BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0020c Length=527 Score E Sequences producing significant alignments: (Bits) Value gi|15607162|ref|NP_214534.1| hypothetical protein Rv0020c [Mycob... 1020 0.0 gi|15839394|ref|NP_334431.1| hypothetical protein MT0023 [Mycoba... 918 0.0 gi|289756079|ref|ZP_06515457.1| conserved hypothetical protein [... 916 0.0 gi|340625053|ref|YP_004743505.1| hypothetical protein MCAN_00191... 916 0.0 gi|289445545|ref|ZP_06435289.1| conserved hypothetical protein [... 916 0.0 gi|289572596|ref|ZP_06452823.1| FHA domain-containing protein [M... 915 0.0 gi|121635930|ref|YP_976153.1| hypothetical protein BCG_0050c [My... 913 0.0 gi|31791197|ref|NP_853690.1| hypothetical protein Mb0020c [Mycob... 910 0.0 gi|183980057|ref|YP_001848348.1| hypothetical protein MMAR_0022 ... 646 0.0 gi|118615941|ref|YP_904273.1| hypothetical protein MUL_0024 [Myc... 642 0.0 gi|15826885|ref|NP_301148.1| hypothetical protein ML0022 [Mycoba... 603 2e-170 gi|254819098|ref|ZP_05224099.1| hypothetical protein MintA_04183... 574 1e-161 gi|296167110|ref|ZP_06849520.1| xyppx repeat-containing protein ... 570 2e-160 gi|289764136|ref|ZP_06523514.1| conserved hypothetical protein [... 565 9e-159 gi|2344826|emb|CAA94723.1| hypothetical protein [Mycobacterium l... 565 1e-158 gi|41406121|ref|NP_958957.1| hypothetical protein MAP0023c [Myco... 564 2e-158 gi|118465219|ref|YP_879325.1| hypothetical protein MAV_0024 [Myc... 561 8e-158 gi|336462097|gb|EGO40939.1| FHA domain-containing protein [Mycob... 546 2e-153 gi|289441387|ref|ZP_06431131.1| conserved hypothetical protein [... 523 2e-146 gi|333988661|ref|YP_004521275.1| hypothetical protein JDM601_002... 466 5e-129 gi|120401057|ref|YP_950886.1| FHA domain-containing protein [Myc... 460 2e-127 gi|342860259|ref|ZP_08716911.1| hypothetical protein MCOL_15320 ... 452 6e-125 gi|118471786|ref|YP_884455.1| FHA domain-containing protein [Myc... 435 1e-119 gi|108797002|ref|YP_637199.1| FHA domain-containing protein [Myc... 416 5e-114 gi|145221400|ref|YP_001132078.1| FHA domain-containing protein [... 405 9e-111 gi|315441720|ref|YP_004074599.1| FHA domain-containing protein [... 404 3e-110 gi|289748482|ref|ZP_06507860.1| LOW QUALITY PROTEIN: conserved h... 383 4e-104 gi|240172389|ref|ZP_04751048.1| hypothetical protein MkanA1_2394... 362 7e-98 gi|254773076|ref|ZP_05214592.1| hypothetical protein MaviaA2_001... 338 1e-90 gi|289748483|ref|ZP_06507861.1| conserved hypothetical protein [... 303 4e-80 gi|111020690|ref|YP_703662.1| hypothetical protein RHA1_ro03703 ... 299 7e-79 gi|134096668|ref|YP_001102329.1| FHA domain-containing protein [... 261 3e-67 gi|254773075|ref|ZP_05214591.1| xyppx repeat-containing protein ... 249 1e-63 gi|320089911|pdb|3PO8|A Chain A, Structural And Functional Analy... 201 2e-49 gi|169627146|ref|YP_001700795.1| hypothetical protein MAB_0039c ... 185 2e-44 gi|312137542|ref|YP_004004878.1| hypothetical protein REQ_00290 ... 176 1e-41 gi|325677492|ref|ZP_08157156.1| FHA domain protein [Rhodococcus ... 174 4e-41 gi|54022050|ref|YP_116292.1| hypothetical protein nfa860 [Nocard... 168 2e-39 gi|226303523|ref|YP_002763481.1| hypothetical protein RER_00340 ... 167 3e-39 gi|226362929|ref|YP_002780709.1| hypothetical protein ROP_35170 ... 166 7e-39 gi|229492081|ref|ZP_04385892.1| FHA domain protein [Rhodococcus ... 166 7e-39 gi|326383939|ref|ZP_08205623.1| Forkhead-associated protein [Gor... 166 8e-39 gi|229492213|ref|ZP_04386021.1| FHA domain protein [Rhodococcus ... 165 2e-38 gi|296137783|ref|YP_003645026.1| FHA domain-containing protein [... 164 4e-38 gi|302531412|ref|ZP_07283754.1| FHA domain-containing protein [S... 161 3e-37 gi|291009306|ref|ZP_06567279.1| FHA domain-containing protein [S... 159 1e-36 gi|262200075|ref|YP_003271283.1| Forkhead-associated protein [Go... 159 1e-36 gi|257054127|ref|YP_003131959.1| FHA domain-containing protein [... 155 1e-35 gi|343928767|ref|ZP_08768212.1| hypothetical protein GOALK_120_0... 154 4e-35 gi|333917716|ref|YP_004491297.1| FHA domain-containing protein [... 153 6e-35 >gi|15607162|ref|NP_214534.1| hypothetical protein Rv0020c [Mycobacterium tuberculosis H37Rv] gi|148659779|ref|YP_001281302.1| hypothetical protein MRA_0022 [Mycobacterium tuberculosis H37Ra] gi|148821211|ref|YP_001285965.1| hypothetical protein TBFG_10020 [Mycobacterium tuberculosis F11] 38 more sequence titles Length=527 Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/527 (100%), Positives = 527/527 (100%), Gaps = 0/527 (0%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 >gi|15839394|ref|NP_334431.1| hypothetical protein MT0023 [Mycobacterium tuberculosis CDC1551] gi|254233424|ref|ZP_04926750.1| conserved hypothetical protein TB39.8 [Mycobacterium tuberculosis C] gi|254366480|ref|ZP_04982524.1| conserved hypothetical protein TB39.8 [Mycobacterium tuberculosis str. Haarlem] 16 more sequence titles Length=521 Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/527 (99%), Positives = 521/527 (99%), Gaps = 6/527 (1%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYP DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYP------DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 294 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 295 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 354 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 355 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 414 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 415 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 474 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 475 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 521 >gi|289756079|ref|ZP_06515457.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289696666|gb|EFD64095.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=521 Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/527 (99%), Positives = 521/527 (99%), Gaps = 6/527 (1%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPEL+STGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELRSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYP DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYP------DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 294 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 295 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 354 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 355 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 414 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 415 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 474 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 475 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 521 >gi|340625053|ref|YP_004743505.1| hypothetical protein MCAN_00191 [Mycobacterium canettii CIPT 140010059] gi|340003243|emb|CCC42360.1| conserved hypothetical protein TB39.8 [Mycobacterium canettii CIPT 140010059] Length=521 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/527 (99%), Positives = 520/527 (99%), Gaps = 6/527 (1%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGG DPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGPDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYP DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYP------DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 294 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 295 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 354 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 355 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 414 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 415 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 474 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 475 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 521 >gi|289445545|ref|ZP_06435289.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289418503|gb|EFD15704.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=521 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/527 (99%), Positives = 520/527 (99%), Gaps = 6/527 (1%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTV DAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVDDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYP DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYP------DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 294 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 295 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 354 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 355 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 414 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 415 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 474 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 475 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 521 >gi|289572596|ref|ZP_06452823.1| FHA domain-containing protein [Mycobacterium tuberculosis K85] gi|339630103|ref|YP_004721745.1| hypothetical protein MAF_00200 [Mycobacterium africanum GM041182] gi|289537027|gb|EFD41605.1| FHA domain-containing protein [Mycobacterium tuberculosis K85] gi|339329459|emb|CCC25094.1| putative uncharacterized protein [Mycobacterium africanum GM041182] Length=521 Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/527 (99%), Positives = 520/527 (99%), Gaps = 6/527 (1%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHP QGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYP DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYP------DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 294 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 295 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 354 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 355 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 414 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 415 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 474 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 