BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0026

Length=448
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607168|ref|NP_214540.1|  hypothetical protein Rv0026 [Mycoba...   887    0.0  
gi|253796941|ref|YP_003029942.1|  hypothetical protein TBMG_00026...   884    0.0  
gi|254366485|ref|ZP_04982529.1|  conserved hypothetical protein [...   884    0.0  
gi|289764141|ref|ZP_06523519.1|  conserved hypothetical protein [...   883    0.0  
gi|15839400|ref|NP_334437.1|  hypothetical protein MT0029 [Mycoba...   882    0.0  
gi|339630109|ref|YP_004721751.1|  hypothetical protein MAF_00260 ...   827    0.0  
gi|289445551|ref|ZP_06435295.1|  conserved hypothetical protein [...   825    0.0  
gi|289441393|ref|ZP_06431137.1|  conserved hypothetical protein [...   824    0.0  
gi|31791203|ref|NP_853696.1|  hypothetical protein Mb0027 [Mycoba...   822    0.0  
gi|340625059|ref|YP_004743511.1|  hypothetical protein MCAN_00251...   764    0.0  
gi|254819082|ref|ZP_05224083.1|  hypothetical protein MintA_04103...   367    2e-99
gi|342860246|ref|ZP_08716898.1|  hypothetical protein MCOL_15255 ...   358    8e-97
gi|254773089|ref|ZP_05214605.1|  hypothetical protein MaviaA2_001...   353    4e-95
gi|118462713|ref|YP_879344.1|  hypothetical protein MAV_0044 [Myc...   352    8e-95
gi|41406136|ref|NP_958972.1|  hypothetical protein MAP0038 [Mycob...   344    2e-92
gi|183980080|ref|YP_001848371.1|  hypothetical protein MMAR_0045 ...   290    4e-76
gi|240172400|ref|ZP_04751059.1|  hypothetical protein MkanA1_2399...   288    1e-75
gi|296167099|ref|ZP_06849509.1|  conserved hypothetical protein [...   268    2e-69
gi|118615958|ref|YP_904290.1|  hypothetical protein MUL_0044 [Myc...   261    2e-67
gi|333988681|ref|YP_004521295.1|  hypothetical protein JDM601_004...   152    8e-35
gi|169245942|gb|ACA50963.1|  conserved hypothetical protein [Myco...  99.4    1e-18
gi|209418107|ref|YP_002274136.1|  hypothetical protein MULP_101 [...  99.4    1e-18
gi|49146165|ref|YP_025603.1|  hypothetical protein MUP081c [Mycob...  98.6    2e-18
gi|296164005|ref|ZP_06846629.1|  conserved hypothetical protein [...  81.3    3e-13
gi|296165466|ref|ZP_06848001.1|  conserved hypothetical protein [...  69.7    1e-09
gi|119855149|ref|YP_935754.1|  hypothetical protein Mkms_5764 [My...  68.6    2e-09
gi|333988699|ref|YP_004521313.1|  hypothetical protein JDM601_005...  57.0    7e-06
gi|118615957|ref|YP_904289.1|  hypothetical protein MUL_0043 [Myc...  56.6    9e-06
gi|333992654|ref|YP_004525268.1|  hypothetical protein JDM601_401...  55.8    2e-05
gi|183980079|ref|YP_001848370.1|  hypothetical protein MMAR_0044 ...  55.1    3e-05
gi|342860247|ref|ZP_08716899.1|  hypothetical protein MCOL_15260 ...  54.3    4e-05
gi|240172399|ref|ZP_04751058.1|  hypothetical protein MkanA1_2399...  54.3    4e-05
gi|289568686|ref|ZP_06448913.1|  conserved hypothetical protein [...  52.4    2e-04
gi|31791925|ref|NP_854418.1|  hypothetical protein Mb0760 [Mycoba...  52.4    2e-04
gi|289756827|ref|ZP_06516205.1|  conserved hypothetical protein [...  52.0    2e-04
gi|333989221|ref|YP_004521835.1|  hypothetical protein JDM601_058...  49.7    0.001
gi|15607167|ref|NP_214539.1|  hypothetical protein Rv0025 [Mycoba...  49.7    0.001
gi|148821944|ref|YP_001286698.1|  hypothetical protein TBFG_10753...  49.7    0.001
gi|15607879|ref|NP_215253.1|  hypothetical protein Rv0739 [Mycoba...  49.7    0.001
gi|296167100|ref|ZP_06849510.1|  conserved hypothetical protein [...  49.3    0.002
gi|340625058|ref|YP_004743510.1|  hypothetical protein MCAN_00241...  48.9    0.002
gi|254819083|ref|ZP_05224084.1|  hypothetical protein MintA_04108...  48.9    0.002
gi|289764140|ref|ZP_06523518.1|  conserved hypothetical protein [...  48.1    0.003
gi|289442140|ref|ZP_06431884.1|  conserved hypothetical protein [...  47.8    0.004
gi|254773088|ref|ZP_05214604.1|  hypothetical protein MaviaA2_001...  47.0    0.006
gi|336459448|gb|EGO38390.1|  Biofilm regulator BssS [Mycobacteriu...  46.6    0.009
gi|289748489|ref|ZP_06507867.1|  conserved hypothetical protein [...  46.2    0.010
gi|118465006|ref|YP_879343.1|  hypothetical protein MAV_0043 [Myc...  46.2    0.010
gi|31791202|ref|NP_853695.1|  hypothetical protein Mb0026 [Mycoba...  45.1    0.022
gi|333990938|ref|YP_004523552.1|  hypothetical protein JDM601_229...  44.7    0.032


