BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0016c
Length=491
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607158|ref|NP_214530.1| penicillin-binding protein PbpA [My... 990 0.0
gi|339630099|ref|YP_004721741.1| penicillin-binding protein PbpA... 989 0.0
gi|306778838|ref|ZP_07417175.1| penicillin-binding protein pbpA ... 989 0.0
gi|289748478|ref|ZP_06507856.1| penicillin-binding protein pbpA ... 971 0.0
gi|291463677|pdb|3LO7|A Chain A, Crystal Structure Of Pbpa From ... 923 0.0
gi|183980053|ref|YP_001848344.1| penicillin-binding protein PbpA... 903 0.0
gi|240172385|ref|ZP_04751044.1| penicillin-binding protein PbpA ... 897 0.0
gi|118615937|ref|YP_904269.1| penicillin-binding protein PbpA [M... 895 0.0
gi|41406117|ref|NP_958953.1| PbpA [Mycobacterium avium subsp. pa... 872 0.0
gi|296167114|ref|ZP_06849524.1| penicillin binding protein trans... 872 0.0
gi|254773071|ref|ZP_05214587.1| PbpA protein [Mycobacterium aviu... 870 0.0
gi|336462093|gb|EGO40935.1| cell division protein FtsI/penicilli... 869 0.0
gi|254819102|ref|ZP_05224103.1| PbpA protein [Mycobacterium intr... 865 0.0
gi|342860263|ref|ZP_08716915.1| PbpA protein [Mycobacterium colo... 861 0.0
gi|15826881|ref|NP_301144.1| penicillin-binding protein [Mycobac... 849 0.0
gi|167968146|ref|ZP_02550423.1| penicillin-binding protein pbpA ... 823 0.0
gi|118469030|ref|YP_884451.1| penicillin binding protein transpe... 797 0.0
gi|108796998|ref|YP_637195.1| peptidoglycan glycosyltransferase ... 786 0.0
gi|145221404|ref|YP_001132082.1| penicillin-binding protein, tra... 784 0.0
gi|2344823|emb|CAA94720.1| PbpA [Mycobacterium leprae] 779 0.0
gi|120401053|ref|YP_950882.1| penicillin-binding transpeptidase ... 771 0.0
gi|333988657|ref|YP_004521271.1| penicillin-binding protein PbpA... 753 0.0
gi|289552266|ref|ZP_06441476.1| penicillin-binding protein pbpA ... 692 0.0
gi|169627142|ref|YP_001700791.1| penicillin-binding protein PbpA... 667 0.0
gi|226303519|ref|YP_002763477.1| penicillin-binding protein PbpA... 612 5e-173
gi|229492077|ref|ZP_04385888.1| peptidoglycan glycosyltransferas... 612 6e-173
gi|312137538|ref|YP_004004874.1| penicillin-binding protein [Rho... 606 3e-171
gi|325677496|ref|ZP_08157160.1| penicillin binding protein trans... 603 2e-170
gi|298527414|ref|ZP_07014823.1| penicillin-binding protein [Myco... 598 7e-169
gi|226362925|ref|YP_002780705.1| penicillin-binding protein PbpA... 586 3e-165
gi|111020685|ref|YP_703657.1| peptidoglycan glycosyltransferase ... 585 5e-165
gi|333917712|ref|YP_004491293.1| Penicillin binding protein tran... 579 5e-163
gi|54022046|ref|YP_116288.1| putative penicillin-binding protein... 555 9e-156
gi|331694007|ref|YP_004330246.1| peptidoglycan glycosyltransfera... 545 1e-152
gi|296137779|ref|YP_003645022.1| penicillin-binding protein tran... 520 2e-145
gi|343928763|ref|ZP_08768208.1| penicillin-binding protein PbpA ... 493 4e-137
gi|262200071|ref|YP_003271279.1| penicillin-binding protein tran... 482 5e-134
gi|302531408|ref|ZP_07283750.1| penicillin-binding protein 2 [St... 478 1e-132
gi|300781988|ref|YP_003762279.1| peptidoglycan glycosyl transfer... 471 9e-131
gi|325000092|ref|ZP_08121204.1| penicillin-binding protein [Pseu... 471 1e-130
gi|257054123|ref|YP_003131955.1| cell elongation-specific peptid... 464 1e-128
gi|326383935|ref|ZP_08205619.1| penicillin-binding protein trans... 456 3e-126
gi|134096664|ref|YP_001102325.1| peptidoglycan glycosyltransfera... 452 5e-125
gi|258650348|ref|YP_003199504.1| peptidoglycan glycosyltransfera... 451 2e-124
gi|158312001|ref|YP_001504509.1| peptidoglycan glycosyltransfera... 439 7e-121
gi|296392807|ref|YP_003657691.1| penicillin-binding protein tran... 419 5e-115
gi|334564968|ref|ZP_08517959.1| putative penicillin-binding prot... 419 8e-115
gi|340793020|ref|YP_004758483.1| penicillin-binding protein [Cor... 415 1e-113
gi|256374183|ref|YP_003097843.1| peptidoglycan glycosyltransfera... 413 3e-113
gi|317507737|ref|ZP_07965442.1| penicillin binding protein trans... 413 4e-113
>gi|15607158|ref|NP_214530.1| penicillin-binding protein PbpA [Mycobacterium tuberculosis H37Rv]
gi|15839390|ref|NP_334427.1| penicillin-binding protein, putative [Mycobacterium tuberculosis
CDC1551]
gi|31791193|ref|NP_853686.1| penicillin-binding protein PbpA [Mycobacterium bovis AF2122/97]
63 more sequence titles
Length=491
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/491 (100%), Positives = 491/491 (100%), Gaps = 0/491 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL
Sbjct 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET
Sbjct 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS
Sbjct 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG
Sbjct 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ
Sbjct 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
Query 481 AVIEAALQGEP 491
AVIEAALQGEP
Sbjct 481 AVIEAALQGEP 491
>gi|339630099|ref|YP_004721741.1| penicillin-binding protein PbpA [Mycobacterium africanum GM041182]
gi|339329455|emb|CCC25090.1| putative penicillin-binding protein PbpA [Mycobacterium africanum
GM041182]
Length=491
Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/491 (99%), Positives = 491/491 (100%), Gaps = 0/491 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL
Sbjct 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET
Sbjct 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS
Sbjct 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
MARAFGLDSPPRPTPL+VAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG
Sbjct 301 MARAFGLDSPPRPTPLKVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ
Sbjct 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
Query 481 AVIEAALQGEP 491
AVIEAALQGEP
Sbjct 481 AVIEAALQGEP 491
>gi|306778838|ref|ZP_07417175.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis SUMu002]
gi|306786993|ref|ZP_07425315.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis SUMu004]
gi|306791551|ref|ZP_07429853.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis SUMu005]
gi|308328171|gb|EFP17022.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis SUMu002]
gi|308336287|gb|EFP25138.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis SUMu004]
gi|308339891|gb|EFP28742.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis SUMu005]
Length=491
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/491 (99%), Positives = 491/491 (100%), Gaps = 0/491 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL
Sbjct 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET
Sbjct 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS
Sbjct 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG
Sbjct 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ
Sbjct 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPRHTPPHAWYIAFAPA+APKVAVAVLVENGADRLSATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAEAPKVAVAVLVENGADRLSATGGALAAPIGR 480
Query 481 AVIEAALQGEP 491
AVIEAALQGEP
Sbjct 481 AVIEAALQGEP 491
>gi|289748478|ref|ZP_06507856.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis T92]
gi|289689065|gb|EFD56494.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis T92]
gi|339296744|gb|AEJ48854.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis CCDC5180]
Length=482
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/482 (99%), Positives = 482/482 (100%), Gaps = 0/482 (0%)
Query 10 VTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATD 69
+TVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATD
Sbjct 1 MTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATD 60
Query 70 GRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDP 129
GRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDP
Sbjct 61 GRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDP 120
Query 130 RGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASH 189
RGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASH
Sbjct 121 RGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASH 180
Query 190 NPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTI 249
NPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTI
Sbjct 181 NPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTI 240
Query 250 PLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDS 309
PLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDS
Sbjct 241 PLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDS 300
Query 310 PPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVG 369
PPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVG
Sbjct 301 PPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVG 360
Query 370 SLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAE 429
SLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAE
Sbjct 361 SLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAE 420
Query 430 HGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQG 489
HGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQG
Sbjct 421 HGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQG 480
Query 490 EP 491
EP
Sbjct 481 EP 482
>gi|291463677|pdb|3LO7|A Chain A, Crystal Structure Of Pbpa From Mycobacterium Tuberculosis
gi|291463678|pdb|3LO7|B Chain B, Crystal Structure Of Pbpa From Mycobacterium Tuberculosis
Length=483
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/457 (100%), Positives = 457/457 (100%), Gaps = 0/457 (0%)
Query 35 RADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLR 94
RADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLR
Sbjct 27 RADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLR 86
Query 95 YSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGC 154
YSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGC
Sbjct 87 YSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGC 146
Query 155 YGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAI 214
YGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAI
Sbjct 147 YGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAI 206
Query 215 SETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSL 274
SETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSL
Sbjct 207 SETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSL 266
Query 275 REAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGM 334
REAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGM
Sbjct 267 REAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGM 326
Query 335 TSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQ 394
TSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQ
Sbjct 327 TSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQ 386
Query 395 VAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKV 454
VAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKV
Sbjct 387 VAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKV 446
Query 455 AVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP 491
AVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP
Sbjct 447 AVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP 483
>gi|183980053|ref|YP_001848344.1| penicillin-binding protein PbpA [Mycobacterium marinum M]
gi|183173379|gb|ACC38489.1| penicillin-binding protein PbpA [Mycobacterium marinum M]
Length=491
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/491 (92%), Positives = 463/491 (95%), Gaps = 0/491 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNPEVYAPVTGFYSLRYSST LERAEDP+LNGSD+RLFGRRL
Sbjct 61 LLAYSVATDSRFRFLRVYPNPEVYAPVTGFYSLRYSSTGLERAEDPLLNGSDQRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGC GPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCGGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASH+PE QA+AW+ L D+P+SPLTNRAISETYPPGSTFKVITTAAAL AGATE
Sbjct 181 YDPNLLASHDPEAQAEAWKDLRDDPSSPLTNRAISETYPPGSTFKVITTAAALQAGATEN 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
+QLTAA IPLP STA LENYGGAPC TVSLREAF KSCNTAFVQLGI TGA ALRS
Sbjct 241 DQLTAAANIPLPDSTATLENYGGAPCDSGQTVSLREAFAKSCNTAFVQLGISTGAAALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
MA AFGLD+PP PLQVAESTVGPIPD+AALGM+SIGQKDVALTPL NA+IAATIANGG
Sbjct 301 MAHAFGLDTPPSAIPLQVAESTVGPIPDAAALGMSSIGQKDVALTPLQNAQIAATIANGG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
+ MRPYLV SLKGPDLANISTT +QQRRAVSPQVAAKLTELMVGAE+VAQQKGAIPGVQ
Sbjct 361 VVMRPYLVDSLKGPDLANISTTTPHQQRRAVSPQVAAKLTELMVGAEQVAQQKGAIPGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
Query 481 AVIEAALQGEP 491
AVIEAALQGEP
Sbjct 481 AVIEAALQGEP 491
>gi|240172385|ref|ZP_04751044.1| penicillin-binding protein PbpA [Mycobacterium kansasii ATCC
12478]
Length=491
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/491 (91%), Positives = 460/491 (94%), Gaps = 0/491 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNPEVYAPVTGFYSLRYSST LERAEDP+LNGSD RLFGRRL
Sbjct 61 LLAYSVATDSRFRFLRVYPNPEVYAPVTGFYSLRYSSTGLERAEDPLLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTINPR+QQAGWDAMQQGC GPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTTINPRVQQAGWDAMQQGCGGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASH+PEVQAQAWQRL DNP SPLTNRAI+ETYPPGSTFKVITTAAAL AGAT+T
Sbjct 181 YDPNLLASHDPEVQAQAWQRLRDNPDSPLTNRAIAETYPPGSTFKVITTAAALQAGATDT 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
EQLTAA IPLPGSTA LENYGG CG EPTVSL AF KSCNTAFVQLG+ TGA ALRS
Sbjct 241 EQLTAAAEIPLPGSTATLENYGGTTCGAEPTVSLSVAFAKSCNTAFVQLGMLTGAAALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A+AFGLD+ P P PLQVAEST+GPI D+AALGMTSIGQKDVALTPL NAE+AATIANGG
Sbjct 301 TAQAFGLDTSPDPIPLQVAESTIGPIADTAALGMTSIGQKDVALTPLQNAEVAATIANGG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
ITMRPYLV +L+GPDLANISTT YQQRRAVSPQVAAKLTELMVGAEKV QQKGAIPGVQ
Sbjct 361 ITMRPYLVDNLRGPDLANISTTAPYQQRRAVSPQVAAKLTELMVGAEKVTQQKGAIPGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAP+VA+AV VENG DRLSATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPRVAIAVFVENGGDRLSATGGALAAPIGR 480
Query 481 AVIEAALQGEP 491
AVIEAALQG P
Sbjct 481 AVIEAALQGGP 491
>gi|118615937|ref|YP_904269.1| penicillin-binding protein PbpA [Mycobacterium ulcerans Agy99]
gi|118568047|gb|ABL02798.1| penicillin-binding protein PbpA [Mycobacterium ulcerans Agy99]
Length=491
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/491 (91%), Positives = 461/491 (94%), Gaps = 0/491 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMT VFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTPVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSST LERAEDP+LNGSD+RLFGRRL
Sbjct 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTGLERAEDPLLNGSDQRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDT INPRIQQAGWDAMQQGC GPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTAINPRIQQAGWDAMQQGCGGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASH+PE QA+AW+ L D+P+S LTNRAISETYPPGSTFKVITTAAAL AGATE
Sbjct 181 YDPNLLASHDPEAQAEAWKDLRDDPSSALTNRAISETYPPGSTFKVITTAAALQAGATEN 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
+QLTAA IPLP STA LENYGGAPCG TVSLREAF KSCNTAFVQLGI TGA ALRS
