BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0012
Length=262
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607154|ref|NP_214526.1| hypothetical protein Rv0012 [Mycoba... 533 1e-149
gi|15839386|ref|NP_334423.1| hypothetical protein MT0015 [Mycoba... 528 3e-148
gi|148821203|ref|YP_001285957.1| hypothetical protein TBFG_10012... 526 9e-148
gi|31791189|ref|NP_853682.1| hypothetical protein Mb0012 [Mycoba... 526 1e-147
gi|289747782|ref|ZP_06507160.1| conserved hypothetical protein [... 525 3e-147
gi|323717351|gb|EGB26556.1| membrane protein [Mycobacterium tube... 494 7e-138
gi|254548944|ref|ZP_05139391.1| hypothetical protein Mtube_00505... 492 2e-137
gi|339293091|gb|AEJ45202.1| hypothetical protein CCDC5079_0012 [... 491 6e-137
gi|308394016|ref|ZP_07491585.2| conserved membrane protein [Myco... 461 7e-128
gi|336462089|gb|EGO40931.1| hypothetical protein MAPs_24220 [Myc... 374 9e-102
gi|41406112|ref|NP_958948.1| hypothetical protein MAP0014 [Mycob... 374 1e-101
gi|342860267|ref|ZP_08716919.1| hypothetical protein MCOL_15360 ... 370 1e-100
gi|289764128|ref|ZP_06523506.1| conserved membrane protein [Myco... 369 3e-100
gi|254821348|ref|ZP_05226349.1| hypothetical protein MintA_15528... 367 7e-100
gi|183980049|ref|YP_001848340.1| hypothetical protein MMAR_0014 ... 362 2e-98
gi|118615933|ref|YP_904265.1| hypothetical protein MUL_0016 [Myc... 358 4e-97
gi|296167119|ref|ZP_06849528.1| conserved hypothetical protein [... 356 2e-96
gi|240172112|ref|ZP_04750771.1| hypothetical protein MkanA1_2254... 355 4e-96
gi|126432626|ref|YP_001068317.1| hypothetical protein Mjls_0013 ... 350 9e-95
gi|108796994|ref|YP_637191.1| hypothetical protein Mmcs_0013 [My... 350 9e-95
gi|145221408|ref|YP_001132086.1| hypothetical protein Mflv_0814 ... 342 5e-92
gi|333988653|ref|YP_004521267.1| hypothetical protein JDM601_001... 335 3e-90
gi|120401048|ref|YP_950877.1| hypothetical protein Mvan_0020 [My... 330 1e-88
gi|118469202|ref|YP_884447.1| hypothetical protein MSMEG_0027 [M... 321 9e-86
gi|169627138|ref|YP_001700787.1| hypothetical protein MAB_0031 [... 281 1e-73
gi|226362921|ref|YP_002780701.1| hypothetical protein ROP_35090 ... 244 1e-62
gi|111020681|ref|YP_703653.1| hypothetical protein RHA1_ro03694 ... 243 1e-62
gi|325677500|ref|ZP_08157164.1| membrane spanning protein DUF881... 235 4e-60
gi|312137534|ref|YP_004004870.1| membrane protein [Rhodococcus e... 235 4e-60
gi|333917708|ref|YP_004491289.1| hypothetical protein AS9A_0029 ... 224 1e-56
gi|229491126|ref|ZP_04384954.1| membrane spanning protein [Rhodo... 211 1e-52
gi|226303515|ref|YP_002763473.1| hypothetical protein RER_00260 ... 210 1e-52
gi|258650342|ref|YP_003199498.1| hypothetical protein Namu_0072 ... 187 2e-45
gi|309811408|ref|ZP_07705195.1| conserved hypothetical protein [... 176 3e-42
gi|284988661|ref|YP_003407215.1| hypothetical protein Gobs_0033 ... 176 4e-42
gi|117927226|ref|YP_871777.1| hypothetical protein Acel_0015 [Ac... 175 7e-42
gi|337767088|emb|CCB75799.1| conserved protein of unknown functi... 174 2e-41
gi|297158808|gb|ADI08520.1| hypothetical protein SBI_05400 [Stre... 170 2e-40
gi|256389274|ref|YP_003110838.1| hypothetical protein Caci_0042 ... 169 5e-40
gi|345007982|ref|YP_004810336.1| hypothetical protein Strvi_0268... 168 7e-40
gi|291452619|ref|ZP_06592009.1| conserved hypothetical protein [... 168 7e-40
gi|294630364|ref|ZP_06708924.1| membrane spanning protein DUF881... 167 1e-39
gi|84497158|ref|ZP_00995980.1| hypothetical protein JNB_13228 [J... 166 3e-39
gi|302552714|ref|ZP_07305056.1| membrane spanning protein DUF881... 166 3e-39
gi|329938620|ref|ZP_08288016.1| hypothetical protein SGM_3508 [S... 165 7e-39
gi|152963998|ref|YP_001359782.1| hypothetical protein Krad_0026 ... 164 1e-38
gi|302535553|ref|ZP_07287895.1| conserved hypothetical protein [... 164 1e-38
gi|297193263|ref|ZP_06910661.1| conserved hypothetical protein [... 162 6e-38
gi|294813769|ref|ZP_06772412.1| Putative membrane protein [Strep... 161 7e-38
gi|317123237|ref|YP_004097349.1| hypothetical protein Intca_0060... 161 8e-38
>gi|15607154|ref|NP_214526.1| hypothetical protein Rv0012 [Mycobacterium tuberculosis H37Rv]
gi|3261646|emb|CAB02446.1| PROBABLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis
H37Rv]
Length=262
Score = 533 bits (1372), Expect = 1e-149, Method: Compositional matrix adjust.
Identities = 262/262 (100%), Positives = 262/262 (100%), Gaps = 0/262 (0%)
Query 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV
Sbjct 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
Query 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL
Sbjct 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
Query 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR
Sbjct 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
Query 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDL 240
CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDL
Sbjct 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDL 240
Query 241 QIVGYADPVRMHFAQPAGPLDY 262
QIVGYADPVRMHFAQPAGPLDY
Sbjct 241 QIVGYADPVRMHFAQPAGPLDY 262
>gi|15839386|ref|NP_334423.1| hypothetical protein MT0015 [Mycobacterium tuberculosis CDC1551]
gi|148659771|ref|YP_001281294.1| hypothetical protein MRA_0014 [Mycobacterium tuberculosis H37Ra]
gi|167968142|ref|ZP_02550419.1| putative conserved membrane protein [Mycobacterium tuberculosis
H37Ra]
26 more sequence titles
Length=262
Score = 528 bits (1360), Expect = 3e-148, Method: Compositional matrix adjust.
Identities = 261/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%)
Query 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV
Sbjct 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
Query 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL
Sbjct 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
Query 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR
Sbjct 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
Query 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDL 240
CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGY EEVHPDL
Sbjct 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYREEVHPDL 240
Query 241 QIVGYADPVRMHFAQPAGPLDY 262
QIVGYADPVRMHFAQPAGPLDY
Sbjct 241 QIVGYADPVRMHFAQPAGPLDY 262
>gi|148821203|ref|YP_001285957.1| hypothetical protein TBFG_10012 [Mycobacterium tuberculosis F11]
gi|253796927|ref|YP_003029928.1| hypothetical protein TBMG_00012 [Mycobacterium tuberculosis KZN
1435]
gi|289552262|ref|ZP_06441472.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
6 more sequence titles
Length=262
Score = 526 bits (1356), Expect = 9e-148, Method: Compositional matrix adjust.
Identities = 260/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%)
Query 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRS+APRLV
Sbjct 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSNAPRLV 60
Query 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL
Sbjct 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
Query 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR
Sbjct 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
Query 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDL 240
CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGY EEVHPDL
Sbjct 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYREEVHPDL 240
Query 241 QIVGYADPVRMHFAQPAGPLDY 262
QIVGYADPVRMHFAQPAGPLDY
Sbjct 241 QIVGYADPVRMHFAQPAGPLDY 262
>gi|31791189|ref|NP_853682.1| hypothetical protein Mb0012 [Mycobacterium bovis AF2122/97]
gi|121635895|ref|YP_976118.1| hypothetical protein BCG_0012 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121635922|ref|YP_976145.1| hypothetical protein BCG_0042 [Mycobacterium bovis BCG str. Pasteur
1173P2]
20 more sequence titles
Length=262
Score = 526 bits (1355), Expect = 1e-147, Method: Compositional matrix adjust.
Identities = 260/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%)
Query 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV
Sbjct 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
Query 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSA+LAGVAAMNPVHGPGL
Sbjct 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAELAGVAAMNPVHGPGL 120
Query 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR
Sbjct 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
Query 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDL 240
CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGY EEVHPDL
Sbjct 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYREEVHPDL 240
Query 241 QIVGYADPVRMHFAQPAGPLDY 262
QIVGYADPVRMHFAQPAGPLDY
Sbjct 241 QIVGYADPVRMHFAQPAGPLDY 262
>gi|289747782|ref|ZP_06507160.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289760108|ref|ZP_06519486.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294995625|ref|ZP_06801316.1| hypothetical protein Mtub2_14247 [Mycobacterium tuberculosis
210]
gi|298527410|ref|ZP_07014819.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|289688310|gb|EFD55798.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289715672|gb|EFD79684.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298497204|gb|EFI32498.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|326905773|gb|EGE52706.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
Length=262
Score = 525 bits (1352), Expect = 3e-147, Method: Compositional matrix adjust.