>gi|15607168|ref|NP_214540.1| hypothetical protein Rv0026 [Mycobacterium tuberculosis H37Rv]
 gi|148659786|ref|YP_001281309.1| hypothetical protein MRA_0029 [Mycobacterium tuberculosis H37Ra]
 gi|148821217|ref|YP_001285971.1| hypothetical protein TBFG_10026 [Mycobacterium tuberculosis F11]
 21 more sequence titles
 gi|167968158|ref|ZP_02550435.1| hypothetical protein MtubH3_09027 [Mycobacterium tuberculosis 
H37Ra]
 gi|254548958|ref|ZP_05139405.1| hypothetical protein Mtube_00575 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289747796|ref|ZP_06507174.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289760123|ref|ZP_06519501.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995639|ref|ZP_06801330.1| hypothetical protein Mtub2_14317 [Mycobacterium tuberculosis 
210]
 gi|298527424|ref|ZP_07014833.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306795624|ref|ZP_07433926.1| hypothetical protein TMFG_02189 [Mycobacterium tuberculosis SUMu006]
 gi|307082486|ref|ZP_07491599.1| hypothetical protein TMLG_00758 [Mycobacterium tuberculosis SUMu012]
 gi|14195543|sp|P71596.2|YO26_MYCTU RecName: Full=Uncharacterized protein Rv0026/MT0029
 gi|1552581|emb|CAB02411.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148503938|gb|ABQ71747.1| hypothetical protein MRA_0029 [Mycobacterium tuberculosis H37Ra]
 gi|148719744|gb|ABR04369.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|289688324|gb|EFD55812.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289715687|gb|EFD79699.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497218|gb|EFI32512.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308343916|gb|EFP32767.1| hypothetical protein TMFG_02189 [Mycobacterium tuberculosis SUMu006]
 gi|308367776|gb|EFP56627.1| hypothetical protein TMLG_00758 [Mycobacterium tuberculosis SUMu012]
 gi|326905787|gb|EGE52720.1| hypothetical protein TBPG_03752 [Mycobacterium tuberculosis W-148]
 gi|339293104|gb|AEJ45215.1| hypothetical protein CCDC5079_0025 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339296753|gb|AEJ48863.1| hypothetical protein CCDC5180_0026 [Mycobacterium tuberculosis 
CCDC5180]
 gi|344217844|gb|AEM98474.1| hypothetical protein MTCTRI2_0029 [Mycobacterium tuberculosis 
CTRI-2]
Length=448

 Score =  887 bits (2291),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 447/448 (99%), Positives = 448/448 (100%), Gaps = 0/448 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420

Query  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448
            ATPLPLALAKLFWTARFNTSQPCEGQTF
Sbjct  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448


>gi|253796941|ref|YP_003029942.1| hypothetical protein TBMG_00026 [Mycobacterium tuberculosis KZN 
1435]
 gi|289552276|ref|ZP_06441486.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|297632497|ref|ZP_06950277.1| hypothetical protein MtubK4_00145 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297729468|ref|ZP_06958586.1| hypothetical protein MtubKR_00155 [Mycobacterium tuberculosis 
KZN R506]
 gi|313656797|ref|ZP_07813677.1| hypothetical protein MtubKV_00155 [Mycobacterium tuberculosis 
KZN V2475]
 gi|253318444|gb|ACT23047.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289436908|gb|EFD19401.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|328456732|gb|AEB02155.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=448

 Score =  884 bits (2285),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 446/448 (99%), Positives = 447/448 (99%), Gaps = 0/448 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASS PSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSAPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420

Query  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448
            ATPLPLALAKLFWTARFNTSQPCEGQTF
Sbjct  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448


>gi|254366485|ref|ZP_04982529.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134151997|gb|EBA44042.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
Length=448

 Score =  884 bits (2284),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 446/448 (99%), Positives = 447/448 (99%), Gaps = 0/448 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVD ARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDSARISAGDVGVFT  420

Query  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448
            ATPLPLALAKLFWTARFNTSQPCEGQTF
Sbjct  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448


>gi|289764141|ref|ZP_06523519.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289711647|gb|EFD75663.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=448

 Score =  883 bits (2281),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 446/448 (99%), Positives = 447/448 (99%), Gaps = 0/448 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVD ARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDLARISAGDVGVFT  420

Query  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448
            ATPLPLALAKLFWTARFNTSQPCEGQTF
Sbjct  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448


>gi|15839400|ref|NP_334437.1| hypothetical protein MT0029 [Mycobacterium tuberculosis CDC1551]
 gi|254233430|ref|ZP_04926756.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|13879071|gb|AAK44251.1| hypothetical protein MT0029 [Mycobacterium tuberculosis CDC1551]
 gi|124603223|gb|EAY61498.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|323717365|gb|EGB26570.1| hypothetical protein TMMG_00445 [Mycobacterium tuberculosis CDC1551A]
Length=448

 Score =  882 bits (2279),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 445/448 (99%), Positives = 447/448 (99%), Gaps = 0/448 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEH+NEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHANEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVD ARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDSARISAGDVGVFT  420

Query  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448
            ATPLPLALAKLFWTARFNTSQPCEGQTF
Sbjct  421  ATPLPLALAKLFWTARFNTSQPCEGQTF  448


>gi|339630109|ref|YP_004721751.1| hypothetical protein MAF_00260 [Mycobacterium africanum GM041182]
 gi|339329465|emb|CCC25100.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=450

 Score =  827 bits (2135),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 424/449 (95%), Positives = 428/449 (96%), Gaps = 1/449 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420

Query  421  -ATPLPLALAKLFWTARFNTSQPCEGQTF  448
                L L  +K     +        G+ F
Sbjct  421  DRHALALGPSKALLDGQIQHISAVRGRNF  449


>gi|289445551|ref|ZP_06435295.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289572602|ref|ZP_06452829.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289418509|gb|EFD15710.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289537033|gb|EFD41611.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=477

 Score =  825 bits (2131),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 424/449 (95%), Positives = 428/449 (96%), Gaps = 1/449 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420

Query  421  -ATPLPLALAKLFWTARFNTSQPCEGQTF  448
                L L  +K     +        G+ F
Sbjct  421  DRHALALGPSKALLDGQIQHISAVRGRNF  449


>gi|289441393|ref|ZP_06431137.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289567911|ref|ZP_06448138.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289748490|ref|ZP_06507868.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289756085|ref|ZP_06515463.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289414312|gb|EFD11552.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289541664|gb|EFD45313.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289689077|gb|EFD56506.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289696672|gb|EFD64101.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=477

 Score =  824 bits (2129),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 419/420 (99%), Positives = 420/420 (100%), Gaps = 0/420 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420


>gi|31791203|ref|NP_853696.1| hypothetical protein Mb0027 [Mycobacterium bovis AF2122/97]
 gi|121635936|ref|YP_976159.1| hypothetical protein BCG_0057 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988409|ref|YP_002643076.1| hypothetical protein JTY_0027 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31616788|emb|CAD92889.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121491583|emb|CAL70041.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224771522|dbj|BAH24328.1| hypothetical protein JTY_0027 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341599952|emb|CCC62620.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=477

 Score =  822 bits (2122),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/449 (95%), Positives = 427/449 (96%), Gaps = 1/449 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPAPPDREQGDAARAIADAEAALAH NSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHPNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420

Query  421  -ATPLPLALAKLFWTARFNTSQPCEGQTF  448
                L L  +K     +        G+ F
Sbjct  421  DRHALALGPSKALLDGQIQHISAVRGRNF  449


>gi|340625059|ref|YP_004743511.1| hypothetical protein MCAN_00251 [Mycobacterium canettii CIPT 
140010059]
 gi|340003249|emb|CCC42366.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=450

