVLDALTA 132
R+ RR GR+VR LE++ G L++L++ DLG DP +V + L A
Sbjct 90 RLQSTRRLGRVVRTLELDWERGEDERLVVLTQLDLGADPQDVAEVLHA 137
>gi|296269655|ref|YP_003652287.1| hypothetical protein Tbis_1681 [Thermobispora bispora DSM 43833]
gi|296092442|gb|ADG88394.1| hypothetical protein Tbis_1681 [Thermobispora bispora DSM 43833]
Length=131
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/131 (37%), Positives = 64/131 (49%), Gaps = 5/131 (3%)
Query 2 QQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRV-LTGVAALGLILFASATWRARPR 60
+ AW IA AG V+ A+ +V PG++ L GVAALG A R
Sbjct 1 MECAWRVPWQIIAVKAAGAVLCAVLAVA---GDPGQLFLAGVAALGFAGLALRDLLVPVR 57
Query 61 LAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLG 120
LA PDGL I G + + ++ IR + +RRYG LLEI+T + + SRWDLG
Sbjct 58 LAAGPDGLVIAGLTGRRRIPWDRVRGIRAEAYRRYGITTELLEIDT-GDDVHLFSRWDLG 116
Query 121 TDPVEVLDALT 131
+V AL
Sbjct 117 ARVPDVAGALA 127
>gi|54022039|ref|YP_116281.1| hypothetical protein nfa750 [Nocardia farcinica IFM 10152]
gi|54013547|dbj|BAD54917.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=153
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/132 (39%), Positives = 68/132 (52%), Gaps = 7/132 (5%)
Query 5 AWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAI- 63
+WA + G GG V+A+A+ D P R+L G+AA GL+ A R RPRL +
Sbjct 12 SWATPAPALVAVGLGGAVLAVAAFF-AGDAPSRLLVGLAAAGLLGLAVLGARQRPRLEVR 70
Query 64 --TPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGG---LLILSRWD 118
+P L +R + R I RI +RR GR +LEI+ LLI RWD
Sbjct 71 PGSPPVLVVRTFLGPTEYRPEQIIRARIVSYRRLGRRSPMLEIDVRHHDGERLLIFGRWD 130
Query 119 LGTDPVEVLDAL 130
LGT+P +V DAL
Sbjct 131 LGTNPQDVFDAL 142
>gi|302531388|ref|ZP_07283730.1| predicted protein [Streptomyces sp. AA4]
gi|302440283|gb|EFL12099.1| predicted protein [Streptomyces sp. AA4]
Length=147
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/132 (36%), Positives = 62/132 (47%), Gaps = 4/132 (3%)
Query 2 QQTAWAPRTSGIAGCGAGGVVMAIASV--TLVTDTPGRVLTGVAALGLILFASATWRARP 59
T+WAPR + + ++ + +V L D G VLTG+A L + FA RP
Sbjct 9 HPTSWAPRRNLVVMAWGLTTLLLVGTVLDALFGDGKGAVLTGLATLAVGAFAVHWTLVRP 68
Query 60 RLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDL 119
RL+ GLA R T L +R+ RR GR LE+E L I + DL
Sbjct 69 RLSADEHGLAARTLTGTHRLPWPG-TTVRLRSTRRLGRDGVTLELER-DEQLFIFGQTDL 126
Query 120 GTDPVEVLDALT 131
G DP +VLD LT
Sbjct 127 GEDPRDVLDVLT 138
>gi|296137774|ref|YP_003645017.1| hypothetical protein Tpau_0024 [Tsukamurella paurometabola DSM
20162]
gi|296025908|gb|ADG76678.1| hypothetical protein Tpau_0024 [Tsukamurella paurometabola DSM
20162]
Length=133
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/124 (34%), Positives = 60/124 (49%), Gaps = 2/124 (1%)
Query 7 APRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPD 66
APR+ G+ AG + A ++ ++ D G VL GV A+ L ++ RPRLA
Sbjct 6 APRSVGVVLLIAGIALGAATALGVIDDPVGIVLVGVGAVLLCYLGASVLVLRPRLAADAA 65
Query 67 GLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEV 126