Identities = 260/262 (99%), Positives = 260/262 (99%), Gaps = 0/262 (0%)
Query 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV
Sbjct 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
Query 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL
Sbjct 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
Query 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR
Sbjct 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
Query 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDL 240
CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGY EEVHPDL
Sbjct 181 CVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYREEVHPDL 240
Query 241 QIVGYADPVRMHFAQPAGPLDY 262
QIVGYADPVRMHFAQPA PLDY
Sbjct 241 QIVGYADPVRMHFAQPAVPLDY 262
>gi|323717351|gb|EGB26556.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=247
Score = 494 bits (1271), Expect = 7e-138, Method: Compositional matrix adjust.
Identities = 246/247 (99%), Positives = 246/247 (99%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT
Sbjct 1 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF
Sbjct 61 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGY EEVHPDLQIVGYADPVRMHFAQ
Sbjct 181 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYREEVHPDLQIVGYADPVRMHFAQ 240
Query 256 PAGPLDY 262
PAGPLDY
Sbjct 241 PAGPLDY 247
>gi|254548944|ref|ZP_05139391.1| hypothetical protein Mtube_00505 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|297632483|ref|ZP_06950263.1| hypothetical protein MtubK4_00075 [Mycobacterium tuberculosis
KZN 4207]
gi|297729454|ref|ZP_06958572.1| hypothetical protein MtubKR_00085 [Mycobacterium tuberculosis
KZN R506]
Length=247
Score = 492 bits (1266), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 245/247 (99%), Positives = 246/247 (99%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRS+APRLVDLVRRAQASVNRLAT
Sbjct 1 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSNAPRLVDLVRRAQASVNRLAT 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF
Sbjct 61 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGY EEVHPDLQIVGYADPVRMHFAQ
Sbjct 181 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYREEVHPDLQIVGYADPVRMHFAQ 240
Query 256 PAGPLDY 262
PAGPLDY
Sbjct 241 PAGPLDY 247
>gi|339293091|gb|AEJ45202.1| hypothetical protein CCDC5079_0012 [Mycobacterium tuberculosis
CCDC5079]
gi|339296740|gb|AEJ48850.1| hypothetical protein CCDC5180_0013 [Mycobacterium tuberculosis
CCDC5180]
Length=247
Score = 491 bits (1263), Expect = 6e-137, Method: Compositional matrix adjust.
Identities = 245/247 (99%), Positives = 245/247 (99%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT
Sbjct 1 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF
Sbjct 61 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGY EEVHPDLQIVGYADPVRMHFAQ
Sbjct 181 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYREEVHPDLQIVGYADPVRMHFAQ 240
Query 256 PAGPLDY 262
PA PLDY
Sbjct 241 PAVPLDY 247
>gi|308394016|ref|ZP_07491585.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308367763|gb|EFP56614.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
Length=232
Score = 461 bits (1185), Expect = 7e-128, Method: Compositional matrix adjust.
Identities = 230/232 (99%), Positives = 231/232 (99%), Gaps = 0/232 (0%)
Query 31 VCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGR 90
+CLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGR
Sbjct 1 MCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGR 60
Query 91 SVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDDLVVHQQD 150
SVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDDLVVHQQD
Sbjct 61 SVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDDLVVHQQD 120
Query 151 IEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQA 210
IEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQA
Sbjct 121 IEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQA 180
Query 211 ALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGPLDY 262
ALAAAPLVTLYKQYVVRFGLGY EEVHPDLQIVGYADPVRMHFAQPAGPLDY
Sbjct 181 ALAAAPLVTLYKQYVVRFGLGYREEVHPDLQIVGYADPVRMHFAQPAGPLDY 232
>gi|336462089|gb|EGO40931.1| hypothetical protein MAPs_24220 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=247
Score = 374 bits (959), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 201/247 (82%), Positives = 219/247 (89%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
M+ R+S WRF VPLVCLLAGLLLAATHGVSGG EIRRSDAPRLVDLVR QASVNRL+
Sbjct 1 MVQTRQSPWRFGVPLVCLLAGLLLAATHGVSGGAEIRRSDAPRLVDLVRETQASVNRLSA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
+RE L +ID+ HGRS D ALAAM RRSA+LAG A M+PVHGPGLVVTLQDAQRDANGRF
Sbjct 61 QREQLAAKIDTAHGRSSDAALAAMLRRSAQLAGEAGMSPVHGPGLVVTLQDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDI+AVLNALW+AGAEAIQMQDQRIIA S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIQAVLNALWSAGAEAIQMQDQRIIATSVPRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTI AIG+AAAMQAALAAAPLVTLYKQY VRFGLGY EEV D+Q+VG+ +P R+HFAQ
Sbjct 181 PYTITAIGNAAAMQAALAAAPLVTLYKQYAVRFGLGYQEEVRSDVQVVGHFEPDRLHFAQ 240
Query 256 PAGPLDY 262
P GP+ Y
Sbjct 241 PNGPIGY 247
>gi|41406112|ref|NP_958948.1| hypothetical protein MAP0014 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118462237|ref|YP_879317.1| hypothetical protein MAV_0016 [Mycobacterium avium 104]
gi|254773066|ref|ZP_05214582.1| hypothetical protein MaviaA2_00065 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41394460|gb|AAS02331.1| hypothetical protein MAP_0014 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118163524|gb|ABK64421.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=247
Score = 374 bits (959), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 201/247 (82%), Positives = 219/247 (89%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
M+ R+S WRF VPLVCLLAGLLLAATHGVSGG EIRRSDAPRLVDLVR QASVNRL+
Sbjct 1 MVQTRQSPWRFGVPLVCLLAGLLLAATHGVSGGAEIRRSDAPRLVDLVRETQASVNRLSA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
+RE L +ID+ HGRS D ALAAM RRSA+LAG A M+PVHGPGLVVTLQDAQRDANGRF
Sbjct 61 QREQLAAKIDAAHGRSSDAALAAMLRRSAQLAGEAGMSPVHGPGLVVTLQDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDI+AVLNALW+AGAEAIQMQDQRIIA S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIQAVLNALWSAGAEAIQMQDQRIIATSVPRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTI AIG+AAAMQAALAAAPLVTLYKQY VRFGLGY EEV D+Q+VG+ +P R+HFAQ
Sbjct 181 PYTITAIGNAAAMQAALAAAPLVTLYKQYAVRFGLGYQEEVRSDVQVVGHFEPDRLHFAQ 240
Query 256 PAGPLDY 262
P GP+ Y
Sbjct 241 PNGPIGY 247
>gi|342860267|ref|ZP_08716919.1| hypothetical protein MCOL_15360 [Mycobacterium colombiense CECT
3035]
gi|342132645|gb|EGT85874.1| hypothetical protein MCOL_15360 [Mycobacterium colombiense CECT
3035]
Length=247
Score = 370 bits (949), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 201/247 (82%), Positives = 217/247 (88%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
MI RRS WR VP+VCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVR Q+SVNRLA
Sbjct 1 MIQTRRSPWRLGVPVVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRETQSSVNRLAA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
+REAL +ID+ HGRS D ALAAM RRS +LAG A M+PVHGPGLVVTL DAQRDANGRF
Sbjct 61 QREALAAKIDAAHGRSSDAALAAMLRRSNQLAGEAGMSPVHGPGLVVTLADAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDI AVLNALW+AGAEAIQMQDQRIIA S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDILAVLNALWSAGAEAIQMQDQRIIATSVPRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTI AIG+AAAMQAALAAAPLV LYKQYVVRFGLGY EEV D+Q+VG+ +P R+HFAQ
Sbjct 181 PYTITAIGNAAAMQAALAAAPLVVLYKQYVVRFGLGYTEEVKSDVQVVGHFEPDRLHFAQ 240
Query 256 PAGPLDY 262
P GP+ Y
Sbjct 241 PNGPIGY 247
>gi|289764128|ref|ZP_06523506.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
gi|289711634|gb|EFD75650.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
Length=193
Score = 369 bits (946), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 182/184 (99%), Positives = 183/184 (99%), Gaps = 0/184 (0%)
Query 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV 60
MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRS+APRLV
Sbjct 1 MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSNAPRLV 60
Query 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL
Sbjct 61 DLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGL 120
Query 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR
Sbjct 121 VVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIAR 180
Query 181 CVGN 184
CVG
Sbjct 181 CVGK 184
>gi|254821348|ref|ZP_05226349.1| hypothetical protein MintA_15528 [Mycobacterium intracellulare
ATCC 13950]
Length=247
Score = 367 bits (943), Expect = 7e-100, Method: Compositional matrix adjust.