 Score =  764 bits (1973),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/420 (98%), Positives = 413/420 (99%), Gaps = 0/420 (0%)

Query  1    VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60
            +AFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR
Sbjct  1    MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIR  60

Query  61   QRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120
            QRHSNLYYPA PDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE
Sbjct  61   QRHSNLYYPALPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGE  120

Query  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAW  180
            SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKL+DIREVVATASLDAASKSALMAAW
Sbjct  121  SLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLRDIREVVATASLDAASKSALMAAW  180

Query  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLA  240
            TSLYDASKGDRGDADDRGPASVGSGGAPARGAG QPELPT AEPDCLLDSLLLEDPGLLA
Sbjct  181  TSLYDASKGDRGDADDRGPASVGSGGAPARGAGHQPELPTGAEPDCLLDSLLLEDPGLLA  240

Query  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGD  300
            DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATP LVPGVSAPGGLPLSGLLRGVGD
Sbjct  241  DDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPGLVPGVSAPGGLPLSGLLRGVGD  300

Query  301  EPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360
            EPELT FDERGQEVRDPADYE SNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN
Sbjct  301  EPELTGFDERGQEVRDPADYERSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPN  360

Query  361  GETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            GETVTAASPQLAAAIKAAA GTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT
Sbjct  361  GETVTAASPQLAAAIKAAAGGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420


>gi|254819082|ref|ZP_05224083.1| hypothetical protein MintA_04103 [Mycobacterium intracellulare 
ATCC 13950]
Length=485

 Score =  367 bits (942),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 242/439 (56%), Positives = 293/439 (67%), Gaps = 41/439 (9%)

Query  7    MSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIRQRHSNL  66
            MS ++DLLAT++ VRDRTGDPNAWQTGL PTEV+AV+T TTR++QL+AI  KIR++H+++
Sbjct  1    MSAYDDLLATVKSVRDRTGDPNAWQTGLAPTEVSAVITPTTRTDQLEAIAAKIRRQHADV  60

Query  67   Y--YPA--------------PPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILN  110
            +   PA              PP+RE G AA AIA AEAALA QNSA++QLD+QVVSAILN
Sbjct  61   FGAVPASGPPTGRSLAGTATPPNRESGAAADAIASAEAALAQQNSASSQLDMQVVSAILN  120

Query  111  AHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDA  170
            AHL  V+G E+L +LQ E EAAV +RSDLDTPAGARDFQRFLIGKL+DIR VV  ASLD 
Sbjct  121  AHLSAVDGREALTKLQHETEAAVLMRSDLDTPAGARDFQRFLIGKLRDIRAVVLNASLDD  180

Query  171  ASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDS  230
             SKSALMAAWTSLYDASK +     +  PA+   G AP   A  +    T AE D LLDS
Sbjct  181  TSKSALMAAWTSLYDASKNEPNRPGEHAPAA-SVGDAPDLSAAAESS-DTDAEWDPLLDS  238

Query  231  LLLEDPGLLADDLQVPGGTSAAIPSASS----TPSLPNLGGATMPGGGATPALVPGVSAP  286
            L  +D GL  +D   P   + A    ++     P +PN GG  +PG G  PA   G  AP
Sbjct  239  LFADDDGLWPEDAPAPDPAAGAPIPTATETPMAPPMPNFGGGPLPGLGTMPASTAGWEAP  298

Query  287  GGLPLSGLLRGVGDEPELTDFDERGQEV-----RDPADYEHSNEPDERRADDREGADEDA  341
            GGLP SG   G  D+P L D    G+E+      DP+ ++ S+ PDE         D D 
Sbjct  299  GGLPFSG---GDADDPALQDL--AGEELPDAQEEDPSAHDASDNPDE---------DNDP  344

Query  342  GLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTA  401
                S+ P   PT VTLP+GETVTAASPQLAAAI+AA  GTPIA+AFQQQG+ IP PGTA
Sbjct  345  QDVSSDEPAAGPTPVTLPDGETVTAASPQLAAAIQAAVGGTPIAEAFQQQGMTIPPPGTA  404

Query  402  VANPVDPARISAGDVGVFT  420
            VANP+D  R+  GD+G+FT
Sbjct  405  VANPIDALRVGPGDIGMFT  423


>gi|342860246|ref|ZP_08716898.1| hypothetical protein MCOL_15255 [Mycobacterium colombiense CECT 
3035]
 gi|342132624|gb|EGT85853.1| hypothetical protein MCOL_15255 [Mycobacterium colombiense CECT 
3035]
Length=483

 Score =  358 bits (920),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 235/435 (55%), Positives = 286/435 (66%), Gaps = 35/435 (8%)

Query  7    MSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIRQRHSNL  66
            MS ++DLLA ++YVRDRTGDPNAWQTGL P EVTAV+T TTR EQ++AILRKIRQ+H+ +
Sbjct  1    MSAYDDLLAAVKYVRDRTGDPNAWQTGLAPGEVTAVITPTTRPEQVEAILRKIRQQHAGI  60

Query  67   Y----------------YPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILN  110
            +                 PAPPDRE G AA AIA+AEAAL+ QNSA++QLD+QV+SAILN
Sbjct  61   FGAATAANPPVPRPSADTPAPPDRETGAAADAIANAEAALSQQNSASSQLDMQVISAILN  120

Query  111  AHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDA  170
            AHL+ V+G E+L +LQ E EAAVRIRSDLDTPAGARDFQRFLIGKL+DIREVV  ASLD 
Sbjct  121  AHLRAVDGREALTKLQHETEAAVRIRSDLDTPAGARDFQRFLIGKLRDIREVVLNASLDD  180

Query  171  ASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDS  230
             SKSALMAAWTSLYDASKG+     ++   SV  G   A GA    +       D LL  
Sbjct  181  TSKSALMAAWTSLYDASKGEPAAPPEQPRGSVPVGDTSAAGATDDLDAEWDPLLDSLLGD  240

Query  231  LLLEDPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLP  290
                   +   D  V G    A+P +  TP++PN GG ++PG G+ P++  G   PGG P
Sbjct  241  DDGLSGDVAGPDPAV-GAAMPAVPQSPMTPAMPNFGGGSLPGLGSMPSMA-GWEGPGGFP  298

Query  291  LSGLLRGVGDEPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLG-----K  345
            LSG     G  P L D           AD E  N  DE R  +   A ++AG G      
Sbjct  299  LSGAQGRDGAGPALDDL----------ADEEPPN--DEGREPEALDASDEAGDGTERDTS  346