Sbjct 241 DQLTAAANIPLPDSTATLENYGGAPCGSGQTVSLREAFAKSCNTAFVQLGISTGAAALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
MA AFGLD+PP PLQVAESTVGPIPD+AALGM+SIGQKDVALTPL NA+IAATIANGG
Sbjct 301 MAHAFGLDTPPSAIPLQVAESTVGPIPDAAALGMSSIGQKDVALTPLQNAQIAATIANGG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
+ MRPYLV LKGPDLANISTT +QQRRAVSPQVAAKLTELMVGAE+VAQQKGAIPGVQ
Sbjct 361 VVMRPYLVDGLKGPDLANISTTAPHQQRRAVSPQVAAKLTELMVGAEQVAQQKGAIPGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG+
Sbjct 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGQ 480
Query 481 AVIEAALQGEP 491
AVIEAALQGEP
Sbjct 481 AVIEAALQGEP 491
>gi|41406117|ref|NP_958953.1| PbpA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118465786|ref|YP_879321.1| PbpA protein [Mycobacterium avium 104]
gi|41394465|gb|AAS02336.1| PbpA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167073|gb|ABK67970.1| PbpA protein [Mycobacterium avium 104]
Length=492
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/492 (88%), Positives = 455/492 (93%), Gaps = 1/492 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVF AD LRADPRNQRVLLDEYSRQRGQI AGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFAADSLRADPRNQRVLLDEYSRQRGQIVAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNP YAPVTGFYSLRYSST LERAEDP+LNGSD RLFGRRL
Sbjct 61 LLAYSVATDNRFRFLRVYPNPAQYAPVTGFYSLRYSSTGLERAEDPLLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGP-CKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRG NVDTTI PR+QQA WD MQQGC GP CKGAVVALEPSTGKILA+VSSP
Sbjct 121 ADFFTGRDPRGANVDTTIRPRVQQAAWDGMQQGCGGPPCKGAVVALEPSTGKILAMVSSP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLL+SH+PEVQAQAWQRL D+P +P+TNRAISETYPPGSTFKVITTAAAL AGA++
Sbjct 181 SYDPNLLSSHDPEVQAQAWQRLRDDPDNPMTNRAISETYPPGSTFKVITTAAALQAGASD 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
TEQLTAAP+IPLP STA LENYGG CG++PTVSL++AF SCNTAFVQLGI TGADALR
Sbjct 241 TEQLTAAPSIPLPNSTATLENYGGQACGNDPTVSLQQAFALSCNTAFVQLGILTGADALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
SMAR+FGLDS P PLQVAEST+G IPD+AALGM+SIGQKDVALTPL NAEIAATIANG
Sbjct 301 SMARSFGLDSTPSVIPLQVAESTIGIIPDAAALGMSSIGQKDVALTPLQNAEIAATIANG 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYLV SLKGPDL ISTT Y+QRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV
Sbjct 361 GVTMQPYLVDSLKGPDLTTISTTTPYEQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG 479
QIASKTGTAEHG+DPRHTPPHAWYIAFAPAQ PKVAVAVLVENGADRLSATGGALAAPIG
Sbjct 421 QIASKTGTAEHGSDPRHTPPHAWYIAFAPAQTPKVAVAVLVENGADRLSATGGALAAPIG 480
Query 480 RAVIEAALQGEP 491
RAVIEAALQG P
Sbjct 481 RAVIEAALQGGP 492
>gi|296167114|ref|ZP_06849524.1| penicillin binding protein transpeptidase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897556|gb|EFG77152.1| penicillin binding protein transpeptidase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=492
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/492 (88%), Positives = 455/492 (93%), Gaps = 1/492 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRRIS+TVMALIVLLLLNATMTQVF AD LRADPRNQRVLLDEYSRQRGQI AGGQ
Sbjct 1 MNTSLRRISITVMALIVLLLLNATMTQVFAADSLRADPRNQRVLLDEYSRQRGQIVAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNP VYAPVTGFYSLRYSST LERAEDP+LNGSD RLFGRRL
Sbjct 61 LLAYSVATDSRFRFLRVYPNPAVYAPVTGFYSLRYSSTGLERAEDPLLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGP-CKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRGGNVDTTI PR+QQAGWDAMQQGC GP CKGAVVALEPSTGKILA+VSSP
Sbjct 121 ADFFTGRDPRGGNVDTTIRPRVQQAGWDAMQQGCGGPPCKGAVVALEPSTGKILAMVSSP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLLASH+PEVQAQAWQRL D+P +P+TNRAISETYPPGSTFKVITTAAAL AGAT+
Sbjct 181 SYDPNLLASHDPEVQAQAWQRLRDDPQNPMTNRAISETYPPGSTFKVITTAAALQAGATD 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
EQLTAA +I LP STA LENYGG PCG EPTVSL+ AF SCNTAFVQLG+ TG+DALR
Sbjct 241 AEQLTAASSIQLPDSTATLENYGGMPCGVEPTVSLKRAFALSCNTAFVQLGMHTGSDALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
SMA +FGLD+ P PLQVAES+VG IPD+AALGMTSIGQKDVALTPL NA++AATIANG
Sbjct 301 SMAHSFGLDTTPSVIPLQVAESSVGIIPDAAALGMTSIGQKDVALTPLENAQVAATIANG 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYL+ SLKGPDLANISTTV Y+QRRAVSPQVAAKLTELM+GAEKVAQQKGAIPGV
Sbjct 361 GVTMQPYLIDSLKGPDLANISTTVPYEQRRAVSPQVAAKLTELMIGAEKVAQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG 479
QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQ PKVAVAVLVENG DRLSATGGALAAPIG
Sbjct 421 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQTPKVAVAVLVENGGDRLSATGGALAAPIG 480
Query 480 RAVIEAALQGEP 491
RAVI+AALQG P
Sbjct 481 RAVIQAALQGGP 492
>gi|254773071|ref|ZP_05214587.1| PbpA protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=492
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/492 (88%), Positives = 455/492 (93%), Gaps = 1/492 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVF AD LRADPRNQRVLLDEYSRQRGQI AGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFAADSLRADPRNQRVLLDEYSRQRGQIVAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNP YAPVTGFYSLRYSST LERAEDP+LNGSD RLFGRRL
Sbjct 61 LLAYSVATDNRFRFLRVYPNPAQYAPVTGFYSLRYSSTGLERAEDPLLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGP-CKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRG NVDTTI PR+QQA WD MQQGC GP CKGAVVALEPSTGKILA+VSSP
Sbjct 121 ADFFTGRDPRGANVDTTIRPRVQQAAWDGMQQGCGGPPCKGAVVALEPSTGKILAMVSSP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLL+SH+PEVQAQAWQRL D+P +P+TNRAISETYPPGSTFKVITTAAAL AGA++
Sbjct 181 SYDPNLLSSHDPEVQAQAWQRLRDDPDNPMTNRAISETYPPGSTFKVITTAAALQAGASD 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
TEQLTAAP++PLP STA LENYGG CG++PTVSL++AF SCNTAFVQLGI TGADALR
Sbjct 241 TEQLTAAPSMPLPNSTATLENYGGQACGNDPTVSLQQAFALSCNTAFVQLGILTGADALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
SMAR+FGLDS P PLQVAEST+G IPD+AALGM+SIGQKDVALTPL NAEIAATIANG
Sbjct 301 SMARSFGLDSTPSVIPLQVAESTIGIIPDAAALGMSSIGQKDVALTPLQNAEIAATIANG 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYLV SLKGPDL ISTT Y+QRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV
Sbjct 361 GVTMQPYLVDSLKGPDLTTISTTTPYEQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG 479
QIASKTGTAEHG+DPRHTPPHAWYIAFAPAQ PKVAVAVLVENGADRLSATGGALAAPIG
Sbjct 421 QIASKTGTAEHGSDPRHTPPHAWYIAFAPAQTPKVAVAVLVENGADRLSATGGALAAPIG 480
Query 480 RAVIEAALQGEP 491
RAVIEAALQG P
Sbjct 481 RAVIEAALQGGP 492
>gi|336462093|gb|EGO40935.1| cell division protein FtsI/penicillin-binding protein 2 [Mycobacterium
avium subsp. paratuberculosis S397]
Length=492
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/492 (88%), Positives = 454/492 (93%), Gaps = 1/492 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVF AD LRADPRNQRVLLDEYSRQRGQI AGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFAADSLRADPRNQRVLLDEYSRQRGQIVAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNP YAPVT FYSLRYSST LERAEDP+LNGSD RLFGRRL
Sbjct 61 LLAYSVATDNRFRFLRVYPNPAQYAPVTEFYSLRYSSTGLERAEDPLLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGP-CKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRG NVDTTI PR+QQA WD MQQGC GP CKGAVVALEPSTGKILA+VSSP
Sbjct 121 ADFFTGRDPRGANVDTTIRPRVQQAAWDGMQQGCGGPPCKGAVVALEPSTGKILAMVSSP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLL+SH+PEVQAQAWQRL D+P +P+TNRAISETYPPGSTFKVITTAAAL AGA++
Sbjct 181 SYDPNLLSSHDPEVQAQAWQRLRDDPDNPMTNRAISETYPPGSTFKVITTAAALQAGASD 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
TEQLTAAP+IPLP STA LENYGG CG++PTVSL++AF SCNTAFVQLGI TGADALR
Sbjct 241 TEQLTAAPSIPLPNSTATLENYGGQACGNDPTVSLQQAFALSCNTAFVQLGILTGADALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
SMAR+FGLDS P PLQVAEST+G IPD+AALGM+SIGQKDVALTPL NAEIAATIANG
Sbjct 301 SMARSFGLDSTPSVIPLQVAESTIGIIPDAAALGMSSIGQKDVALTPLQNAEIAATIANG 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYLV SLKGPDL ISTT Y+QRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV
Sbjct 361 GVTMQPYLVDSLKGPDLTTISTTTPYEQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG 479
QIASKTGTAEHG+DPRHTPPHAWYIAFAPAQ PKVAVAVLVENGADRLSATGGALAAPIG
Sbjct 421 QIASKTGTAEHGSDPRHTPPHAWYIAFAPAQTPKVAVAVLVENGADRLSATGGALAAPIG 480
Query 480 RAVIEAALQGEP 491
RAVIEAALQG P
Sbjct 481 RAVIEAALQGGP 492
>gi|254819102|ref|ZP_05224103.1| PbpA protein [Mycobacterium intracellulare ATCC 13950]
Length=492
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/492 (87%), Positives = 453/492 (93%), Gaps = 1/492 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLL+NATMTQVF AD LRADPRNQRVLLDEYSRQRGQI AGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLINATMTQVFAADSLRADPRNQRVLLDEYSRQRGQIVAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNP YAPVTGFYSLRYSST LERAEDP+LNGSD RLFGRRL
Sbjct 61 LLAYSVATDNRFRFLRVYPNPATYAPVTGFYSLRYSSTGLERAEDPLLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGP-CKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRG NVDTTI PR+QQA WD MQQGC GP CKGAVVALEPSTGKILA+VSSP
Sbjct 121 ADFFTGRDPRGANVDTTIKPRVQQAAWDGMQQGCGGPPCKGAVVALEPSTGKILAMVSSP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLL+SH+PEVQA+AWQ L D+P +P+TNRAISETYPPGSTFKVITTAAAL AGA++
Sbjct 181 SYDPNLLSSHDPEVQAKAWQLLRDDPDNPMTNRAISETYPPGSTFKVITTAAALQAGASD 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
TEQLTAAP+IPLP STA LENYGG CG+EPTVSL++AF SCNTAFVQLG+ TG+DALR
Sbjct 241 TEQLTAAPSIPLPNSTATLENYGGQSCGNEPTVSLQQAFALSCNTAFVQLGMLTGSDALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
MAR+FGLDS P PLQVAEST+G IPD+AALGM+SIGQKDVA+TPL NAEIAATIANG
Sbjct 301 GMARSFGLDSTPSVIPLQVAESTIGIIPDAAALGMSSIGQKDVAMTPLQNAEIAATIANG 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYL+ SLKGPDL ISTT Y+QRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV
Sbjct 361 GVTMQPYLIDSLKGPDLTTISTTAPYEQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG 479
QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQ PKVAVAVLVENGADRLSATGGALAAPIG
Sbjct 421 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQTPKVAVAVLVENGADRLSATGGALAAPIG 480
Query 480 RAVIEAALQGEP 491
RAVI+AALQG P
Sbjct 481 RAVIQAALQGGP 492
>gi|342860263|ref|ZP_08716915.1| PbpA protein [Mycobacterium colombiense CECT 3035]
gi|342132641|gb|EGT85870.1| PbpA protein [Mycobacterium colombiense CECT 3035]
Length=492
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/492 (86%), Positives = 454/492 (93%), Gaps = 1/492 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLL+NATMTQVF AD LRADPRNQRVLLDEYSRQRGQI AGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLINATMTQVFAADSLRADPRNQRVLLDEYSRQRGQIVAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD R+RFLRVYPNP YAPVTGFYSLRYSST LERAEDP+LNGSD RLFGRRL
Sbjct 61 LLAYSVATDNRYRFLRVYPNPAEYAPVTGFYSLRYSSTGLERAEDPLLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGP-CKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRG NVDTTI PR+Q+A WDAMQQGC GP CKGAVVALEP+TGKILA+VSSP
Sbjct 121 ADFFTGRDPRGANVDTTIKPRVQRAAWDAMQQGCGGPSCKGAVVALEPATGKILAMVSSP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLL+SH+PEVQAQAWQ+L D+P +PLTNRAISETYPPGSTFKVITTAAAL AGA++
Sbjct 181 SYDPNLLSSHDPEVQAQAWQKLRDDPNNPLTNRAISETYPPGSTFKVITTAAALQAGASD 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
TEQLTAAP+IPLP STA LENYGG CG+EPTVSLR+AF SCNTAFVQLG+ TG+DALR
Sbjct 241 TEQLTAAPSIPLPNSTATLENYGGESCGNEPTVSLRQAFALSCNTAFVQLGMLTGSDALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
+MAR+FGLDS P PLQVAESTVG IPD+AALGM+SIGQKDVA+TPL NAEIAATIAN
Sbjct 301 NMARSFGLDSTPSVIPLQVAESTVGIIPDAAALGMSSIGQKDVAMTPLQNAEIAATIAND 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYL+ SLKGPDL ISTT Y+QRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV
Sbjct 361 GVTMQPYLIDSLKGPDLTTISTTAPYEQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG 479
QIASKTGTAEHG+DPRHTPPHAWYIAFAPAQ P+VAVAVLVENGAD LSATGGALAAPIG
Sbjct 421 QIASKTGTAEHGSDPRHTPPHAWYIAFAPAQTPRVAVAVLVENGADHLSATGGALAAPIG 480
Query 480 RAVIEAALQGEP 491
RAVI+AALQG P
Sbjct 481 RAVIQAALQGGP 492
>gi|15826881|ref|NP_301144.1| penicillin-binding protein [Mycobacterium leprae TN]
gi|221229359|ref|YP_002502775.1| putative penicillin-binding protein [Mycobacterium leprae Br4923]
gi|13092428|emb|CAC29526.1| putative penicillin-binding protein [Mycobacterium leprae]
gi|219932466|emb|CAR70111.1| putative penicillin-binding protein [Mycobacterium leprae Br4923]
Length=492
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/490 (86%), Positives = 443/490 (91%), Gaps = 1/490 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRRISVTVMALIVLLLLNAT+TQVFTADGLRADPRNQRVLLDEYSRQRGQITA GQ
Sbjct 1 MNTSLRRISVTVMALIVLLLLNATVTQVFTADGLRADPRNQRVLLDEYSRQRGQITASGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNP VYAP+TGFYSLRYSST LE+AED +LNGSD RLFGRRL
Sbjct 61 LLAYSVATDNRFRFLRVYPNPAVYAPITGFYSLRYSSTGLEQAEDALLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYG-PCKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRGGNVDTTINPR+QQ GWDAMQQGC G PCKGAVVALEPSTGKILA+VS+P
Sbjct 121 ADFFTGRDPRGGNVDTTINPRVQQTGWDAMQQGCGGSPCKGAVVALEPSTGKILAMVSTP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLLASHNPE QAQAW+RL D+P SPL NRAISETYPPGSTFKVITT AAL AGAT
Sbjct 181 SYDPNLLASHNPEEQAQAWRRLHDDPNSPLINRAISETYPPGSTFKVITTTAALQAGATT 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
++QLTA PTIPLPGSTA LENYGG CG PTVSL +AF SCNTAFVQLG+ GADALR
Sbjct 241 SDQLTAEPTIPLPGSTATLENYGGVSCGPGPTVSLSQAFAMSCNTAFVQLGLLIGADALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
SMA +FGLDS P PLQVAESTVG IPD+AALGM+SIGQ+DVALTPL NA+IAATIAN
Sbjct 301 SMAHSFGLDSNPNVIPLQVAESTVGVIPDAAALGMSSIGQRDVALTPLQNAQIAATIANA 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYL+ +LKGPDLANI TT YQQ RAVSPQ+AA LTELMVGAEKV QQKGAIPGV
Sbjct 361 GVTMQPYLIDNLKGPDLANIRTTTSYQQHRAVSPQIAATLTELMVGAEKVTQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIG 479
QIASKTGTAEHGTDPRHTPPHAWYIAFAP QAPKVAVAVLVE GAD L ATGGALAAPIG
Sbjct 421 QIASKTGTAEHGTDPRHTPPHAWYIAFAPVQAPKVAVAVLVEKGADSLFATGGALAAPIG 480
Query 480 RAVIEAALQG 489
RAVIEAALQG
Sbjct 481 RAVIEAALQG 490
>gi|167968146|ref|ZP_02550423.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis H37Ra]
Length=409
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/409 (99%), Positives = 409/409 (100%), Gaps = 0/409 (0%)
Query 83 VYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRI 142
+YAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRI
Sbjct 1 MYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRI 60
Query 143 QQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLG 202
QQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLG
Sbjct 61 QQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLG 120
Query 203 DNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYG 262
DNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYG
Sbjct 121 DNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYG 180
Query 263 GAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAEST 322
GAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAEST
Sbjct 181 GAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAEST 240
Query 323 VGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTT 382
VGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTT
Sbjct 241 VGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTT 300
Query 383 VGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAW 442
VGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAW
Sbjct 301 VGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAW 360
Query 443 YIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP 491
YIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP
Sbjct 361 YIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP 409
>gi|118469030|ref|YP_884451.1| penicillin binding protein transpeptidase domain-containing protein
[Mycobacterium smegmatis str. MC2 155]
gi|206558135|sp|A0QNG3.1|PBPA_MYCS2 RecName: Full=Penicillin-binding protein A; Short=PBPA
gi|118170317|gb|ABK71213.1| Penicillin binding protein transpeptidase domain protein [Mycobacterium
smegmatis str. MC2 155]
Length=491
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/488 (81%), Positives = 431/488 (89%), Gaps = 0/488 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRR++V +M LIVLLL NAT+TQVF ADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNTSLRRVAVAIMVLIVLLLANATVTQVFAADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSV+TDGRFR+LRVYPNP+ YAPVTGFYSL YSST LERAED +LNGSD RLFGRRL
Sbjct 61 LLAYSVSTDGRFRYLRVYPNPQAYAPVTGFYSLGYSSTGLERAEDAVLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTI P++QQA WDAMQ GC GPC+G+VVALEPSTGKILA+VS+PS
Sbjct 121 ADFFTGRDPRGGNVDTTIKPQVQQAAWDAMQNGCDGPCRGSVVALEPSTGKILAMVSAPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLA+H+ QA AW++L D+P SPL NRAISETYPPGSTFKVITTAAAL AGA
Sbjct 181 YDPNLLATHDLAAQADAWEKLRDDPQSPLLNRAISETYPPGSTFKVITTAAALQAGARPQ 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
QLT+AP PLP STA LEN+GGAPCG PTVSL+EAF KSCNTAFV+LG+ TG D L++
Sbjct 241 TQLTSAPRTPLPDSTATLENFGGAPCGPGPTVSLQEAFAKSCNTAFVELGLSTGTDKLKA 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
MA+AFGLD+PP PLQVAEST GPI D+AALGM+SIGQ+DVALTPL NA++AATIAN G
Sbjct 301 MAQAFGLDTPPPAIPLQVAESTTGPIVDAAALGMSSIGQRDVALTPLQNAQVAATIANDG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
I MRPYLV SLKGPDLA ISTT Q+RRAVSPQVAA LT+LMV AE+V QQKGAI GVQ
Sbjct 361 IAMRPYLVESLKGPDLATISTTTPEQERRAVSPQVAATLTDLMVAAEQVTQQKGAIAGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPR+TPPHAWYIAFAPAQ PKVAVAVLVE+G DRLSATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRNTPPHAWYIAFAPAQDPKVAVAVLVEDGGDRLSATGGALAAPIGR 480
Query 481 AVIEAALQ 488
A I AAL+
Sbjct 481 ATIAAALR 488
>gi|108796998|ref|YP_637195.1| peptidoglycan glycosyltransferase [Mycobacterium sp. MCS]
gi|119866082|ref|YP_936034.1| peptidoglycan glycosyltransferase [Mycobacterium sp. KMS]
gi|126432630|ref|YP_001068321.1| peptidoglycan glycosyltransferase [Mycobacterium sp. JLS]
gi|108767417|gb|ABG06139.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Mycobacterium
sp. MCS]
gi|119692171|gb|ABL89244.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Mycobacterium
sp. KMS]
gi|126232430|gb|ABN95830.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Mycobacterium
sp. JLS]
Length=491
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/488 (80%), Positives = 429/488 (88%), Gaps = 0/488 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRRI+VT+M LIVLLL NAT+TQVFTADGLR DPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNTSLRRIAVTIMVLIVLLLGNATVTQVFTADGLRTDPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSV+T GRFRFLRVYPN + YAPVTGFYSL YSST LERAED ILNGSD RLFGRRL
Sbjct 61 LLAYSVSTPGRFRFLRVYPNAQAYAPVTGFYSLTYSSTGLERAEDTILNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNV TTINPR+QQA W+AM+QGC GPCKG+VVALEPSTGKILA+VS+PS
Sbjct 121 ADFFTGRDPRGGNVVTTINPRVQQAAWEAMEQGCNGPCKGSVVALEPSTGKILAMVSAPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLA+H+ E Q AWQ+L DNP +PL NRAISETYPPGSTFKVITTAAAL GAT
Sbjct 181 YDPNLLATHDVEEQTAAWQQLRDNPDNPLVNRAISETYPPGSTFKVITTAAALQNGATPD 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
QLTAAP IPLP S+ LEN+GG+ CG PT LREAF +SCNTAFV+LG TG +AL++
Sbjct 241 TQLTAAPRIPLPNSSVTLENFGGSACGGGPTAPLREAFARSCNTAFVELGTDTGTEALKN 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A AFGLD+PP P PLQVAESTVGPI D+AALGM+SIGQ+DVALTPL NA +AAT+AN G
Sbjct 301 TASAFGLDTPPAPIPLQVAESTVGPIGDAAALGMSSIGQRDVALTPLQNAMVAATVANEG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
+TMRPYLV SL+GPDLANI+TT ++RRAV+P+VAA LT+LMVGAE+ QQKGAI GVQ
Sbjct 361 VTMRPYLVDSLRGPDLANITTTEPVEERRAVTPEVAATLTDLMVGAEQQTQQKGAIAGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPR+TPPHAWYIAFAPAQAPKVAVAVLVENG +RLSATGG +AAPIGR
Sbjct 421 IASKTGTAEHGTDPRNTPPHAWYIAFAPAQAPKVAVAVLVENGGNRLSATGGQVAAPIGR 480
Query 481 AVIEAALQ 488
A I AAL+
Sbjct 481 ATIAAALR 488
>gi|145221404|ref|YP_001132082.1| penicillin-binding protein, transpeptidase [Mycobacterium gilvum
PYR-GCK]
gi|315441716|ref|YP_004074595.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Mycobacterium
sp. Spyr1]
gi|145213890|gb|ABP43294.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Mycobacterium
gilvum PYR-GCK]
gi|315260019|gb|ADT96760.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Mycobacterium
sp. Spyr1]
Length=491
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/489 (80%), Positives = 422/489 (87%), Gaps = 0/489 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRRISV +MALIV+LL NAT+TQVFTADGLR+DPRNQRVLLDEYSRQRGQI+AGGQ
Sbjct 1 MNTSLRRISVMIMALIVVLLANATLTQVFTADGLRSDPRNQRVLLDEYSRQRGQISAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSV+T+GRFRFLRVYPNP YAPVTGFYSL YSS+ LERAED ILNGSD RLFGRRL
Sbjct 61 LLAYSVSTEGRFRFLRVYPNPMAYAPVTGFYSLTYSSSGLERAEDTILNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNV TTINP +QQA WDAM+ GC GPCKG+VVALEPSTGKILA+VS+PS
Sbjct 121 ADFFTGRDPRGGNVSTTINPDVQQAAWDAMEDGCNGPCKGSVVALEPSTGKILAMVSAPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASHN + QAQ WQ L DNP SPL NRAISETYPPGSTFKV+TTAAAL AGAT
Sbjct 181 YDPNLLASHNIDEQAQTWQALRDNPDSPLLNRAISETYPPGSTFKVLTTAAALEAGATPQ 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
QLTAAP IPLP STA LEN+GG CG PT +L AF SCNTAFVQLGI TGADALRS
Sbjct 241 TQLTAAPQIPLPNSTATLENFGGTACGGGPTATLEYAFAHSCNTAFVQLGIDTGADALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A FG+D+ P PLQVAEST+GPI D AALGMTSIGQ+DVA+TPL NA +AAT+AN G
Sbjct 301 TAVGFGVDTAPPAIPLQVAESTIGPIVDDAALGMTSIGQRDVAMTPLQNAMVAATVANNG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
+TM PYLV SLKGPDLANI+TT ++RRAV +VA LT+LMV AE+V QQKGAI GVQ
Sbjct 361 VTMTPYLVESLKGPDLANIATTSPTEERRAVPEKVADTLTDLMVAAEQVTQQKGAIAGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPR+TPPHAWYIAFAPAQAP VAVAVLVENG DRL ATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRNTPPHAWYIAFAPAQAPTVAVAVLVENGGDRLGATGGALAAPIGR 480
Query 481 AVIEAALQG 489
A I AAL+G
Sbjct 481 ATIAAALRG 489
>gi|2344823|emb|CAA94720.1| PbpA [Mycobacterium leprae]
Length=474
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/472 (83%), Positives = 411/472 (88%), Gaps = 1/472 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRRISVTVMALIVLLLLNAT+TQVFTADGLRADPRNQRVLLDEYSRQRGQITA GQ
Sbjct 1 MNTSLRRISVTVMALIVLLLLNATVTQVFTADGLRADPRNQRVLLDEYSRQRGQITASGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATD RFRFLRVYPNP VYAP+TGFYSLRYSST LE+AED +LNGSD RLFGRRL
Sbjct 61 LLAYSVATDNRFRFLRVYPNPAVYAPITGFYSLRYSSTGLEQAEDALLNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYG-PCKGAVVALEPSTGKILALVSSP 179
ADFFTGRDPRGGNVDTTINPR+QQ GWDAMQQGC G PCKGAVVALEPSTGKILA+VS+P
Sbjct 121 ADFFTGRDPRGGNVDTTINPRVQQTGWDAMQQGCGGSPCKGAVVALEPSTGKILAMVSTP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPNLLASHNPE QAQAW+RL D+P SPL NRAISETYPPGSTFKVITT AAL AGAT
Sbjct 181 SYDPNLLASHNPEEQAQAWRRLHDDPNSPLINRAISETYPPGSTFKVITTTAALQAGATT 240
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
++QLTA PTIPLPGSTA LENYGG C PTVSL + GADALR
Sbjct 241 SDQLTAEPTIPLPGSTATLENYGGVSCDPGPTVSLSQHSPCRVTPRSSSWACFIGADALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
SMA +FGLDS P PLQVAESTVG IPD+AALGM+SIGQ+DVALTPL NA+IAATIAN
Sbjct 301 SMAHSFGLDSNPNVIPLQVAESTVGVIPDAAALGMSSIGQRDVALTPLQNAQIAATIANA 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+PYL+ +LKGPDLANI TT YQQ RAVSPQ+AA LTELMVGAEKV QQKGAIPGV
Sbjct 361 GVTMQPYLIDNLKGPDLANIRTTTSYQQHRAVSPQIAATLTELMVGAEKVTQQKGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATG 471
QIASKTGTAEHGTDPRHTPPHAWYIAFAP QAPKVAVAVLVE GAD L ATG
Sbjct 421 QIASKTGTAEHGTDPRHTPPHAWYIAFAPVQAPKVAVAVLVEKGADSLFATG 472
>gi|120401053|ref|YP_950882.1| penicillin-binding transpeptidase [Mycobacterium vanbaalenii
PYR-1]
gi|119953871|gb|ABM10876.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Mycobacterium
vanbaalenii PYR-1]
Length=491
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/488 (79%), Positives = 421/488 (87%), Gaps = 0/488 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRRISV +MAL+V+LL NAT+TQVFTADGLR+DPRNQRVLLDEYSRQRGQI+AGGQ
Sbjct 1 MNTSLRRISVMIMALVVVLLANATLTQVFTADGLRSDPRNQRVLLDEYSRQRGQISAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSV+T GRFRFLRVYP+P +YAPVTGFYSL YSST LERAED ILNGSD RLFGRRL
Sbjct 61 LLAYSVSTQGRFRFLRVYPDPMIYAPVTGFYSLSYSSTGLERAEDTILNGSDERLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGG V TTINP++Q+A WDAM++GC GPC G+VVALEPSTGKILALVS+PS
Sbjct 121 ADFFTGRDPRGGTVATTINPQVQRAAWDAMEKGCDGPCTGSVVALEPSTGKILALVSAPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLA+H+ QA+AWQRL D+P SPL NRAISE YPPGSTFKVITTAAAL AGAT
Sbjct 181 YDPNLLATHDVAEQAEAWQRLRDDPGSPLLNRAISEAYPPGSTFKVITTAAALQAGATPD 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
QLTAAP I LP STA L+N+GG CG PT SLR AF SCNTAFVQLGI TGAD LRS
Sbjct 241 TQLTAAPQIALPDSTATLQNFGGVSCGAGPTTSLRNAFAHSCNTAFVQLGIDTGADPLRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A FG+ + P PLQVAESTVGPI D AALGM+SIGQ+DVALTPL NA IAA +AN G
Sbjct 301 TAGDFGVGAVPPAIPLQVAESTVGPIADDAALGMSSIGQRDVALTPLQNAMIAAAVANKG 360
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
+ MRPYLV SLKGPDLANI+TT ++RRAV+ QVA LT+LMV AE+V QQKGAI GVQ
Sbjct 361 VMMRPYLVESLKGPDLANIATTAPTEERRAVTEQVADTLTDLMVAAEQVTQQKGAIAGVQ 420
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGR 480
IASKTGTAEHGTDPR+TPPHAWYIAFAPAQAPKVAVAVLVENG +RLSATGGALAAPIGR
Sbjct 421 IASKTGTAEHGTDPRNTPPHAWYIAFAPAQAPKVAVAVLVENGGNRLSATGGALAAPIGR 480
Query 481 AVIEAALQ 488
A I AAL+
Sbjct 481 ATIAAALR 488
>gi|333988657|ref|YP_004521271.1| penicillin-binding protein PbpA [Mycobacterium sp. JDM601]
gi|333484625|gb|AEF34017.1| penicillin-binding protein PbpA [Mycobacterium sp. JDM601]
Length=495
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/493 (79%), Positives = 426/493 (87%), Gaps = 4/493 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRR+++T+MALIVLLL NAT+TQVF ADGLRADPRNQRVLLDEYSRQRGQITA GQ
Sbjct 1 MNTSLRRVTMTLMALIVLLLGNATLTQVFAADGLRADPRNQRVLLDEYSRQRGQITASGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATDGR ++ R+YP+P VYAP+TGFYSLRYSS+ LERAED +LNGSD RLFG RL
Sbjct 61 LLAYSVATDGRIKYQRIYPDPAVYAPITGFYSLRYSSSGLERAEDTVLNGSDPRLFGLRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGR PRGG V+TTI PR+QQ GW+AM+ GC G C+GAVVALEPSTGKILALVS+PS
Sbjct 121 ADFFTGRSPRGGTVETTIRPRVQQVGWEAMRSGCDGGCRGAVVALEPSTGKILALVSTPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLL+SH+ Q QAWQRL DNP SPLTNRAISETYPPGSTFKVITTAAAL AG +E
Sbjct 181 YDPNLLSSHDSVQQGQAWQRLRDNPDSPLTNRAISETYPPGSTFKVITTAAALQAGISEN 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPC-GDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
E LT A I LP ST +LEN+GG C G E TV LR AF +SCNTAFVQLGIRTG+DALR
Sbjct 241 EPLTNAAHIALPDSTVKLENFGGNTCEGTEQTVPLRVAFARSCNTAFVQLGIRTGSDALR 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
+ A+ FGLD P P PLQVAEST+GPI D+AALGMTSIGQKDVA+TPL NA IAATIANG
Sbjct 301 NTAQGFGLDITPEPIPLQVAESTIGPIRDAAALGMTSIGQKDVAVTPLKNAVIAATIANG 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+TM+P+LV L+GPDLA I+TT +QRRAVS QVAAKLTELM+ AEKV QQ+GAIPGV
Sbjct 361 GLTMQPHLVAGLEGPDLAGIATTQPREQRRAVSSQVAAKLTELMIDAEKVTQQEGAIPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR---LSATGGALAA 476
QIASKTGTAEHGTDPR+TPPHAWYIAFAPA APKVAVAV+VE AD LSATGGALAA
Sbjct 421 QIASKTGTAEHGTDPRNTPPHAWYIAFAPASAPKVAVAVVVEGTADGDAPLSATGGALAA 480
Query 477 PIGRAVIEAALQG 489
PIGRAVIEAALQG
Sbjct 481 PIGRAVIEAALQG 493
>gi|289552266|ref|ZP_06441476.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis KZN
605]
gi|289436898|gb|EFD19391.1| penicillin-binding protein pbpA [Mycobacterium tuberculosis KZN
605]
Length=397
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/346 (99%), Positives = 341/346 (99%), Gaps = 0/346 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL
Sbjct 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET
Sbjct 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS
Sbjct 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTP 346
MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQK P
Sbjct 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKGRCADP 346
>gi|169627142|ref|YP_001700791.1| penicillin-binding protein PbpA [Mycobacterium abscessus ATCC
19977]
gi|169239109|emb|CAM60137.1| Probable penicillin-binding protein PbpA [Mycobacterium abscessus]
Length=504
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/502 (69%), Positives = 401/502 (80%), Gaps = 13/502 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN S+RR+S+ VM L+VLLL NAT+TQVFTA GLRADPRNQR+LLDEYSRQRGQI+A GQ
Sbjct 1 MNTSIRRVSLAVMGLVVLLLANATITQVFTAPGLRADPRNQRILLDEYSRQRGQISASGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLA SVATD RFRFLR Y +PEVYAPVTGFYSL YSST LERAED +LNGSD RLFGRRL
Sbjct 61 LLASSVATDSRFRFLRQYADPEVYAPVTGFYSLNYSSTGLERAEDTMLNGSDPRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGG+V TTI P +QQA +DAM +GC C+GAVVALEPSTGKILA+VS+PS
Sbjct 121 ADFFTGRDPRGGSVVTTIRPDVQQAAYDAMHRGCKDGCRGAVVALEPSTGKILAMVSTPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLAS +PE + AW+RL ++PA P+ NRAI++TYPPGSTFKVITTAAALA G T
Sbjct 181 YDPNLLASQDPEKENAAWKRLTEDPAQPMLNRAIAQTYPPGSTFKVITTAAALADGKTVN 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGI-RTGADALR 299
++TA+PTI LPGS A LENY A CG T SL+EAF +SCNTAF +LG + D L
Sbjct 241 TEVTASPTIFLPGSNATLENYNRASCGGGDTTSLKEAFARSCNTAFAKLGAEQLKRDKLV 300
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
A+AFGLD PLQVA STVGP+ D AA+ M+SIGQKDVA+TPL NA +AA +AN
Sbjct 301 KAAQAFGLDRELDSIPLQVATSTVGPMSDDAAVAMSSIGQKDVAMTPLQNAMVAAAVANK 360
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGV 419
G+ M+P+LV SLKGPDL+N+STT +AV+P +A LTELM+ +E+ Q GA+PGV
Sbjct 361 GVLMQPHLVDSLKGPDLSNLSTTTPDDIGQAVTPAIANTLTELMIASEQRTAQTGALPGV 420
Query 420 QIASKTGTAEHGTDPRHTPPHAWYIAFAPAQA-----------PKVAVAVLVENGADR-L 467
QIASKTGTAEHGTDPR+TPPHAWYIAFAPAQ PKVA+AVLVE+G DR L
Sbjct 421 QIASKTGTAEHGTDPRNTPPHAWYIAFAPAQGTTTDPQATAVTPKVAIAVLVEDGGDRAL 480
Query 468 SATGGALAAPIGRAVIEAALQG 489
+ATGG++AAPIGR VI AALQG
Sbjct 481 AATGGSVAAPIGRQVIAAALQG 502
>gi|226303519|ref|YP_002763477.1| penicillin-binding protein PbpA [Rhodococcus erythropolis PR4]
gi|226182634|dbj|BAH30738.1| penicillin-binding protein PbpA [Rhodococcus erythropolis PR4]
Length=488
Score = 612 bits (1578), Expect = 5e-173, Method: Compositional matrix adjust.