Identities = 196/247 (80%), Positives = 216/247 (88%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
MI R+S WRF VP+VC LAGLLLAATHGVSGG EIR SDAPRLVDLVR Q+SVNRL
Sbjct 1 MIQTRQSPWRFGVPVVCALAGLLLAATHGVSGGAEIRGSDAPRLVDLVRETQSSVNRLNA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
ERE L +ID+ HGRS D ALAAM RRSA+LAG A MNPVHGPGLVVTL+DAQRDANGRF
Sbjct 61 EREELAKKIDTAHGRSSDAALAAMLRRSAQLAGQADMNPVHGPGLVVTLEDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDI+AVLNALW+AGAEAIQMQDQR+IA S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIQAVLNALWSAGAEAIQMQDQRLIATSVPRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTI AIG++AAMQAALAAAPLV LYKQYVVRFGLGY EEV D+Q+VG+ +P R+H+AQ
Sbjct 181 PYTITAIGNSAAMQAALAAAPLVVLYKQYVVRFGLGYREEVKSDVQVVGHFEPDRLHYAQ 240
Query 256 PAGPLDY 262
P GP+ Y
Sbjct 241 PNGPIAY 247
>gi|183980049|ref|YP_001848340.1| hypothetical protein MMAR_0014 [Mycobacterium marinum M]
gi|183173375|gb|ACC38485.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=247
Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/247 (79%), Positives = 213/247 (87%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
M D RRS WRF VPLVCLLAGLLLAATHGVSGG EIRRSDAPRLVDLVR++Q+SVNRL+
Sbjct 1 MTDERRSPWRFGVPLVCLLAGLLLAATHGVSGGAEIRRSDAPRLVDLVRQSQSSVNRLSA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
ER+ALT RID+ H RS D AL AM RR+ +LA A M+P HGPGLVVTL DAQRDANGRF
Sbjct 61 ERDALTARIDANHLRSSDAALTAMLRRARELASEADMDPAHGPGLVVTLNDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDI+AVLNA+W+AGAEAIQMQDQRIIA S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIDAVLNAMWSAGAEAIQMQDQRIIANSVVRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PY I AIGD AAMQAAL AAPLV LYKQYVVRFGLGY EE D+ + GY++PVRMH+AQ
Sbjct 181 PYIITAIGDPAAMQAALEAAPLVVLYKQYVVRFGLGYREEAKSDVNVAGYSEPVRMHYAQ 240
Query 256 PAGPLDY 262
P GP+ Y
Sbjct 241 PLGPVGY 247
>gi|118615933|ref|YP_904265.1| hypothetical protein MUL_0016 [Mycobacterium ulcerans Agy99]
gi|118568043|gb|ABL02794.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=247
Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/247 (79%), Positives = 212/247 (86%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
M D RRS WRF VPLVCLLAGLLLAATHGVSGG EIRRSDAPRLVDLVR++Q+SVNRL+
Sbjct 1 MTDERRSPWRFGVPLVCLLAGLLLAATHGVSGGAEIRRSDAPRLVDLVRQSQSSVNRLSA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
ER+ALT RID+ H RS D L AM RR+ +LA A M+P HGPGLVVTL DAQRDANGRF
Sbjct 61 ERDALTARIDANHLRSSDAVLTAMLRRARELASEADMDPAHGPGLVVTLNDAQRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDI+AVLNA+W+AGAEAIQMQ QRIIA S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIDAVLNAMWSAGAEAIQMQGQRIIANSVVRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PY I AIGDAAAMQAAL AAPLV LYKQYVVRFGLGY EE D+ + GY++PVRMH+AQ
Sbjct 181 PYIITAIGDAAAMQAALEAAPLVVLYKQYVVRFGLGYREEAKSDVNVAGYSEPVRMHYAQ 240
Query 256 PAGPLDY 262
P GP+ Y
Sbjct 241 PLGPVGY 247
>gi|296167119|ref|ZP_06849528.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897523|gb|EFG77120.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=247
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/247 (79%), Positives = 213/247 (87%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
M D S WRF VP+VCLLAGLLLAATHGVSGG EIRRSDAPRLVDLVR AQ+SVN L
Sbjct 1 MSDGPPSPWRFGVPVVCLLAGLLLAATHGVSGGAEIRRSDAPRLVDLVREAQSSVNHLNA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
R+AL+ +ID+ HGRS D ALAAM RRSA+LA A MNP HGPG+ VTL+DA RDANGRF
Sbjct 61 RRDALSAKIDAAHGRSSDRALAAMLRRSAELAAEADMNPEHGPGITVTLEDAPRDANGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDIEAVLNALW+AGAEAIQMQDQRI+A S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIEAVLNALWSAGAEAIQMQDQRIVATSVPRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTI AIG+ AAMQAALAAAPLVTLY+QYVVRFGLGY EEV PD+QIVG+ +P R+HFAQ
Sbjct 181 PYTITAIGNGAAMQAALAAAPLVTLYRQYVVRFGLGYREEVKPDVQIVGHTEPDRLHFAQ 240
Query 256 PAGPLDY 262
P G + Y
Sbjct 241 PLGTIGY 247
>gi|240172112|ref|ZP_04750771.1| hypothetical protein MkanA1_22540 [Mycobacterium kansasii ATCC
12478]
Length=247
Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/247 (81%), Positives = 220/247 (90%), Gaps = 0/247 (0%)
Query 16 MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLAT 75
M D RRS WRF VPLVCLLAGLLLAATHGVSGG EIRRSDAPRLVDLVR AQ+SVNRL
Sbjct 1 MTDERRSPWRFGVPLVCLLAGLLLAATHGVSGGAEIRRSDAPRLVDLVRHAQSSVNRLDA 60
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
+R+ALT +I++ H S DTALAAM RR+A+LAG A MNPVHGPG+VVTL DAQRDA+GRF
Sbjct 61 QRDALTKQIETAHIPSSDTALAAMLRRAAELAGEAGMNPVHGPGVVVTLNDAQRDAHGRF 120
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
PRDASPDDLVVHQQDI+AV NA+W+AGAEAIQMQDQRIIA S+ RCVGNTLLLNGRTYSP
Sbjct 121 PRDASPDDLVVHQQDIDAVFNAVWSAGAEAIQMQDQRIIASSVVRCVGNTLLLNGRTYSP 180
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PYTI AIG+ AAMQAALAAAPLVTLYKQYVVRFGLGY EEV D+Q+VG+++PVRMHFAQ
Sbjct 181 PYTITAIGNPAAMQAALAAAPLVTLYKQYVVRFGLGYHEEVKSDVQVVGHSEPVRMHFAQ 240
Query 256 PAGPLDY 262
P GP+ Y
Sbjct 241 PLGPVGY 247
>gi|126432626|ref|YP_001068317.1| hypothetical protein Mjls_0013 [Mycobacterium sp. JLS]
gi|126232426|gb|ABN95826.1| protein of unknown function DUF881 [Mycobacterium sp. JLS]
Length=278
Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 181/243 (75%), Positives = 201/243 (83%), Gaps = 2/243 (0%)
Query 22 SAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALT 81
S WRF VPLVCL AGLLLAATHGVSGG EIRRSDAPRLVDLVR AQ SV+RL ER+ L+
Sbjct 36 SGWRFGVPLVCLAAGLLLAATHGVSGGDEIRRSDAPRLVDLVREAQQSVDRLGAERDTLS 95
Query 82 TRIDSVHGRS--VDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDA 139
++D HG S D AL+A+ RSA LA A +NPV GPGLVVTL DAQRDA GRFPRDA
Sbjct 96 AQVDGHHGGSPGTDAALSAITNRSAALAAEAGLNPVKGPGLVVTLNDAQRDAEGRFPRDA 155
Query 140 SPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTI 199
SPDDLVVHQQDI+AVLNALW+AGAE +QMQDQRIIA S RCVGNTLLLNGRTYSPPY I
Sbjct 156 SPDDLVVHQQDIQAVLNALWSAGAEGVQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYVI 215
Query 200 AAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGP 259
AIGDA AMQAAL+A+PLVTLYKQYVVRFGLGY EE ++++VG+ +PVRM AQP GP
Sbjct 216 TAIGDAGAMQAALSASPLVTLYKQYVVRFGLGYTEEPRAEVELVGHTEPVRMKHAQPIGP 275
Query 260 LDY 262
+ Y
Sbjct 276 VGY 278
>gi|108796994|ref|YP_637191.1| hypothetical protein Mmcs_0013 [Mycobacterium sp. MCS]
gi|119866078|ref|YP_936030.1| hypothetical protein Mkms_0021 [Mycobacterium sp. KMS]
gi|108767413|gb|ABG06135.1| protein of unknown function DUF881 [Mycobacterium sp. MCS]
gi|119692167|gb|ABL89240.1| protein of unknown function DUF881 [Mycobacterium sp. KMS]
Length=278
Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 181/243 (75%), Positives = 201/243 (83%), Gaps = 2/243 (0%)
Query 22 SAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALT 81
S WRF VPLVCL AGLLLAATHGVSGG EIRRSDAPRLVDLVR AQ SV+RL ER+ L+
Sbjct 36 SGWRFGVPLVCLAAGLLLAATHGVSGGDEIRRSDAPRLVDLVREAQQSVDRLGAERDTLS 95
Query 82 TRIDSVHGRS--VDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDA 139
++D HG S D AL+A+ RSA LA A +NPV GPGLVVTL DAQRDA GRFPRDA