G+ RG F + ++I R + +GR LLE+ T LL L RW+LG P V
Sbjct 66 GVTYRGAFGRKHFPWDGLEIKRTST-KHWGRESVLLEL-TRGDDLLFLGRWELGEAPTLV 123
Query 127 LDAL 130
L
Sbjct 124 AQQL 127
>gi|257054113|ref|YP_003131945.1| hypothetical protein Svir_00280 [Saccharomonospora viridis DSM
43017]
gi|256583985|gb|ACU95118.1| hypothetical protein Svir_00280 [Saccharomonospora viridis DSM
43017]
Length=144
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/131 (31%), Positives = 63/131 (49%), Gaps = 9/131 (6%)
Query 5 AWAPRTSGIAGCGAGGVVMAIASVTL-----VTDTPGRVLTGVAALGLILFASATWRARP 59
AWAP+ + G G V+ A++++ L D PG +L V + + + RP
Sbjct 7 AWAPKPGLV---GVGWVLTAVSAIALGWNITSGDRPGTLLLAVVSAAFLAASLHGTVVRP 63
Query 60 RLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDL 119
RL +G+ +R T S + + R+ RRYGR V LE++ G L + +L
Sbjct 64 RLLADSEGVRVRTLGGTHFHPWSRLGL-RLTTTRRYGRDVEALELDPTDGRLTVFGWVEL 122
Query 120 GTDPVEVLDAL 130
GTDP +V + L
Sbjct 123 GTDPHDVHEEL 133
>gi|330470717|ref|YP_004408460.1| hypothetical protein VAB18032_03890 [Verrucosispora maris AB-18-032]
gi|328813688|gb|AEB47860.1| hypothetical protein VAB18032_03890 [Verrucosispora maris AB-18-032]
Length=156
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/76 (48%), Positives = 45/76 (60%), Gaps = 6/76 (7%)
Query 60 RLAITPDGLAI-RGWFRTQLLRHSNIKIIRIDEFRRYGRLV--RLLEIETVSGGLLILSR 116
RLA+ P G+ + +GW Q L S ++ IR+ RR GR LEI+T S L + SR
Sbjct 58 RLAVDPSGITVPKGWTGRQHLPWSAVESIRVQ--RRPGRGFAGPALEIDT-SETLHLFSR 114
Query 117 WDLGTDPVEVLDALTA 132
DLGTDP EV DAL A
Sbjct 115 LDLGTDPEEVADALAA 130
>gi|134096654|ref|YP_001102315.1| hypothetical protein SACE_0036 [Saccharopolyspora erythraea NRRL
2338]
gi|291005692|ref|ZP_06563665.1| hypothetical protein SeryN2_14324 [Saccharopolyspora erythraea
NRRL 2338]
gi|133909277|emb|CAL99389.1| hypothetical protein SACE_0036 [Saccharopolyspora erythraea NRRL
2338]
Length=137
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/121 (34%), Positives = 59/121 (49%), Gaps = 4/121 (3%)
Query 15 GCGAGGVVMAIASVT---LVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIR 71
G A G V+ A+V L P R+ G + L ++ RPRL+ G+ +R
Sbjct 14 GLAASGWVLTAAAVAWWLLSGSAPDRLFVGAVVVVLAAASAYATLCRPRLSADAAGITVR 73
Query 72 GWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALT 131
G R + +R + R GR V +L ++T L++L+R +LG DPVEV DAL
Sbjct 74 G-LRGRRSWPWAAVTVRTERSSRLGRTVEVLVLDTADDELVVLTRLELGADPVEVADALN 132
Query 132 A 132
A
Sbjct 133 A 133
>gi|111226096|ref|YP_716890.1| hypothetical protein FRAAL6763 [Frankia alni ACN14a]
gi|111153628|emb|CAJ65386.1| hypothetical protein FRAAL6763 [Frankia alni ACN14a]
Length=163
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/98 (38%), Positives = 51/98 (53%), Gaps = 3/98 (3%)
Query 33 DTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEF 92
D GR+L GV A GL + A ARP L ++P GL + R + L + + +R
Sbjct 57 DAAGRLLVGVLAAGLWVLAVRDLLARPTLRVSPAGLDLVDGLRRRHLPWAAVLRVRAGTL 116