Query  346  SESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANP  405
            ++ P   PT VTLP+GETVTAASPQLAAAI AA  GTPIA+AFQ QG+ IP PGTAV +P
Sbjct  347  ADEPAAGPTPVTLPDGETVTAASPQLAAAITAAVGGTPIAEAFQHQGMTIPPPGTAVPSP  406

Query  406  VDPARISAGDVGVFT  420
            +DP +++ GD+G+ T
Sbjct  407  IDPLQVAPGDIGMLT  421


>gi|254773089|ref|ZP_05214605.1| hypothetical protein MaviaA2_00186 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=483

 Score =  353 bits (906),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 242/447 (55%), Positives = 286/447 (64%), Gaps = 59/447 (13%)

Query  7    MSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIRQRHSNL  66
            MS ++DLLA ++ VRDRTGDPNAWQTGL P EV+AV+T +TR EQL AIL KIR++H+ L
Sbjct  1    MSAYDDLLAAVKDVRDRTGDPNAWQTGLAPAEVSAVITPSTRPEQLQAILAKIRRQHAEL  60

Query  67   YYPAP-------------PDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHL  113
            +  AP             PDRE G AA AIA AEAALA QNS ++QLD+QVV+AILNAHL
Sbjct  61   FGAAPTGVARPPADAGPAPDRESGAAADAIASAEAALAQQNSVSSQLDMQVVTAILNAHL  120

Query  114  KTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASK  173
            K V+G E+L +LQQE EAAVR RSDLDTPAGARDFQRFLIGKL+DIR VV  ASLD  SK
Sbjct  121  KAVDGREALTKLQQETEAAVRTRSDLDTPAGARDFQRFLIGKLRDIRAVVLNASLDDTSK  180

Query  174  SALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLL  233
            SALMAAWTSLYDA+K DR           G   + A  A       T  +PD  LD    
Sbjct  181  SALMAAWTSLYDAAKNDR----------PGDHASSAGAAADAAAAGTSDQPDEDLDDEWD  230

Query  234  E--------------DPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPAL  279
                           DP    D L   G T    P  +  P+LP+ GG ++PG GATPA 
Sbjct  231  PLLDSLLADDDGSPIDPAAALDPLG--GNTIPPAPPPAMAPALPSFGGGSLPGLGATPAS  288

Query  280  VPGVSAPGGLPLSGLLRGVGDEPELTDF------DERGQEVRDPADYEHSNEPDERRADD  333
            + G   PGGLPLSGL  G   +P L D       +++GQ+   PAD        E+  D+
Sbjct  289  MSGWETPGGLPLSGLQAGDASDPALQDLADEDLPEDQGQQHDSPADGST-----EQADDE  343

Query  334  REGADEDAGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGI  393
               ADE         PP  PT+VTLP+GETVTAASPQLAAAIKAA +GTPIA+AFQQQG+
Sbjct  344  NASADE---------PPAGPTSVTLPDGETVTAASPQLAAAIKAAVAGTPIAEAFQQQGM  394

Query  394  AIPLPGTAVANPVDPARISAGDVGVFT  420
             +P PGTAVANPVD  R+S GD+G+FT
Sbjct  395  TLPAPGTAVANPVDVVRVSPGDIGMFT  421


>gi|118462713|ref|YP_879344.1| hypothetical protein MAV_0044 [Mycobacterium avium 104]
 gi|118164000|gb|ABK64897.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=483

 Score =  352 bits (903),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 241/447 (54%), Positives = 286/447 (64%), Gaps = 59/447 (13%)

Query  7    MSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIRQRHSNL  66
            MS ++DLLA ++ VRDRTGDPNAWQTGL P EV+AV+T +TR EQL AIL KIR++H+ +
Sbjct  1    MSAYDDLLAAVKDVRDRTGDPNAWQTGLAPAEVSAVITPSTRPEQLQAILAKIRRQHAEV  60

Query  67   YYPAP-------------PDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHL  113
            +  AP             PDRE G AA AIA AEAALA QNS ++QLD+QVV+AILNAHL
Sbjct  61   FGAAPTGVARPPADAGPAPDRESGAAADAIASAEAALAQQNSVSSQLDMQVVTAILNAHL  120

Query  114  KTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASK  173
            K V+G E+L +LQQE EAAVR RSDLDTPAGARDFQRFLIGKL+DIR VV  ASLD  SK
Sbjct  121  KAVDGREALTKLQQETEAAVRTRSDLDTPAGARDFQRFLIGKLRDIRAVVLNASLDDTSK  180

Query  174  SALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLL  233
            SALMAAWTSLYDA+K DR           G   + A  A       T  +PD  LD    
Sbjct  181  SALMAAWTSLYDAAKNDR----------PGDHASSAGAAADAAAAGTSDQPDEDLDDEWD  230

Query  234  E--------------DPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPAL  279
                           DP    D L   G T    P  +  P+LP+ GG ++PG GATPA 
Sbjct  231  PLLDSLLADDDGSPIDPAAALDPLG--GNTIPPAPPPAMAPALPSFGGGSLPGLGATPAS  288

Query  280  VPGVSAPGGLPLSGLLRGVGDEPELTDF------DERGQEVRDPADYEHSNEPDERRADD  333
            + G   PGGLPLSGL  G   +P L D       +++GQ+   PAD        E+  D+
Sbjct  289  MSGWETPGGLPLSGLQAGDASDPALQDLADEDLPEDQGQQHDSPADGSA-----EQADDE  343

Query  334  REGADEDAGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGI  393
               ADE         PP  PT+VTLP+GETVTAASPQLAAAIKAA +GTPIA+AFQQQG+
Sbjct  344  NASADE---------PPAGPTSVTLPDGETVTAASPQLAAAIKAAVAGTPIAEAFQQQGM  394

Query  394  AIPLPGTAVANPVDPARISAGDVGVFT  420
             +P PGTAVANPVD  R+S GD+G+FT
Sbjct  395  TLPAPGTAVANPVDVVRVSPGDIGMFT  421


>gi|41406136|ref|NP_958972.1| hypothetical protein MAP0038 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394484|gb|AAS02355.1| hypothetical protein MAP_0038 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336459447|gb|EGO38389.1| Biofilm regulator BssS [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=483

 Score =  344 bits (883),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 240/447 (54%), Positives = 284/447 (64%), Gaps = 59/447 (13%)

Query  7    MSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIRQRHSNL  66
            MS ++DLLA ++ VRDRTGDPNAWQTGL P EV+AV+T +TR EQL AIL KIR++H+ +
Sbjct  1    MSAYDDLLAAVKDVRDRTGDPNAWQTGLAPAEVSAVITPSTRPEQLQAILAKIRRQHAEV  60