Sbjct 96 AQVDGHHGGSPGTDAALSAITNRSAALAAEAGLNPVKGPGLVVTLNDAQRDAEGRFPRDA 155
Query 140 SPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTI 199
SPDDLVVHQQDI+AVLNALW+AGAE +QMQDQRIIA S RCVGNTLLLNGRTYSPPY I
Sbjct 156 SPDDLVVHQQDIQAVLNALWSAGAEGVQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYVI 215
Query 200 AAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGP 259
AIGDA AMQAAL+A+PLVTLYKQYVVRFGLGY EE ++++VG+ +PVRM AQP GP
Sbjct 216 TAIGDAGAMQAALSASPLVTLYKQYVVRFGLGYTEEPRAEVELVGHTEPVRMKHAQPIGP 275
Query 260 LDY 262
+ Y
Sbjct 276 VGY 278
>gi|145221408|ref|YP_001132086.1| hypothetical protein Mflv_0814 [Mycobacterium gilvum PYR-GCK]
gi|315441712|ref|YP_004074591.1| hypothetical protein Mspyr1_00180 [Mycobacterium sp. Spyr1]
gi|145213894|gb|ABP43298.1| protein of unknown function DUF881 [Mycobacterium gilvum PYR-GCK]
gi|315260015|gb|ADT96756.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=253
Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/246 (70%), Positives = 195/246 (80%), Gaps = 3/246 (1%)
Query 19 RRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATERE 78
R+RS WRF VP+VC+ AGLLL T+GVSGG EIRRSDAPRLVDLVR AQ SV+RL+ E+
Sbjct 9 RKRSVWRFGVPVVCVAAGLLLGTTYGVSGGDEIRRSDAPRLVDLVREAQQSVDRLSAEQG 68
Query 79 ALTTRIDSVHGRS--VDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFP 136
AL R D+ HG S AL AM R LA A + P+ GPGLVVTL DAQRDA GRFP
Sbjct 69 ALALRFDNHHGGSPGAAAALTAMTDRGNALAAQAGLTPLRGPGLVVTLNDAQRDAQGRFP 128
Query 137 RDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPP 196
RDASPDDLVVHQQDI+ V+NA+W+AGAE IQ+QDQRIIA S RCVGNTLLLNGRTYSPP
Sbjct 129 RDASPDDLVVHQQDIQGVINAMWSAGAEGIQVQDQRIIATSAPRCVGNTLLLNGRTYSPP 188
Query 197 YTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQP 256
Y I+A+GD AMQAALA +PLVTLYK+Y VRFGLGY EE D+++VG+++ VRM FAQP
Sbjct 189 YVISAVGDPGAMQAALAESPLVTLYKRYAVRFGLGYTEETR-DVELVGHSESVRMKFAQP 247
Query 257 AGPLDY 262
GPL Y
Sbjct 248 MGPLGY 253
>gi|333988653|ref|YP_004521267.1| hypothetical protein JDM601_0013 [Mycobacterium sp. JDM601]
gi|333484621|gb|AEF34013.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=250
Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/243 (73%), Positives = 193/243 (80%), Gaps = 0/243 (0%)
Query 20 RRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREA 79
R SAWR VPLVCL AGLLLAATHGVSGG EIRR DAPRLVDLVR Q +V L +R+
Sbjct 8 RSSAWRVGVPLVCLSAGLLLAATHGVSGGKEIRRGDAPRLVDLVRATQFTVEELTDKRDT 67
Query 80 LTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDA 139
L + SVHGR AL+AM+ R+ +LA A + VHGPGLVVTL DAQRDANGRFPRDA
Sbjct 68 LAEAVGSVHGRGAGAALSAMRNRTDQLAEAAGLAAVHGPGLVVTLTDAQRDANGRFPRDA 127
Query 140 SPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTI 199
SPDDLVVHQQDI AVLNA+W+AGAEAIQMQDQRI A S RCVGNTLLL GRTYSPPY +
Sbjct 128 SPDDLVVHQQDISAVLNAMWSAGAEAIQMQDQRITAESAPRCVGNTLLLGGRTYSPPYVM 187
Query 200 AAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGP 259
AIGD AMQAALAAAPLVTLYKQYV+RFGLGY E+V DLQ+V P RM +A PAGP
Sbjct 188 TAIGDPDAMQAALAAAPLVTLYKQYVIRFGLGYSEQVSTDLQVVETPRPARMRYAVPAGP 247
Query 260 LDY 262
+DY
Sbjct 248 IDY 250
>gi|120401048|ref|YP_950877.1| hypothetical protein Mvan_0020 [Mycobacterium vanbaalenii PYR-1]
gi|119953866|gb|ABM10871.1| protein of unknown function DUF881 [Mycobacterium vanbaalenii
PYR-1]
Length=272
Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/245 (70%), Positives = 199/245 (82%), Gaps = 3/245 (1%)
Query 20 RRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREA 79
+RS WRF VP++C+ AGLLL ATHGVSGG EIRRSDAPRLVDLVR +Q SV+RL ER++
Sbjct 29 KRSVWRFGVPVICVAAGLLLGATHGVSGGDEIRRSDAPRLVDLVRESQQSVDRLGAERDS 88
Query 80 LTTRIDSVHGRS--VDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPR 137
L+ ID+ HG S D AL+A+ R LA A M P+ GPGLVVTL DAQRDA GRFPR
Sbjct 89 LSLEIDNHHGGSPGADAALSAIVERGDLLAAQAGMTPLRGPGLVVTLNDAQRDAQGRFPR 148
Query 138 DASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPY 197
DASPDDLVVHQQDI+AV+NALW+AGAE IQ+QDQRII S RCVGNTLLLNGRTYSPPY
Sbjct 149 DASPDDLVVHQQDIQAVINALWSAGAEGIQVQDQRIIGTSAPRCVGNTLLLNGRTYSPPY 208
Query 198 TIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPA 257
I+A+GD AMQAALAAAPLVTLYK+Y VRFGLGY EE ++++VG+ +PVRM +AQP
Sbjct 209 VISAVGDPGAMQAALAAAPLVTLYKRYAVRFGLGYTEESR-EVELVGHQEPVRMKYAQPL 267
Query 258 GPLDY 262
GP+ Y
Sbjct 268 GPVGY 272
>gi|118469202|ref|YP_884447.1| hypothetical protein MSMEG_0027 [Mycobacterium smegmatis str.
MC2 155]
gi|118170489|gb|ABK71385.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=249
Score = 321 bits (822), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 179/244 (74%), Positives = 203/244 (84%), Gaps = 2/244 (0%)
Query 21 RSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREAL 80
RS WR VP++CLLAGLLLAATHGVSGG EIRRSD+PRLVDLVR AQ SV+RLA +R+AL
Sbjct 6 RSRWRLGVPVICLLAGLLLAATHGVSGGDEIRRSDSPRLVDLVREAQQSVDRLAAQRDAL 65
Query 81 TTRIDSVHGRSVDT--ALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRD 138
+DS HG S + AL A+ R+A+LA A M+P+ GPGLVVTL DAQRDA GRFPRD
Sbjct 66 ALEVDSHHGGSPSSHAALDAITARTAQLAVDAGMDPMRGPGLVVTLNDAQRDAEGRFPRD 125
Query 139 ASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYT 198
A+PDDLVVHQQDI+AVLNALW+AGAE IQMQDQRIIA S RCVGNTLLLNGRTYSPPY
Sbjct 126 AAPDDLVVHQQDIQAVLNALWSAGAEGIQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYV 185
Query 199 IAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAG 258
I AIGDAAAMQAALA APLVTLYKQYV+RFGLGY EE ++ + G+ +PVRM +A+PAG
Sbjct 186 ITAIGDAAAMQAALAEAPLVTLYKQYVLRFGLGYTEEPKAEVTLAGHTEPVRMRYAKPAG 245
Query 259 PLDY 262
PL Y
Sbjct 246 PLGY 249
>gi|169627138|ref|YP_001700787.1| hypothetical protein MAB_0031 [Mycobacterium abscessus ATCC 19977]
gi|169239105|emb|CAM60133.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=238
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/227 (66%), Positives = 174/227 (77%), Gaps = 5/227 (2%)
Query 28 VPLVCLLAGLLLAATHGVSGGTEIRRSDAP--RLVDLVRRAQASVNRLATEREALTTRID 85
+PLVC LAG LLAATH VSGG+EIRR D+P RLVDLVR Q SV++L+ R+ L +
Sbjct 1 MPLVCALAGFLLAATHTVSGGSEIRRGDSPSPRLVDLVRETQKSVDKLSGTRDGLANEMA 60
Query 86 SVHGRSV--DTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDD 143
+ +S D+ +AA +A++A A + PV GPGLVVTL DA+RDA GRFPRDASPDD
Sbjct 61 AAREQSAGGDSQVAAALAETAEVADAAGVRPVTGPGLVVTLTDAKRDAYGRFPRDASPDD 120
Query 144 LVVHQQDIEAVLNALWNAGAEAIQMQ-DQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAI 202
LVVHQQD+E VLNALW+AGAEAIQMQ DQR++A S+ RCVGNTLLL+GRTYSPPY I AI
Sbjct 121 LVVHQQDVEGVLNALWSAGAEAIQMQDDQRLVASSVPRCVGNTLLLHGRTYSPPYVITAI 180
Query 203 GDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPV 249
GDA AMQAAL AAPLVTLY+QYV RFGLGY L++ GY D V
Sbjct 181 GDADAMQAALDAAPLVTLYRQYVARFGLGYTVTRGHHLEVAGYRDAV 227
>gi|226362921|ref|YP_002780701.1| hypothetical protein ROP_35090 [Rhodococcus opacus B4]
gi|226241408|dbj|BAH51756.1| hypothetical protein [Rhodococcus opacus B4]
Length=233
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/229 (54%), Positives = 160/229 (70%), Gaps = 2/229 (0%)
Query 20 RRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREA 79