Query 93 RRYGRLVRL--LEIETVSGGLLILSRWDLGTDPVEVLD 128
R V L LE+ET+ G +L L+R LGTDP V +
Sbjct 117 THNRRAVHLRTLEVETIDGPIL-LTRRQLGTDPGPVAE 153
>gi|325000790|ref|ZP_08121902.1| hypothetical protein PseP1_18582 [Pseudonocardia sp. P1]
Length=151
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (41%), Positives = 45/79 (57%), Gaps = 4/79 (5%)
Query 56 RARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIE--TVSGG--L 111
RARPRL PDG+ IR T+ S + +R+ RR+GR LLE++ V G L
Sbjct 66 RARPRLEAGPDGVTIRRLTWTRHAPWSRVDDVRVLRTRRFGRESALLELDLRDVDGHERL 125
Query 112 LILSRWDLGTDPVEVLDAL 130
++L R +LG DP +V + L
Sbjct 126 IVLGRPELGEDPEDVAEVL 144
>gi|271969536|ref|YP_003343732.1| hypothetical protein Sros_8341 [Streptosporangium roseum DSM
43021]
gi|270512711|gb|ACZ90989.1| hypothetical protein Sros_8341 [Streptosporangium roseum DSM
43021]
Length=139
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/126 (32%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query 6 WAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITP 65
W R + G +V A+A+ V D G +L G A + + A A RL+
Sbjct 8 WRVRRDLLVLKGVAALVFAVATALSVGDPRGMILAGAATVIMAALALRDVLAPVRLSADS 67
Query 66 DGLAI-RGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPV 124
+GLA+ +G+ ++ L S ++ IR+D R+ LLEI+T + +LS++DLG
Sbjct 68 EGLAVVKGFAGSRRLPWSEVERIRVDTRSRFTSRTGLLEIDT-GEEVFLLSQFDLGAPCQ 126
Query 125 EVLDAL 130
EV D L
Sbjct 127 EVADEL 132
>gi|238061763|ref|ZP_04606472.1| hypothetical protein MCAG_02729 [Micromonospora sp. ATCC 39149]
gi|237883574|gb|EEP72402.1| hypothetical protein MCAG_02729 [Micromonospora sp. ATCC 39149]
Length=157
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/97 (38%), Positives = 50/97 (52%), Gaps = 2/97 (2%)
Query 38 VLTGVAALGLILFASATWRARPRLAITPDGLA-IRGWFRTQLLRHSNIKIIRIDEFRRYG 96
VL GV A GL +A A RLA+ P G+ +RG+ + L + ++ I +D R G
Sbjct 48 VLAGVVAAGLAGWALRDLLAPVRLAVDPTGITVVRGFAGRRRLDWAAVEAITVDRRPRLG 107
Query 97 RLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAA 133
+LEI+ L + R+DL P EV DAL AA
Sbjct 108 LSTEVLEIDA-GESLHLFGRYDLDAPPGEVADALRAA 143
>gi|336176301|ref|YP_004581676.1| hypothetical protein FsymDg_0183 [Frankia symbiont of Datisca
glomerata]
gi|334857281|gb|AEH07755.1| hypothetical protein FsymDg_0183 [Frankia symbiont of Datisca
glomerata]
Length=202
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/96 (34%), Positives = 49/96 (52%), Gaps = 3/96 (3%)
Query 33 DTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEF 92
D PGR+L GVA +GL+L A ARP L + G+ + + L + + +R
Sbjct 96 DRPGRLLIGVAGVGLLLLAGRDALARPALRVDQGGVDLVDGIHRRHLPWAAVLRVRAGTL 155
Query 93 --RRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEV 126
R VR+L +ET+ G ++ LSR LG +P +
Sbjct 156 THNRRAVHVRVLTVETIDGPVM-LSRRQLGAEPERI 190
Lambda K H
0.325 0.140 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130347035928
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40