Identities = 313/490 (64%), Positives = 373/490 (77%), Gaps = 4/490 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR+++ VM ++V LL NAT QV AD LRADPRN RVLLDEYSRQRGQI+A GQ
Sbjct 1 MNTPLRRVAMAVMVMVVALLANATYVQVIKADDLRADPRNSRVLLDEYSRQRGQISASGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
+LA S ATD R+++LR YPNP YAPVTGFYS++Y S LER EDPILNGSD RLF +R
Sbjct 61 VLAASRATDDRYKYLREYPNPYPYAPVTGFYSMQYGSAGLERTEDPILNGSDNRLFSQRF 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
D +GRDPRGGNV TT+NP +QQ +D + Y G+VVA+EPSTG+IL +VS+PS
Sbjct 121 FDLVSGRDPRGGNVVTTLNPAMQQVAYDQLTSKGY---TGSVVAIEPSTGRILTMVSTPS 177
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASH+ +AW L +P PL NRAIS+TYPPGSTFKV+TTAAAL GAT
Sbjct 178 YDPNLLASHDGAETTKAWDELNADPNDPLVNRAISQTYPPGSTFKVLTTAAALGNGATPD 237
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
+QLTAAP I LPG++ LENY G+ CG PT SLR+AF +SCNTAFV+LGI+ GADA++
Sbjct 238 DQLTAAPQITLPGTSTTLENYNGSTCGPNPTASLRDAFARSCNTAFVELGIKDGADAIKD 297
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A AFG+ PL VA+STVG I D AALG TSIGQ+DVA+TPL NA IAAT+ANGG
Sbjct 298 EASAFGIGPNTPAIPLPVADSTVGDISDDAALGQTSIGQRDVAVTPLENAVIAATVANGG 357
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
+ M+P L+ L+ PDL ++ST +A+SP VAA LT+LM+G+E G IPGVQ
Sbjct 358 VRMQPNLISQLQAPDLTDLSTPSPVSMGQAISPAVAATLTDLMIGSENFTGGDGKIPGVQ 417
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAAPIG 479
IASKTGTAEHG +PR TPPHAWYIAFAPAQ P VAVAV+VENG DR L+ATGG++AAPIG
Sbjct 418 IASKTGTAEHGVNPRETPPHAWYIAFAPAQNPTVAVAVIVENGGDRGLAATGGSVAAPIG 477
Query 480 RAVIEAALQG 489
RAVI A +QG
Sbjct 478 RAVIAAGIQG 487
>gi|229492077|ref|ZP_04385888.1| peptidoglycan glycosyltransferase [Rhodococcus erythropolis SK121]
gi|229321014|gb|EEN86824.1| peptidoglycan glycosyltransferase [Rhodococcus erythropolis SK121]
Length=488
Score = 612 bits (1577), Expect = 6e-173, Method: Compositional matrix adjust.
Identities = 313/490 (64%), Positives = 372/490 (76%), Gaps = 4/490 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR+++ VM ++V LL NAT QV AD LRADPRN RVLLDEYSRQRGQI+A GQ
Sbjct 1 MNTPLRRVAMAVMVMVVALLANATYVQVIKADDLRADPRNSRVLLDEYSRQRGQISASGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
+LA S ATD R+++LR YPNP YAPVTGFYS++Y S LER EDPILNGSD RLF +R
Sbjct 61 VLAASRATDDRYKYLREYPNPYPYAPVTGFYSMQYGSAGLERTEDPILNGSDNRLFSQRF 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
D +GRDPRGGNV TT+NP +QQ +D + Y G+VVA+EPSTG+IL +VS+PS
Sbjct 121 FDLVSGRDPRGGNVVTTLNPAMQQVAYDQLTSKGY---TGSVVAIEPSTGRILTMVSTPS 177
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASH+ +AW L +P PL NRAIS+TYPPGSTFKV+TTAAAL GAT
Sbjct 178 YDPNLLASHDGAETTKAWDELNADPNDPLVNRAISQTYPPGSTFKVLTTAAALGNGATPD 237
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
+QLTAAP I LPG+ LENY G+ CG PT SLR+AF +SCNTAFV+LGI+ GADA++
Sbjct 238 DQLTAAPQITLPGTNTTLENYNGSTCGPNPTASLRDAFARSCNTAFVELGIKDGADAIKD 297
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A AFG+ PL VA+STVG I D AALG TSIGQ+DVA+TPL NA IAAT+ANGG
Sbjct 298 EASAFGIGPNTPAIPLPVADSTVGDISDDAALGQTSIGQRDVAVTPLENAVIAATVANGG 357
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
+ M+P L+ L+ PDL ++ST +A+SP VAA LT+LM+G+E G IPGVQ
Sbjct 358 VRMQPNLISQLQAPDLTDLSTPSPVSMGQAISPAVAATLTDLMIGSENFTGGDGKIPGVQ 417
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAAPIG 479
IASKTGTAEHG +PR TPPHAWYIAFAPAQ P VAVAV+VENG DR L+ATGG++AAPIG
Sbjct 418 IASKTGTAEHGVNPRETPPHAWYIAFAPAQNPTVAVAVIVENGGDRGLAATGGSVAAPIG 477
Query 480 RAVIEAALQG 489
RAVI A +QG
Sbjct 478 RAVIAAGIQG 487
>gi|312137538|ref|YP_004004874.1| penicillin-binding protein [Rhodococcus equi 103S]
gi|311886877|emb|CBH46185.1| penicillin-binding protein [Rhodococcus equi 103S]
Length=495
Score = 606 bits (1563), Expect = 3e-171, Method: Compositional matrix adjust.
Identities = 306/496 (62%), Positives = 370/496 (75%), Gaps = 11/496 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR+++ VM ++ LL NAT QV AD LR DPRN RVLLDEYSRQRGQI+AGGQ
Sbjct 1 MNTPLRRVALAVMVMVAALLANATYVQVIKADDLRGDPRNSRVLLDEYSRQRGQISAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPE-------VYAPVTGFYSLRYSSTALERAEDPILNGSDR 113
+LA SV TD R+++LRVYP APVTGFYS++Y S LE+AEDP+LNGSD
Sbjct 61 VLASSVPTDDRYKYLRVYPPNPAAPSSPFANAPVTGFYSMQYGSAGLEKAEDPVLNGSDN 120
Query 114 RLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKIL 173
RLF +R D +GRDPRGGNV +TI+P +QQ +D + Y G+VVA+EPSTG IL
Sbjct 121 RLFSKRFFDLVSGRDPRGGNVVSTIDPVMQQVAYDELTAKGY---TGSVVAIEPSTGNIL 177
Query 174 ALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAAL 233
A+ S+PSYDPN L+SH+ + AW L +P P+ NRA+S TYPPGSTFKV+ TAAAL
Sbjct 178 AMASTPSYDPNTLSSHDGAETSAAWDELNSDPDRPMLNRAVSATYPPGSTFKVVVTAAAL 237
Query 234 AAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRT 293
GA EQLTAAP I LPG++ LENY G CG T SLREAF +SCNTAFV+LGI+T
Sbjct 238 ENGANPDEQLTAAPNITLPGTSTTLENYNGTTCGGGATASLREAFARSCNTAFVELGIKT 297
Query 294 GADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIA 353
G+DAL A+AFG+ P+ VA+ST+G IPD AALG +SIGQ+DVALTPL NAEIA
Sbjct 298 GSDALAEQAKAFGIGPGTPGIPIPVADSTIGSIPDDAALGQSSIGQRDVALTPLQNAEIA 357
Query 354 ATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQK 413
ATIANGG+ M +LV L+GPDL+N++TT RAVSP+VA+ LT+LM+G+E +
Sbjct 358 ATIANGGMRMESHLVSQLQGPDLSNLATTSPKSLGRAVSPEVASTLTQLMIGSENNTAGQ 417
Query 414 GAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGG 472
G IPGVQIASKTGTAEHG DPR+TPPHAWYI FAPAQ P VA+AV+VE+G DR L+ATGG
Sbjct 418 GKIPGVQIASKTGTAEHGNDPRNTPPHAWYIGFAPAQNPTVAIAVIVEDGGDRALAATGG 477
Query 473 ALAAPIGRAVIEAALQ 488
++AAPIGRAVI A LQ
Sbjct 478 SVAAPIGRAVIAAGLQ 493
>gi|325677496|ref|ZP_08157160.1| penicillin binding protein transpeptidase domain protein [Rhodococcus
equi ATCC 33707]
gi|325551743|gb|EGD21441.1| penicillin binding protein transpeptidase domain protein [Rhodococcus
equi ATCC 33707]
Length=495
Score = 603 bits (1556), Expect = 2e-170, Method: Compositional matrix adjust.
Identities = 305/496 (62%), Positives = 369/496 (75%), Gaps = 11/496 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR+++ VM ++ LL NAT QV AD LR DPRN RVLLDEYSRQRGQI+AGGQ
Sbjct 1 MNTPLRRVALAVMVMVAALLANATYVQVIKADDLRGDPRNSRVLLDEYSRQRGQISAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPE-------VYAPVTGFYSLRYSSTALERAEDPILNGSDR 113
+LA SV TD R+++LRVYP APVTGFYS++Y S LE+AEDP+LNGSD
Sbjct 61 VLASSVPTDDRYKYLRVYPPNPAAPSSPFANAPVTGFYSMQYGSAGLEKAEDPVLNGSDN 120
Query 114 RLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKIL 173
RLF +R D +GRDPRGGNV +TI+P +QQ +D + Y G+VVA+EPSTG IL
Sbjct 121 RLFSKRFFDLVSGRDPRGGNVVSTIDPVMQQVAYDELTAKGY---TGSVVAIEPSTGNIL 177
Query 174 ALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAAL 233
A+ S+PSYDPN L+SH+ + AW L +P P+ NRA+S TYPPGSTFKV+ TAAAL
Sbjct 178 AMASTPSYDPNTLSSHDGAETSAAWDELNSDPDRPMLNRAVSATYPPGSTFKVVVTAAAL 237
Query 234 AAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRT 293
GA E LTAAP I LPG++ LENY G CG T SLREAF +SCNTAFV+LGI+T
Sbjct 238 ENGANPDELLTAAPNITLPGTSTTLENYNGTTCGGGATASLREAFARSCNTAFVELGIKT 297
Query 294 GADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIA 353
G+DAL A+AFG+ P+ VA+ST+G IPD AALG +SIGQ+DVALTPL NAEIA
Sbjct 298 GSDALAEQAKAFGIGPGTPGIPIPVADSTIGSIPDDAALGQSSIGQRDVALTPLQNAEIA 357
Query 354 ATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQK 413
ATIANGG+ M +LV L+GPDL+N++TT RAVSP+VA+ LT+LM+G+E +
Sbjct 358 ATIANGGMRMESHLVSQLQGPDLSNLATTSPKSLGRAVSPEVASTLTQLMIGSENNTAGQ 417
Query 414 GAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGG 472
G IPGVQIASKTGTAEHG DPR+TPPHAWYI FAPAQ P VA+AV+VE+G DR L+ATGG
Sbjct 418 GKIPGVQIASKTGTAEHGNDPRNTPPHAWYIGFAPAQNPTVAIAVIVEDGGDRALAATGG 477
Query 473 ALAAPIGRAVIEAALQ 488
++AAPIGRAVI A LQ
Sbjct 478 SVAAPIGRAVIAAGLQ 493
>gi|298527414|ref|ZP_07014823.1| penicillin-binding protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497208|gb|EFI32502.1| penicillin-binding protein [Mycobacterium tuberculosis 94_M4241A]
Length=308
Score = 598 bits (1542), Expect = 7e-169, Method: Compositional matrix adjust.
Identities = 291/292 (99%), Positives = 292/292 (100%), Gaps = 0/292 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ
Sbjct 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL
Sbjct 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS
Sbjct 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET
Sbjct 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIR 292
EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGI+
Sbjct 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIK 292
>gi|226362925|ref|YP_002780705.1| penicillin-binding protein PbpA [Rhodococcus opacus B4]
gi|226241412|dbj|BAH51760.1| penicillin-binding protein PbpA [Rhodococcus opacus B4]
Length=495
Score = 586 bits (1510), Expect = 3e-165, Method: Compositional matrix adjust.