R WR +V +VCL+AGLL+A T VS G EIR D+ RL DLVR AQ+ +++A R+
Sbjct 3 RSIFWRIAVLVVCLVAGLLVATTRQVSHGNEIRAGDSTRLSDLVRNAQSETDQVAETRDN 62
Query 80 LTTRIDSVH--GRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPR 137
L +++S+ + D+ +A S LA A + P+ GPG+ VTL DA RDA+G++P
Sbjct 63 LAAQVESLQQDAAASDSGVAQALADSKALATDAGLTPMTGPGVTVTLTDAPRDADGKYPV 122
Query 138 DASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPY 197
DASPDDLVVHQQD+++VLNALW GAEA+ MQDQRI+ S RC+GNTLLL+GRTYSPPY
Sbjct 123 DASPDDLVVHQQDVQSVLNALWVGGAEAVGMQDQRIVNTSAPRCIGNTLLLHGRTYSPPY 182
Query 198 TIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYA 246
++AIGD A ++AALA P + L+KQY RFGLGY E L + GYA
Sbjct 183 VMSAIGDPARLEAALANEPGIRLFKQYATRFGLGYSEAASGQLSVPGYA 231
>gi|111020681|ref|YP_703653.1| hypothetical protein RHA1_ro03694 [Rhodococcus jostii RHA1]
gi|110820211|gb|ABG95495.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=233
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/225 (55%), Positives = 159/225 (71%), Gaps = 2/225 (0%)
Query 24 WRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTR 83
WR +V +VCL+AGLL+A T VS G EIR D+ RL DLVR AQ+ +++A R+ L +
Sbjct 7 WRIAVLVVCLVAGLLVATTRQVSHGNEIRAGDSTRLSDLVRNAQSETDQVAETRDRLAAQ 66
Query 84 IDSVH--GRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASP 141
++S+ + D+ +A S LA A + P+ GPG+ VTL DA RDA+G++P DASP
Sbjct 67 VESLQQDAAASDSGVAQALADSKALATDAGLTPMTGPGVTVTLTDAPRDADGKYPVDASP 126
Query 142 DDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAA 201
DDLVVHQQD+++VLNALW GAEAI MQDQRI+ S RC+GNTLLL+GRTYSPPY ++A
Sbjct 127 DDLVVHQQDVQSVLNALWVGGAEAISMQDQRIVNTSAPRCIGNTLLLHGRTYSPPYVMSA 186
Query 202 IGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYA 246
IGD A ++AALA P + ++KQY RFGLGY E L + GYA
Sbjct 187 IGDPARLEAALANEPGIRVFKQYATRFGLGYSEAASGQLSVPGYA 231
>gi|325677500|ref|ZP_08157164.1| membrane spanning protein DUF881 [Rhodococcus equi ATCC 33707]
gi|325551747|gb|EGD21445.1| membrane spanning protein DUF881 [Rhodococcus equi ATCC 33707]
Length=254
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/235 (51%), Positives = 159/235 (68%), Gaps = 2/235 (0%)
Query 24 WRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTR 83
W +V +VCL+AGLL+A T VS G EIR +D+ RL DLVR+AQ V+R A R+ L +
Sbjct 18 WSIAVLVVCLVAGLLIATTREVSHGNEIRAADSTRLSDLVRQAQTEVDRAARTRDELAAQ 77
Query 84 IDSVHGRS--VDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASP 141
++ + + DT +A + S LA A + + G G+VVTL DA RDA+G++P ASP
Sbjct 78 VEELQETAAGTDTRVAEVLTESRALADAAGLTELSGRGVVVTLTDAPRDADGKYPAGASP 137
Query 142 DDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAA 201
DDLVVHQQD+++VLNALW GAEA+ MQDQRI+ S RC+GNTLLL+GRTYSPPY + A
Sbjct 138 DDLVVHQQDVQSVLNALWAGGAEAVAMQDQRIVNTSAPRCIGNTLLLHGRTYSPPYVVTA 197
Query 202 IGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQP 256
IGD A + A LA P + ++KQY VR+GLGY ++ L + Y + +A+P
Sbjct 198 IGDPARLAATLANEPGIKMFKQYAVRYGLGYTQQQSDALTVPAYTGQLHTEYARP 252
>gi|312137534|ref|YP_004004870.1| membrane protein [Rhodococcus equi 103S]
gi|311886873|emb|CBH46181.1| putative membrane protein [Rhodococcus equi 103S]
Length=254
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/235 (51%), Positives = 159/235 (68%), Gaps = 2/235 (0%)
Query 24 WRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTR 83
W +V +VCL+AGLL+A T VS G EIR +D+ RL DLVR+AQ V+R A R+ L +
Sbjct 18 WSIAVLVVCLVAGLLIATTREVSHGNEIRAADSTRLSDLVRQAQTEVDRAARTRDELAAQ 77
Query 84 IDSVHGRS--VDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASP 141
++ + + DT +A + S LA A + + G G+VVTL DA RDA+G++P ASP
Sbjct 78 VEELQETAAGTDTRVAEVLAESRALADAAGLTELSGRGVVVTLTDAPRDADGKYPAGASP 137
Query 142 DDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAA 201
DDLVVHQQD+++VLNALW GAEA+ MQDQRI+ S RC+GNTLLL+GRTYSPPY + A
Sbjct 138 DDLVVHQQDVQSVLNALWAGGAEAVAMQDQRIVNTSAPRCIGNTLLLHGRTYSPPYVVTA 197
Query 202 IGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQP 256
IGD A + A LA P + ++KQY VR+GLGY ++ L + Y + +A+P
Sbjct 198 IGDPARLAATLANEPGIKMFKQYAVRYGLGYTQQQSDALTVPAYTGQLHTEYARP 252
>gi|333917708|ref|YP_004491289.1| hypothetical protein AS9A_0029 [Amycolicicoccus subflavus DQS3-9A1]
gi|333479929|gb|AEF38489.1| Membrane spanning protein DUF881 [Amycolicicoccus subflavus DQS3-9A1]
Length=240
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/237 (49%), Positives = 150/237 (64%), Gaps = 1/237 (0%)
Query 21 RSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREAL 80
R WR+ VP+VC+ AG LLA+ H S G E+R RL DLV +++V + +R+AL
Sbjct 2 RKNWRYGVPVVCIAAGFLLASAHASSQGGELRELHTSRLSDLVSDVESTVRDVEQQRDAL 61
Query 81 TTRIDSVHGRSV-DTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDA 139
T ++ + D +A R LAG A+ V GPGLVVTL DA RD G +P A
Sbjct 62 TAQLREAQSEAASDQGVAQALDRLEPLAGPGALTEVAGPGLVVTLTDAPRDQYGNYPPGA 121
Query 140 SPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTI 199
SPDDLVVHQQD+++VLNALW GA AI +QD+RI S RC+GNTLLL+GR YSPPY I
Sbjct 122 SPDDLVVHQQDLQSVLNALWAGGATAIAVQDERITTWSAPRCIGNTLLLHGRAYSPPYVI 181
Query 200 AAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQP 256
AIGDA ++ +L + P V L++QY R+GLGY E +LQ+ Y + +A+P
Sbjct 182 TAIGDAEELEDSLDSEPGVRLFRQYAARYGLGYEVEAEDELQVAAYEGRPSLRYARP 238
>gi|229491126|ref|ZP_04384954.1| membrane spanning protein [Rhodococcus erythropolis SK121]
gi|229321864|gb|EEN87657.1| membrane spanning protein [Rhodococcus erythropolis SK121]
Length=237
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/230 (47%), Positives = 157/230 (69%), Gaps = 2/230 (0%)
Query 18 DRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATER 77
+ R+ W V VCL+AGL++A + +++ +++ RL DLVR AQA+ +++ +R
Sbjct 5 ESSRTVWHIGVLAVCLVAGLMVATAQRSAEENQLQVTESTRLSDLVRSAQANAEKVSADR 64
Query 78 EALTTRIDSVHGRSV--DTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
+ L ++DS+ + D +AA ++ A + + GPG+VVT+ DA R+A+G++
Sbjct 65 DELAAQLDSLQQDAARSDAGVAAALGDIKNISADAGLTEMTGPGVVVTMTDAPRNADGKY 124
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
P DA+PDDLVVHQQD+++VLNALW GAEA+ MQDQRII+ S RC+GNTLLL+GRTYSP
Sbjct 125 PVDATPDDLVVHQQDVQSVLNALWAGGAEAVGMQDQRIISTSAPRCIGNTLLLHGRTYSP 184
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGY 245
PY ++AIGD A ++AALAA P + +YKQY RFGLGY + + + Y
Sbjct 185 PYVMSAIGDVARLEAALAAEPGIRIYKQYATRFGLGYTQATPSQITVPAY 234
>gi|226303515|ref|YP_002763473.1| hypothetical protein RER_00260 [Rhodococcus erythropolis PR4]
gi|226182630|dbj|BAH30734.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=237
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/230 (47%), Positives = 156/230 (68%), Gaps = 2/230 (0%)
Query 18 DRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATER 77
+ R+ W V VCL+AGL++A + +++ +++ RL DLVR AQA+ +++ +R
Sbjct 5 ESSRTVWHIGVLAVCLVAGLMVATAQRSAEENQLQVTESTRLSDLVRSAQANAEKVSADR 64
Query 78 EALTTRIDSVHGRSV--DTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRF 135
+ L ++DS+ + D +AA ++ A + + GPG+VVT+ DA R+A G++
Sbjct 65 DELAAQLDSLQEDAARSDAGVAAALGDIKNISADAGLTEMTGPGVVVTMTDAPRNAEGKY 124
Query 136 PRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