Query  67   YYPAP-------------PDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHL  113
            +  AP             PDRE G AA AIA AEAALA QNS ++QLD+QVV+AILNAHL
Sbjct  61   FGAAPTGVARPPADAGPAPDRESGAAADAIASAEAALAQQNSVSSQLDMQVVTAILNAHL  120

Query  114  KTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASK  173
            K V+G E+L +LQQE EAAVR RSDLDTPAGARDFQRFLIGKL+DIR VV  ASLD  SK
Sbjct  121  KAVDGREALTKLQQETEAAVRTRSDLDTPAGARDFQRFLIGKLRDIRAVVLNASLDDTSK  180

Query  174  SALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLL  233
            SALMAAWTSLYDA+K DR           G   + A  A       T  +PD  LD    
Sbjct  181  SALMAAWTSLYDAAKSDR----------PGDHASSAGAAADAAAAGTSDQPDEDLDDEWD  230

Query  234  E--------------DPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPAL  279
                           DP    D L   G T    P  +  P+LP+ GG ++PG GATPA 
Sbjct  231  PLLDSLLADDDGSPIDPAAALDPLG--GNTIPPAPPPAMAPALPSFGGGSLPGLGATPAS  288

Query  280  VPGVSAPGGLPLSGLLRGVGDEPELTDF------DERGQEVRDPADYEHSNEPDERRADD  333
            + G   PGGLPLSGL  G   +P L D       +++GQ+   PAD        E+  D+
Sbjct  289  MSGWETPGGLPLSGLQAGDASDPALQDLGDEDLPEDQGQQHDSPADGSA-----EQADDE  343

Query  334  REGADEDAGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGI  393
               ADE         PP  PT+VTLP+GETV AASPQLAAAIKAA  GTPIA+AFQQQG+
Sbjct  344  NASADE---------PPAGPTSVTLPDGETVAAASPQLAAAIKAAVGGTPIAEAFQQQGM  394

Query  394  AIPLPGTAVANPVDPARISAGDVGVFT  420
             +P PGTAVANPVD  R+S GD+G+FT
Sbjct  395  TLPTPGTAVANPVDVVRVSPGDIGMFT  421


>gi|183980080|ref|YP_001848371.1| hypothetical protein MMAR_0045 [Mycobacterium marinum M]
 gi|183173406|gb|ACC38516.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=417

 Score =  290 bits (741),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 185/345 (54%), Positives = 227/345 (66%), Gaps = 27/345 (7%)

Query  87   EAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGAR  146
            E ALAHQNS ++QLDLQV++AILNAHL  V+G E+L ELQQE EAAVR RSDLDTPAGAR
Sbjct  25   EVALAHQNSMSSQLDLQVIAAILNAHLTAVDGSEALDELQQETEAAVRTRSDLDTPAGAR  84

Query  147  DFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDR---GDADDRGPASVG  203
            DFQRFLIGKL+DIREVVATASLD  SK+ LMAAWTSLY+ASK +    GD       + G
Sbjct  85   DFQRFLIGKLRDIREVVATASLDDTSKATLMAAWTSLYNASKQEASSPGDVPTATEPAAG  144

Query  204  SGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQVPGGTSAAIPSASSTPSLP  263
            +G    R AG      T  +P  LLDSLL +DPGL+A+     G   +   +A + PS+P
Sbjct  145  TGADAVRAAGL-----TSGDP--LLDSLLFDDPGLVAEAPLPQGAAPSGAATAPALPSMP  197

Query  264  NLG---GATMP-GGGATPALVPGVSAPGGLPLSGLLRGVGDEPELTDFDERGQEVRDPAD  319
            +LG   GA  P G G+ P L      P G  LS + R +    +  D         DP D
Sbjct  198  SLGDGSGAATPSGAGSVPNL------PAGPALSAIPRAIASRLDELDDPSLDSLALDPDD  251

Query  320  YEHSNEPDERRADDREGADED----AGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAI  375
             +  +EP +   +D +G  ED    A  G+ +  P  PTTVTLPNG+T+TAASP+LAAAI
Sbjct  252  SD--DEPADLD-EDTDGGGEDTEQPASSGEPQPLPTGPTTVTLPNGDTITAASPELAAAI  308

Query  376  KAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
             A A G  IADAFQQQGIAIP PGT V++P+DPAR++AGD+G+FT
Sbjct  309  NATAGGAAIADAFQQQGIAIPPPGTPVSDPIDPARLAAGDIGMFT  353


>gi|240172400|ref|ZP_04751059.1| hypothetical protein MkanA1_23998 [Mycobacterium kansasii ATCC 
12478]
Length=423

 Score =  288 bits (738),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 218/358 (61%), Positives = 252/358 (71%), Gaps = 23/358 (6%)

Query  70   APPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEI  129
            APPD  Q  AA AIA AEAALAHQNS ++QLDLQVVSAILNAHL  VEG ++L++LQQE 
Sbjct  16   APPDSGQATAADAIAGAEAALAHQNSVSSQLDLQVVSAILNAHLTAVEGRDALNQLQQET  75

Query  130  EAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKG  189
            EAAVR RSDLDTPAGARDFQRFLIGKL+DIREVVA ASLD  SK+ LMAAWTSLY+ASK 
Sbjct  76   EAAVRTRSDLDTPAGARDFQRFLIGKLRDIREVVANASLDDTSKATLMAAWTSLYNASKN  135

Query  190  DRGDADDRGPASVGSGGA-PARGAGQ-QPELPTRAEPDCLLDSLLLEDPGLLADDLQVPG  247
            + G        +VG G A PAR AG    +L      D LLDSLL +DP L   +  +PG
Sbjct  136  EAG--------AVGPGPATPARAAGDGGGQLADLLSDDPLLDSLLFDDPALPDGEAPMPG  187

Query  248  GTSAAIPSASSTPSLPNLGGATMPG---GGATPALVPGVSAPGGLPLSGLLRGVGDEPEL  304
            G+S A   A +TP +PNLGG  MPG   G  +P  +PG+   GG PLSGLLR  G EP L
Sbjct  188  GSSPAPQMAPTTPGIPNLGGVPMPGLPTGATSP--MPGLGW-GGSPLSGLLR--GSEPGL  242

Query  305  TDFDERGQEVRDPADYE---HSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPNG  361
             D DER  +  DP D+E   H+++P E R +DR   D      K +SPP  PT VTLPNG
Sbjct  243  ADRDERELDSGDP-DHERAGHADDPTENR-EDRGDTDAQPSPDKPDSPPTGPTAVTLPNG  300

Query  362  ETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVF  419
            ETVTAA+PQLAAAIKAAA G PI DAFQQQGIA+P PGT V +P+DPAR+  GD+G F
Sbjct  301  ETVTAANPQLAAAIKAAAGGVPIPDAFQQQGIALPPPGTPVTDPIDPARLEPGDIGFF  358