Identities = 313/497 (63%), Positives = 377/497 (76%), Gaps = 11/497 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR+++ VM ++V LL NAT QV AD LRADPRN RVLLDEYSRQRGQI+A GQ
Sbjct 1 MNTPLRRVAIAVMVMVVALLANATYVQVIKADNLRADPRNSRVLLDEYSRQRGQISAAGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPE-------VYAPVTGFYSLRYSSTALERAEDPILNGSDR 113
+LA SV TD R+++LR YP APVTGFYS++Y ST LERAEDP+LNGSD
Sbjct 61 VLAASVPTDDRYKYLRTYPPNPAAPSSPLANAPVTGFYSMQYGSTGLERAEDPVLNGSDN 120
Query 114 RLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKIL 173
RLFGRR D +GRDPRGGNV +TINP +QQ +D + Y G+VVA+EPSTG+IL
Sbjct 121 RLFGRRFFDLVSGRDPRGGNVVSTINPVMQQVAYDELTAKGY---TGSVVAIEPSTGRIL 177
Query 174 ALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAAL 233
+VS+PSYDPN LASH+ QAW+ L +P PL NRA+S+TYPPGSTFKV+ TAAAL
Sbjct 178 TMVSTPSYDPNSLASHDGTETTQAWEALNADPEKPLINRAVSQTYPPGSTFKVVVTAAAL 237
Query 234 AAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRT 293
AAG T QLTAAP I LPG++ LENY G+ CG PT SLREAF +SCNTAFV+LG++T
Sbjct 238 AAGTTPDTQLTAAPQITLPGTSTTLENYNGSTCGGAPTASLREAFARSCNTAFVELGVKT 297
Query 294 GADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIA 353
GADA+ + A G+ P VA+ST+G IPD AALG +SIGQ+DVALTPL NA IA
Sbjct 298 GADAVGDQSSALGIGGQMPGVPFPVADSTIGSIPDDAALGQSSIGQRDVALTPLQNAMIA 357
Query 354 ATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQK 413
AT+ANGG+ M+P LV L+GPDL+N++TT + +A+S QVAA LT+LM+G+E +
Sbjct 358 ATVANGGVRMQPQLVSELQGPDLSNLATTNPVSEGQAMSSQVAATLTDLMIGSENNTSGE 417
Query 414 GAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGG 472
G IPGVQIASKTGTAEHGTDPR+TPPHAWYI FAPAQ P VA+AV+VE+G DR L+ATGG
Sbjct 418 GKIPGVQIASKTGTAEHGTDPRNTPPHAWYIGFAPAQNPTVAIAVIVEDGGDRALAATGG 477
Query 473 ALAAPIGRAVIEAALQG 489
++AAPIGRAVI A LQG
Sbjct 478 SVAAPIGRAVIAAGLQG 494
>gi|111020685|ref|YP_703657.1| peptidoglycan glycosyltransferase [Rhodococcus jostii RHA1]
gi|110820215|gb|ABG95499.1| peptidoglycan glycosyltransferase [Rhodococcus jostii RHA1]
Length=495
Score = 585 bits (1508), Expect = 5e-165, Method: Compositional matrix adjust.
Identities = 312/497 (63%), Positives = 376/497 (76%), Gaps = 11/497 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR+++ VM ++V LL NAT QV AD LRADPRN RVLLDEYSRQRGQI+A GQ
Sbjct 1 MNTPLRRVAIAVMVMVVALLANATYVQVIKADNLRADPRNSRVLLDEYSRQRGQISAAGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPE-------VYAPVTGFYSLRYSSTALERAEDPILNGSDR 113
+LA SV TD R+++LR YP APVTGFYS++Y ST LER+EDP+LNGSD
Sbjct 61 VLAASVPTDDRYKYLRTYPPNPAAPSSPLANAPVTGFYSMQYGSTGLERSEDPVLNGSDN 120
Query 114 RLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKIL 173
RLFGRR D +GRDPRGGNV TTINP +QQ +D + Y G+VVA+EPSTG+IL
Sbjct 121 RLFGRRFFDLVSGRDPRGGNVVTTINPVMQQVAYDQLTAKGY---TGSVVAIEPSTGRIL 177
Query 174 ALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAAL 233
+VS+PSYDPN LASH+ QAW+ L +P PL NRA+S+TYPPGSTFKV+ TAAAL
Sbjct 178 TMVSTPSYDPNSLASHDGTETTQAWEALNADPEKPLINRAVSQTYPPGSTFKVVVTAAAL 237
Query 234 AAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRT 293
AAG T QLTAAP I LPG++ LENY G+ CG PT SLREAF +SCNTAFV+LG++T
Sbjct 238 AAGTTPDTQLTAAPQITLPGTSTTLENYNGSTCGGAPTASLREAFARSCNTAFVELGVKT 297
Query 294 GADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIA 353
G DA+ + A G+ P VA+ST+G IPD AALG +SIGQ+DVALTPL NA IA
Sbjct 298 GTDAVSDQSSALGIGGQMPGVPFPVADSTIGSIPDDAALGQSSIGQRDVALTPLQNAMIA 357
Query 354 ATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQK 413
AT+ANGG+ M+P LV L+GPDL+N++TT + +A+S QVAA LT+LM+G+E +
Sbjct 358 ATVANGGVRMQPQLVSELQGPDLSNLATTNPVSEGQAMSSQVAATLTDLMIGSENNTSGE 417
Query 414 GAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGG 472
G IPGVQIASKTGTAEHGTDPR+TPPHAWYI FAPAQ P VA+AV+VE+G DR L+ATGG
Sbjct 418 GKIPGVQIASKTGTAEHGTDPRNTPPHAWYIGFAPAQNPTVAIAVIVEDGGDRALAATGG 477
Query 473 ALAAPIGRAVIEAALQG 489
++AAPIGRAVI A LQG
Sbjct 478 SVAAPIGRAVIAAGLQG 494
>gi|333917712|ref|YP_004491293.1| Penicillin binding protein transpeptidase domain-containing protein
[Amycolicicoccus subflavus DQS3-9A1]
gi|333479933|gb|AEF38493.1| Penicillin binding protein transpeptidase domain protein [Amycolicicoccus
subflavus DQS3-9A1]
Length=492
Score = 579 bits (1492), Expect = 5e-163, Method: Compositional matrix adjust.
Identities = 306/494 (62%), Positives = 372/494 (76%), Gaps = 8/494 (1%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN SLRR+SV VM +IV L+ N+ QVF AD LR++P N RVL+DE+SR RGQI+A GQ
Sbjct 1 MNTSLRRVSVAVMVMIVALIANSAYVQVFRADDLRSNPFNSRVLIDEFSRHRGQISAAGQ 60
Query 61 LLAYSVATDGRFRFLRVYPN----PEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLF 116
+LA SV +D RFR+ RVYP+ P +APVTGFYS++Y S LE AED +LNGSD RLF
Sbjct 61 VLASSVPSDTRFRYQRVYPDDATSPLAFAPVTGFYSMQYRSFGLENAEDALLNGSDDRLF 120
Query 117 GRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALV 176
GRRL D TGRDPRGGNV TT++P +QQ +D + Y GAVVA+ PSTG+ILA+
Sbjct 121 GRRLVDLITGRDPRGGNVVTTLDPFVQQVAYDQLSSRGY---NGAVVAITPSTGEILAMA 177
Query 177 SSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAG 236
S+PSYDPN LASH+ V ++AW+ L +P +PL NRA+ TYPPGSTFKV+TTAAALAAG
Sbjct 178 STPSYDPNPLASHDSAVSSEAWRALQADPDNPLVNRAVQNTYPPGSTFKVVTTAAALAAG 237
Query 237 ATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGAD 296
T +Q TAA LPG+T L+NYGGA CG T +L EAF SCNTAFV++GI TGA
Sbjct 238 VTPNDQFTAASQYTLPGTTTTLQNYGGATCGGGSTATLLEAFRLSCNTAFVEMGIETGAS 297
Query 297 ALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATI 356
ALRS A AFG D+ PL VA STVG I D A+LG +SIGQ+DVA+TPL NA +AATI
Sbjct 298 ALRSTAEAFGFDAEQSQIPLNVAPSTVGEIADDASLGQSSIGQRDVAVTPLQNAVLAATI 357
Query 357 ANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAI 416
ANGG+ M P LV +GPDL+ + +T + RAVSP VA + +LMV +E+ G++
Sbjct 358 ANGGVRMEPQLVHQRQGPDLSVLESTAPQEAGRAVSPAVAETIRQLMVASEQNTAGAGSV 417
Query 417 PGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALA 475
PGVQIASKTGTAEHGTDPR+TPPHAWYIAFAPA+ P+VAVAV+VE+G DR L+ATGG++A
Sbjct 418 PGVQIASKTGTAEHGTDPRNTPPHAWYIAFAPAENPQVAVAVIVEDGGDRALAATGGSVA 477
Query 476 APIGRAVIEAALQG 489
APIGRAVI AALQG
Sbjct 478 APIGRAVIRAALQG 491
>gi|54022046|ref|YP_116288.1| putative penicillin-binding protein [Nocardia farcinica IFM 10152]
gi|54013554|dbj|BAD54924.1| putative penicillin-binding protein [Nocardia farcinica IFM 10152]
Length=488
Score = 555 bits (1429), Expect = 9e-156, Method: Compositional matrix adjust.
Identities = 302/492 (62%), Positives = 369/492 (75%), Gaps = 8/492 (1%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR++V VM ++V LL NAT QVF AD R DPRN RVLLDEYSRQRGQI+AGG
Sbjct 1 MNTPLRRVAVAVMVMVVALLANATYVQVFKADDYRNDPRNTRVLLDEYSRQRGQISAGGT 60
Query 61 LLAYSVATDGRFRFLRVYP-NPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRR 119
+LA SV T+ R+++LR YP +P+ YAPVTG+Y+++ S LER EDP+LNGSD +LFGRR
Sbjct 61 VLASSVETEDRYKYLRTYPTDPQAYAPVTGYYTMQNGSGGLERFEDPLLNGSDSQLFGRR 120
Query 120 LADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSP 179
L D +GRDPRGGNV TT+NP +QQ ++ + Y G+VVA+EPSTGKIL +VS+P
Sbjct 121 LIDLVSGRDPRGGNVLTTLNPVMQQVAYEQLTAKGY---TGSVVAIEPSTGKILTMVSTP 177
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAG-AT 238
SYDPN+LA H+ +A + L +P P+ NRAIS+TYPPGSTFKV+ TAAALA G AT
Sbjct 178 SYDPNVLAGHDAAETTEALEALNSDPDKPMLNRAISQTYPPGSTFKVVVTAAALANGVAT 237
Query 239 ETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADAL 298
+Q TAAP I LPG+ LENY G+ CG PT SL +AF SCNTAFV+LG R GA AL
Sbjct 238 PEDQFTAAPNITLPGTATTLENYNGSSCGPGPTASLTDAFRLSCNTAFVELGQRVGAAAL 297
Query 299 RSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIAN 358
+ A AFG+ P P+ VAESTVGPIPD+AALG +SIGQ+DVALTPL NA IAATIAN
Sbjct 298 KDTAAAFGV-GPHNGIPMPVAESTVGPIPDNAALGQSSIGQRDVALTPLDNAVIAATIAN 356
Query 359 GGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPG 418
GG+ M PYLV +GPDL+ +S T +AVS QVA++LT +M+ +E G G
Sbjct 357 GGVRMEPYLVDQRQGPDLSELSKTKPVSVGQAVSAQVASQLTGMMIASE-ANTAGGNRAG 415
Query 419 VQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAAP 477
IASKTGTAEHGTDPR+TPPHAWYIAFAPAQ PK+A+AV+VE+G DR L+ATGG++AAP
Sbjct 416 YTIASKTGTAEHGTDPRNTPPHAWYIAFAPAQNPKIAIAVIVEDGGDRALAATGGSVAAP 475
Query 478 IGRAVIEAALQG 489
I RAV++A LQG
Sbjct 476 IARAVLDAGLQG 487
>gi|331694007|ref|YP_004330246.1| peptidoglycan glycosyltransferase [Pseudonocardia dioxanivorans
CB1190]
gi|326948696|gb|AEA22393.1| Peptidoglycan glycosyltransferase [Pseudonocardia dioxanivorans
CB1190]
Length=489
Score = 545 bits (1403), Expect = 1e-152, Method: Compositional matrix adjust.
Identities = 286/491 (59%), Positives = 345/491 (71%), Gaps = 8/491 (1%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN +RR++++VM +I+LLL N T QV A R DPRNQRVLL EYSRQRGQITA G+
Sbjct 1 MNTPVRRVAISVMVMILLLLANLTYVQVVKAGDYRNDPRNQRVLLAEYSRQRGQITADGK 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
+LA SVATD R RF R YPN +AP+TG+YS+ YSST +ERA D +LNG+D RLFGRRL
Sbjct 61 VLAQSVATDDRLRFQRQYPNGPAFAPLTGYYSVLYSSTGIERASDSVLNGTDDRLFGRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
+D TGRDP GGNV TI P +QQ +D M + GAVVAL P TG+ILA+ S+PS
Sbjct 121 SDLITGRDPSGGNVALTIQPTVQQVAYDQMTAKHFA---GAVVALRPQTGEILAMASTPS 177
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASP--LTNRAISETYPPGSTFKVITTAAALAAGAT 238
+DPN LASHN + Q AW+ DN A P L NRAISETYPPGSTFK+I TAAAL G T
Sbjct 178 FDPNPLASHNTKTQQDAWK--ADNAADPPVLPNRAISETYPPGSTFKLIDTAAALQNGYT 235
Query 239 ETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADAL 298
LTAAP I L G+ LEN+ G PCG T +LR+A +SCNTAF L G D L
Sbjct 236 PDSPLTAAPRITLTGTNTTLENFDGTPCGTGATATLRDALARSCNTAFATLAGALGPDVL 295
Query 299 RSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIAN 358
R A AFG+ + P+ V S++G +PD+AAL + IGQ+DV LTPL NA + A IAN
Sbjct 296 RKQAEAFGIGTSGMTIPMPVVPSSIGDLPDTAALEQSGIGQRDVRLTPLQNAMVVAAIAN 355
Query 359 GGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPG 418
GG M P+LV ++GP+L I TT + +AV VAA LT+LM+G+E Q G I G
Sbjct 356 GGTLMAPHLVKEIQGPELETIDTTKADRIGQAVPAGVAATLTDLMIGSENRTQGGGKIAG 415
Query 419 VQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAAP 477
VQIASKTGTAEHG DP++TPPH WY+AFAPAQ P VAVAV+VE+G DR L ATGG++AAP
Sbjct 416 VQIASKTGTAEHGNDPKNTPPHGWYVAFAPAQNPVVAVAVIVEDGGDRALEATGGSIAAP 475
Query 478 IGRAVIEAALQ 488
IGRAVI AL+
Sbjct 476 IGRAVIAEALR 486
>gi|296137779|ref|YP_003645022.1| penicillin-binding protein transpeptidase [Tsukamurella paurometabola
DSM 20162]
gi|296025913|gb|ADG76683.1| penicillin-binding protein transpeptidase [Tsukamurella paurometabola
DSM 20162]
Length=504
Score = 520 bits (1340), Expect = 2e-145, Method: Compositional matrix adjust.