P DA+PDDLVVHQQD+++VLNALW GAEA+ MQDQRII+ S RC+GNTLLL+GRTYSP
Sbjct 125 PVDATPDDLVVHQQDVQSVLNALWAGGAEAVGMQDQRIISTSAPRCIGNTLLLHGRTYSP 184
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGY 245
PY ++AIGD A ++AALAA P + +YKQY RFGLGY + + + Y
Sbjct 185 PYVMSAIGDVARLEAALAAEPGIRIYKQYATRFGLGYTQATPSQITVPAY 234
>gi|258650342|ref|YP_003199498.1| hypothetical protein Namu_0072 [Nakamurella multipartita DSM
44233]
gi|258553567|gb|ACV76509.1| protein of unknown function DUF881 [Nakamurella multipartita
DSM 44233]
Length=242
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/245 (43%), Positives = 139/245 (57%), Gaps = 7/245 (2%)
Query 17 IDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDL---VRRAQASVNRL 73
+ +R WR CL+AGLL+ HG + G ++ R VDL VR AQ V
Sbjct 1 MSKRALGWRVGAVASCLVAGLLIGVLHGYANGQDV----GTRSVDLSVVVRDAQERVLAA 56
Query 74 ATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANG 133
+ AL +ID V + + L A + PV GPGL V++ DA RD++G
Sbjct 57 DAKAAALQQQIDQAAAGDVSPQVEQARAGVDALEPAAGLVPVVGPGLRVSMSDAPRDSDG 116
Query 134 RFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTY 193
+P PDDLV+HQQD++A +NALW GAEA+ + DQR++ S RC+GNTLLL GRTY
Sbjct 117 NYPAGVDPDDLVIHQQDVQAAVNALWAGGAEAMMIMDQRVLTTSAVRCIGNTLLLQGRTY 176
Query 194 SPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHF 253
SPP+ I AIGD A M AAL A P V L QYV ++ LGY ++++ Y P+RM
Sbjct 177 SPPFVITAIGDEAKMSAALDAEPGVRLLLQYVDKYKLGYEVTALDEVELPAYDGPIRMKA 236
Query 254 AQPAG 258
A AG
Sbjct 237 ATEAG 241
>gi|309811408|ref|ZP_07705195.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
gi|308434715|gb|EFP58560.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
Length=292
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/246 (42%), Positives = 144/246 (59%), Gaps = 15/246 (6%)
Query 19 RRRS--AWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATE 76
RRR AW+ +VP+V L+AG + + + GT++R SD L D+VRRA R+ T+
Sbjct 48 RRRGSLAWKAAVPIVLLVAGAMFGVSSRAANGTDLR-SDTTNLADVVRRAD---QRVKTK 103
Query 77 REALTTRIDSVHGRSV-----DTALA---AMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQ 128
+E + T V + D+ A A+ +++ K A + P+ G + VTL D++
Sbjct 104 QEDVATLRADVEAAQLAAAKKDSGAARALALTKQADKAQDPAGLAPLSGQAISVTLDDSK 163
Query 129 RDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLL 188
+ P+D SPD LVVHQQD++AV+NALW GA IQ+ DQRI++ S RCVGNTL+L
Sbjct 164 KKVE-ELPKDGSPDWLVVHQQDVQAVVNALWEGGARGIQLIDQRIVSTSAVRCVGNTLIL 222
Query 189 NGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADP 248
GR YSPP+TI A+GD +QAAL A V +YKQYV GLGY + + + +
Sbjct 223 QGRVYSPPFTITAVGDPVKLQAALEADESVKIYKQYVDLVGLGYNVKAIQNTTLPAFTGS 282
Query 249 VRMHFA 254
V M A
Sbjct 283 VTMKHA 288
>gi|284988661|ref|YP_003407215.1| hypothetical protein Gobs_0033 [Geodermatophilus obscurus DSM
43160]
gi|284061906|gb|ADB72844.1| protein of unknown function DUF881 [Geodermatophilus obscurus
DSM 43160]
Length=255
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/248 (42%), Positives = 146/248 (59%), Gaps = 16/248 (6%)
Query 19 RRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLV-------DLVRRAQASVN 71
R +AW VP+V L AGLL A + + GT++R +A L D+V + +
Sbjct 13 RGGAAWAALVPVVALAAGLLFATSSQTAQGTDLRGGEATELSALIPARGDVVAAQEDQLT 72
Query 72 RLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGV--AAMNPVHGPGLVVTLQDAQR 129
L + +ALT D R+ D A A R A AG A + + GPG+ +TL DA R
Sbjct 73 ALQAQVQALT---DQAASRNGDVAAA----RDAGQAGALSAGLVALTGPGVEITLDDAPR 125
Query 130 DANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLN 189
+G P A PDD+V+HQ D++AV+NA+W +GA+A+ + DQR+IA S RCVGN LLL
Sbjct 126 RPDGSLPIGARPDDVVIHQSDVQAVVNAVWASGADAVAIMDQRLIATSAVRCVGNVLLLQ 185
Query 190 GRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPV 249
GRTYSPP+ + AIGDA A++A LAA+P V +++Q V +GLG+ E ++ + Y P
Sbjct 186 GRTYSPPFVVTAIGDAGAIRAQLAASPQVQVFRQAVEDYGLGFAVEDRAEITLPAYDSPP 245
Query 250 RMHFAQPA 257
M +A A
Sbjct 246 AMEYATAA 253
>gi|117927226|ref|YP_871777.1| hypothetical protein Acel_0015 [Acidothermus cellulolyticus 11B]
gi|117647689|gb|ABK51791.1| protein of unknown function DUF881 [Acidothermus cellulolyticus
11B]
Length=263
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/229 (46%), Positives = 133/229 (59%), Gaps = 3/229 (1%)
Query 19 RRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATERE 78
RR + WR VP+V LAGLL A + + G ++R L DLV R Q +VN +
Sbjct 2 RRTTGWRVGVPVVAALAGLLFATSATTAHGADLRVIGRSDLADLVARMQRTVNGETKKLA 61
Query 79 ALTTRIDSVHGRSVDTALAAMQRRSA--KLAGVAAMNPVHGPGLVVTLQDAQRDANGRFP 136
AL R+ + ++ T Q R+A +LAG + P GPGL+VTL DA G
Sbjct 62 ALQQRVRDLTDQAARTDGRVAQLRTAADELAGSVGLRPETGPGLIVTLDDAP-PLRGAAA 120
Query 137 RDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPP 196
PD LVVHQQDI+AV+NALW GA AI +Q +R++A S RCVGNTLLL G YSPP
Sbjct 121 NAVPPDYLVVHQQDIQAVVNALWAGGARAISLQGKRLVATSAVRCVGNTLLLEGVVYSPP 180
Query 197 YTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGY 245
Y IAA+GD ++AAL A P VT+Y+QYV + LGY L + Y
Sbjct 181 YVIAAVGDPDRLRAALDADPNVTIYRQYVAAYHLGYQVRTAQHLTVPAY 229
>gi|337767088|emb|CCB75799.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=254
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/232 (44%), Positives = 138/232 (60%), Gaps = 6/232 (2%)
Query 31 VCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVRRAQASVNRLATEREALTTRIDSV-H 88
V AGLL A++ + GT IR ++ R DL+R +L E L TR D++ H
Sbjct 25 VFAAAGLLFWASYDTAHGTNIRSDESLLRTSDLIRAKSHKNAQLEEELADLRTRADALAH 84
Query 89 GRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPR--DASPDDLVV 146
S + + +RR LA A + PV G L VTL DA A R P P+DLV+
Sbjct 85 AESGEGS--GPRRRDDALAEAAGVRPVTGDALAVTLNDAPPGATARVPGVPQPQPNDLVI 142
Query 147 HQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAA 206
HQQD++AV+NALW GA A+Q+ DQR+I+ S RCVGNTL+L GR YSPPYTI A+GD
Sbjct 143 HQQDLQAVVNALWRGGARAVQVMDQRLISTSAVRCVGNTLILQGRVYSPPYTITAVGDPD 202
Query 207 AMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAG 258
A++ A+ P +T YKQYV +GLG+ + + + GY+ V +H+AQP G
Sbjct 203 ALRHAVDQDPSITNYKQYVTAYGLGWKVDPLHHVTLPGYSGTVDLHYAQPLG 254
>gi|297158808|gb|ADI08520.1| hypothetical protein SBI_05400 [Streptomyces bingchenggensis
BCW-1]
Length=255
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/229 (42%), Positives = 136/229 (60%), Gaps = 4/229 (1%)
Query 31 VCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVRRAQASVNRLATEREALTTRIDSVHG 89
V LAGL+ + + GT +R ++ RL DL++ L L +R+D++
Sbjct 27 VFALAGLIFWTSFDTAQGTNLRSDESMLRLSDLIQERSRKNAGLDDSTAQLRSRVDAL-A 85
Query 90 RSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPR--DASPDDLVVH 147
R + A A +RR A L A + G GL VTL DA +A + P + P+DLV+H
Sbjct 86 RRDNGATDAERRRLAALERDAGTQKLTGTGLSVTLTDAPPNATAKIPGVPEPQPNDLVIH 145
Query 148 QQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAA 207
QQD++AV+NALW GA I++ DQR+I+ S RCVGNTL+L GR YSPPYTI A+GD
Sbjct 146 QQDLQAVVNALWQGGARGIKVMDQRLISTSAVRCVGNTLILQGRVYSPPYTITAVGDRGK 205
Query 208 MQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQP 256
++ ALAA+P + Y+ YV +GLG+ H + + GY+ V +H+AQP
Sbjct 206 LRTALAASPAIENYRSYVEAYGLGWKVAQHDRVTLPGYSGTVDLHYAQP 254