>gi|296167099|ref|ZP_06849509.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897541|gb|EFG77137.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=410

 Score =  268 bits (685),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 193/354 (55%), Positives = 222/354 (63%), Gaps = 21/354 (5%)

Query  70   APPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEI  129
            APPDRE G+AA AIA AEAALAHQNS ++QLD+QV++AILNAHL  VEG E+L +LQQ+ 
Sbjct  15   APPDRETGEAADAIARAEAALAHQNSVSSQLDMQVITAILNAHLNAVEGREALAKLQQDT  74

Query  130  EAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKG  189
            EAAVR RSDLDTPAGARDFQRFLIGKL+DIR VV  ASLD  SKSALMAAWTSLYDASKG
Sbjct  75   EAAVRTRSDLDTPAGARDFQRFLIGKLRDIRAVVLNASLDDTSKSALMAAWTSLYDASKG  134

Query  190  DRGDADDRGPA-SVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQVPGG  248
                 D+R  A +VG+    A  +G  P          LLDSLL EDP L  +D+   G 
Sbjct  135  QPDGPDERLSAQTVGADADTAADSGWDP----------LLDSLLAEDPSLAGEDMPGVGV  184

Query  249  TSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSA-PGGLPLSGLLRGVGDEPELTDF  307
            T  A   A S         +  PG       +P + A PGGLPL G+  G   +P L   
Sbjct  185  TDGAPAPAPSLAPAAQPPPSFAPG-------LPSLGAMPGGLPLPGVPGGDAMDPALQGL  237

Query  308  DERG-QEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPNGETVTA  366
            D+ G  +  D AD E     DE           DA   +  S    PTTVTLP+GETVTA
Sbjct  238  DDEGLLDSADQADPETDASSDEPGD-RDGDGGTDAATAEDPSASAGPTTVTLPDGETVTA  296

Query  367  ASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            ASPQLAAAIKAA  G  I DAFQQQGI IP PGTAV  P+DPA +   D+G+F 
Sbjct  297  ASPQLAAAIKAAVGGAAIPDAFQQQGITIPPPGTAVPEPIDPADVVPADIGMFV  350


>gi|118615958|ref|YP_904290.1| hypothetical protein MUL_0044 [Mycobacterium ulcerans Agy99]
 gi|118568068|gb|ABL02819.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=421

 Score =  261 bits (667),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 189/356 (54%), Positives = 231/356 (65%), Gaps = 47/356 (13%)

Query  87   EAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGAR  146
            + ALAHQNS ++QLDLQV++AILNAHL  V+G E+L ELQQE EAAVR RSDLDT AGAR
Sbjct  25   KVALAHQNSMSSQLDLQVIAAILNAHLTAVDGSEALDELQQETEAAVRTRSDLDTLAGAR  84

Query  147  DFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDR---GDADDRGPASVG  203
            DFQRFLIGKL+DIREVVATASLD  SK+ LMAAWTSLY+ASK +    GDA      + G
Sbjct  85   DFQRFLIGKLRDIREVVATASLDDTSKATLMAAWTSLYNASKQEASSPGDAQTATEPAAG  144

Query  204  SGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQVPGGTS-AAIPSASSTPSL  262
            +G    R AG           D LLDSLL +DPGL+ D+  +P G + +   +A S PS+
Sbjct  145  TGPDADRAAG-------LISGDPLLDSLLFDDPGLV-DEATLPQGAAPSGAATAPSLPSM  196

Query  263  PNLG---GATMP-GGGATPALVPGVSAPGGLPLSGLLRGVG------DEPEL----TDFD  308
            P+LG   GA  P G G+ P L      P G  LS + R +       D+P L     D D
Sbjct  197  PSLGDGSGAATPSGAGSVPNL------PAGPALSAIPRAIASRLDELDDPSLDSLALDPD  250

Query  309  ERGQEVRD-PADYEHSNEPDERRADDREGADED----AGLGKSESPPQAPTTVTLPNGET  363
              G +  D PAD +          +D +G  ED    A  G+ +  P  PTTVTLPNG+T
Sbjct  251  ASGDDSDDEPADLD----------EDTDGGGEDTEQPASSGEPQPLPTGPTTVTLPNGDT  300

Query  364  VTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVF  419
            +TAASP+LAAAI AAA G  IADAFQQQGIAIP PGT V++P+DPAR++AGD+G+F
Sbjct  301  ITAASPELAAAINAAAGGAAIADAFQQQGIAIPPPGTPVSDPIDPARLAAGDIGMF  356


>gi|333988681|ref|YP_004521295.1| hypothetical protein JDM601_0041 [Mycobacterium sp. JDM601]
 gi|333484649|gb|AEF34041.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=435

 Score =  152 bits (385),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 163/402 (41%), Positives = 206/402 (52%), Gaps = 57/402 (14%)

Query  47   TRSEQLDAILR---------KIRQRHSNLYYPAPPD-------------REQGDAARAIA  84
            TR E LDAI R           R   + L  P PPD              +QG A RA+ 
Sbjct  3    TRDEVLDAIHRIENTGGAGEATRAAQAALTLPLPPDGYDRVLHRLAPADTQQGSAVRAMR  62

Query  85   DAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAG  144
             AE+ALA Q SATA+ D Q+++A+ +AH  T+EG   L  +Q EI  A +   DL T AG
Sbjct  63   TAESALAQQLSATAEFDRQIIAALRHAHKTTLEGRRRLDNVQTEIVGATQ-HWDLSTAAG  121

Query  145  ARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDRGDADDRGPASVGS  204
            AR+FQRFLI KL +I  VV  A+ D  SK  L AA T+LY A    R D     PA V  
Sbjct  122  AREFQRFLIVKLGEIIGVVEEANDDDTSKQELTAALTALYAAPAAQRDD-----PAPVEQ  176

Query  205  GGAPARGAGQQPELPTRAE------PDCLLDSLLLEDPGLLADDLQVPGGTSAAIPSASS  258
              AP  G    P  P+ AE       D  LD+L  E+P    DD ++    SA  PSA+ 
Sbjct  177  NPAPDGGPSPTPVAPSLAEAAPSVAEDGYLDALPDEEP---EDDYRI----SAQRPSAA-  228

Query  259  TPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGDEPELTDFDERGQEVRDPA  318
             P +P   G      G     +P V+   G+P +G L G G   E  D DE   +   PA
Sbjct  229  -PPMPAFPGFGG--EGPGFGAMPPVA---GMPPAGSLSGPGYGTEPVD-DEGLPDAVAPA  281