Identities = 287/504 (57%), Positives = 359/504 (72%), Gaps = 16/504 (3%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN +RR+SV V+ L+V LL NAT QVF AD LR+DPRN+RVLLDEYSRQRG I AGGQ
Sbjct 1 MNTPIRRVSVVVVLLVVALLANATYVQVFKADELRSDPRNERVLLDEYSRQRGSILAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNP--EVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGR 118
++A SV TD R+++LR YP YAPVTG+YS+ YS+ ALE AE ILNGSD RLFGR
Sbjct 61 VMAQSVPTDDRYKYLRTYPKDLAPAYAPVTGYYSMVYSAGALEHAEGSILNGSDDRLFGR 120
Query 119 RLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGC--YGPCKGAVVALEPSTGKILALV 176
R+ D +GRDPRGGNV TTINP +Q+ ++ + C GPC G+VVA+EP TGKILA+V
Sbjct 121 RIVDTLSGRDPRGGNVVTTINPVMQRIAYERLISACGAKGPCHGSVVAMEPQTGKILAMV 180
Query 177 SSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAG 236
S+PSYDPN L+SH+P V + AWQ L +P P+ NRA S+ YPPGSTFKVITTAAAL+ G
Sbjct 181 STPSYDPNPLSSHDPSVVSAAWQNLTKDPDQPMLNRATSQLYPPGSTFKVITTAAALSQG 240
Query 237 --ATETEQLTAAPTIPLPGSTAQ-LENYGGAPCGDEP--TVSLREAFVKSCNTAFVQLG- 290
+LTA I LPG L+NY G C D TVSL +AF SCNTAFV L
Sbjct 241 RGIDLNTRLTADKQITLPGGGGTTLQNYAGMTCPDSSGGTVSLLQAFQYSCNTAFVDLST 300
Query 291 --IRTGADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLA 348
++ G +A++ MA FG++S P P PL V++S GP+ A +G ++IGQ DVALTPL
Sbjct 301 QKMQDGGEAIKQMANNFGVNSSPEPIPLPVSQSVTGPLSYPAQVGQSAIGQLDVALTPLQ 360
Query 349 NAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEK 408
NA IAAT+ANGGI M+PYLV SL+ PDL+ I+TT +Q +A+SP+VAA++ ELMV +E+
Sbjct 361 NAVIAATLANGGIRMQPYLVDSLQSPDLSTIATTSPKRQGQALSPEVAAQMRELMVASER 420
Query 409 VAQQKGAIPGVQIASKTGTAEHGTDPR-HTPPHAWYIAFAPAQAPKVAVAVLVENGADR- 466
KG+ V IASKTGTAEH + PHAWYI + P PKVAV+V++ENG ++
Sbjct 421 --NTKGSGGSVSIASKTGTAEHSEGQKGGEAPHAWYIGYGPVNDPKVAVSVIIENGGNQG 478
Query 467 LSATGGALAAPIGRAVIEAALQGE 490
ATGG+LAAPIGRAVI AA+ G+
Sbjct 479 EQATGGSLAAPIGRAVIGAAVNGQ 502
>gi|343928763|ref|ZP_08768208.1| penicillin-binding protein PbpA [Gordonia alkanivorans NBRC 16433]
gi|343761512|dbj|GAA15134.1| penicillin-binding protein PbpA [Gordonia alkanivorans NBRC 16433]
Length=499
Score = 493 bits (1268), Expect = 4e-137, Method: Compositional matrix adjust.
Identities = 270/501 (54%), Positives = 337/501 (68%), Gaps = 17/501 (3%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQIT-AGG 59
MN +R +S+ V+ +IV LL NAT QVF AD L+ DPRN RVLLDEYSRQRG IT A G
Sbjct 1 MNKPIRNVSLAVIVMIVALLANATYVQVFKADALKTDPRNNRVLLDEYSRQRGLITTADG 60
Query 60 QLLAYSVATDGRFRFLRVYPNP--EVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFG 117
++A SV D R +FLR YP E +A VTG+YS +Y + +E E+ ILNGSD RLFG
Sbjct 61 TVIALSVPIDSRLKFLRQYPREGAEAFAAVTGYYSFQYLANQIEHYENSILNGSDDRLFG 120
Query 118 RRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQG-CYGPCKGAVVALEPSTGKILALV 176
+R D F+GRDPRGGNV TTINP++QQA + AM G C GPC+GAVVAL+P+TGKILA+V
Sbjct 121 QRFMDMFSGRDPRGGNVVTTINPKVQQAAYRAMLNGPCDGPCRGAVVALQPNTGKILAMV 180
Query 177 SSPSYDPNLLASHNPEVQA---QAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAAL 233
S+PSYDPN LASH+ +V+ +AW R GD A P+ NRAIS+ YPPGSTFKV+T+AAAL
Sbjct 181 STPSYDPNKLASHDQDVRESSWEAWNRPGDT-AQPMLNRAISQLYPPGSTFKVVTSAAAL 239
Query 234 AAGATETEQLTAAPTIPLPGSTAQLENYGGAPC--GDEPTVSLREAFVKSCNTAFVQLGI 291
T +LTAAP+ PLPG+ L NYGG C TVSL AF SCNTAF +L
Sbjct 240 RDNITPGIRLTAAPSFPLPGTNVSLPNYGGETCPGSSGGTVSLETAFKYSCNTAFAELVT 299
Query 292 RTGADALRSM---ARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLA 348
+DA+ A FGLD P P+ V +STVGPIP L SIGQ+DV LTPL
Sbjct 300 EKMSDAIPKFTETASLFGLDQPGPDIPMPVVDSTVGPIPSLDVLAQASIGQRDVRLTPLQ 359
Query 349 NAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEK 408
NA IAAT+ANGG+ M+PYLV L+ DL + TT + ++P+ AA+LT +M+ +E+
Sbjct 360 NAMIAATVANGGVRMQPYLVDKLQSADLRTLQTTPPTTANKPITPEQAAELTSMMIESER 419
Query 409 VAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLS 468
GA V IASKTGTAE G+ P++WYIAF P+ ++AVAV+VENG
Sbjct 420 --STSGAGGPVTIASKTGTAESGSS--TDTPYSWYIAFGPSSNAQIAVAVVVENGQFGAD 475
Query 469 ATGGALAAPIGRAVIEAALQG 489
+ GG +AAPIGR VI + + G
Sbjct 476 SVGGTVAAPIGREVINSLVGG 496
>gi|262200071|ref|YP_003271279.1| penicillin-binding protein transpeptidase [Gordonia bronchialis
DSM 43247]
gi|262083418|gb|ACY19386.1| penicillin-binding protein transpeptidase [Gordonia bronchialis
DSM 43247]
Length=495
Score = 482 bits (1241), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 260/497 (53%), Positives = 335/497 (68%), Gaps = 13/497 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN +RR+SV V+ +I+ LL NAT QVF AD LR D RN R+L+DE+SRQRG ITAGG
Sbjct 1 MNKPIRRVSVAVIVMILALLANATYVQVFKADALRTDSRNDRILIDEFSRQRGLITAGGT 60
Query 61 LLAYSVATDGRFRFLRVYPNPEV--YAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGR 118
++A SV T GR +F R YP +AP+TG++S Y ++ +E AE+ ILNGSD RLFG+
Sbjct 61 VIARSVPTTGRLKFQREYPRETALAFAPITGYFSFIYGNSQIEDAENGILNGSDDRLFGQ 120
Query 119 RLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQG-CYGPCKGAVVALEPSTGKILALVS 177
R D +GRDPRGGNV TTI+PRIQQ ++A++ G C GPC+G++VAL+P+TGKILA+VS
Sbjct 121 RFMDMLSGRDPRGGNVVTTIDPRIQQLAYNALRNGPCDGPCRGSLVALQPNTGKILAMVS 180
Query 178 SPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGA 237
+PSYDPNLLASH+ + Q Q+W RL +P P N AI++ YPPGSTFKVIT+A+AL
Sbjct 181 TPSYDPNLLASHDSDAQIQSWNRLTGDPRQPTLNHAINQLYPPGSTFKVITSASALRDDV 240
Query 238 TETEQLTAAPTIPLPGSTAQLENYGGAPC--GDEPTVSLREAFVKSCNTAFVQLGIRTGA 295
T +LTAAP+I LPG++ LENY G C TV+L AF SCNTAF L
Sbjct 241 TTDVRLTAAPSIVLPGTSQTLENYDGETCPGSSGGTVTLETAFKFSCNTAFADLVTTKMK 300
Query 296 DA---LRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEI 352
DA AR FG+D P P+ V ESTVG I + L ++IGQ+DV LTPL NA I
Sbjct 301 DATTVFTDTARQFGIDQPGPDIPMSVTESTVGSIRSADVLAQSAIGQRDVRLTPLQNAVI 360
Query 353 AATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQ 412
AAT+ANGG+ MRPYLV L+ DL ++TT + +S A+ LT +MV +E+ +
Sbjct 361 AATVANGGVRMRPYLVDKLQAADLRTLNTTQPTTVNQPISADQASTLTRMMVLSEQ--ET 418
Query 413 KGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGG 472
+G+ V +ASKTGTAE DP T P WYIAF P+ +VA+AV+VENG + + + G
Sbjct 419 RGSGGAVSVASKTGTAELD-DPNAT-PVTWYIAFGPSTNAQVALAVVVENGRNGVKSVGA 476
Query 473 ALAAPIGRAVIEAALQG 489
L APIGR VI A + G
Sbjct 477 DL-APIGREVINAVVGG 492
>gi|302531408|ref|ZP_07283750.1| penicillin-binding protein 2 [Streptomyces sp. AA4]
gi|302440303|gb|EFL12119.1| penicillin-binding protein 2 [Streptomyces sp. AA4]
Length=487
Score = 478 bits (1229), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 247/493 (51%), Positives = 328/493 (67%), Gaps = 11/493 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQI-TAGG 59
MNA LR++ + ++ +IVLLL N T QV AD R DPRNQRVL DEYSRQRGQI T G
Sbjct 1 MNAPLRKVGMAMLVMIVLLLANDTYVQVIKADAYRTDPRNQRVLYDEYSRQRGQIVTPDG 60
Query 60 QLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRR 119
+LA + +F+F R Y + +YAPVTG+YS+ Y + LERAED +LNGSD RLF RR
Sbjct 61 TVLAGVKPSTDKFKFFRTYADGPMYAPVTGYYSINYGAGGLERAEDDVLNGSDPRLFVRR 120
Query 120 LADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSP 179
L+D TGRDPRGGNV TI+P++Q+A +D M + Y GAVVA+EP TG+ILA+VS+P
Sbjct 121 LSDMVTGRDPRGGNVKLTIDPKVQKAAYDLMTKRGY---TGAVVAMEPKTGRILAMVSTP 177
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPN LA+H + Q +AW +P +P+ NRAISE YPPGSTFK++T AAAL +G
Sbjct 178 SYDPNQLATHGTD-QNKAWSAYSSDPKNPMLNRAISENYPPGSTFKIVTAAAALESGIGP 236
Query 240 TEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
Q++ AP + LPG+ LENYGG C P + ++A SCN F + GAD ++
Sbjct 237 DTQVSTAPNVQLPGTNTTLENYGGETC---PGNTFKDALAHSCNVPFATFAGQLGADKMK 293
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
+ A FG+ P++V STVGP+ AL + IGQ+DV LTPL + ++AT+AN
Sbjct 294 AAAANFGIGQNDLTVPMRVVPSTVGPLDSPGALYQSGIGQRDVRLTPLQDCLLSATVANN 353
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQ--QRRAVSPQVAAKLTELMVGAEKVAQQKGAIP 417
G M+P L+ S+ PDL+ I Q + A+SP+ LT++M+ +E + G
Sbjct 354 GYAMKPQLIQSILAPDLSTIENVDPEQLTGKPALSPENDKILTDMMIASESFTKGGGKND 413
Query 418 GVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAA 476
++IASKTGTAEHG D ++T PHAWY AFAP+ P++AV+V+VENG +R L+ATGG +AA
Sbjct 414 ALKIASKTGTAEHGADSKNTAPHAWYTAFAPSDNPQIAVSVIVENGGNRGLAATGGTVAA 473
Query 477 PIGRAVIEAALQG 489
IGRA I A L G
Sbjct 474 EIGRAAIAARLGG 486
>gi|300781988|ref|YP_003762279.1| peptidoglycan glycosyl transferase [Amycolatopsis mediterranei
U32]
gi|299791502|gb|ADJ41877.1| peptidoglycan glycosyltransferase [Amycolatopsis mediterranei
U32]
gi|340523343|gb|AEK38548.1| peptidoglycan glycosyl transferase [Amycolatopsis mediterranei
S699]
Length=489
Score = 471 bits (1213), Expect = 9e-131, Method: Compositional matrix adjust.
Identities = 245/494 (50%), Positives = 325/494 (66%), Gaps = 11/494 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQIT--AG 58
MN LR++ + ++ ++VLLL NAT QV AD R D RN RVL DE++RQRG+I A
Sbjct 1 MNTPLRKVGMAMLVMVVLLLANATYIQVVKADDYRTDSRNARVLYDEFARQRGKIVSQAN 60
Query 59 GQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGR 118
G++LA ++ +++++R Y + +YAPVTG+YS+ Y + LERAED +LNGSD RLF R
Sbjct 61 GEVLAGINPSNDKYKYIRTYADGPMYAPVTGYYSINYGAGGLERAEDDVLNGSDPRLFVR 120
Query 119 RLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSS 178
RL+D TGRDP GGNV TI+P +Q+A +D M Q Y GAVVA+EPSTG+ILA+VS+
Sbjct 121 RLSDMVTGRDPSGGNVRLTIDPAVQKAAYDLMTQKGY---TGAVVAMEPSTGRILAMVST 177
Query 179 PSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGAT 238
PSYDPN LASH + QA AW +P P+ NRAISETYPPGST K++T AA L G
Sbjct 178 PSYDPNQLASHTSKAQADAWNANNKDPKKPMLNRAISETYPPGSTMKLVTAAAVLEDGKG 237
Query 239 ETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADAL 298
Q++ P LPG+ LENYGG C P + ++A SCN F + + G D +
Sbjct 238 PDTQVSQEPNTKLPGTNTTLENYGGETC---PGNTFKDALAHSCNVPFAEFAGQLGPDKM 294
Query 299 RSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIAN 358
+ A FG+ P++VA STVGP+ AL + IGQ+DV LTPL + +AAT+AN
Sbjct 295 KKTAANFGIGQTDLTVPMKVAPSTVGPLDSQGALYQSGIGQRDVRLTPLQDCLLAATVAN 354
Query 359 GGITMRPYLVGSLKGPDLANIS--TTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAI 416
GG+ M+P LV S+ PDL+ I + A+S AA L ++M+ +E + G
Sbjct 355 GGMAMKPQLVQSVLAPDLSTIEDYSPTELTGTAALSSSNAAILKDMMIASEGFTKGGGKR 414
Query 417 PGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALA 475
V+IASKTGTAEHGTD ++T PHAWY AFAPA +P++AVAV+VE+G +R L+ATGG +A
Sbjct 415 ADVKIASKTGTAEHGTDSKNTAPHAWYTAFAPADSPQIAVAVIVEDGGNRGLAATGGTVA 474
Query 476 APIGRAVIEAALQG 489
A IGRA I A L G
Sbjct 475 AEIGRAAINAKLGG 488
>gi|325000092|ref|ZP_08121204.1| penicillin-binding protein [Pseudonocardia sp. P1]
Length=479
Score = 471 bits (1213), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 246/452 (55%), Positives = 304/452 (68%), Gaps = 3/452 (0%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN +RR+++ VM +IV LL N T QV A R DPRNQR +DEYSRQRGQITAGGQ
Sbjct 1 MNRPVRRVALAVMVMIVALLANITYVQVVVAGQYRDDPRNQRSQIDEYSRQRGQITAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
+LA SV +DGR R+ R YP +AP+TGF S Y ALER+ D +LNG+D RLF RRL
Sbjct 61 VLAQSVDSDGRLRYARQYPEGPAFAPITGFLSTVYGKGALERSTDDVLNGTDDRLFVRRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
+D TGRDP GGNV TT++P +Q+ +D +Q Y GAVVALEP TG ILA+ S+PS
Sbjct 121 SDLITGRDPAGGNVVTTVDPDVQRVAYDGLQSRGY---TGAVVALEPQTGNILAMASTPS 177
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPN LA+ + Q AW+ + +PLTNRAI+E PPGSTFK++TTAAAL G T
Sbjct 178 YDPNRLAAPDAAEQQAAWREYNNAELNPLTNRAINEIEPPGSTFKLVTTAAALQNGYTPE 237
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
+LTAA I L ST LENY G+ CG T SLREA +SCNTAF QLG GAD LR+
Sbjct 238 SRLTAARNIQLADSTTTLENYNGSQCGGGDTASLREALARSCNTAFAQLGQELGADKLRA 297
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A AFG+ P+ V S VGP+ D + ++IGQ+DV LTP+ A I +IANGG
Sbjct 298 QAEAFGIGRSDLQIPMPVTASQVGPMSDVPSTQQSAIGQRDVRLTPMQLAMIGGSIANGG 357
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
TM P+L+ ++G L + TT + R++ VA LT+LM+G+E Q G I GVQ
Sbjct 358 QTMAPHLIKEIQGATLDVVDTTEPDRMARSMPGDVARTLTDLMIGSEDRTQGGGKITGVQ 417
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAP 452
IASKTGTAEHGTDP++TPPHAWY+AFAPA P
Sbjct 418 IASKTGTAEHGTDPKNTPPHAWYVAFAPADNP 449
>gi|257054123|ref|YP_003131955.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Saccharomonospora
viridis DSM 43017]
gi|256583995|gb|ACU95128.1| cell elongation-specific peptidoglycan D,D-transpeptidase [Saccharomonospora
viridis DSM 43017]
Length=489
Score = 464 bits (1194), Expect = 1e-128, Method: Compositional matrix adjust.