>gi|256389274|ref|YP_003110838.1| hypothetical protein Caci_0042 [Catenulispora acidiphila DSM
44928]
gi|256355500|gb|ACU68997.1| protein of unknown function DUF881 [Catenulispora acidiphila
DSM 44928]
Length=270
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/252 (43%), Positives = 140/252 (56%), Gaps = 7/252 (2%)
Query 8 PCPENGETMIDRRRSAWRFSVPLVCLLAG-LLLAATHGVSGGTEIRRSDAPRLVDLVRRA 66
P P G R R AW V LV LAG L L A G +IR +L D++R A
Sbjct 17 PEPAGGPAPRPRSRVAWHTGVVLVFALAGALFLTARDTADGQGDIRPDRGAQLSDVIR-A 75
Query 67 QASVNRLATEREALTTRIDS---VHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVT 123
Q + N+ TE+ A R D G+S D + A+Q + LA A+ PV G L VT
Sbjct 76 QNTHNQQLTEQVA-GQRADQDALTRGQSADARVKAVQDQVDALAAPVALTPVSGSALAVT 134
Query 124 LQDAQRDAN-GRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCV 182
L DA +A A PD L++HQQD++AV+NALW GA IQ+ DQR+ S RCV
Sbjct 135 LNDAPPNAQPAAGAPTAQPDWLIIHQQDVQAVVNALWAGGATGIQLMDQRLAPTSAVRCV 194
Query 183 GNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQI 242
GNTLLL GR YSPPY I A+GD A ++++L AAP V Y +YV +GLG+ + + +
Sbjct 195 GNTLLLQGRVYSPPYVITAVGDTAKLRSSLLAAPAVQTYLEYVSAYGLGWDVKARDRVTL 254
Query 243 VGYADPVRMHFA 254
GY P+ + FA
Sbjct 255 PGYTGPLDVSFA 266
>gi|345007982|ref|YP_004810336.1| hypothetical protein Strvi_0268 [Streptomyces violaceusniger
Tu 4113]
gi|344034331|gb|AEM80056.1| protein of unknown function DUF881 [Streptomyces violaceusniger
Tu 4113]
Length=256
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/231 (39%), Positives = 136/231 (59%), Gaps = 4/231 (1%)
Query 31 VCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVRRAQASVNRLATEREALTTRIDSVHG 89
V LAG++ + + GT IR ++ RL DL++ L + + +D++
Sbjct 27 VFALAGVIFWTSFNTAQGTNIRSDESMLRLSDLIQERSRKNGTLGDSTGKIRSEVDAL-A 85
Query 90 RSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPR--DASPDDLVVH 147
R + + A +R+ A+L A + G GL VTL DA +A + P D P+DLV+H
Sbjct 86 RRDNGSTQAERRKLAELEKTAGTRKLSGAGLTVTLTDAPPNATPQIPGVPDPQPNDLVIH 145
Query 148 QQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAA 207
QQD++AV+NALW GA+ I++ DQR+I+ S RCVGNTL+L G+ YSPPY + A+GD
Sbjct 146 QQDLQAVVNALWQGGAKGIKVMDQRLISTSAVRCVGNTLILQGQVYSPPYKVTAVGDRGK 205
Query 208 MQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAG 258
+ AAL A+P + Y+ YV +GLG+ + H + + GY+ V +H AQP G
Sbjct 206 LSAALTASPTIQNYRSYVDAYGLGWKVDQHDKVTLPGYSGTVDLHQAQPIG 256
>gi|291452619|ref|ZP_06592009.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355568|gb|EFE82470.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=260
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/246 (40%), Positives = 137/246 (56%), Gaps = 7/246 (2%)
Query 18 DRRRSAWRFSVPL---VCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVRRAQASVNRL 73
DR R WR L V LAGL+ + + GT IR A +L DL+R L
Sbjct 15 DRGRFRWRPVRLLTVGVFALAGLIFVTSFNTARGTNIRTDTALLKLSDLIRDRSHKNGEL 74
Query 74 ATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANG 133
AL +++++ R D + A + L A P+ GP + VTL DA DA
Sbjct 75 DEANSALRKKVEALAERD-DGSTEAEDAKLGALEKSAGTKPISGPSVSVTLDDAPPDATA 133
Query 134 RFPR--DASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGR 191
+ P + P+DLV+HQQD++AV+NALW GA+ I++ QR+I+ S RCVGNTL+L GR
Sbjct 134 KLPGYPEPHPNDLVIHQQDLQAVVNALWKGGAKGIEVMGQRLISTSAVRCVGNTLILQGR 193
Query 192 TYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRM 251
YSPPY + A+GD ++ ALA +P + Y YV +GLG+ E ++ GY+ V +
Sbjct 194 VYSPPYNVTAVGDQEKLKQALAESPEIQNYMLYVNAYGLGWKVEDAGKTKLDGYSGTVDL 253
Query 252 HFAQPA 257
H+A+PA
Sbjct 254 HYAKPA 259
>gi|294630364|ref|ZP_06708924.1| membrane spanning protein DUF881 [Streptomyces sp. e14]
gi|292833697|gb|EFF92046.1| membrane spanning protein DUF881 [Streptomyces sp. e14]
Length=265
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/243 (40%), Positives = 134/243 (56%), Gaps = 4/243 (1%)
Query 19 RRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVRRAQASVNRLATER 77
RR R V LAGL+ + + GT IR + +L DL++ L
Sbjct 24 RRFPPVRILTVAVFALAGLIFFTSFDTAKGTNIRTDTSLLKLSDLIQERSRKNKELDESN 83
Query 78 EALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPR 137
AL ++++ S D + A RR + L A PV G + VTL DA DA + P
Sbjct 84 AALRDDVEAL-AESDDGSSGAQDRRLSGLEKAAGTQPVKGEAVTVTLNDAPPDATAKLPG 142
Query 138 --DASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSP 195
+ PD LV+HQQD++AV+NALWN GA+ I++ DQR+I+ S RCVGNTL+L GR YSP
Sbjct 143 YPEPQPDYLVIHQQDLQAVVNALWNGGAQGIKVMDQRLISTSAVRCVGNTLILQGRVYSP 202
Query 196 PYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQ 255
PY I A+GD ++ ALA +P + Y YV +GLG+ + + GY+ V +H+AQ
Sbjct 203 PYKITAVGDPDRLKKALADSPAIQNYMVYVNVYGLGWKVTEDGAVTLPGYSGTVDLHYAQ 262
Query 256 PAG 258
P G
Sbjct 263 PVG 265
>gi|84497158|ref|ZP_00995980.1| hypothetical protein JNB_13228 [Janibacter sp. HTCC2649]
gi|84382046|gb|EAP97928.1| hypothetical protein JNB_13228 [Janibacter sp. HTCC2649]
Length=249
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/239 (39%), Positives = 135/239 (57%), Gaps = 4/239 (1%)
Query 13 GETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNR 72
G+ + R W VP+V ++AG+L A + + G +R SDA L D++R R
Sbjct 4 GKAFLTTRPGPWSVLVPIVAVIAGILFATSGTAAQGRSLR-SDAAGLPDIIREKTQDNAR 62
Query 73 LATEREALTTRIDSV--HGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRD 130
+ + + LT +D + G + A+ ++R++ L A V GP + V L D++
Sbjct 63 MTGDLQKLTNEVDQLTHDGAPGNAAVEGLERKADALGVSAGRTAVQGPVVEVQLDDSKLP 122
Query 131 ANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNG 190
+ R P + D +VVHQQD++AV+NA W GAEA+ +QDQRIIA S RCVGNTL+L G
Sbjct 123 TD-RIPENLGVDSVVVHQQDVQAVVNAFWAGGAEAMMIQDQRIIATSAVRCVGNTLILQG 181
Query 191 RTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPV 249
R YSPPY I AIGD A ++ L +P + +Y++YV GLGY H + YA +
Sbjct 182 RVYSPPYRIRAIGDPARLRDILNQSPEIQIYQEYVKAVGLGYEVTTHERQEFPAYAGSI 240
>gi|302552714|ref|ZP_07305056.1| membrane spanning protein DUF881 [Streptomyces viridochromogenes
DSM 40736]
gi|302470332|gb|EFL33425.1| membrane spanning protein DUF881 [Streptomyces viridochromogenes
DSM 40736]
Length=260
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/248 (41%), Positives = 140/248 (57%), Gaps = 18/248 (7%)
Query 19 RRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVR---RAQASVNR-- 72
RR R V LAGL+ + + GT IR + +L DL+ R +++
Sbjct 18 RRFRPVRILTAAVFALAGLIFFTSFDTAKGTNIRTDTSLLKLSDLIHERSRGNGALDETN 77
Query 73 --LATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRD 130
L E EAL R D ++ D LAA+++R A + G GL VTL DA D
Sbjct 78 GTLRKEIEALAERDDG-STKAEDEKLAALEKR-------AGTQRLSGKGLTVTLNDAPPD 129
Query 131 ANGRFPR--DASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLL 188
A + P + PD LV+HQQD++AV+NALW GA+ I++ DQR+I+ S RCVGNTL+L
Sbjct 130 ATAKLPGYPEPQPDYLVIHQQDLQAVVNALWQGGAKGIKVMDQRLISTSAVRCVGNTLIL 189
Query 189 NGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADP 248
GR YSPPY I A+GD +Q ALAA+P + Y YV +GLG+ E + + + GY+
Sbjct 190 QGRVYSPPYKITAVGDTDKLQKALAASPAIQNYMVYVNVYGLGWKVEENGPVTLPGYSGT 249
Query 249 VRMHFAQP 256
V +H+A+P
Sbjct 250 VDLHYAKP 257