475 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 521 >gi|121635930|ref|YP_976153.1| hypothetical protein BCG_0050c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988403|ref|YP_002643070.1| hypothetical protein JTY_0020 [Mycobacterium bovis BCG str. Tokyo 172] gi|121491577|emb|CAL70034.1| Conserved hypothetical protein TB39.8 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771516|dbj|BAH24322.1| hypothetical protein JTY_0020 [Mycobacterium bovis BCG str. Tokyo 172] gi|341599946|emb|CCC62613.1| conserved hypothetical protein TB39.8 [Mycobacterium bovis BCG str. Moreau RDJ] Length=521 Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/527 (99%), Positives = 519/527 (99%), Gaps = 6/527 (1%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHP QGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYP DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYP------DQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 294 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGG GPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 295 SGGCGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 354 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESP+VPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 355 GATTYGRQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 414 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 415 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 474 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 475 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 521 >gi|31791197|ref|NP_853690.1| hypothetical protein Mb0020c [Mycobacterium bovis AF2122/97] gi|31616782|emb|CAD92882.1| CONSERVED HYPOTHETICAL PROTEIN TB39.8 [Mycobacterium bovis AF2122/97] Length=521 Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/527 (98%), Positives = 518/527 (99%), Gaps = 6/527 (1%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAAD IQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADRIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHP QGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYP DQRG+QDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ Sbjct 241 QRGYP------DQRGHQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 294 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 SGG GPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ Sbjct 295 SGGCGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 354 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 GATTYGRQDYGGGADYTRYTESP+VPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG Sbjct 355 GATTYGRQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 414 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR Sbjct 415 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 474 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 475 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 521 >gi|183980057|ref|YP_001848348.1| hypothetical protein MMAR_0022 [Mycobacterium marinum M] gi|183173383|gb|ACC38493.1| conserved protein [Mycobacterium marinum M] Length=546 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/556 (77%), Positives = 453/556 (82%), Gaps = 39/556 (7%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQK LVQR+ERKLE TVGDAFAR+FGGSIVPQEVEALLRREAADG++SL GNRLLAPN Sbjct 1 MGSQKGLVQRIERKLESTVGDAFARMFGGSIVPQEVEALLRREAADGVRSLPGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITL VHD E+LGADP L S+ FAR LADYI EQGWQTYGDVVVRFEQSS+LHTGQFR Sbjct 61 EYIITLSVHDAEELGADPHLTSSEFARYLADYIHEQGWQTYGDVVVRFEQSSSLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARG VNPDVE P V D A+PQSN AFGAEPGV PM+DNSSYRGGQGQGRPDEYYD+RYA Sbjct 121 ARGAVNPDVEPRPTVNDSAQPQSNDAFGAEPGVPPMTDNSSYRGGQGQGRPDEYYDERYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGG P GG DPRGGYPPE GGYPPQPGYP PR DQG YPEQ GYP+QGGYP+ Sbjct 181 RPQEDPRGG--PHGGPDPRGGYPPEAGGYPPQPGYPPPRPQDQGGYPEQGGYPEQGGYPD 238 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQ----GQGGYPPPYEQRPPVSPGPAAGYGAPGYDQ 296 QRGY +QRGY DQRGY DQG GYPDQ QGGYPP YEQRPP +PG GYGA GYDQ Sbjct 239 QRGYQDQRGYQDQRGYPDQG-GYPDQRGYPEQGGYPPSYEQRPP-APG---GYGAQGYDQ 293 Query 297 GYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPE--QRPAYPDQ-GG 353 GYRQ+GGYG P GGQPGYGGYGEYGR PAR +EG+Y P P QRP YPDQ GG Sbjct 294 GYRQAGGYG-QPPGGQPGYGGYGEYGREPARQDEGAYSAPAAPSAPPEAQRPGYPDQGGG 352 Query 354 YDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDY 413 YDQGYQQG YGR +YG G DYT+Y ++ GY PQG GYA+PAGRDY+Y Q+ APDY Sbjct 353 YDQGYQQGGAGYGRPEYGQG-DYTQYADTSSPGGYPPQGAGYADPAGRDYEYCQAAAPDY 411 Query 414 GQPAPGGY----SGYGQG------------------GYGSAGTSVTLQLDDGSGRTYQLR 451 GQ AP Y S YGQ GYG+AG+SV LQLDDGSGRTYQLR Sbjct 412 GQ-APPDYGQAPSDYGQAPPEYGQPAGGGYGGYGQSGYGAAGSSVILQLDDGSGRTYQLR 470 Query 452 EGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLAD 511 +GSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLAD Sbjct 471 DGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLAD 530 Query 512 GDVIRLGHSEIIVRMH 527 GDVIRLGHSEIIVR+H Sbjct 531 GDVIRLGHSEIIVRIH 546 >gi|118615941|ref|YP_904273.1| hypothetical protein MUL_0024 [Mycobacterium ulcerans Agy99] gi|118568051|gb|ABL02802.1| conserved protein [Mycobacterium ulcerans Agy99] Length=532 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/541 (78%), Positives = 448/541 (83%), Gaps = 23/541 (4%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQK LVQR+ERKLE TVGDAFAR+FGGSIVPQEVEALLRREAADG++SL GNRLLAPN Sbjct 1 MGSQKGLVQRIERKLESTVGDAFARMFGGSIVPQEVEALLRREAADGVRSLPGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITL VHD E+LGADP L S+ FAR LADYI EQGWQTY DVVVRFEQSS+LHTGQFR Sbjct 61 EYIITLSVHDAEELGADPHLTSSEFARYLADYIHEQGWQTYADVVVRFEQSSSLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARG VNPDVE P V D A+PQSN AFGAEPGV PM+DNSSYRGGQGQGRPDEYYD+RYA Sbjct 121 ARGAVNPDVEPRPTVNDSAQPQSNDAFGAEPGVPPMTDNSSYRGGQGQGRPDEYYDERYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGG P GG DPRGGYPPE GGYPPQPGYP PR DQG YPEQ GYPDQ GYP+ Sbjct 181 RPQEDPRGG--PHGGPDPRGGYPPEAGGYPPQPGYPPPRPQDQGGYPEQGGYPDQRGYPD 238 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQ----GQGGYPPPYEQRPPVSPGPAAGYGAPGYDQ 296 QRGY +QRGYPDQR YQDQG GYPDQ QGGYPP YEQ PP +PG GYGA GYDQ Sbjct 239 QRGYQDQRGYPDQRDYQDQG-GYPDQRGYPEQGGYPPSYEQCPP-APG---GYGAQGYDQ 293 Query 297 GYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPE--QRPAYPDQ-GG 353 G + GG P GGQPGYGGYGEYGR PAR +EG+Y P P QRP YPDQ GG Sbjct 294 G-YRQGGGYGQPPGGQPGYGGYGEYGREPARQDEGAYSAPAAPSAPPEAQRPGYPDQGGG 352 Query 354 YDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDY 413 YDQGYQQG YGR +YG G DYT+Y ++ GY PQG GYA+PAGRDY+YGQ+ APDY Sbjct 353 YDQGYQQGGAGYGRPEYGQG-DYTQYADTSSPGGYPPQGAGYADPAGRDYEYGQAAAPDY 411 Query 414 GQPAP-------GGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFR 466 GQ P GGY GYGQ GYG+AG+SV LQLDDGSGRTYQLR+GSNIIGRGQDAQFR Sbjct 412 GQAPPDYGQPAGGGYGGYGQSGYGAAGSSVILQLDDGSGRTYQLRDGSNIIGRGQDAQFR 471 Query 467 LPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRM 526 LPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVR+ Sbjct 472 LPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRI 531 Query 527 H 527 H Sbjct 532 H 532 >gi|15826885|ref|NP_301148.1| hypothetical protein ML0022 [Mycobacterium leprae TN] gi|221229363|ref|YP_002502779.1| hypothetical protein MLBr_00022 [Mycobacterium leprae Br4923] gi|13092432|emb|CAC29530.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932470|emb|CAR70115.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=488 Score = 603 bits (1556), Expect = 2e-170, Method: Compositional matrix adjust. Identities = 375/531 (71%), Positives = 409/531 (78%), Gaps = 47/531 (8%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M +QK L+QR+ERKLE ++ DAFAR+FGGSIVPQEVEALLRREA+DG++SLQGNRLLAPN Sbjct 1 MDNQKELIQRIERKLESSIDDAFARMFGGSIVPQEVEALLRREASDGVRSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHD EK+ ADP+L S+ FA DLADYI EQGWQTYGDVVVRF+QSS+LHTGQ R Sbjct 61 EYIITLGVHDLEKMKADPDLTSSAFASDLADYIHEQGWQTYGDVVVRFDQSSSLHTGQIR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 AR VNPDVE P V D R QSN AF AEPGV PM+DNSSYRGGQGQGRP DD Y Sbjct 121 ARSVVNPDVEPRPTVNDPVRTQSNQAFSAEPGVPPMTDNSSYRGGQGQGRPS---DDYYG 177 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQ+DPRG DPQGG DPRG YPP+ G YP Q G+P PDQG YP Q GY DQ Sbjct 178 RPQDDPRGA-DPQGGQDPRGCYPPKPGSYPQQAGHPPLHRPDQGGYPGQGGYEDQ----- 231 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 R Y DQGQGGYP PYEQRP +PG GYG+ G+DQGYR Sbjct 232 --------------------RAYHDQGQGGYPSPYEQRP-ATPG---GYGSQGHDQGYRP 267 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGG-YDQGYQ 359 G P GGQPGYGGYG+YGRGPAR +EGSY PSG P PPEQR AYPDQGG YDQGYQ Sbjct 268 --GSYGPPSGGQPGYGGYGDYGRGPARPDEGSYTPSGFPAPPEQRVAYPDQGGGYDQGYQ 325 Query 360 QGATTYGRQDYGGGADYTRYTESPRVPG--YAPQGGGYAEPAGRDYDYGQSGAP-DYGQP 416 YGR+DYG +YT+Y E+ +PG YAP GGYAEPAGRDYDYGQ GA DY QP Sbjct 326 HSGLGYGREDYGR-QEYTQYAEN--LPGGVYAPSSGGYAEPAGRDYDYGQPGAANDYSQP 382 Query 417 APGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRH 476 GGY GYG + G++V LQLDDGSGRTYQLREGSNI+GRGQDAQFRLPDTGVSRRH Sbjct 383 VIGGYGGYG-----ALGSAVILQLDDGSGRTYQLREGSNIVGRGQDAQFRLPDTGVSRRH 437 Query 477 LEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 LEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVR+H Sbjct 438 LEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRIH 488 >gi|254819098|ref|ZP_05224099.1| hypothetical protein MintA_04183 [Mycobacterium intracellulare ATCC 13950] Length=542 Score = 574 bits (1480), Expect = 1e-161, Method: Compositional matrix adjust. Identities = 375/553 (68%), Positives = 407/553 (74%), Gaps = 37/553 (6%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M SQ+ L R+ERKLE +V +AFAR+FGGSIVPQEVEALL REA DG+Q L GNRLLAPN Sbjct 1 MSSQRGLAARIERKLEASVDNAFARVFGGSIVPQEVEALLCREARDGVQKLHGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLG+HDF K+ DP+L S+ FAR LADYI EQGWQTYG+VVVRFEQSSNL TGQ+R Sbjct 61 EYIITLGMHDFGKVSTDPDLTSSSFARYLADYIHEQGWQTYGEVVVRFEQSSNLRTGQYR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRY 179 ARG VNPDV+ P D RPQSN+AFG E GVAPM+DNSSYRG QG GRP DEYYDDRY Sbjct 121 ARGAVNPDVQPRPTDKDAVRPQSNNAFGDERGVAPMTDNSSYRGDQGPGRPGDEYYDDRY 180 Query 180 ARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYP------ 233 RPQ+D RGGPDPQG DPRGGYPPE GGYPPQ GYP PR P+QG YPEQ GYP Sbjct 181 RRPQDDARGGPDPQGAPDPRGGYPPEQGGYPPQQGYP-PRQPEQGGYPEQGGYPPQPGYQ 239 Query 234 DQGGYPEQRGYPE--QRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGA 291 DQGGY Q GYP+ Q GYP Q GYQDQ RGYPDQGQGGYP YEQRPP G G G Sbjct 240 DQGGYQGQAGYPDQGQGGYPPQPGYQDQ-RGYPDQGQGGYPQSYEQRPPAPGGYGGGQGY 298 Query 292 PGYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQ 351 + G GG Q GGY +YGRGPAR +EG Y PPEQRPAYP+Q Sbjct 299 EQGYRQGGYGPPAGQPGGGPQGYGGGYADYGRGPARQDEGGYA------PPEQRPAYPEQ 352 Query 352 GGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAP 411 GG Q YGRQDY G +YT+Y E + Y QGGGY E A +YDYGQ P Sbjct 353 GGGYDQGYQQGGGYGRQDY-GSPEYTQYAEHAQGTTYGGQGGGYPEAASPEYDYGQQ--P 409 Query 412 DYGQPAPGGY-SGYGQ----------------GGYGSAGTSVTLQLDDGSGRTYQLREGS 454 DYGQ A G + YGQ GGYG+ GT++TLQLDDGSGRTYQLREGS Sbjct 410 DYGQQAEYGQPADYGQPADYGQQAGGYGGYGQGGYGATGTTITLQLDDGSGRTYQLREGS 469 Query 455 NIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDV 514 NIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDV Sbjct 470 NIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDV 529 Query 515 IRLGHSEIIVRMH 527 IRLGHSEIIVR+H Sbjct 530 IRLGHSEIIVRIH 542 >gi|296167110|ref|ZP_06849520.1| xyppx repeat-containing protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897552|gb|EFG77148.1| xyppx repeat-containing protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=549 Score = 570 bits (1469), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 387/563 (69%), Positives = 416/563 (74%), Gaps = 50/563 (8%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M SQ+ L R+ERKLE TV +AFAR+FGGSIVPQEVE +LRREA DG+Q L GNRLLAPN Sbjct 1 MSSQRGLAARIERKLEATVDNAFARVFGGSIVPQEVETVLRREARDGVQRLHGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLG HDFEK+GADP+L S FAR LADYI EQGWQTYG+VVVRFEQSSNL TGQ+R Sbjct 61 EYIITLGRHDFEKVGADPDLTSGAFARYLADYIHEQGWQTYGEVVVRFEQSSNLRTGQYR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRY 179 ARG VNPDV+ P V D RPQSN AFGAE GVAPM+D+SSYRG QG GRP DEY+DDRY Sbjct 121 ARGAVNPDVQPRPSVHDPVRPQSNDAFGAERGVAPMTDDSSYRGAQGPGRPSDEYHDDRY 180 Query 180 ARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYP 239 RPQE GG +PQGG DPRGGYPPE GGYPPQ GYP PRHP+QG YPEQ GY GGYP Sbjct 181 GRPQE---GGAEPQGGPDPRGGYPPEQGGYPPQQGYPPPRHPEQGGYPEQGGYQAPGGYP 237 Query 240 EQRGYPEQRGYPDQRGYQ------DQGR-GYPDQGQGGYPPPYEQRPPV-SPGPAAGYGA 291 +QRGY GYPDQRGYQ +QG+ GYP+QGQ GYPP YEQRPP GY Sbjct 238 DQRGYQAPGGYPDQRGYQAPGGYPEQGQAGYPEQGQAGYPPQYEQRPPAPGGYGGQGYDQ 297 Query 292 PGYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQ 351 G G G G Q GGY EYGRGPAR +EG Y PPEQRPAYP+Q Sbjct 298 GYRPGGGYGPPGGGQPGGAQQGYGGGYAEYGRGPARQDEGGYA------PPEQRPAYPEQ 351 Query 352 -------------GGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEP 398 GGYDQGYQQG YGRQDY ADYT+Y E+ G P GGY E Sbjct 352 GGGYEQGGYEQQPGGYDQGYQQGG--YGRQDY--AADYTQYAENVPG-GGYPGQGGYPET 406 Query 399 AGRDYDYGQS---------GAP-DYGQPA----PGGYSGYGQGGYGSAGTSVTLQLDDGS 444 A RDYDYGQ GAP DYGQPA P G G GGYG+AGT+VTLQLDDGS Sbjct 407 AHRDYDYGQQAEYAQPSEYGAPADYGQPADYGQPAGGYGGYGGGYGAAGTTVTLQLDDGS 466 Query 445 GRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPV 504 GRTYQLREGSNI+GRGQDAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPV Sbjct 467 GRTYQLREGSNIVGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPV 526 Query 505 QEWQLADGDVIRLGHSEIIVRMH 527 QEWQLADGDVIRLGHSEIIVR+H Sbjct 527 QEWQLADGDVIRLGHSEIIVRIH 549 >gi|289764136|ref|ZP_06523514.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711642|gb|EFD75658.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=373 Score = 565 bits (1455), Expect = 9e-159, Method: Compositional matrix adjust. Identities = 296/341 (87%), Positives = 296/341 (87%), Gaps = 1/341 (0%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPG P G Sbjct 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGRLPATALPA-TTGLSP 299 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGP 341 S P P G G P G P GP Sbjct 300 SAATALHPVAASPATAGTGSTFAWPGSPRGGQLCALWPSGP 340 >gi|2344826|emb|CAA94723.1| hypothetical protein [Mycobacterium leprae] Length=463 Score = 565 bits (1455), Expect = 1e-158, Method: Compositional matrix adjust. Identities = 359/506 (71%), Positives = 388/506 (77%), Gaps = 47/506 (9%) Query 26 IFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLGVHDFEKLGADPELKSTGF 85 +FGGSIVPQEVEALLRREA+DG++SLQGNRLLAPNEYIITLGVHD EK+ ADP+L S+ F Sbjct 1 MFGGSIVPQEVEALLRREASDGVRSLQGNRLLAPNEYIITLGVHDLEKMKADPDLTSSAF 60 Query 86 ARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNPDVETHPPVIDCARPQSNH 145 A DLADYI EQGWQTYGDVVVRF+QSS+LHTGQ RAR VNPDVE P V D R QSN Sbjct 61 ASDLADYIHEQGWQTYGDVVVRFDQSSSLHTGQIRARSVVNPDVEPRPTVNDPVRTQSNQ 120 Query 146 AFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQEDPRGGPDPQGGSDPRGGYPPE 205 AF AEPGV PM+DNSSYRGGQGQGRP DD Y RPQ+DPRG DPQGG DPRG YPP+ Sbjct 121 AFSAEPGVPPMTDNSSYRGGQGQGRPS---DDYYGRPQDDPRGA-DPQGGQDPRGCYPPK 176 Query 206 TGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGYPEQRGYPDQRGYQDQGRGYPD 265 G YP Q G+P PDQG YP Q GY DQ R Y D Sbjct 177 PGSYPQQAGHPPLHRPDQGGYPGQGGYEDQ-------------------------RAYHD 211 Query 266 QGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGP 325 QGQGGYP PYEQRP +PG GYG+ G+DQGYR G P GGQPGYGGYG+YGRGP Sbjct 212 QGQGGYPSPYEQRP-ATPG---GYGSQGHDQGYRP--GSYGPPSGGQPGYGGYGDYGRGP 265 Query 326 ARHEEGSYVPSGPPGPPEQRPAYPDQGG-YDQGYQQGATTYGRQDYGGGADYTRYTESPR 384 AR +EGSY PSG P PPEQR AYPDQGG YDQGYQ YGR+DYG +YT+Y E+ Sbjct 266 ARPDEGSYTPSGFPAPPEQRVAYPDQGGGYDQGYQHSGLGYGREDYGR-QEYTQYAEN-- 322 Query 385 VPG--YAPQGGGYAEPAGRDYDYGQSGAP-DYGQPAPGGYSGYGQGGYGSAGTSVTLQLD 441 +PG YAP GGYAEPAGRDYDYGQ GA DY QP GGY GYG + G++V LQLD Sbjct 323 LPGGVYAPSSGGYAEPAGRDYDYGQPGAANDYSQPVIGGYGGYG-----ALGSAVILQLD 377 Query 442 DGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNN 501 DGSGRTYQLREGSNI+GRGQDAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNN Sbjct 378 DGSGRTYQLREGSNIVGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNN 437 Query 502 APVQEWQLADGDVIRLGHSEIIVRMH 527 APVQEWQLADGDVIRLGHSEIIVR+H Sbjct 438 APVQEWQLADGDVIRLGHSEIIVRIH 463 >gi|41406121|ref|NP_958957.1| hypothetical protein MAP0023c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394469|gb|AAS02340.1| hypothetical protein MAP_0023c [Mycobacterium avium subsp. paratuberculosis K-10] Length=544 Score = 564 bits (1453), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 380/556 (69%), Positives = 414/556 (75%), Gaps = 41/556 (7%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M SQ+ LV R+ERKLE TV +AFAR+FGG IVPQEVEALL REA DG+Q L GNRLLAPN Sbjct 1 MSSQRGLVARIERKLEATVDNAFARVFGGPIVPQEVEALLCREARDGVQKLHGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLG+HDFEK+ ADP+L S+ FAR LADYI EQGWQTYG+VVVRFEQSS+L TGQ+R Sbjct 61 EYIITLGMHDFEKVSADPDLTSSAFARYLADYIHEQGWQTYGEVVVRFEQSSSLRTGQYR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRY 179 A G VNPDV+ P V D RPQSN+AFG E GVAPM+DNSSYRG QG GRP DEYYD+RY Sbjct 121 ACGAVNPDVQPRPTVDDPVRPQSNNAFGEERGVAPMTDNSSYRGAQGPGRPGDEYYDERY 180 Query 180 ARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYP------ 233 RPQ+D RGG +PQG D RGGYPPE GYPPQ GYP PRHP+QG YPEQ GYP Sbjct 181 GRPQDDARGGSEPQGAPDQRGGYPPEQAGYPPQQGYPPPRHPEQGGYPEQGGYPPPQSYQ 240 Query 234 DQGGYPEQR-GYPE--QRGY-PDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGY 289 + GGYP+QR GYPE Q GY P Q GY DQ RGYP+ QGGYP YEQRPP P GY Sbjct 241 EHGGYPDQRGGYPEPGQGGYPPQQHGYPDQ-RGYPEPAQGGYPQSYEQRPPAPP----GY 295 Query 290 GAPGYDQ---GYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRP 346 GYDQ G P GG GYGGYG+YGRGPAR +EG Y PPEQRP Sbjct 296 SGQGYDQGYRPPGGYPPPGGQPAGGPQGYGGYGDYGRGPARPDEGGYA------PPEQRP 349 Query 347 AYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYG 406 AYP+QGG YGRQDY G A+YT+Y E + YAP GGGY E G +Y+YG Sbjct 350 AYPEQGGGYDQGYPQGGGYGRQDY-GSAEYTQYAEHAQGATYAPPGGGYPEAPGSEYEYG 408 Query 407 QSG----APDYGQPAPGG-----------YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLR 451 Q P+Y QPA G Y GYGQGGYGS GT+VTLQLDDGSGRTYQLR Sbjct 409 QPADYGQQPEYAQPAEYGQPADYGQQAGGYGGYGQGGYGSTGTTVTLQLDDGSGRTYQLR 468 Query 452 EGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLAD 511 EGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLAD Sbjct 469 EGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLAD 528 Query 512 GDVIRLGHSEIIVRMH 527 GDVIRLGHSEIIVR+H Sbjct 529 GDVIRLGHSEIIVRIH 544 >gi|118465219|ref|YP_879325.1| hypothetical protein MAV_0024 [Mycobacterium avium 104] gi|118166506|gb|ABK67403.1| xyppx repeat family protein [Mycobacterium avium 104] Length=545 Score = 561 bits (1447), Expect = 8e-158, Method: Compositional matrix adjust. Identities = 380/557 (69%), Positives = 414/557 (75%), Gaps = 42/557 (7%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M SQ+ LV R+ERKLE TV +AFAR+FGG IVPQEVEALL REA DG+Q L GNRLLAPN Sbjct 1 MSSQRGLVARIERKLEATVDNAFARVFGGPIVPQEVEALLCREARDGVQKLHGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLG+HDFEK+ ADP+L S+ FAR LADYI EQGWQTYG+VVVRFEQSS+L TGQ+R Sbjct 61 EYIITLGMHDFEKVSADPDLTSSAFARYLADYIHEQGWQTYGEVVVRFEQSSSLRTGQYR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRY 179 A G VNPDV+ P V D RPQSN+AFG E GVAPM+DNSSYRG QG GRP DEYYD+RY Sbjct 121 ACGAVNPDVQPRPTVDDPVRPQSNNAFGEERGVAPMTDNSSYRGAQGPGRPGDEYYDERY 180 Query 180 ARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYP------ 233 RPQ+D RGG +PQG D RGGYPPE GGYPPQ GYP PRHP+QG YPEQ GYP Sbjct 181 GRPQDDARGGSEPQGAPDQRGGYPPEQGGYPPQQGYPPPRHPEQGGYPEQGGYPPPQSYQ 240 Query 234 DQGGYPEQR-GYPE--QRGY-PDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGY 289 + GGYP+QR GYPE Q GY P Q GY D RGYP+ QGGYP YEQRPP P GY Sbjct 241 EHGGYPDQRGGYPEPGQAGYPPQQHGYPDL-RGYPEPAQGGYPQSYEQRPPAPP----GY 295 Query 290 GAPGYDQ----GYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQR 345 GYDQ G P GG GYGGYG+YGRGPAR +EG Y PPEQR Sbjct 296 SGQGYDQGYRPPGGGYPPPGGQPAGGPQGYGGYGDYGRGPARPDEGGYA------PPEQR 349 Query 346 PAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDY 405 PAYP+QGG YGRQDY G A+YT+Y E + YAP GGGY E G +Y+Y Sbjct 350 PAYPEQGGGYDQGYPQGGGYGRQDY-GSAEYTQYAEHAQGATYAPPGGGYPEAPGSEYEY 408 Query 406 GQSG----APDYGQPAPGG-----------YSGYGQGGYGSAGTSVTLQLDDGSGRTYQL 450 GQ P+Y QPA G Y GYGQGGYGS GT+VTLQLDDGSGRTYQL Sbjct 409 GQPADYGQQPEYAQPAEYGQPADYGQQAGGYGGYGQGGYGSTGTTVTLQLDDGSGRTYQL 468 Query 451 REGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLA 510 REGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLA Sbjct 469 REGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLA 528 Query 511 DGDVIRLGHSEIIVRMH 527 DGDVIRLGHSEIIVR+H Sbjct 529 DGDVIRLGHSEIIVRIH 545 >gi|336462097|gb|EGO40939.1| FHA domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=511 Score = 546 bits (1408), Expect = 2e-153, Method: Compositional matrix adjust. Identities = 363/546 (67%), Positives = 396/546 (73%), Gaps = 54/546 (9%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M SQ+ LV R+ERKLE TV +AFAR+FGG IVPQEVEALL REA DG+Q L GNRLLAPN Sbjct 1 MSSQRGLVARIERKLEATVDNAFARVFGGPIVPQEVEALLCREARDGVQKLHGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLG+HDFEK+ ADP+L S+ FAR LADYI EQGWQTYG+VVVRFEQSS+L TGQ+R Sbjct 61 EYIITLGMHDFEKVSADPDLTSSAFARYLADYIHEQGWQTYGEVVVRFEQSSSLRTGQYR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRY 179 A G VNPDV+ P V D RPQSN+AFG E GVAPM+DNSSYRG QG GRP DEYYD+RY Sbjct 121 ACGAVNPDVQPRPTVDDPVRPQSNNAFGEERGVAPMTDNSSYRGAQGPGRPGDEYYDERY 180 Query 180 ARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYP 239 RPQ+D RGG +PQG D RGGYPPE GYPPQ GYP PRHP+QG YP Sbjct 181 GRPQDDARGGSEPQGAPDQRGGYPPEQAGYPPQQGYPPPRHPEQGGYP------------ 228 Query 240 EQRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQ--- 296 P+Q GYPDQ RGYP+ QGGYP YEQRPP P GY GYDQ Sbjct 229 -----PQQHGYPDQ-------RGYPEPAQGGYPQSYEQRPPAPP----GYSGQGYDQGYR 272 Query 297 GYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQ 356 G P GG GYGGYG+YGRGPAR +EG Y PPEQRPAYP+QGG Sbjct 273 PPGGYPPPGGQPAGGPQGYGGYGDYGRGPARPDEGGYA------PPEQRPAYPEQGGGYD 326 Query 357 GYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSG----APD 412 YGRQDY G A+YT+Y E + YAP GGGY E G +Y+YGQ P+ Sbjct 327 QGYPQGGGYGRQDY-GSAEYTQYAEHAQGATYAPPGGGYPEAPGSEYEYGQPADYGQQPE 385 Query 413 YGQPAPGG-----------YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQ 461 Y QPA G Y GYGQGGYGS GT+VTLQLDDGSGRTYQLREGSNIIGRGQ Sbjct 386 YAQPAEYGQPADYGQQAGGYGGYGQGGYGSTGTTVTLQLDDGSGRTYQLREGSNIIGRGQ 445 Query 462 DAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSE 521 DAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDVIRLGHSE Sbjct 446 DAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDVIRLGHSE 505 Query 522 IIVRMH 527 IIVR+H Sbjct 506 IIVRIH 511 >gi|289441387|ref|ZP_06431131.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289414306|gb|EFD11546.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=483 Score = 523 bits (1348), Expect = 2e-146, Method: Compositional matrix adjust. Identities = 258/274 (95%), Positives = 259/274 (95%), Gaps = 7/274 (2%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQ P + G P Sbjct 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQATTPSKSGTPT------ 234 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPP 274 R YPEQRGYPDQRGYQDQGRGYPDQGQGGYPPP Sbjct 235 -RAYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPP 267 >gi|333988661|ref|YP_004521275.1| hypothetical protein JDM601_0021 [Mycobacterium sp. JDM601] gi|333484629|gb|AEF34021.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=520 Score = 466 bits (1199), Expect = 5e-129, Method: Compositional matrix adjust. Identities = 325/550 (60%), Positives = 367/550 (67%), Gaps = 53/550 (9%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M SQ+ LVQR+ERKLE V DA AR+FGG +VP+E+EA LRREAA G+++L GN+LLAPN Sbjct 1 MDSQRGLVQRIERKLESAVEDAMARVFGGEVVPEEIEAALRREAAAGVRALAGNQLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EY+ITLGV D+E +GAD + S FAR LA YI EQGWQTYGDVVVRFEQS +L TGQ R Sbjct 61 EYVITLGVDDYENVGADQDWTSKAFARHLAGYIGEQGWQTYGDVVVRFEQSPSLRTGQVR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQG-QGRP-DEYYDDR 178 RG VNPD V + PQS+HAF AE GV PM+DN SYRG G Q RP D+YYD R Sbjct 121 TRGAVNPDARPSHTVNEPRPPQSDHAFFAESGVPPMTDNPSYRGAHGQQDRPGDDYYDPR 180 Query 179 YARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQ--GDYPEQIGY---- 232 Y+RP +DPR GG +PRG Y PE P P PDQ G YP+Q Sbjct 181 YSRPADDPR------GGQEPRGQYAPE----------PEPYQPDQRGGGYPDQGPGGQGG 224 Query 233 ---------PDQGGYPEQRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSP 283 P+QGGYPE GYPEQ GYP+Q GY GYP Q P PYEQRPP Sbjct 225 PGGYAPPRRPEQGGYPEHGGYPEQGGYPEQGGYAGGQGGYP---QSYEPQPYEQRPP--- 278 Query 284 GPAAGYGAP-GYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPP 342 +GYGAP GY+ GY Q G G GYG+Y R PARH++ S + P P Sbjct 279 ---SGYGAPAGYEPGYPQHQQPAAPGYPGGGGQPGYGDYERPPARHDDYSQLGGYPEAQP 335 Query 343 EQRPAYPDQGGYDQGY-QQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGR 401 EQRPAYPDQGG GY QG+ +YGRQ+Y G DY RY ES P G Y + A Sbjct 336 EQRPAYPDQGG--PGYPDQGSPSYGRQEY-GQPDY-RYGESQGAPSGYDYGPDYGQQAPG 391 Query 402 DYDYGQSGAPDYGQPAPGGYS----GYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNII 457 Y Q G DYGQ GGY GYGQ Y SA SVTL LDDGSGRTYQL EG+N++ Sbjct 392 GYGDAQGGGYDYGQQPAGGYEAPGGGYGQRAY-SAPASVTLHLDDGSGRTYQLHEGTNVV 450 Query 458 GRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRL 517 GRGQDAQFRLPDTGVSRRHLEIRWDG+VALL+DLNSTNGTTVNNAPVQEWQLADGDV+RL Sbjct 451 GRGQDAQFRLPDTGVSRRHLEIRWDGRVALLSDLNSTNGTTVNNAPVQEWQLADGDVVRL 510 Query 518 GHSEIIVRMH 527 GHSEIIVR+H Sbjct 511 GHSEIIVRVH 520 >gi|120401057|ref|YP_950886.1| FHA domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119953875|gb|ABM10880.1| FHA domain containing protein [Mycobacterium vanbaalenii PYR-1] Length=470 Score = 460 bits (1184), Expect = 2e-127, Method: Compositional matrix adjust. Identities = 315/528 (60%), Positives = 351/528 (67%), Gaps = 67/528 (12%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 LV R ERKLE VGDAFAR+FGGSIVPQEVE+LLRREA G++ L G R+LAPN+Y+ITL Sbjct 3 LVGRFERKLEDKVGDAFARVFGGSIVPQEVESLLRREADAGVRELHGGRILAPNDYVITL 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 V D+ K+ ADP++ +T FA+ L YI EQGWQTYGDVVVRFEQS NLHTGQFRAR VN Sbjct 63 SVPDYRKVSADPDITATTFAKHLEGYIHEQGWQTYGDVVVRFEQSPNLHTGQFRARAAVN 122 Query 127 PDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQEDP 186 PD T ++ A P + AEPGV PM+DN +YRGGQG GRP DD Y RP ED Sbjct 123 PDATT----VEPAPPPRDVTSQAEPGVPPMTDNPTYRGGQGPGRP---ADDYYNRP-EDE 174 Query 187 RGGPDPQGGSDPRGGYPP-ETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGYP 245 R P G +PRGGYPP + GGYPP DQG YP + GYP+ GGYPE GYP Sbjct 175 R----PNRGDEPRGGYPPADQGGYPPPA--------DQGGYPPRGGYPEHGGYPEHGGYP 222 Query 246 EQRGYPDQRGYQDQGRGYPDQGQGGYPP-PYEQRPPVSPGPAAGYGAPGYDQGYRQSGGY 304 +Q GYP+Q GGYPP YEQRPP DQGYRQ Sbjct 223 DQGGYPEQ---------------GGYPPQSYEQRPPAG---YGPPPGGYPDQGYRQPPPG 264 Query 305 GPSPGGGQPGY---GGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQG 361 P GGQPGY G +YGR P G P RP+YPDQGGY G Sbjct 265 YGPPPGGQPGYGPPSGDYDYGRRPDDGGYGPQGPQ-------GRPSYPDQGGYPDQGGYG 317 Query 362 ATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAG-RDYDYGQSGAPDYGQPAPGG 420 YGRQDY DY RY E+P GY QG Y EPAG +D YGQ G+ Sbjct 318 GQQYGRQDYAQ-PDYGRYGEAP--AGYQDQG--YGEPAGYQDPGYGQGGS---------- 362 Query 421 YSGYG-QGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEI 479 Y+GYG QG Y +AG +VTLQLDDGSGRTYQLREG+N+IGRGQDAQFRLPDTGVSRRHLEI Sbjct 363 YAGYGAQGDYPAAGATVTLQLDDGSGRTYQLREGANVIGRGQDAQFRLPDTGVSRRHLEI 422 Query 480 RWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 RWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVR+H Sbjct 423 RWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRVH 470 >gi|342860259|ref|ZP_08716911.1| hypothetical protein MCOL_15320 [Mycobacterium colombiense CECT 3035] gi|342132637|gb|EGT85866.1| hypothetical protein MCOL_15320 [Mycobacterium colombiense CECT 3035] Length=478 Score = 452 bits (1163), Expect = 6e-125, Method: Compositional matrix adjust. Identities = 320/487 (66%), Positives = 353/487 (73%), Gaps = 36/487 (7%) Query 68 VHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNP 127 +HDFEK+ AD +L S+ FAR LADYI EQGWQTYG+VVVRFEQSS+L TGQ+RARG VNP Sbjct 1 MHDFEKVSADSDLTSSAFARYLADYIHEQGWQTYGEVVVRFEQSSSLRTGQYRARGAVNP 60 Query 128 DVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRYARPQEDP 186 DV+ P V + RPQSN+AFG E GVAPM+DNS YRG QG GR DEYYDDRY RPQ+D Sbjct 61 DVQPRPTVDEPVRPQSNNAFGEERGVAPMTDNSGYRGTQGPGRSGDEYYDDRYGRPQDDA 120 Query 187 RGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQG---GYPEQRG 243 RGGPDPQG D RGGYPPE GYPPQ GYP PR P+QG YPEQ GYPDQG GYP Q+G Sbjct 121 RGGPDPQGAPDQRGGYPPEQQGYPPQQGYPPPRQPEQGGYPEQGGYPDQGHGGGYPPQQG 180 Query 244 YPEQRGYPDQ---------RGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGY 294 YPEQRGYP+Q +GYQDQ RGYPDQGQGGYP YEQRPP +PG G G Sbjct 181 YPEQRGYPEQPGQGGYPPQQGYQDQ-RGYPDQGQGGYPQSYEQRPP-APGGYGGQGYDQG 238 Query 295 DQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGY 354 + G G PGGGQ GY GYG+YGRGPAR +EG Y P PE RP YP+QGG Sbjct 239 YRQAGGYGPPGGQPGGGQQGYPGYGDYGRGPARPDEGGYAP------PEHRPGYPEQGGG 292 Query 355 DQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSG--AP- 411 Q YGRQDYG A+YT+Y+E + Y Q GGY E A +Y+YGQ AP Sbjct 293 YDQGYQQGGGYGRQDYGS-AEYTQYSEHAQGGTYGGQAGGYPEAASPEYEYGQQADYAPP 351 Query 412 -------DYGQPAPGGYSGYGQGGYGSAG----TSVTLQLDDGSGRTYQLREGSNIIGRG 460 DYGQPA G G G T++TLQLDDGSGRTYQLREGSNI+GRG Sbjct 352 ADYGQQADYGQPADYGQQGGYGGYDQGGYGAGGTTITLQLDDGSGRTYQLREGSNIVGRG 411 Query 461 QDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHS 520 QDAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAP+QEWQLADGDVIRLGHS Sbjct 412 QDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPIQEWQLADGDVIRLGHS 471 Query 521 EIIVRMH 527 EIIVR+H Sbjct 472 EIIVRIH 478 >gi|118471786|ref|YP_884455.1| FHA domain-containing protein [Mycobacterium smegmatis str. MC2 155] gi|118173073|gb|ABK73969.1| FHA domain protein [Mycobacterium smegmatis str. MC2 155] Length=487 Score = 435 bits (1118), Expect = 1e-119, Method: Compositional matrix adjust. Identities = 311/535 (59%), Positives = 351/535 (66%), Gaps = 70/535 (13%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 LV R+ERKLE TVGDAFAR+FGGSIVPQEVE LRREA +++ G ++LAPN+Y+ITL Sbjct 9 LVDRIERKLESTVGDAFARVFGGSIVPQEVEVALRREAETRARTVAGGQVLAPNDYVITL 68 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D++K+ AD +L ST FA+ L YI +QGWQTYG+VVVRFEQS NLHTGQFRARG VN Sbjct 69 SGTDYQKVRADTDLTSTTFAKHLKGYIHDQGWQTYGEVVVRFEQSPNLHTGQFRARGAVN 128 Query 127 PDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRYARPQED 185 PD + AR +HAF AE G PM+DN +YRGGQG RP DEYYD+RY R Q+D Sbjct 129 PDSTAG----ESARAPRDHAFTAESGEPPMTDNPNYRGGQGPARPGDEYYDERYGR-QDD 183 Query 186 PRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYP-DQGGYPEQRGY 244 PRGG YPPE GGYPPQ DQG YP + G DQGGYP+Q GY Sbjct 184 PRGGQ-----------YPPEQGGYPPQ---------DQGGYPPRGGGYPDQGGYPDQGGY 223 Query 245 PEQRGYPDQRGYQDQGRGYPDQGQGGYPP-PYEQRPPVSPGPAAGYGAPGYDQGYRQSGG 303 P+Q GYPDQ GGYPP YEQRPP GP GYD+GY Q G Sbjct 224 PDQGGYPDQ---------------GGYPPQSYEQRPPAGYGPPPQ--GGGYDRGYGQPAG 266 Query 304 YGPSPGGGQPGYGGYG--------EYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYD 355 P G G +YGR RH++ G P+ R YP+QGGY Sbjct 267 GYPPAGPPAGPPPGGQPGYGGADYDYGRQAPRHDD--------YGRPDPRQGYPEQGGYP 318 Query 356 QGYQQGATTYGRQDYGGGADYTRYTES--PRVPGYAPQGGGYAEPAGRDYDYGQSGAPDY 413 + G YGR DYG DY + P GY P+ GGY EPAGRDY+YG DY Sbjct 319 EQGGYGGQAYGRPDYGQ-PDYGQQPGRGYPEQGGY-PEQGGYGEPAGRDYEYGG----DY 372 Query 414 GQPAPGGYSGYGQGGYGSAG-TSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGV 472 G PA G G G G AG T+VTLQLDDGSGRTYQLREG+N+IGRGQDAQFRLPDTGV Sbjct 373 GAPAGQGGYGGGYGADYPAGGTTVTLQLDDGSGRTYQLREGANVIGRGQDAQFRLPDTGV 432 Query 473 SRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 SRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVR+H Sbjct 433 SRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRVH 487 >gi|108797002|ref|YP_637199.1| FHA domain-containing protein [Mycobacterium sp. MCS] gi|119866086|ref|YP_936038.1| FHA domain-containing protein [Mycobacterium sp. KMS] gi|126432634|ref|YP_001068325.1| FHA domain-containing protein [Mycobacterium sp. JLS] gi|108767421|gb|ABG06143.1| FHA domain containing protein [Mycobacterium sp. MCS] gi|119692175|gb|ABL89248.1| FHA domain containing protein [Mycobacterium sp. KMS] gi|126232434|gb|ABN95834.1| FHA domain containing protein [Mycobacterium sp. JLS] Length=469 Score = 416 bits (1069), Expect = 5e-114, Method: Compositional matrix adjust. Identities = 305/540 (57%), Positives = 329/540 (61%), Gaps = 92/540 (17%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 LV R ERKLE TVGDAFAR+FGGSIVPQEVEALLRREA GI+ L R+LAPNEY+ITL Sbjct 3 LVDRFERKLESTVGDAFARVFGGSIVPQEVEALLRREAEAGIRELGRGRILAPNEYVITL 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 V D +K+ ADP+L +T FA+ L YI+EQGWQTYGDVVV+FEQ+ NLHTGQFRARG VN Sbjct 63 SVPDHKKVSADPDLTATTFAKHLEGYIREQGWQTYGDVVVKFEQAPNLHTGQFRARGAVN 122 Query 127 PDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP--DEYYDDRYARPQE 184 PD T P A +HAF AEPGV PMSDN +YRGG DEYYDD Y RPQE Sbjct 123 PDSTTGEP----APAHRDHAFPAEPGVPPMSDNPTYRGGGQGQGRPGDEYYDDGYGRPQE 178 Query 185 DPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGY 244 +PRG +PR YPPE QGGYP + GY Sbjct 179 EPRG-------QEPRAPYPPE-----------------------------QGGYPPRGGY 202 Query 245 PEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGY 304 PEQ GYPD RG GYPDQG Y G GYDQGYRQ G Sbjct 203 PEQGGYPD-RG------GYPDQGGYPDQGGYGGGYEQRGPGGYGPPGGGYDQGYRQGPGG 255 Query 305 GPSPGGGQPGYGGYG-----EYGR---GPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQ 356 P G +YGR GP RHE+G Y RP YPDQGGY Sbjct 256 YAPPPPPGGQPGYGAPGADYDYGRPPGGPGRHEDGGY----------GRPGYPDQGGYPD 305 Query 357 GYQQGATTYG----RQDYGGGADYTRYTESPRVPGYA-PQGG----GYAEPAGRDYDYGQ 407 G RQDYG DY R GYA P GG GY EPAGRDYDYGQ Sbjct 306 QGGYGGGYGAPAGGRQDYG--QDYGR--------GYAEPAGGYGDPGYGEPAGRDYDYGQ 355 Query 408 SGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRL 467 G Y G GT+VTLQLDDGSGRTYQLREG+N+IGRGQDAQFRL Sbjct 356 GAGGYGGGYGQADYPAAG------VGTTVTLQLDDGSGRTYQLREGANVIGRGQDAQFRL 409 Query 468 PDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 PDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVR+H Sbjct 410 PDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRVH 469 >gi|145221400|ref|YP_001132078.1| FHA domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145213886|gb|ABP43290.1| FHA domain containing protein [Mycobacterium gilvum PYR-GCK] Length=478 Score = 405 bits (1041), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 298/545 (55%), Positives = 335/545 (62%), Gaps = 93/545 (17%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 LV R ERKLE +VGDAFAR+FGGSIVP+EVE LLRREA G + + G +LAPN+Y+ITL Sbjct 3 LVDRFERKLEDSVGDAFARVFGGSIVPREVEVLLRREAETGARKVPGGHILAPNDYVITL 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 V DF+K+ ADP++ +T FA+ L YI EQGWQTYGDVVVRFEQS NLHTGQFRARG VN Sbjct 63 SVPDFQKVNADPDITATTFAKHLEGYIHEQGWQTYGDVVVRFEQSPNLHTGQFRARGAVN 122 Query 127 PDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQEDP 186 PD T ++ A P + AEPGV M+DN SYRGG GQGRPDEYY+ RP P Sbjct 123 PDATT----VEPAPPSRDATSQAEPGVPAMTDNPSYRGGPGQGRPDEYYN----RP---P 171 Query 187 RGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGYPE 246 P+ +GG + PE G + GYP H DQG YP Q +GYP Sbjct 172 ENRPEDEGGYNR-----PENRGDEQRGGYP---HGDQGGYPAQ-----------DQGYPP 212 Query 247 QRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYGP 306 + GYP+Q GYQDQG G YEQRPP GP GY GY QG G Sbjct 213 RGGYPEQGGYQDQGGYQGQGGYPP--QSYEQRPPAGYGPPPGYPDQGYRQGPGGYGPPPG 270 Query 307 SPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGY-DQG---YQQGA 362 G G Y +YGR P ++G Y PP RPAYPDQGGY DQG G Sbjct 271 GAPGYGGPAGDY-DYGRRP---DDGGY--GQPP-----RPAYPDQGGYPDQGGYGAPGGQ 319 Query 363 TTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGR-DYDYGQSGAPDYGQPAPGGY 421 +YGRQDY P G Y EPAG D YG+ G D Sbjct 320 QSYGRQDYA-----------------QPDYGRYGEPAGYGDQGYGEQGYGD--------- 353 Query 422 SGYGQGGYGS-------------------AGTSVTLQLDDGSGRTYQLREGSNIIGRGQD 462 GYG GYG+ AG +VTLQLDDGSGRTYQLREG+N+IGRGQD Sbjct 354 QGYGDQGYGAPAGQQGGYGGYGAGQGDYPAGATVTLQLDDGSGRTYQLREGANVIGRGQD 413 Query 463 AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEI 522 AQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEI Sbjct 414 AQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEI 473 Query 523 IVRMH 527 IVR+H Sbjct 474 IVRVH 478 >gi|315441720|ref|YP_004074599.1| FHA domain-containing protein [Mycobacterium sp. Spyr1] gi|315260023|gb|ADT96764.1| FHA domain-containing protein [Mycobacterium sp. Spyr1] Length=478 Score = 404 bits (1037), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 296/545 (55%), Positives = 333/545 (62%), Gaps = 93/545 (17%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 LV R ERKLE +VGDAFAR+FGGSIVP+EVE LLRREA + + G +L PN+Y+ITL Sbjct 3 LVDRFERKLEDSVGDAFARVFGGSIVPREVEVLLRREAETNARKVHGGHILVPNDYVITL 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 V DF+K+ ADP++ +T FA+ L YI EQGWQTYGDVVVRFEQS NLHTGQFRARG VN Sbjct 63 SVPDFQKVNADPDITATTFAKHLEGYIHEQGWQTYGDVVVRFEQSPNLHTGQFRARGAVN 122 Query 127 PDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQEDP 186 PD T ++ A P + AEPGV M+DN SYRGG GQGRPDEYY+ RP P Sbjct 123 PDATT----VEPAPPSRDATSQAEPGVPAMTDNPSYRGGPGQGRPDEYYN----RP---P 171 Query 187 RGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGYPE 246 P+ +GG + PE G + GYP H DQG YP Q +GYP Sbjct 172 ENRPEDEGGYNR-----PENRGDEQRGGYP---HGDQGGYPAQ-----------DQGYPP 212 Query 247 QRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYGP 306 + GYP+Q GYQDQG G YEQRPP GP GY GY QG G Sbjct 213 RGGYPEQGGYQDQGGYQGQGGYPP--QSYEQRPPAGYGPPPGYPDQGYRQGPGGYGPPPG 270 Query 307 SPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGY-DQG---YQQGA 362 G G Y +YGR P ++G Y PP RPAYPDQGGY DQG G Sbjct 271 GAPGYGGPAGDY-DYGRRP---DDGGY--GQPP-----RPAYPDQGGYPDQGGYGAPGGQ 319 Query 363 TTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGR-DYDYGQSGAPDYGQPAPGGY 421 +YGRQDY P G Y EPAG D YG+ G D Sbjct 320 QSYGRQDYA-----------------QPDYGRYGEPAGYGDQGYGEQGYGD--------- 353 Query 422 SGYGQGGYGS-------------------AGTSVTLQLDDGSGRTYQLREGSNIIGRGQD 462 GYG GYG+ AG +VTLQLDDGSGRTYQLREG+N+IGRGQD Sbjct 354 QGYGDQGYGAPAGQQGGYGGYGAGQGDYPAGATVTLQLDDGSGRTYQLREGANVIGRGQD 413 Query 463 AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEI 522 AQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEI Sbjct 414 AQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEI 473 Query 523 IVRMH 527 IVR+H Sbjct 474 IVRVH 478 >gi|289748482|ref|ZP_06507860.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289689069|gb|EFD56498.