Identities = 249/497 (51%), Positives = 322/497 (65%), Gaps = 17/497 (3%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAG-- 58
MN LR++ VT++ ++ LLL+N T QV AD R D RN RVL DEYSR+RG+IT+
Sbjct 1 MNTPLRKVGVTMLVMVTLLLVNTTYIQVVKADDYRTDGRNTRVLFDEYSRERGKITSADA 60
Query 59 GQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGR 118
GQ+LA TD ++ R Y N +YAPVTG+YS+ Y ++ LE+ + LNGSD RL R
Sbjct 61 GQVLASIEPTDNTLKYRRTYLNGPMYAPVTGYYSVNYGASGLEQVHNDFLNGSDSRLLVR 120
Query 119 RLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSS 178
RL+D TGRD RGGNV TI P +Q+ + M + Y +GAVVAL+P TG ILA+VS+
Sbjct 121 RLSDLITGRDTRGGNVRLTIKPAVQETAYKMMAERNY---RGAVVALDPKTGDILAMVST 177
Query 179 PSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGAT 238
PSYDPN LASH+ + Q +AW+ ++ A+P+ NRAI ETYPPGSTFK++TTAAAL GAT
Sbjct 178 PSYDPNKLASHSSDEQQKAWKAYTEDDANPMLNRAIRETYPPGSTFKIVTTAAALENGAT 237
Query 239 ETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADAL 298
++T + LP + LEN+ GA C P +L++A SCNTAF L GAD L
Sbjct 238 ADTRITPKARVTLPNTKTTLENFNGATC---PGNTLKDALAYSCNTAFSVLADELGADKL 294
Query 299 RSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIAN 358
A FG+ P+ V S +GP+ SAAL + IGQ+DV LTPL +A +AAT+AN
Sbjct 295 WETAANFGIGMNDLTIPMSVVRSDLGPLESSAALYQSGIGQRDVRLTPLQDALLAATVAN 354
Query 359 GGITMRPYLVGSLKGPDLANI-----STTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQK 413
G+ MRP LV L DL+ + G A + QV LT++M+ +E Q
Sbjct 355 DGVAMRPRLVKELLAADLSTVEEFSPEELTGDPALSAANAQV---LTDMMIASEANTQGG 411
Query 414 GAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGG 472
G P ++IASKTGTAEHGTDP+ TPPHAWY AFAP P+VAVAV+VE+G +R L+ATG
Sbjct 412 GKDPSLKIASKTGTAEHGTDPKATPPHAWYTAFAPHDDPQVAVAVIVESGGNRGLAATGA 471
Query 473 ALAAPIGRAVIEAALQG 489
+AA IGRA I AAL G
Sbjct 472 TVAAEIGRATIAAALGG 488
>gi|326383935|ref|ZP_08205619.1| penicillin-binding protein transpeptidase [Gordonia neofelifaecis
NRRL B-59395]
gi|326197394|gb|EGD54584.1| penicillin-binding protein transpeptidase [Gordonia neofelifaecis
NRRL B-59395]
Length=500
Score = 456 bits (1174), Expect = 3e-126, Method: Compositional matrix adjust.
Identities = 254/498 (52%), Positives = 330/498 (67%), Gaps = 17/498 (3%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAG-G 59
MN ++++++ + ++V LL NAT QVF AD LR+D RN RVLLDEY+RQRG I A G
Sbjct 1 MNRPIQKVALACIIMVVALLANATYVQVFKADKLRSDTRNSRVLLDEYARQRGVIVAADG 60
Query 60 QLLAYSVATDGRFRFLRVYP-NPEVYAPVTGFYSLRY-SSTALERAEDPILNGSDRRLFG 117
+LA S+ TD RF++LR YP +P+ ++PVTG++S Y + +E AED ILNG+D RLF
Sbjct 61 TVLAESIPTDNRFKYLRRYPTDPKAFSPVTGYFSFVYRADRGIEYAEDSILNGNDDRLFT 120
Query 118 RRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQ-GCYGPCKGAVVALEPSTGKILALV 176
+R D F+GRDPRGGNV TTI+P +Q+ + + GC GPC+GAVVALEPSTGKILA+
Sbjct 121 QRFMDMFSGRDPRGGNVVTTIDPNLQRVAYRELTNAGCDGPCRGAVVALEPSTGKILAMA 180
Query 177 SSPSYDPNLLASHNPEVQAQAWQRLG-DNPASPLTNRAISETYPPGSTFKVITTAAALAA 235
S+PSYDPN LA+ + +AW++ ++ P+TNRAI YPPGSTFKV+TTA AL A
Sbjct 181 STPSYDPNALATQDFGQAEKAWEKYNAEDNGDPMTNRAIDALYPPGSTFKVVTTATALKA 240
Query 236 GATETEQLTAAPTIPLPGSTAQLENYGGAPC--GDEPTVSLREAFVKSCNTAFVQLGIR- 292
G T +LTAA I LP STA L N G+ C TVSL +AF SCNTAF QL
Sbjct 241 GLTPDVRLTAASQIQLPDSTATLSNDSGSTCPGSTNGTVSLTQAFEYSCNTAFAQLMTEK 300
Query 293 ---TGADALRSMARAFGLDSPPRPTPLQVAESTVGPI-PDSAALGMTSIGQKDVALTPLA 348
++ S A+ FG+ P P+ VA+STVG I D AAL ++IGQ+DV LT L
Sbjct 301 VPGNASEEFTSTAKQFGVGEDPPGIPMDVAKSTVGDIGNDKAALAQSAIGQRDVRLTVLE 360
Query 349 NAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEK 408
NAEIAAT+ANGG+ MRPY+V L+ DL ISTT R ++ A ++T++MV +E
Sbjct 361 NAEIAATVANGGVRMRPYVVDKLQTADLRTISTTAPSAFNRPLTADQADQITDMMVKSE- 419
Query 409 VAQQKGAIPGVQIASKTGTAEHG-TDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRL 467
Q A IASKTGTAEH T P+AWYIAF+P+ ++AVAV++ENG
Sbjct 420 ---QNTANAQAGIASKTGTAEHSDTSEGGETPYAWYIAFSPSSNARIAVAVIIENGNRGQ 476
Query 468 SATGGALAAPIGRAVIEA 485
++ GG AAPIGRAV+ A
Sbjct 477 NSYGGLAAAPIGRAVMNA 494
>gi|134096664|ref|YP_001102325.1| peptidoglycan glycosyltransferase [Saccharopolyspora erythraea
NRRL 2338]
gi|291009310|ref|ZP_06567283.1| peptidoglycan glycosyltransferase [Saccharopolyspora erythraea
NRRL 2338]
gi|133909287|emb|CAL99399.1| peptidoglycan glycosyltransferase [Saccharopolyspora erythraea
NRRL 2338]
Length=483
Score = 452 bits (1164), Expect = 5e-125, Method: Compositional matrix adjust.
Identities = 241/490 (50%), Positives = 318/490 (65%), Gaps = 10/490 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN LRR+++ +M ++VLL+ NAT QV AD LR P N R L DEYSRQRGQI AGGQ
Sbjct 1 MNKPLRRVALAMMVMVVLLMGNATYVQVIKADELRDGPGNTRTLYDEYSRQRGQIIAGGQ 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
LA SV TD + ++LR YP +APVTG+YS Y + +ERA+ +LNG+D L RL
Sbjct 61 SLANSVETDDKLKYLRTYPEGPAFAPVTGYYSFVYGANGVERAQMNLLNGTDDSLAFDRL 120
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
+D TG PRGG+V+ TINP +Q+ ++ + + +G+VVAL+P TG ILA+ ++PS
Sbjct 121 SDMITGEPPRGGDVELTINPAMQRVAYEQLTSKGF---QGSVVALDPKTGAILAMANAPS 177
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
YDPN LASH W P+ NRA+SE YPPGSTFK+ITTAAAL G
Sbjct 178 YDPNKLASHLKSEALAGWNEASQAEGDPMLNRAVSEIYPPGSTFKLITTAAALQNGYNAN 237
Query 241 EQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRS 300
Q+T AP+I LPG+ L NYGG C +L +A SCNTAF ++ + GAD +R
Sbjct 238 SQVTDAPSITLPGTRTPLPNYGGNTCKGN---TLTKALAHSCNTAFAEIAGKLGADKMRE 294
Query 301 MARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGG 360
A AFG + P++ A+S +GP+ D+ +L + IGQ+DV +TPL NA + + IANGG
Sbjct 295 TAAAFGFGQDLQ-VPMRAAKSDLGPMSDAPSLYQSGIGQRDVRVTPLQNAMMVSAIANGG 353
Query 361 ITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQ 420
M+P LV PD + I+ + +AVSP VA + ++M+ +E+ + G I GV+
Sbjct 354 KLMKPELVRRTTAPDKSVINEMQPEELNQAVSPDVARTIRDMMLQSEQNTKGDGKISGVE 413
Query 421 IASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAAPIG 479
IASKTGTA+HG DP PH WY+AFAPA+AP +AVAV+VENG D ATGG++AAPIG
Sbjct 414 IASKTGTAQHG-DPDDK-PHGWYVAFAPAEAPSIAVAVIVENGGDEGAEATGGSIAAPIG 471
Query 480 RAVIEAALQG 489
RAVI A LQG
Sbjct 472 RAVIRAGLQG 481
>gi|258650348|ref|YP_003199504.1| peptidoglycan glycosyltransferase [Nakamurella multipartita DSM
44233]
gi|258553573|gb|ACV76515.1| Peptidoglycan glycosyltransferase [Nakamurella multipartita DSM
44233]
Length=493
Score = 451 bits (1159), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 251/494 (51%), Positives = 315/494 (64%), Gaps = 8/494 (1%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITA-GG 59
M LRR+ V+ ++VLLL N TQV AD RADP N+R L+ EYSRQRGQITA GG
Sbjct 1 MKRPLRRLGTAVIVMVVLLLANIAYTQVIKADDYRADPNNKRTLVAEYSRQRGQITAAGG 60
Query 60 QLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRR 119
+LA S D ++ + RVYP YA G+YS+RY T +ER ++ IL+G L +
Sbjct 61 VVLARSDPVDDQYSYQRVYPEGAAYAHPVGYYSMRYGPTGIERNQNEILSGEAPELIAGQ 120
Query 120 LADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSP 179
L+D TGRDPRGGNV T+ P +QQA + AM Y GAVVA+EPSTG ILA+VS+P
Sbjct 121 LSDLITGRDPRGGNVQLTLVPAVQQAAYSAMADKGY---VGAVVAMEPSTGNILAMVSTP 177
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPN LASH+ Q QA+ L + SPL NRA+S YPPGSTFK++ AAAL G T
Sbjct 178 SYDPNPLASHSDATQRQAYNDLVNADPSPLLNRAVSAVYPPGSTFKLVIAAAALQNGYTP 237
Query 240 TEQLTAAPTIPLPGST-AQLENYGGAPCGDE--PTVSLREAFVKSCNTAFVQLGIRTGAD 296
+T PTI LPG+ A L N+GG C D V+L +A SCNTAF ++ + GA
Sbjct 238 QTTVTGEPTITLPGTGGATLSNFGGETCADAGGEDVTLTQALAHSCNTAFAEVAMSLGAP 297
Query 297 ALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATI 356
+R A A G+ + V S +G IPD+AAL T IGQ+DVA+TP A + ATI
Sbjct 298 VVRKQAEALGVTGDGVDVGMDVVGSRLGDIPDTAALAQTGIGQRDVAVTPFEMAWVTATI 357
Query 357 ANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAI 416
AN G M P+L+ PDL IS T +A+ VA +L ++M+ +EK G+I
Sbjct 358 ANRGDQMAPHLIAQTTKPDLTVISQTQPESLGQAIPIPVADQLKDMMIESEKQTPLSGSI 417
Query 417 PGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALA 475
+ IASKTGTAEHGTDP++TPPHAWY+AFAPA PKVAVAVLVENG D + ATG +A
Sbjct 418 ADLVIASKTGTAEHGTDPKNTPPHAWYVAFAPADNPKVAVAVLVENGGDLGVEATGARVA 477
Query 476 APIGRAVIEAALQG 489
P+GR+VI AAL G
Sbjct 478 GPVGRSVIAAALAG 491
>gi|158312001|ref|YP_001504509.1| peptidoglycan glycosyltransferase [Frankia sp. EAN1pec]
gi|158107406|gb|ABW09603.1| Peptidoglycan glycosyltransferase [Frankia sp. EAN1pec]
Length=482
Score = 439 bits (1128), Expect = 7e-121, Method: Compositional matrix adjust.
Identities = 244/492 (50%), Positives = 313/492 (64%), Gaps = 19/492 (3%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN +R++++ M L LL+NA QV D L+ +P N R + + RQRG I AG
Sbjct 1 MNTPVRKVALACMVLFAALLVNANWIQVGQVDRLKTEPTNARQITERLERQRGGIIAGET 60
Query 61 LLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRL 120
+LA SV D ++F R YPN ++YA +TG+Y+L ++++ LER+ED L+G D RL R+
Sbjct 61 VLATSVPVDDEYKFQRQYPNGQLYANLTGYYTL-FTASGLERSEDVFLSGDDDRLLASRV 119
Query 121 ADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPS 180
D FTG + RGG V TTI+P +QQA DA+ +GAVVAL+PSTG ILA+V++PS
Sbjct 120 TDLFTGEERRGGTVVTTIDPHVQQAAMDALDG-----RRGAVVALDPSTGAILAMVTTPS 174
Query 181 YDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATET 240
+DPN LA+H+ A+Q+L N PL NRA +TYPPGSTFK+IT AAALA G TE
Sbjct 175 FDPNTLATHDESAATDAYQQLSTNSDQPLLNRAAQQTYPPGSTFKLITAAAALAHG-TEP 233
Query 241 EQLTAAP-TIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALR 299
E AAP + LP ST L N+GG CGD T +L A SCNTAF QLGI G D LR
Sbjct 234 ETRVAAPDELTLPQSTTVLPNFGGERCGDGRTDTLTHALTISCNTAFAQLGIDLGDDVLR 293
Query 300 SMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANG 359
+ A AFG +S PLQ A S D A ++IGQ DV +TPL AE+ A I NG
Sbjct 294 AQAEAFGFNSTIEDFPLQQARSVFPSDLDGAQTAQSAIGQFDVRVTPLQMAEVVAAIGNG 353
Query 360 GITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQ----QKGA 415
G+ M+PYLV L+GPDL + T + + VSP+VAAKLT +M E V +K
Sbjct 354 GVRMKPYLVSELRGPDLKRLDHTEPTELNKPVSPEVAAKLTTMM---ESVVTSGSGRKAQ 410
Query 416 IPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALA 475
I GV +A KTGTAEHGT PPH W++ FAPA APKVAVAV+VE+G ATGGA+A
Sbjct 411 IDGVDVAGKTGTAEHGTGE---PPHTWFVGFAPASAPKVAVAVIVEDGGGEF-ATGGAVA 466
Query 476 APIGRAVIEAAL 487
AP+ + V++AAL
Sbjct 467 APVAKEVMQAAL 478
>gi|296392807|ref|YP_003657691.1| penicillin-binding protein transpeptidase [Segniliparus rotundus
DSM 44985]
gi|296179954|gb|ADG96860.1| penicillin-binding protein transpeptidase [Segniliparus rotundus
DSM 44985]
Length=506
Score = 419 bits (1077), Expect = 5e-115, Method: Compositional matrix adjust.