>gi|329938620|ref|ZP_08288016.1| hypothetical protein SGM_3508 [Streptomyces griseoaurantiacus
M045]
gi|329302111|gb|EGG46003.1| hypothetical protein SGM_3508 [Streptomyces griseoaurantiacus
M045]
Length=281
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/230 (41%), Positives = 130/230 (57%), Gaps = 5/230 (2%)
Query 31 VCLLAGLLLAATHGVSGGTEIRRSDAP--RLVDLVRRAQASVNRLATEREALTTRIDSVH 88
V LAGLL + + GT IR +DA +L DL++ RL +L ++S+
Sbjct 51 VFALAGLLFFTSFNTAKGTNIR-TDASLLKLSDLIQERSQKNGRLDESNGSLREDVESLA 109
Query 89 GRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPR--DASPDDLVV 146
R+ A R + L A P+ G + VTL DA DA + P + PD LV+
Sbjct 110 KRTAGGDSGADAARLSALEKNAGTRPLKGGAVTVTLDDAPPDATAKLPGYPEPQPDYLVI 169
Query 147 HQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAA 206
HQQD++AV+NALW GA I++ DQR+I S RCVGNTL+L GR YSPPY I A+GD
Sbjct 170 HQQDLQAVVNALWKGGARGIKVMDQRLIGTSAVRCVGNTLILQGRVYSPPYKITAVGDPE 229
Query 207 AMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQP 256
+Q+ALAA+P + Y YV +GLG+ ++ + GY V +H+A+P
Sbjct 230 KLQSALAASPAIQNYMVYVNVYGLGWKVTEDGNVTLPGYTGTVDLHYAEP 279
>gi|152963998|ref|YP_001359782.1| hypothetical protein Krad_0026 [Kineococcus radiotolerans SRS30216]
gi|151358515|gb|ABS01518.1| protein of unknown function DUF881 [Kineococcus radiotolerans
SRS30216]
Length=249
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/227 (46%), Positives = 137/227 (61%), Gaps = 14/227 (6%)
Query 25 RFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQ------ASVNRLATERE 78
R +V V +LAGLL A + S G+++R +A + +R++ A V+ L E E
Sbjct 17 RLAVAAVFVLAGLLFATSAQTSRGSDLRSENADLGSLVAQRSRDNEQRSAQVSALRGEVE 76
Query 79 ALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRD 138
AL+ R VD L R A L + V GPG+ VTL DA D P
Sbjct 77 ALS-RAAGTGSAVVDDPL-----RDAALGTASGALAVTGPGVTVTLDDAPIDRP--RPAG 128
Query 139 ASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYT 198
A+PDDLVVHQQD+EAV+NALW AGAEA+ + DQRI++ S RCVGN L+L GRTYSPPY
Sbjct 129 AAPDDLVVHQQDVEAVVNALWAAGAEAMVIMDQRIVSTSAVRCVGNVLVLQGRTYSPPYR 188
Query 199 IAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGY 245
I+A+GD A++A LAA+ V++Y+QYV +GLGY DLQ+ +
Sbjct 189 ISAVGDVDALRAGLAASAAVSVYRQYVSAYGLGYDVSEADDLQLPAF 235
>gi|302535553|ref|ZP_07287895.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302444448|gb|EFL16264.1| conserved hypothetical protein [Streptomyces sp. C]
Length=258
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/252 (41%), Positives = 144/252 (58%), Gaps = 10/252 (3%)
Query 11 ENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAP--RLVDLVRRAQA 68
++ T RR R V LAGL+ + S GT IR +DA +L DL+ A
Sbjct 5 DDSSTGARRRARPVRLLTAAVFALAGLIFVTSFNTSKGTNIR-TDASLLKLSDLIHERSA 63
Query 69 SVNRLATEREALTTR--IDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQD 126
L E+ A T R +D++ R + + A + + A L + + G GL VTL D
Sbjct 64 KNAEL--EKTAATARDQVDALAERD-NGSTKAEEAKLAALRTASGTEELTGRGLTVTLND 120
Query 127 AQRDANGRFPR--DASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGN 184
A +A R P + P+DLV+HQQD++AV+NALW GAE I++ QR+IA S RCVGN
Sbjct 121 APPNATARVPGVPEPQPNDLVIHQQDLQAVVNALWLGGAEGIEVMGQRLIATSAVRCVGN 180
Query 185 TLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVG 244
TL+L GR YSPPY ++A+GD AA++ A+ A+P + Y YV +GLG+ E L + G
Sbjct 181 TLILQGRVYSPPYKVSAVGDPAALRKAVNASPAIQNYLLYVNAYGLGWKVEEDKRLTLPG 240
Query 245 YADPVRMHFAQP 256
Y+ V +H+A+P
Sbjct 241 YSGTVDLHYAKP 252
>gi|297193263|ref|ZP_06910661.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151712|gb|EFH31319.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=255
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/245 (39%), Positives = 139/245 (57%), Gaps = 8/245 (3%)
Query 20 RRSAWR---FSVPLVCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVRRAQASVNRLAT 75
RRS WR V LAGL+ + + GT++R D+ RL DL+++ L
Sbjct 13 RRSTWRPVRLLTAAVFALAGLIFVTSFNTAKGTDLRTDDSLLRLSDLIKQRSEKNGDLEE 72
Query 76 EREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGR- 134
A+ +D++ R D + A + A L A P+ G L VTL DA DA
Sbjct 73 STSAVRGDVDALAQRD-DGSTEAEDAKLAALEKAAGTEPLKGSALTVTLDDAPPDARAAP 131
Query 135 -FPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTY 193
+P + +DLV+HQQD++AV+N LW GA+ I++ DQR+I+ S RCVGNTL+L GR Y
Sbjct 132 GYP-EPQANDLVIHQQDLQAVVNTLWQGGAKGIRVMDQRLISTSAVRCVGNTLILQGRVY 190
Query 194 SPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHF 253
SPPY I A+GD ++ ALA +P + Y+ YV +GLG+ + + + + GY+ V +H+
Sbjct 191 SPPYKITAVGDQDVLKKALADSPAIQNYQLYVEAYGLGWKVDENETVTLPGYSGTVDLHY 250
Query 254 AQPAG 258
A+P G
Sbjct 251 AKPVG 255
>gi|294813769|ref|ZP_06772412.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294326368|gb|EFG08011.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
Length=256
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/245 (40%), Positives = 136/245 (56%), Gaps = 9/245 (3%)
Query 20 RRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAP-RLVDLVRRAQASVNRLATERE 78
+R A R V +AGL+ + + GT++R D+ +L DL+R L
Sbjct 16 KRRAGRVLTAAVFAVAGLIFVTSFNTARGTDLRTDDSLLKLSDLIRERSGRNGDLERSTG 75
Query 79 ALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGR---- 134
AL +DS+ R D + A R L A +PV GPGL VTL DA AN R
Sbjct 76 ALRDEVDSLADRD-DGSTRAEDARLGALERTAGTSPVRGPGLTVTLDDAP--ANARATPG 132
Query 135 FPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYS 194
+P + +DLV+HQQD++AV+NALW GA +Q+ DQR+I+ S RCVGNTL+L GR YS
Sbjct 133 YP-EPQANDLVIHQQDLQAVVNALWAGGARGVQVMDQRLISTSAVRCVGNTLILQGRVYS 191
Query 195 PPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFA 254
PPY I A+GD ++ AL + + Y+ YV +GLG+ + + + GY+ V +H A
Sbjct 192 PPYKITAVGDRDRLEQALERSSAIQNYRLYVKAYGLGWKVDERGAVTLPGYSGTVDLHHA 251
Query 255 QPAGP 259
+P P
Sbjct 252 KPLNP 256
>gi|317123237|ref|YP_004097349.1| hypothetical protein Intca_0060 [Intrasporangium calvum DSM 43043]
gi|315587325|gb|ADU46622.1| protein of unknown function DUF881 [Intrasporangium calvum DSM
43043]
Length=271
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/258 (40%), Positives = 145/258 (57%), Gaps = 12/258 (4%)
Query 5 HPTPCPENGET-MIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRS-DAPRLV-- 60
+P P ++ + DR R WRF VP+V AGL+ A + + G ++R D P L+
Sbjct 18 NPVPSADDAQQPGGDRPRLGWRFLVPIVTAGAGLMFAMSFQAAQGDDLRADRDLPSLIIE 77
Query 61 -DLVRRAQAS-VNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGP 118
+ A+A ++ L E EAL S D+ L A+ R S K A AA + GP
Sbjct 78 GNGRNEAKAKELDLLQQEVEAL-----SKERGPKDSRLEALNRESTKTAAAAAATALKGP 132
Query 119 GLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSI 178
+ V L D+ + + P + DD+VVHQQD++AV+NALW++GAEA+ +QDQR+I+ S
Sbjct 133 SVEVVLDDSSLSLD-QLPSRYTADDIVVHQQDVQAVVNALWSSGAEAMMIQDQRVISTSA 191
Query 179 ARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHP 238
RCVGNTL+L GR Y+PPY I AIGD +M L A P ++ Y YV GLG+ H
Sbjct 192 VRCVGNTLILQGRVYAPPYRIEAIGDVDSMLQGLDADPTISTYLDYVQAVGLGWAVHTHA 251
Query 239 DLQIVGYADPVRMHFAQP 256
+ ++ Y+ V + A P
Sbjct 252 EAELPAYSGSVDLDHATP 269
Lambda K H
0.322 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 391676602750
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40