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=246 Score = 383 bits (984), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 245/246 (99%), Positives = 245/246 (99%), Gaps = 0/246 (0%) Query 282 SPGPAAGYGAPGYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGP 341 SP PAAGYGAPGYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGP Sbjct 1 SPRPAAGYGAPGYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGP 60 Query 342 PEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGR 401 PEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGR Sbjct 61 PEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGR 120 Query 402 DYDYGQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQ 461 DYDYGQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQ Sbjct 121 DYDYGQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQ 180 Query 462 DAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSE 521 DAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSE Sbjct 181 DAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSE 240 Query 522 IIVRMH 527 IIVRMH Sbjct 241 IIVRMH 246 >gi|240172389|ref|ZP_04751048.1| hypothetical protein MkanA1_23943 [Mycobacterium kansasii ATCC 12478] Length=547 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 218/296 (74%), Positives = 228/296 (78%), Gaps = 20/296 (6%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQK LVQR+ERKLE TVGDAFAR+FGGSIVPQEVEALLRREAADG++SL+GNRLLAPN Sbjct 1 MGSQKGLVQRIERKLESTVGDAFARMFGGSIVPQEVEALLRREAADGVRSLEGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITL VHD EKLGADP+L S FAR LADYIQEQGWQTYGDVVVRFEQS NLHTGQFR Sbjct 61 EYIITLSVHDSEKLGADPDLTSKAFARYLADYIQEQGWQTYGDVVVRFEQSPNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA 180 ARGTVNPDVE V ARPQSNHAFGAEPGV PM+DNSSYRGG GQG PDEYYDDRYA Sbjct 121 ARGTVNPDVEPRRTVTAYARPQSNHAFGAEPGVPPMTDNSSYRGGPGQG-PDEYYDDRYA 179 Query 181 RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQ-GDYPEQIGYPDQGGYP 239 RPQE+PR G P G G P G P P PR PDQ G YPEQ GY DQGGYP Sbjct 180 RPQEEPRSG-SPGGPDPRGGYPPEGGGYPPQPGYPPPPRQPDQGGGYPEQRGYQDQGGYP 238 Query 240 EQRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYD 295 EQ GYP+Q GYP+QRGYQD QGGYP YEQRPP GY PGYD Sbjct 239 EQ-GYPDQGGYPEQRGYQD---------QGGYPSSYEQRPP-------GYSGPGYD 277 >gi|254773076|ref|ZP_05214592.1| hypothetical protein MaviaA2_00119 [Mycobacterium avium subsp. avium ATCC 25291] Length=280 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 201/281 (72%), Positives = 223/281 (80%), Gaps = 12/281 (4%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 M SQ+ LV R+ERKLE TV +AFAR+FGG IVPQEVEALL REA DG+Q L GNRLLAPN Sbjct 1 MSSQRGLVARIERKLEATVDNAFARVFGGPIVPQEVEALLCREARDGVQKLHGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLG+HDFEK+ ADP+L S+ FAR LADYI EQGWQTYG+VVVRFEQSS+L TGQ+R Sbjct 61 EYIITLGMHDFEKVSADPDLTSSAFARYLADYIHEQGWQTYGEVVVRFEQSSSLRTGQYR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRP-DEYYDDRY 179 A G VNPDV+ P V D RPQSN+AFG E GVAPM+DNSSYRG QG GRP DEYYD+RY Sbjct 121 ACGAVNPDVQPRPTVDDPVRPQSNNAFGEERGVAPMTDNSSYRGAQGPGRPGDEYYDERY 180 Query 180 ARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYP------ 233 RPQ+D RGG +PQG D RGGYPPE GGYPPQ GYP PRHP+QG YPEQ GYP Sbjct 181 GRPQDDARGGSEPQGAPDQRGGYPPEQGGYPPQQGYPPPRHPEQGGYPEQGGYPPPQSYQ 240 Query 234 DQGGYPEQR-GYPE--QRGY-PDQRGYQDQGRGYPDQGQGG 270 + GGYP+QR GYPE Q GY P Q GY DQ RGYP+ QGG Sbjct 241 EHGGYPDQRGGYPEPGQAGYPPQQHGYPDQ-RGYPEPAQGG 280 >gi|289748483|ref|ZP_06507861.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289689070|gb|EFD56499.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=146 Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%) Query 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN Sbjct 1 MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN 60 Query 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR Sbjct 61 EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR 120 Query 121 ARGTVNPDVETHPPVIDCARPQSNHA 146 ARGTVNPDVETHPPVIDCARPQSNHA Sbjct 121 ARGTVNPDVETHPPVIDCARPQSNHA 146 >gi|111020690|ref|YP_703662.1| hypothetical protein RHA1_ro03703 [Rhodococcus jostii RHA1] gi|110820220|gb|ABG95504.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=434 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 235/543 (44%), Positives = 280/543 (52%), Gaps = 135/543 (24%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 +VQR ERKL+ VGDAFAR+FGG +VPQEVEA L++EA+D IQ L G LLAPN Y+I + Sbjct 3 IVQRFERKLQGAVGDAFARVFGGGVVPQEVEAALQQEASDRIQQLDGGHLLAPNSYVIAI 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D E+L AD +L FAR L D+I++QGWQTYG + V FE S +LHTGQFR RG+V+ Sbjct 63 NNSDHEELAADRDLTVKAFARHLEDFIRDQGWQTYGPIHVAFEPSPSLHTGQFRTRGSVD 122 Query 127 PDV---------ETHPPVIDCARPQSNHA-FGAEPGVAPMSDNSSYRGGQGQGRPDEYYD 176 PD PP RPQ+ + PG PM+ NS Y Sbjct 123 PDAGRPGAATPGRPEPPRGPAPRPQAPFVPVTSNPGAGPMTQNSGYD------------- 169 Query 177 DRYARPQEDPRGG--PDPQ--------GGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDY 226 P +P G PDPQ G D R YP GY Q GY R + G Sbjct 170 -----PSREPAGNRNPDPQYARNGHAHAGQDQR--YPQ---GY--QNGYDRGGYQQGGYD 217 Query 227 PEQIGYPDQGGYPEQRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPA 286 +Q +GGYP+ Y G+ Y QG P YEQ Sbjct 218 QQQYPDDQRGGYPQDAAY---------------GQAYD---QGAQAPGYEQPADAGYDYQ 259 Query 287 AGYGAPGYD-QGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQR 345 G GYD Q Y Q G PAR+ +GSY +G Sbjct 260 QGGYQQGYDPQAYDQQG---------------------APARYPDGSYAEAG-------- 290 Query 346 PAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDY 405 Y GYDQGY +G GY Q GGY + A Y Sbjct 291 --YQQPQGYDQGYDRG-------------------------GY--QQGGYDQQA-----Y 316 Query 406 GQSGAPDYGQPAPGGYSGYGQGGYGSAG--TSVTLQLDDGSGRTYQLREGSNIIGRGQDA 463 Q G DY Q GYGQ Y G + TLQL+DGSGR +QLREG+NIIGRGQ+A Sbjct 317 DQQGYADYDQ------GGYGQQAYAPDGHTFTATLQLEDGSGRHFQLREGNNIIGRGQEA 370 Query 464 QFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEII 523 QFRLPDTGVSRRH++IRWDGQVA+L+DL STNGTTVN APVQ+WQLADGD+IR GHSEI+ Sbjct 371 QFRLPDTGVSRRHIDIRWDGQVAMLSDLGSTNGTTVNGAPVQDWQLADGDIIRAGHSEIL 430 Query 524 VRM 526 VR+ Sbjct 431 VRI 433 >gi|134096668|ref|YP_001102329.1| FHA domain-containing protein [Saccharopolyspora erythraea NRRL 2338] gi|133909291|emb|CAL99403.1| FHA domain containing protein [Saccharopolyspora erythraea NRRL 2338] Length=437 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 222/525 (43%), Positives = 263/525 (51%), Gaps = 99/525 (18%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 LVQR ER+LE VG+ FAR+FGG +VPQEV L+REA I+ L G RLLA N Y++ L Sbjct 3 LVQRFERRLEGIVGNGFARVFGGKVVPQEVAQALQREAELQIRELAGGRLLACNHYVVQL 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D +L + + + A + +++ EQGW TYGDVVV E+S LHTGQFR R +V+ Sbjct 63 STPDHARLAGEEDRVTDLLADCVQEHLTEQGWDTYGDVVVSLERSETLHTGQFRIRSSVD 122 Query 127 PDVETHPPVIDCA--RPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQE 184 PDV P A RP S PG P D + GQ P Sbjct 123 PDVTRRPATPRTAGDRPMSQ-----PPGHYPQGDPYGQQQGQYGYDQGYGQGQYGQDPNY 177 Query 185 DPRGGPDPQGGSDPRGGYPP--ETGGYPPQ-PGYPRPRHPDQGDYPEQIGYPDQ-GGYPE 240 G PP + GGYP Q PGY DQG YP+Q GY Q GY Sbjct 178 G-------------YGQQPPGYDQGGYPQQPPGY------DQG-YPQQ-GYGQQPPGY-- 214 Query 241 QRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQ 300 +GY + GY +GY Q GY QGGYP Q+PP + G PGYDQGY Q Sbjct 215 DQGYGQPAGY--DQGYGQQPGGY---DQGGYP----QQPPAAYDQGYGQQPPGYDQGYGQ 265 Query 301 SGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQ 360 GY GYG+ PP GYDQGY Q Sbjct 266 PAGYDQ----------GYGQQ----------------PP-------------GYDQGYPQ 286 Query 361 GATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGG 420 YG D GG P PG P+ G +P G Y APGG Sbjct 287 QPGQYGY-DQGGYGQQPGGAYPPSQPGGFPEQGYPQQPGGA-----------YPPSAPGG 334 Query 421 YSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 Y + TLQLDDGS R+Y L+ GSN+IGRGQ+ QFRLPDTGVSR+H+EI Sbjct 335 YP-----EAAPRQLTATLQLDDGSNRSYTLQHGSNVIGRGQEGQFRLPDTGVSRKHIEIT 389 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVR 525 WDGQ A+LADL STNGTTVN PVQ WQLADGDVIR+GHS ++ R Sbjct 390 WDGQSAMLADLGSTNGTTVNGTPVQTWQLADGDVIRVGHSSLVFR 434 >gi|254773075|ref|ZP_05214591.1| xyppx repeat-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length=200 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 144/202 (72%), Positives = 154/202 (77%), Gaps = 20/202 (9%) Query 326 ARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRV 385 AR +EG Y P PEQRPAYP+QGG YGRQDYG A+YT+Y E + Sbjct 19 ARPDEGGYAP------PEQRPAYPEQGGGYDQGYPQGGGYGRQDYGS-AEYTQYAEHAQG 71 Query 386 PGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSG 445 YAP GGGY E G +Y+YGQ PA YGQGGYGS GT+VTLQLDDGSG Sbjct 72 ATYAPPGGGYPEAPGSEYEYGQ--------PAD-----YGQGGYGSTGTTVTLQLDDGSG 118 Query 446 RTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQ 505 RTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALL+DLNSTNGTTVNNAPVQ Sbjct 119 RTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTVNNAPVQ 178 Query 506 EWQLADGDVIRLGHSEIIVRMH 527 EWQLADGDVIRLGHSEIIVR+H Sbjct 179 EWQLADGDVIRLGHSEIIVRIH 200 >gi|320089911|pdb|3PO8|A Chain A, Structural And Functional Analysis Of Phosphothreonine-Dependent Fha Domain Interactions gi|320089912|pdb|3POA|A Chain A, Structural And Functional Analysis Of Phosphothreonine-Dependent Fha Domain Interactions Length=100 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%) Query 431 SAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLAD 490 SAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLAD Sbjct 1 SAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLAD 60 Query 491 LNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 LNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH Sbjct 61 LNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 97 >gi|169627146|ref|YP_001700795.1| hypothetical protein MAB_0039c [Mycobacterium abscessus ATCC 19977] gi|169239113|emb|CAM60141.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=452 Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 106/184 (58%), Positives = 124/184 (68%), Gaps = 14/184 (7%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 +VQR ERKLE VGDAFAR+FGGSIVPQEV+A LRREAADG++S RLLAPNE+ + L Sbjct 3 IVQRFERKLEDVVGDAFARVFGGSIVPQEVQASLRREAADGVRSAGQGRLLAPNEFFVLL 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D EK D +L FA L +YI++QGWQTYG+VVVRFEQS NLHTGQFR RG VN Sbjct 63 STADHEKAADDRDLNPDTFAELLREYIRDQGWQTYGEVVVRFEQSPNLHTGQFRTRGVVN 122 Query 127 PDVETHPP--VIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYY---DDRYAR 181 PD + P + A P + +PG APM+DN G QGRP E Y DDRY R Sbjct 123 PDSKRDRPHGAVTTAPPTPD----PQPG-APMTDNP----GPQQGRPGEEYGREDDRYGR 173 Query 182 PQED 185 P +D Sbjct 174 PDQD 177 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/157 (65%), Positives = 114/157 (73%), Gaps = 26/157 (16%) Query 384 RVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQGGYGSA----------- 432 R P Y PQ GGY P + G G+P+YG Y QGGY S+ Sbjct 309 RPPAY-PQQGGYGAPPQQ----GGYGSPEYGD--------YEQGGYQSSPDYGAPAGGPG 355 Query 433 --GTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLAD 490 T+VTLQLDDGSGRTYQLREG+N+IGRGQDAQFRLPDTGVSRRHLE+R+DG ALL+D Sbjct 356 GGRTTVTLQLDDGSGRTYQLREGTNVIGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSD 415 Query 491 LNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 LNSTNGTTVNNAPV EWQLADGD+IRLGHSEIIVR+ Sbjct 416 LNSTNGTTVNNAPVTEWQLADGDIIRLGHSEIIVRVQ 452 >gi|312137542|ref|YP_004004878.1| hypothetical protein REQ_00290 [Rhodococcus equi 103S] gi|311886881|emb|CBH46189.