Query  319  DYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAA  378
            D        +  A      D+D     +E PP  P TVTLP+G T T   PQLAAA++AA
Sbjct  282  D--------DDTAPAGGDRDDDRDDAAAEPPPDGPVTVTLPDGATTTVVDPQLAAAMQAA  333

Query  379  ASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
            A GTP+A+AF++QGI IP  GT V +PVD A++  GD+GVFT
Sbjct  334  ADGTPVAEAFRRQGIDIPPAGTPVMSPVDQAQLRPGDIGVFT  375


>gi|169245942|gb|ACA50963.1| conserved hypothetical protein [Mycobacterium marinum DL240490]
Length=511

 Score = 99.4 bits (246),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 123/367 (34%), Positives = 167/367 (46%), Gaps = 40/367 (10%)

Query  76   QGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAV-R  134
            +G AA A    + ALA  +SA    D Q+  A+L A   + EG + L  LQQEI   + +
Sbjct  106  RGAAAEAAKRLDEALARNHSAINDADDQLADAVLKASSSSAEGRQRLQRLQQEIIDEIDK  165

Query  135  IRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDRGDA  194
            + S LDTPAG +    FL GK  DI  V+  A LD+ S++ ++   ++ Y A   D G  
Sbjct  166  LGSSLDTPAGQQQLAEFLQGKTGDILNVLKNAGLDSDSQARVLDGLSARYRALHHDAGS-  224

Query  195  DDRGPASVG--------SGGAP-ARGAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQV  245
             D  PAS G        SG AP + G G +  LP     D LLD       GL +D L  
Sbjct  225  -DETPASDGQPQDAATSSGDAPPSTGDGGEDGLPAA---DPLLD-------GLASDPLLS  273

Query  246  PGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGDEPELT  305
              GT A  P+  +  SLP   G+ +P  G       G+   G    S L  G    P   
Sbjct  274  GLGTMAG-PAMGALGSLPGALGSAIPSLGGGGLGGAGLGDLGSALGSALHDGAA--PSEL  330

Query  306  DFDERGQEVRDPADYEHSNEPDERRADDREGAD-EDAG-----LGKSE------SPPQAP  353
            D DE    V    +   SN  D++  D  + A   D G     LG S+       P +A 
Sbjct  331  DSDEH---VEPLTETPQSNPEDDQSPDPTQPAGLADHGRDHPQLGDSDDAAAPAQPLEAS  387

Query  354  TTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISA  413
            T V LP+    TA S  LA A +A  +G  I DA+    + +P PG  ++ P+ P R+  
Sbjct  388  TQVELPDQSVRTAGSSALATAGRAVLAGENIDDAYAAAQVQLPPPGAPISAPISPGRLQF  447

Query  414  GDVGVFT  420
            GDVG +T
Sbjct  448  GDVGQYT  454


>gi|209418107|ref|YP_002274136.1| hypothetical protein MULP_101 [Mycobacterium liflandii 128FXT]
 gi|169409239|gb|ACA57645.1| conserved hypothetical protein [Mycobacterium liflandii 128FXT]
Length=511

 Score = 99.4 bits (246),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 123/367 (34%), Positives = 167/367 (46%), Gaps = 40/367 (10%)

Query  76   QGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAV-R  134
            +G AA A    + ALA  +SA    D Q+  A+L A   + EG + L  LQQEI   + +
Sbjct  106  RGAAAEAAKRLDEALARNHSAINDADDQLADAVLKASSSSAEGRQRLQRLQQEIIDEIDK  165

Query  135  IRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDRGDA  194
            + S LDTPAG +    FL GK  DI  V+  A LD+ S++ ++   ++ Y A   D G  
Sbjct  166  LGSSLDTPAGQQQLAEFLQGKTGDILNVLKNAGLDSDSQARVLDGLSARYRALHHDAGS-  224

Query  195  DDRGPASVG--------SGGAP-ARGAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQV  245
             D  PAS G        SG AP + G G +  LP     D LLD       GL +D L  
Sbjct  225  -DETPASDGQPQDAATSSGDAPPSAGDGGEDGLPAA---DPLLD-------GLASDPLLS  273

Query  246  PGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGDEPELT  305
              GT A  P+  +  SLP   G+ +P  G       G+   G    S L  G    P   
Sbjct  274  GLGTMAG-PAMGALGSLPGALGSAIPSLGGGGLGGAGLGDLGSALGSALHDGAA--PSEL  330

Query  306  DFDERGQEVRDPADYEHSNEPDERRADDREGAD-EDAG-----LGKSE------SPPQAP  353
            D DE    V    +   SN  D++  D  + A   D G     LG S+       P +A 
Sbjct  331  DSDEH---VEPLTETPQSNPEDDQSPDPTQPAGLADHGRDHPQLGDSDDAAAPAQPLEAS  387

Query  354  TTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISA  413
            T V LP+    TA S  LA A +A  +G  I DA+    + +P PG  ++ P+ P R+  
Sbjct  388  TQVELPDQSVRTAGSSALATAGRAVLAGENIDDAYAAAQVQLPPPGAPISAPISPGRLQF  447

Query  414  GDVGVFT  420
            GDVG +T
Sbjct  448  GDVGQYT  454


>gi|49146165|ref|YP_025603.1| hypothetical protein MUP081c [Mycobacterium ulcerans Agy99]
 gi|42414799|emb|CAE46892.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=514

 Score = 98.6 bits (244),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 116/364 (32%), Positives = 164/364 (46%), Gaps = 34/364 (9%)

Query  76   QGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAV-R  134
            +G AA A    + ALA  +SA    D Q+  A+L A   + EG + L  LQQEI   + +
Sbjct  106  RGAAAEAAKRLDEALARNHSAINDADDQLADAVLKASSSSAEGHQRLQRLQQEIIDEIDK  165

Query  135  IRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDRGDA  194
            + S LDTPAG +    FL GK  DI  V+  A LD+ S++ ++   ++ Y     D G  
Sbjct  166  LGSSLDTPAGQQQLAEFLQGKTGDILNVLKNAGLDSDSQARVLDGLSARYRGLHHDAGS-  224

Query  195  DDRGPASVG--------SGGAP-ARGAGQQPELPTRAEPDCLLDSL----LLEDPGLLAD  241
             D  PAS G        SG AP + G G +  LP     D LLD L    LL   G++A 
Sbjct  225  -DETPASDGQPQDATTSSGDAPPSTGDGGEDGLPAA---DPLLDGLASDPLLSGLGIMAG  280

Query  242  DLQ-----VPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLR  296
                    +PG   +AIPS           G      G+  AL  G +AP  L     + 
Sbjct  281  PAMGALGSLPGALGSAIPSLGGGGLGGAGLGDLGSALGS--ALHDG-AAPSELDSDEHVE  337