Identities = 249/508 (50%), Positives = 319/508 (63%), Gaps = 29/508 (5%)
Query 1 MNASLRRISVTVMALIVLLLL-NATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGG 59
MN SLRRI + + L L+L+ N T Q + + LR + N+R L EYS RG+ITAGG
Sbjct 1 MNTSLRRIGLVLAWLAPLVLIANITYVQAWWSIDLRNNAHNKRALYREYSEPRGKITAGG 60
Query 60 QLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRR 119
LLAYS +D RF +LR Y P YAPVTG+YS+ + T LE E+ +LNG D RLF +R
Sbjct 61 TLLAYSDPSDDRFHYLRKYNEPLAYAPVTGYYSMLFDRTELELKENDVLNGKDSRLFSQR 120
Query 120 LADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSP 179
L DF RGG V+TTI+ ++Q+ + + GC G C G+VVAL+P G ILA+ SSP
Sbjct 121 LLDFLASHGQRGGMVNTTIDAKLQEVAYRQLSSGCPGGCVGSVVALDPKNGAILAMASSP 180
Query 180 SYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATE 239
SYDPN L+SHN + A+ ++ L +P PL NRAI + YPPGSTFK++TTAAAL+ G +
Sbjct 181 SYDPNQLSSHNLDETAKYYESLSHDPNQPLLNRAIEQAYPPGSTFKIVTTAAALSYGISP 240
Query 240 TEQLTAAPTIPLPGS-TAQLENYGGAPCGDE--PTVSLREAFVKSCNTAFVQLGIRT--G 294
+LTAA +IPLPG+ A + NYGG C D V+LR+AF SCNTAFVQL +
Sbjct 241 DLKLTAAGSIPLPGTANATIPNYGGQACPDSIGGEVTLRQAFAYSCNTAFVQLMTQKIPK 300
Query 295 ADA-LRSMARAFGLDSPPRPTPLQVAEST-VGP------IPDSAALGMTSIGQKDVALTP 346
ADA LR MA L + + P+ V S V P D AALG + IGQ+DV LTP
Sbjct 301 ADAVLRGMATQLQL-TEKQSIPMSVVPSQLVSPEEPDLLQKDPAALGQSVIGQRDVQLTP 359
Query 347 LANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAV-----SPQVAAKLTE 401
L NAEI A +ANGG RP++V GPDL +S Q R+V PQ A LT+
Sbjct 360 LMNAEITACVANGGFLARPFVVRQEFGPDLKPLSDD---QTTRSVLVPAMRPQTAKTLTD 416
Query 402 LMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVE 461
MV +E+ + KG P + IASKTGTA+ +P + P+ WY+AFAPA P +A+AVLVE
Sbjct 417 FMVESERRSGGKGKDPKLDIASKTGTAD---NPHNKSPYTWYVAFAPASRPVIALAVLVE 473
Query 462 NGADRL--SATGGALAAPIGRAVIEAAL 487
G+D L ATG ++A PIGRAVI AL
Sbjct 474 -GSDALGPGATGASVAGPIGRAVIAQAL 500
>gi|334564968|ref|ZP_08517959.1| putative penicillin-binding protein 2 [Corynebacterium bovis
DSM 20582]
Length=484
Score = 419 bits (1076), Expect = 8e-115, Method: Compositional matrix adjust.
Identities = 242/491 (50%), Positives = 312/491 (64%), Gaps = 13/491 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQ 60
MN S+R ++V L+V+L +N T Q F D L +P N R + SR+RGQIT GGQ
Sbjct 1 MNRSIRAVTVFSFVLVVILGVNLTWVQGFRTDSLAENPLNGRRFYELKSRERGQITTGGQ 60
Query 61 LLAYSVAT-DGRFRFLRVYP-NPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGR 118
+LA SVA DG + R YP +P VY VTG+ S ++ + LE +++ IL G+D LF
Sbjct 61 VLARSVADHDGLYE--REYPTDPAVYGAVTGYLSDQFGAAGLEASQNEILMGTDDSLFTT 118
Query 119 RLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSS 178
R+ D TG+ RG NVD TI P +QQ +D + Y GAVVAL PSTG++LA+ SS
Sbjct 119 RVWDTVTGKKVRGANVDLTIEPSVQQVAYDQLTSRGY---SGAVVALRPSTGEVLAMASS 175
Query 179 PSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGAT 238
P+++P + + A+A+ L ++P++PL NRA +T PPGSTFK+ITTAAAL G +
Sbjct 176 PTFNPASVTQPDSAAAAEAFTALQNDPSAPLLNRATQQTQPPGSTFKLITTAAALNEGES 235
Query 239 ETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADAL 298
LTAAP I LP + LENY G CG SLR AF SCNTAFV L R G
Sbjct 236 ADTMLTAAPQITLPDTATTLENYDGTRCGSGSEASLRLAFELSCNTAFVDLVGRHGDKPF 295
Query 299 RSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIAN 358
R +A FG+ L V ST+GPIPD AAL ++IGQ+DVALTPL NA IAATIAN
Sbjct 296 RDVAAGFGIGEGSDALGLPVQPSTIGPIPDDAALAQSAIGQRDVALTPLQNAIIAATIAN 355
Query 359 GGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPG 418
G M P+L+ + GPDL + T + +A+ A++LT+LMVGAE+ + +
Sbjct 356 KGKRMEPHLIRQVTGPDLTPLEVTQPKEVTQAIPEGTASQLTDLMVGAERHSSGR----- 410
Query 419 VQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAAP 477
IASKTGTAEHG D R + PHAWY+AF P+Q VAVAVLVENG DR ATGG++AAP
Sbjct 411 TDIASKTGTAEHGEDSRDSNPHAWYVAFGPSQEADVAVAVLVENGGDRGQEATGGSVAAP 470
Query 478 IGRAVIEAALQ 488
IGRAVI+AA++
Sbjct 471 IGRAVIDAAVK 481
>gi|340793020|ref|YP_004758483.1| penicillin-binding protein [Corynebacterium variabile DSM 44702]
gi|340532930|gb|AEK35410.1| penicillin-binding protein [Corynebacterium variabile DSM 44702]
Length=470
Score = 415 bits (1066), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 236/478 (50%), Positives = 305/478 (64%), Gaps = 16/478 (3%)
Query 15 LIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATDGRFRF 74
LI +LL+N T Q F D + RN R + S RGQITAGGQ+LA S + + +
Sbjct 2 LIAILLVNLTWIQGFQTDTYAHNSRNARQYFETKSVPRGQITAGGQILAQSTPDEDGY-Y 60
Query 75 LRVYPN-PEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGN 133
R YP P Y V G+ S RY + +E++++ IL+G+D L ++ D TG++ RG N
Sbjct 61 QRAYPTAPAAYGSVIGYLSDRYGAAGIEQSQNSILDGTDDSLLPSQVWDTLTGKEKRGAN 120
Query 134 VDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEV 193
V+ T+NP +QQ +D + Y G+VVAL PSTG+IL + S+PSYDP ++S + E
Sbjct 121 VELTLNPTVQQTAYDQLSNAGY---SGSVVALRPSTGEILGMASTPSYDPEAVSSSDSEA 177
Query 194 QAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPG 253
++ L + +PL NR+ +T PPGSTFK+ITTA ALA G +T AP I LP
Sbjct 178 ADATFEALQSDENAPLLNRSTQQTQPPGSTFKLITTATALADGDNADTMVTGAPQITLPD 237
Query 254 STAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPR- 312
T LENYGG+ CG + V+LR AF KSCNTAFV L R G DA + A+AFG+D
Sbjct 238 GTTTLENYGGSSCGADQ-VTLRTAFEKSCNTAFVDLSQRHGTDAFKDTAKAFGIDEENTF 296
Query 313 -PTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSL 371
L V +STVG IPD++AL ++IGQ+DVALTPL NA IAATIANGG M P+LV +
Sbjct 297 GHVGLPVQDSTVGEIPDASALAQSAIGQRDVALTPLQNAVIAATIANGGKRMEPHLVKEV 356
Query 372 KGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPGVQIASKTGTAEHG 431
G DL + TT + +A+ +VA++LT+LM AE A G G +ASKTGTAEHG
Sbjct 357 TGADLKPLETTKPKEVNQAIDGEVASQLTDLMKDAETYA---GGTMG--LASKTGTAEHG 411
Query 432 TDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADR-LSATGGALAAPIGRAVIEAALQ 488
D R++ PHAWY+AFAP VAVAVLVENG DR +ATGGA+A PIGRAVI AALQ
Sbjct 412 EDSRNSNPHAWYVAFAP--EGDVAVAVLVENGGDRGQAATGGAVAGPIGRAVIRAALQ 467
>gi|256374183|ref|YP_003097843.1| peptidoglycan glycosyltransferase [Actinosynnema mirum DSM 43827]
gi|255918486|gb|ACU33997.1| Peptidoglycan glycosyltransferase [Actinosynnema mirum DSM 43827]
Length=488
Score = 413 bits (1062), Expect = 3e-113, Method: Compositional matrix adjust.
Identities = 237/492 (49%), Positives = 306/492 (63%), Gaps = 12/492 (2%)
Query 1 MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAG-G 59
MN LRR+ V +M ++++LL NAT QV A+ R P N R L+ SR+RG I A G
Sbjct 1 MNTPLRRVGVAMMVMMMILLANATYVQVIKAEEYRTSPYNVRGRLEMLSRERGSIIAADG 60
Query 60 QLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRR 119
LA + R+ RVY N +Y PVTG+ S Y S LERAE+ +L G D RLF RR
Sbjct 61 TPLATVTPIPDKDRWQRVYANGPMYLPVTGYLSNTYGSNGLERAENDLLIGEDDRLFTRR 120
Query 120 LADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSP 179
L+D TGRDP+G ++ TINP+ QQA ++A+ G GAVVA+EP TGKILALVS+P
Sbjct 121 LSDLITGRDPKGASLQVTINPKAQQAAYEAL-----GDRTGAVVAIEPKTGKILALVSTP 175
Query 180 SYDPNLLASHNPEVQAQAWQRLG-DNPASPLTNRAISETYPPGSTFKVITTAAALAAGAT 238
S+DPN LA + + + W + DNPA P NRA+S TYPPGSTFK++ AA L G
Sbjct 176 SFDPNKLAVQDGQEEKAYWAEVTQDNPAQPDANRALSWTYPPGSTFKLVVAAAGLEEGMD 235
Query 239 ETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADAL 298
++ Q+ A PTI LPG+ +L N+ G C + +L +A +SCNTAF +L G L
Sbjct 236 KSTQVDARPTITLPGTNTELPNFNGTNCNNGVNATLEQAIAQSCNTAFAKLAGDLGTAKL 295
Query 299 RSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIAN 358
R A FG+D P+ A ST+GP+PD AAL T IGQ+DV +TPLANA + ATIAN
Sbjct 296 REQAAKFGIDDQKYQVPMTTAASTLGPVPDQAALFQTGIGQRDVQVTPLANAVMVATIAN 355
Query 359 GGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGAIPG 418
G+ M+PYLV + G D A + T + A+S A LTE+M+ AE A G +
Sbjct 356 KGVRMKPYLVDKILGTDTATVDETKPDEVDEAISEDSAQLLTEMMIAAENKAGGAGKLSN 415
Query 419 VQIASKTGTAEHGTDPRHTP-PHAWYIAFAPAQAPKVAVAVLVEN--GADRLSATGGALA 475
+QIASKTGTAE G TP PHAWY AFAPA P++A+AV+VE G +ATG +A
Sbjct 416 IQIASKTGTAEWGVG--STPNPHAWYTAFAPANDPQIALAVIVEKSGGKRDGAATGSLVA 473
Query 476 APIGRAVIEAAL 487
AP+GRAVI + L
Sbjct 474 APVGRAVISSYL 485
>gi|317507737|ref|ZP_07965442.1| penicillin binding protein transpeptidase domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
gi|316253990|gb|EFV13355.1| penicillin binding protein transpeptidase domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
Length=508
Score = 413 bits (1061), Expect = 4e-113, Method: Compositional matrix adjust.
Identities = 241/501 (49%), Positives = 322/501 (65%), Gaps = 23/501 (4%)
Query 5 LRRISVTVMALIVLLLL-NATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQLLA 63
+RR+ + + L L+L+ N T Q + + LR + +N+R L EYS RG+ITA G LLA
Sbjct 1 MRRVGLVLAWLAPLILIANLTFVQAWWSIDLRKNHQNKRALYQEYSEPRGRITAAGTLLA 60
Query 64 YSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADF 123
YS +D RFR+LR Y +P VYAP+TG+YS+ + T LE E+ +L+G+D RLF +RL DF
Sbjct 61 YSDPSDDRFRYLRKYNDPMVYAPITGYYSMLFDKTGLELKENAVLDGTDERLFSQRLLDF 120
Query 124 FTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDP 183
RGG V+TTI+ ++Q+ + + GC G C GAVVAL P G ILA+ S+PSYDP
Sbjct 121 LASHGQRGGVVNTTIDAKLQEVAYRQLASGCTGGCVGAVVALNPKNGAILAMASAPSYDP 180
Query 184 NLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQL 243
NLLASH+ + A+ + L +P PL NRAI + YPPGSTFKV+TTAAAL+ G + +L
Sbjct 181 NLLASHDFDGTAKYYDSLSKDPKQPLLNRAIDQAYPPGSTFKVVTTAAALSYGISPDIRL 240
Query 244 TAAPTIPLPGS-TAQLENYGGAPCGDEP--TVSLREAFVKSCNTAFVQLGIRTGADA--- 297
TAA +I LPG+ +A L NYGG C + V+LR+AF SCNTAFVQL + +A
Sbjct 241 TAAGSIALPGTASATLPNYGGETCPESVGGEVTLRQAFAYSCNTAFVQLMTQKVPNAEAV 300
Query 298 LRSMARAFGLDSPPRPTPLQVAEST-VGP------IPDSAALGMTSIGQKDVALTPLANA 350
LR MA L+ + P+ VA S V P D+AALG + IGQ+DV LTPL NA
Sbjct 301 LRGMATQLRLND-KQSIPMSVAPSQLVSPEEPNLLQKDAAALGQSVIGQRDVQLTPLMNA 359
Query 351 EIAATIANGGITMRPYLVGSLKGPDLANI--STTVGYQQRRAVSPQVAAKLTELMVGAEK 408
EI A +ANGG P++V GPDL + T A+ PQ+A LT+LMV AE+
Sbjct 360 EIVACVANGGFLATPFVVQQEFGPDLKPLGDDKTTRSVLVPAMRPQIAKTLTDLMVEAER 419
Query 409 VAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRL- 467
+ KG P ++IASKTGTA+ +P + P++WY+AFAPA P++A+AVLVE G++ L
Sbjct 420 RSGGKGKDPKLEIASKTGTAD---NPHNPSPYSWYVAFAPASHPQIALAVLVE-GSEALG 475
Query 468 -SATGGALAAPIGRAVIEAAL 487
ATG ++A PIGRAVI AL
Sbjct 476 PGATGASVAGPIGRAVIAQAL 496
Lambda K H
0.316 0.132 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1050302235812
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40