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=446 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 116/243 (48%), Positives = 138/243 (57%), Gaps = 22/243 (9%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 +VQR ERKL+ VGDAFAR+FGG +VPQEVEA L+REA D +Q L G LAPN Y+IT+ Sbjct 3 IVQRFERKLQGAVGDAFARVFGGGVVPQEVEAALQREATDRVQQLDGGHYLAPNSYVITI 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D KL +D EL FAR L YI+EQGWQTYGD+ VRFE S LHTGQFR G+V+ Sbjct 63 NESDHAKLASDHELTVKSFARHLEGYIREQGWQTYGDIDVRFEASPTLHTGQFRTTGSVD 122 Query 127 PDVETHPPVIDCARPQSNHA---FGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYAR-- 181 PD P++ A PG PM+ NS G+ E DDR AR Sbjct 123 PDAHRGDAGASGPAPRARRAPTPVSPTPGAGPMTQNSGNEPGR------EQRDDRGARNG 176 Query 182 -PQEDPRGGPDPQGGSDPRGGYPPETGGYP---PQPGYPRPRHPDQGDYPEQIGYPDQGG 237 D GP QGG +GGY + GGY PQ GY +PR+ Q Y QGG Sbjct 177 SAHPDQAQGPADQGGYQDQGGY-QDQGGYQQDYPQ-GYAQPRYDQQQAYGAA-----QGG 229 Query 238 YPE 240 YP+ Sbjct 230 YPQ 232 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/140 (67%), Positives = 106/140 (76%), Gaps = 15/140 (10%) Query 402 DYDY--GQSGAPDYGQPA-------PGGYSGYGQG---GYG-SAGTSVT--LQLDDGSGR 446 DYDY G+ DY Q PG GYGQG GY AG + T LQL+DGSGR Sbjct 306 DYDYQQGEYQQGDYDQAGYNQAYSQPGYEQGYGQGYQAGYTPEAGRTFTATLQLEDGSGR 365 Query 447 TYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQE 506 YQLR+G+NI+GRGQDAQFRLPDTGVSRRH +IRWDGQVA+L+DL STNGTTVN +PVQ+ Sbjct 366 FYQLRDGNNIVGRGQDAQFRLPDTGVSRRHFDIRWDGQVAMLSDLGSTNGTTVNGSPVQD 425 Query 507 WQLADGDVIRLGHSEIIVRM 526 WQLADGDVIR GHSEI+VR+ Sbjct 426 WQLADGDVIRAGHSEILVRI 445 >gi|325677492|ref|ZP_08157156.1| FHA domain protein [Rhodococcus equi ATCC 33707] gi|325551739|gb|EGD21437.1| FHA domain protein [Rhodococcus equi ATCC 33707] Length=440 Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 113/240 (48%), Positives = 135/240 (57%), Gaps = 22/240 (9%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 +VQR ERKL+ VGDAFAR+FGG +VPQEVEA L+REA D +Q L G LAPN Y+IT+ Sbjct 3 IVQRFERKLQGAVGDAFARVFGGGVVPQEVEAALQREATDRVQQLDGGHYLAPNSYVITI 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D KL +D EL FAR L YI+EQGWQTYGD+ VRFE S LHTGQFR G+V+ Sbjct 63 NESDHAKLASDHELTVKSFARHLEGYIREQGWQTYGDIDVRFEASPTLHTGQFRTTGSVD 122 Query 127 PDVETHPPVIDCARPQSNHA---FGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYAR-- 181 PD P++ A PG PM+ NS G+ E DDR AR Sbjct 123 PDAHRGDAGASGPAPRARRAPTPVSPTPGAGPMTQNSGNEPGR------EQRDDRGARNG 176 Query 182 -PQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPE 240 D GP QGG +GGY + YP GY +PR+ Q Y QGGYP+ Sbjct 177 SAHPDQAQGPGDQGGYQDQGGYQQD---YP--QGYAQPRYDQQQAYGAA-----QGGYPQ 226 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/140 (67%), Positives = 106/140 (76%), Gaps = 15/140 (10%) Query 402 DYDY--GQSGAPDYGQPA-------PGGYSGYGQG---GYG-SAGTSVT--LQLDDGSGR 446 DYDY G+ DY Q PG GYGQG GY AG + T LQL+DGSGR Sbjct 300 DYDYQQGEYQQGDYDQAGYNQAYSQPGYEQGYGQGYQAGYTPEAGRTFTATLQLEDGSGR 359 Query 447 TYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQE 506 YQLR+G+NI+GRGQDAQFRLPDTGVSRRH +IRWDGQVA+L+DL STNGTTVN +PVQ+ Sbjct 360 FYQLRDGNNIVGRGQDAQFRLPDTGVSRRHFDIRWDGQVAMLSDLGSTNGTTVNGSPVQD 419 Query 507 WQLADGDVIRLGHSEIIVRM 526 WQLADGDVIR GHSEI+VR+ Sbjct 420 WQLADGDVIRAGHSEILVRI 439 >gi|54022050|ref|YP_116292.1| hypothetical protein nfa860 [Nocardia farcinica IFM 10152] gi|54013558|dbj|BAD54928.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=476 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/156 (54%), Positives = 103/156 (67%), Gaps = 0/156 (0%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 +V R ER+L+ VGD FAR+FGGS+VPQEVEA L+REAAD +Q L G LLAPN Y+IT+ Sbjct 3 IVSRFERRLQGAVGDVFARVFGGSVVPQEVEAALQREAADNVQDLGGGHLLAPNSYVITI 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D ++L AD +L + FA+ L DYI++QGWQTYG+V V FE S LHTGQFRA G V+ Sbjct 63 NSSDHQQLDADHDLTTRAFAKHLQDYIRDQGWQTYGEVHVAFEASPTLHTGQFRASGRVD 122 Query 127 PDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSY 162 PDV P +PG PM+ NS Y Sbjct 123 PDVGRRATPARSPEPTPPRPANPQPGAGPMTQNSGY 158 >gi|226303523|ref|YP_002763481.1| hypothetical protein RER_00340 [Rhodococcus erythropolis PR4] gi|226182638|dbj|BAH30742.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=472 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/187 (56%), Positives = 123/187 (66%), Gaps = 27/187 (14%) Query 351 QGGYDQ-GYQQ-------GATTYGRQDYG-GGADYTRYTESPRVPGYAPQGGGYAEPAGR 401 QGGYDQ GYQQ Y +Q Y GG D YT+ P QGG + + Sbjct 301 QGGYDQQGYQQPYNGQSYDQPGYDQQSYQQGGYDQQAYTQQPYEQAGYEQGGNFEQTQA- 359 Query 402 DYDYGQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVT--LQLDDGSGRTYQLREGSNIIGR 459 Y Q G Y QP QGGY S+T LQL+DGSGR +QLR+GSN+IGR Sbjct 360 ---YPQQG---YAQP---------QGGYAPTAQSLTATLQLEDGSGRHFQLRDGSNVIGR 404 Query 460 GQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGH 519 GQ+AQFRLPDTGVSRRH++IRWDG+ A+L+DL STNGTTVN APVQ+WQLADGD+IR GH Sbjct 405 GQEAQFRLPDTGVSRRHIDIRWDGRTAMLSDLGSTNGTTVNGAPVQDWQLADGDIIRAGH 464 Query 520 SEIIVRM 526 SEI+VR+ Sbjct 465 SEILVRI 471 >gi|226362929|ref|YP_002780709.1| hypothetical protein ROP_35170 [Rhodococcus opacus B4] gi|226241416|dbj|BAH51764.1| hypothetical protein [Rhodococcus opacus B4] Length=432 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 80/106 (76%), Positives = 93/106 (88%), Gaps = 2/106 (1%) Query 423 GYGQGGYGSAG--TSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIR 480 GYGQ Y G + TLQL+DGSGR +QLREG+NIIGRGQ+AQFRLPDTGVSRRH++IR Sbjct 326 GYGQQAYAPDGHTFTATLQLEDGSGRHFQLREGNNIIGRGQEAQFRLPDTGVSRRHIDIR 385 Query 481 WDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRM 526 WDGQVA+L+DL STNGTTVN APVQ+WQLADGD+IR GHSEI+VR+ Sbjct 386 WDGQVAMLSDLGSTNGTTVNGAPVQDWQLADGDIIRAGHSEILVRI 431 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/166 (52%), Positives = 107/166 (65%), Gaps = 10/166 (6%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 +VQR ERKL+ VGDAFAR+FGG +VPQEVEA L++EA+D I+ L G LLAPN Y+I + Sbjct 3 IVQRFERKLQGAVGDAFARVFGGGVVPQEVEAALQQEASDRIRQLDGGHLLAPNSYVIAI 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D E+L AD EL FAR L D+I++QGWQTYG + V FE S +LHTGQFR RG+V+ Sbjct 63 NNSDHEELAADRELTVKAFARHLEDFIRDQGWQTYGPIHVAFEPSPSLHTGQFRTRGSVD 122 Query 127 PDV---------ETHPPVIDCARPQSNHA-FGAEPGVAPMSDNSSY 162 PD PP RPQ+ + PG PM+ NS Y Sbjct 123 PDAGRQGAATPGRPEPPRGPAPRPQAPFVPVTSNPGAGPMTQNSGY 168 >gi|229492081|ref|ZP_04385892.1| FHA domain protein [Rhodococcus erythropolis SK121] gi|229321018|gb|EEN86828.1| FHA domain protein [Rhodococcus erythropolis SK121] Length=160 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 101/180 (57%), Positives = 119/180 (67%), Gaps = 30/180 (16%) Query 350 DQGGYDQ-GYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQS 408 DQ GYDQ YQQG G D YT+ P G QGG + + Y Q Sbjct 7 DQPGYDQQSYQQG-----------GYDQQAYTQQPYEQGGYEQGGNFEQTQA----YPQQ 51 Query 409 GAPDYGQPAPGGYSGYGQGGYGSAGTSVT--LQLDDGSGRTYQLREGSNIIGRGQDAQFR 466 G Y QP QGGY S+T LQL+DGSGR +QLR+GSN+IGRGQ+AQFR Sbjct 52 G---YAQP---------QGGYAPTAQSLTATLQLEDGSGRHFQLRDGSNVIGRGQEAQFR 99 Query 467 LPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRM 526 LPDTGVSRRH++IRWDG+ A+L+DL STNGTTVN APVQ+WQLADGD+IR GHSEI+VR+ Sbjct 100 LPDTGVSRRHIDIRWDGRTAMLSDLGSTNGTTVNGAPVQDWQLADGDIIRAGHSEILVRI 159 >gi|326383939|ref|ZP_08205623.1| Forkhead-associated protein [Gordonia neofelifaecis NRRL B-59395] gi|326197398|gb|EGD54588.1| Forkhead-associated protein [Gordonia neofelifaecis NRRL B-59395] Length=425 Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 100/180 (56%), Positives = 115/180 (64%), Gaps = 23/180 (12%) Query 350 DQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSG 409 DQGGYDQ Y Q Y +Q Y YAPQG Y + G+ Y Q G Sbjct 267 DQGGYDQQYAQ-QPQYDQQGYAQQP------YDQGQQQYAPQG--YDQRYGQQPQYDQQG 317 Query 410 --APDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRL 467 AP YGQPA G A +++TL L+DGS RT+ LR+GSN+IGRGQDAQFRL Sbjct 318 YAAPAYGQPA------------GYAPSAITLVLEDGSNRTFSLRQGSNVIGRGQDAQFRL 365 Query 468 PDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 PDTGVSRRH+EIRWDGQ A+L DLNSTNGTTVN+ V W+LADGD IRLGHS+I VR Sbjct 366 PDTGVSRRHVEIRWDGQTAMLTDLNSTNGTTVNDLQVSSWELADGDRIRLGHSDITVRFQ 425 >gi|229492213|ref|ZP_04386021.1| FHA domain protein [Rhodococcus erythropolis SK121] gi|229320839|gb|EEN86652.1| FHA domain protein [Rhodococcus erythropolis SK121] Length=287 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 119/275 (44%), Positives = 151/275 (55%), Gaps = 31/275 (11%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 +VQR ERKL+ VGDAFAR+FGG +VPQEVEA L++EA D ++ L G LLAPN Y+IT+ Sbjct 23 IVQRFERKLQGAVGDAFARVFGGGVVPQEVEAALQQEARDRVEHLGGGILLAPNNYVITI 82 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D E+L AD EL + F+R L D+I++QGWQTYGD+ V FE S LHTGQFR RGTV+ Sbjct 83 NNSDHEELAADRELTTKAFSRHLQDFIRDQGWQTYGDISVTFEPSPTLHTGQFRTRGTVD 142 Query 127 PDVE-------THPPVIDCAR------------PQSNHAFGAEPGVAPMSDNSSYRGGQG 167 PD + +H P + P ++ ++PG PM+ NS Y Sbjct 143 PDGDAEQASPPSHVPQVSSRPPQRPPQRPAPIVPPVSNPVPSQPGAGPMTQNSGY----- 197 Query 168 QGRPDEYYDDRYARPQEDPRGG--PDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGD 225 P R PQ+ R G D G + P+G P GY GY DQ Sbjct 198 --EPSREPAGRQPEPQQPARNGYSHDDGGYAAPQGQEAPYQNGYDRGDGY--RTGDDQQG 253 Query 226 YPEQIGYPDQGGYPEQRGYPEQRGYPDQRGYQDQG 260 Y +Q G DQ YP Q+ EQ GY DQ+ Y QG Sbjct 254 YNQQQGGYDQQAYPNQQQPYEQAGY-DQQSYDQQG 287 >gi|296137783|ref|YP_003645026.1| FHA domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296025917|gb|ADG76687.1| FHA domain containing protein [Tsukamurella paurometabola DSM 20162] Length=428 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 141/323 (44%), Positives = 174/323 (54%), Gaps = 31/323 (9%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 ++QR ERKLE VGD FAR+FGG +VPQEVEA L+REA D +Q L L PN+Y+I + Sbjct 3 ILQRFERKLEGAVGDGFARVFGGKVVPQEVEAALQREAEDALQPLGDGAYLVPNKYVIAV 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D + AD +L F++ L +YI + GWQTYGDVVV FEQS LHTGQFRARGTV+ Sbjct 63 SPTDQQTFEADRDLAIRAFSKHLDEYIHDNGWQTYGDVVVHFEQSPQLHTGQFRARGTVD 122 Query 127 PDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQEDP 186 PD P + RP AE G M++N Y G+ G+ + + + Sbjct 123 PDAV--PQNLVPQRP------PAESGADSMTNNPGYDQGRHGGQQYDDQGGYQQQGYDQQ 174 Query 187 RGGPDPQGGSDPRG----GYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQR 242 G P G + GY G Q GY +P + DQG Y +Q Y DQGGY +Q Sbjct 175 GYGQQPPQGGYDQNYAQQGYDQNYG----QGGYQQPAY-DQGGYQQQPAY-DQGGYQQQP 228 Query 243 GYPEQRGYPDQRGYQDQGRGYPDQGQGGY--PPPYE---QRPPVSPGPAAGYGAPGYDQG 297 GY + GY Q GY DQG P QGGY P Y+ Q+P Y PGYDQG Sbjct 229 GYDQ--GY-QQPGY-DQGYQQPAYDQGGYQQQPGYDQGYQQPAYDQNYGQNYAQPGYDQG 284 Query 298 YRQSGGYGPSPGGGQPGY--GGY 318 Y+Q GY G QP Y GGY Sbjct 285 YQQQPGY--DQGYQQPAYDQGGY 305 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 124/282 (44%), Positives = 143/282 (51%), Gaps = 73/282 (25%) Query 267 GQGGYPPP------YEQRPPVS-------PGPAAGYGAPGYDQGYRQ----SGGYGPSPG 309 GQGGY P Y+Q+P PG GY PGYDQGY+Q GGY PG Sbjct 199 GQGGYQQPAYDQGGYQQQPAYDQGGYQQQPGYDQGYQQPGYDQGYQQPAYDQGGYQQQPG 258 Query 310 GGQ----PGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTY 365 Q P Y YG+ A+ P Y Q GYDQGYQQ Sbjct 259 YDQGYQQPAYDQ--NYGQNYAQ--------------PGYDQGYQQQPGYDQGYQQ----- 297 Query 366 GRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYG 425 P Y GGY + G D +Y Q G G GG Sbjct 298 --------------------PAYDQ--GGYQQQPGYDQNYAQPGYDQGGYGQQGG----- 330 Query 426 QGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQV 485 SVTL L+DGS RT+ LREG+N+IGRGQDAQFRLPDTGVSRRH+EIRWDG Sbjct 331 ----YQQPQSVTLYLEDGSNRTFALREGANVIGRGQDAQFRLPDTGVSRRHVEIRWDGYA 386 Query 486 ALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH 527 A+L DL STNGT+VN+ PV W+LADGD IR+GHS+I+VR Sbjct 387 AVLNDLGSTNGTSVNDVPVSNWELADGDRIRVGHSDIVVRFQ 428 >gi|302531412|ref|ZP_07283754.1| FHA domain-containing protein [Streptomyces sp. AA4] gi|302440307|gb|EFL12123.1| FHA domain-containing protein [Streptomyces sp. AA4] Length=408 Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 105/185 (57%), Positives = 119/185 (65%), Gaps = 16/185 (8%) Query 348 YPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQ 407 Y QGGYDQGY Q Q YG ++P+ GY QG G A AG D YGQ Sbjct 234 YGQQGGYDQGYGQAPQAGYDQGYG---------QAPQA-GY-DQGYGQAPQAGYDQGYGQ 282 Query 408 SGAPDY--GQP-APGGYSGYGQGGYGSAGTSV--TLQLDDGSGRTYQLREGSNIIGRGQD 462 G D GQP A G Y Q G +AG + +LQLDDGS RTY L++G N++GRGQD Sbjct 283 QGGYDQYGGQPQAAYGQDPYAQQGAPAAGRQLQASLQLDDGSNRTYSLKQGGNVVGRGQD 342 Query 463 AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEI 522 A FRLPDTGVSRRHLEI WDGQ A LAD+ STNGTTVN PVQ WQLADGDVIR+GHS + Sbjct 343 ADFRLPDTGVSRRHLEITWDGQSATLADIGSTNGTTVNGTPVQTWQLADGDVIRVGHSSL 402 Query 523 IVRMH 527 + R Sbjct 403 VFRTQ 407 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 57/122 (47%), Positives = 83/122 (69%), Gaps = 0/122 (0%) Query 8 VQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLG 67 V+R +R+LE VG+ FAR+FGG++V QEV L RE + ++ L G R LAPN YI++LG Sbjct 4 VERFDRRLENLVGNTFARMFGGNVVTQEVAVALEREGEENVRELAGGRQLAPNHYIVSLG 63 Query 68 VHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNP 127 D +++ D + + AR +A+++ QGW TYGDVVV E++ LHTGQF+ R +V+P Sbjct 64 AADHDRMAGDEQRVTGVLARAVAEHLAAQGWDTYGDVVVSLERNEALHTGQFKTRSSVDP 123 Query 128 DV 129 D Sbjct 124 DA 125 >gi|291009306|ref|ZP_06567279.1| FHA domain-containing protein [Saccharopolyspora erythraea NRRL 2338] Length=298 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 132/254 (52%), Positives = 153/254 (61%), Gaps = 35/254 (13%) Query 292 PGYDQGYRQSGGYGPSPGGGQPGYG---GYGE-YGRGPARHEEGSYVPSGPPGPPEQRPA 347 PGYDQGY Q G YG P G GYG GY + YG+ P +++G Y P+Q PA Sbjct 57 PGYDQGYPQQG-YGQQPPGYDQGYGQPAGYDQGYGQQPGGYDQGGY--------PQQPPA 107 Query 348 YPDQG------GYDQGYQQGA---TTYGRQDYGGGADYTRYTESPRVPG-YAPQGGGYAE 397 DQG GYDQGY Q A YG+Q G Y P+ PG Y GGY + Sbjct 108 AYDQGYGQQPPGYDQGYGQPAGYDQGYGQQPPGYDQGY------PQQPGQYGYDQGGYGQ 161 Query 398 PAGRDYDYGQSGA-PDYGQPA-PGG-YSGYGQGGYGSAG---TSVTLQLDDGSGRTYQLR 451 G Y Q G P+ G P PGG Y GGY A + TLQLDDGS R+Y L+ Sbjct 162 QPGGAYPPSQPGGFPEQGYPQQPGGAYPPSAPGGYPEAAPRQLTATLQLDDGSNRSYTLQ 221 Query 452 EGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLAD 511 GSN+IGRGQ+ QFRLPDTGVSR+H+EI WDGQ A+LADL STNGTTVN PVQ WQLAD Sbjct 222 HGSNVIGRGQEGQFRLPDTGVSRKHIEITWDGQSAMLADLGSTNGTTVNGTPVQTWQLAD 281 Query 512 GDVIRLGHSEIIVR 525 GDVIR+GHS ++ R Sbjct 282 GDVIRVGHSSLVFR 295 >gi|262200075|ref|YP_003271283.1| Forkhead-associated protein [Gordonia bronchialis DSM 43247] gi|262083422|gb|ACY19390.1| Forkhead-associated protein [Gordonia bronchialis DSM 43247] Length=433 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/123 (66%), Positives = 92/123 (75%), Gaps = 4/123 (3%) Query 405 YGQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQ 464 YGQ DY Q P YG+ G A +S+TL L+DGS RT+QL EGSN+IGRGQDAQ Sbjct 315 YGQQPGYDYQQQDPA----YGRAPAGYAPSSITLLLEDGSNRTFQLHEGSNVIGRGQDAQ 370 Query 465 FRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIV 524 FRLPDTGVSRRH+EIRWDG A+L DLNSTNGTTVN+ V W+LADGD IR+GHS+I V Sbjct 371 FRLPDTGVSRRHVEIRWDGNTAMLTDLNSTNGTTVNDVQVNSWELADGDRIRVGHSDITV 430 Query 525 RMH 527 R Sbjct 431 RFQ 433 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/124 (51%), Positives = 87/124 (71%), Gaps = 0/124 (0%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 ++QR+ERKLE V D FAR+FGG + PQE+E L+REA + ++ L +LA N Y + Sbjct 3 ILQRIERKLEGAVDDGFARVFGGQVAPQEIENGLQREAEESLRDLGDGTILAANSYSLLF 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 D +++ A+ EL F++ L ++I++ GWQTYG VVV F+QSS+LHTG FRARGTVN Sbjct 63 SPTDHDQIAAEYELNRKTFSKHLENFIKDNGWQTYGKVVVEFDQSSSLHTGIFRARGTVN 122 Query 127 PDVE 130 PD E Sbjct 123 PDAE 126 >gi|257054127|ref|YP_003131959.1| FHA domain-containing protein [Saccharomonospora viridis DSM 43017] gi|256583999|gb|ACU95132.1| FHA domain-containing protein [Saccharomonospora viridis DSM 43017] Length=406 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 126/268 (48%), Positives = 140/268 (53%), Gaps = 70/268 (26%) Query 288 GYGAPG-YDQGYRQSGGYGPSPGGGQPGYG-GYGEYGRGPARHEEGSYVPSGPPGPPEQR 345 GYG PG YDQGY Q GGY G GQPGY GYG+ P +++G G P Sbjct 180 GYGQPGGYDQGYGQPGGY--DQGYGQPGYDQGYGQ----PGGYDQGY-------GQPGYD 226 Query 346 PAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDY 405 Y GGYDQGY Q PGY GY +P G D Y Sbjct 227 QGYGQPGGYDQGYGQ-------------------------PGYDQ---GYGQPGGYDQGY 258 Query 406 GQSGAPDYGQPAP----GGY----------------------SGYGQGGYGSAGTSVTLQ 439 GQ G D G AP GGY G G G+ + LQ Sbjct 259 GQPGY-DQGYAAPPSPPGGYPAQTPPPPPGGGDPYAQQQGGYPGGGMPPAGNRQLTAILQ 317 Query 440 LDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 499 LDDGS RTY L++G N+IGRGQDA FRLPDTGVSRRHLEI WDGQ A LAD+ STNGTTV Sbjct 318 LDDGSNRTYSLKQGGNVIGRGQDADFRLPDTGVSRRHLEITWDGQSATLADIGSTNGTTV 377 Query 500 NNAPVQEWQLADGDVIRLGHSEIIVRMH 527 N PVQ WQLADGDVIR+GHS ++ R Sbjct 378 NGTPVQTWQLADGDVIRVGHSSLVFRTQ 405 Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 125/310 (41%), Positives = 153/310 (50%), Gaps = 52/310 (16%) Query 8 VQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLG 67 VQR +R+LE VG AFARIFGG++V QEV L RE D ++ L G R LAPN YI++LG Sbjct 4 VQRFDRRLENLVGSAFARIFGGNVVTQEVALELERECEDNVRDLAGGRKLAPNHYIVSLG 63 Query 68 VHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNP 127 D++++ AD + A +++++ E GW TYGDVVV E+ LHTG+F+ R TV+P Sbjct 64 AEDYDRMAADGPRVTRMLAEAVSEHLAEHGWDTYGDVVVSLERDEALHTGKFKTRSTVDP 123 Query 128 DVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQEDPR 187 DV+ AR S G P P GG GQ YD Q+ Sbjct 124 DVKASDAGT-FARSASKSDAGDRPMSQP--------GGYGQ------YDQGDPYGQQGQY 168 Query 188 GGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGYP-E 246 G Q G D GY +P DQ GY GGY + G P Sbjct 169 GYGQGQPGYD---------------QGYGQPGGYDQ-------GYGQPGGYDQGYGQPGY 206 Query 247 QRGYPDQRGYQDQGRGYPDQGQG-GYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYG 305 +GY GY DQG G P QG G P Y+Q GYG PGYDQGY Q GGY Sbjct 207 DQGYGQPGGY-DQGYGQPGYDQGYGQPGGYDQ----------GYGQPGYDQGYGQPGGY- 254 Query 306 PSPGGGQPGY 315 G GQPGY Sbjct 255 -DQGYGQPGY 263 >gi|343928767|ref|ZP_08768212.1| hypothetical protein GOALK_120_01940 [Gordonia alkanivorans NBRC 16433] gi|343761516|dbj|GAA15138.1| hypothetical protein GOALK_120_01940 [Gordonia alkanivorans NBRC 16433] Length=128 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 81/125 (65%), Positives = 92/125 (74%), Gaps = 11/125 (8%) Query 413 YGQPAPGGYS---GYGQG-GYGS-------AGTSVTLQLDDGSGRTYQLREGSNIIGRGQ 461 YGQ P Y GY QG YG+ A S+TL L+DGS RT+QL EGSN+IGRGQ Sbjct 3 YGQQPPAAYDYQGGYDQGQAYGAGRPAAGYAPASITLLLEDGSNRTFQLHEGSNVIGRGQ 62 Query 462 DAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSE 521 DAQFRLPDTGVSRRH+EIRWDG A+L DLNSTNGTTVN+ V W+LADGD IR+GHS+ Sbjct 63 DAQFRLPDTGVSRRHVEIRWDGTTAMLTDLNSTNGTTVNDLQVNTWELADGDRIRVGHSD 122 Query 522 IIVRM 526 I VR Sbjct 123 ITVRF 127 >gi|333917716|ref|YP_004491297.1| FHA domain-containing protein [Amycolicicoccus subflavus DQS3-9A1] gi|333479937|gb|AEF38497.1| FHA domain-containing protein [Amycolicicoccus subflavus DQS3-9A1] Length=345 Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 71/123 (58%), Positives = 89/123 (73%), Gaps = 0/123 (0%) Query 7 LVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITL 66 ++ R ERKLE VGDAFAR+F ++VPQE+E+ L+R AADG+Q L G LLAPN Y++T+ Sbjct 3 MLDRFERKLEGAVGDAFARLFRSAVVPQEIESALQRSAADGVQELDGGYLLAPNNYVVTI 62 Query 67 GVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVN 126 G D E+L D EL FAR LA++I EQGWQTY V V F+ S LHTGQFRA G ++ Sbjct 63 GASDHERLTNDRELTERVFARHLAEFITEQGWQTYAAVRVHFDMSDELHTGQFRASGIID 122 Query 127 PDV 129 PDV Sbjct 123 PDV 125 Lambda K H 0.312 0.140 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1159267309268 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40