Query  297  GVGDEPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTV  356
             + + P+    D++  +   PA        D  R   + G  +DA       P +A T V
Sbjct  338  PLTETPQSNPEDDQSPDPTQPAGLA-----DHGRDHPQLGDSDDAA--APAQPLEASTQV  390

Query  357  TLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDV  416
             LP+    TA S  LA A +A  +G  I DA+    + +P PG  ++ P+ P R+  GDV
Sbjct  391  ELPDQSVRTAGSSALATAGRAVLAGENIDDAYAAAQVQLPPPGAPISAPISPGRLQFGDV  450

Query  417  GVFT  420
            G +T
Sbjct  451  GQYT  454


>gi|296164005|ref|ZP_06846629.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900629|gb|EFG80011.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=472

 Score = 81.3 bits (199),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 116/391 (30%), Positives = 170/391 (44%), Gaps = 59/391 (15%)

Query  71   PPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIE  130
            PP    G  A A    + ALA  +SA    D ++  A+L A   + +G + L  LQQ+I 
Sbjct  36   PPPGLSGAGAEAAKRLDEALAKNHSALNDADDKLADALLKASSSSADGRQRLQALQQDII  95

Query  131  AAV-RIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKG  189
              V ++ S LDT  G +    FL GK  DI  V+  A LD+ S++ ++   ++ Y A + 
Sbjct  96   DQVNKLGSSLDTATGQQQLAEFLQGKTDDILNVLKNAGLDSDSQARVLDGLSARYQALQ-  154

Query  190  DRGDADD-------------RGPASVGS---GGA--PARGAGQQPELPTRAEPDCLLDSL  231
            D+   DD               P S G+   GGA  PA G G      T +  D LLD L
Sbjct  155  DKKPGDDPHTKGSSGDGTGSGNPDSTGTTPGGGADSPA-GTGDG----TGSGNDPLLDGL  209

Query  232  LLEDPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPL  291
               DP  L   L + GG     P+  +  SLP   G+ +P  G       G        +
Sbjct  210  A-SDP--LMSRLGMMGG-----PAMGALGSLPGALGSAIPSLGGGGGGGLGDLGSA---I  258

Query  292  SGLLRGVGDEPELTDFDERGQEVRDPADYEHSNE-------------PDERRADDREGAD  338
             G LR  G +P+    DE    ++DP+     ++             P ++     +   
Sbjct  259  GGALRDGGHDPDQA-SDEHVDSLKDPSGSHTGDDKPRDGTQPAGLHDPGDKADKGDKAGT  317

Query  339  EDAGLGKSESP---------PQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQ  389
            E+AG G +  P         P   T V LP+    TAA+  LA A +A  SG  I DAF 
Sbjct  318  ENAGSGSTPPPSAPAAPGQTPTPSTQVQLPDQSVRTAANGALAQAGRAVLSGDSIDDAFA  377

Query  390  QQGIAIPLPGTAVANPVDPARISAGDVGVFT  420
               + +P  G+ V++P+ P+R+  GDVG +T
Sbjct  378  GANLQLPPLGSPVSSPMAPSRLQFGDVGQYT  408


>gi|296165466|ref|ZP_06848001.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899181|gb|EFG78652.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=666

 Score = 69.7 bits (169),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 36/79 (46%), Positives = 51/79 (65%), Gaps = 1/79 (1%)

Query  355  TVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAG  414
            TVTLP+G T TA +PQ A AI+   +G  +  A++Q  I +P PGT V NPVDP+R++ G
Sbjct  521  TVTLPDGSTATARNPQTAQAIRDYLAGKTVDAAYRQNNIQLPPPGTPVTNPVDPSRLACG  580

Query  415  DVGVFTATPLP-LALAKLF  432
            D+ +F    +P L+  K F
Sbjct  581  DLAMFKDHYVPVLSSVKAF  599


>gi|119855149|ref|YP_935754.1| hypothetical protein Mkms_5764 [Mycobacterium sp. KMS]
 gi|119697867|gb|ABL94939.1| hypothetical protein Mkms_5764 [Mycobacterium sp. KMS]
Length=638

 Score = 68.6 bits (166),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 32/67 (48%), Positives = 47/67 (71%), Gaps = 0/67 (0%)

Query  354  TTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISA  413
            T +TLP+G T  A +P+LA A+KA   G P+ +A+++Q + +P PGT V  PVDP+R+SA
Sbjct  494  TAITLPDGSTANARTPELAQAVKAHLDGKPLEEAYREQHLELPPPGTPVTAPVDPSRLSA  553

Query  414  GDVGVFT  420
            G + VF 
Sbjct  554  GMLAVFN  560


>gi|333988699|ref|YP_004521313.1| hypothetical protein JDM601_0059 [Mycobacterium sp. JDM601]
 gi|333484667|gb|AEF34059.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=352

 Score = 57.0 bits (136),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 35/102 (35%), Positives = 54/102 (53%), Gaps = 1/102 (0%)

Query  90   LAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQ  149
            L  + + + +LD      +  AH    +  + L  L+ EI  A      L+TPAGAR FQ
Sbjct  15   LTRRLATSVELDRSFQEILRGAHQFNAQSRQRLDALEAEIRQAAAAWPALNTPAGARQFQ  74

Query  150  RFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDR  191
             +L GK ++I +VVA A+ D+  ++A + A T  Y   +GDR
Sbjct  75   AYLTGKTREIHKVVADAAADSQQRAAQVQALTGRYPL-RGDR  115


>gi|118615957|ref|YP_904289.1| hypothetical protein MUL_0043 [Mycobacterium ulcerans Agy99]
 gi|118568067|gb|ABL02818.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=126

 Score = 56.6 bits (135),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 43/121 (36%), Positives = 62/121 (52%), Gaps = 2/121 (1%)

Query  71   PPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIE  130
            P   + G A  AI   +A LA Q+    + D  +V A+  AH    +    L  +  EI+
Sbjct  6    PRSEQAGSALAAIRARQAELARQHDVLGEADRALVEALTRAHTVMRDSVRRLDAIGAEID  65

Query  131  AAVRIRSDL--DTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASK  188
             AV  +  L  DTP GAR+FQ FL+ K ++I  +VATA     +KSA++A   + Y  S 
Sbjct  66   GAVAGQDSLALDTPLGAREFQNFLLAKQREIATIVATAHELDRTKSAVLANLRAHYGESV  125

Query  189  G  189
            G
Sbjct  126  G  126


>gi|333992654|ref|YP_004525268.1| hypothetical protein JDM601_4014 [Mycobacterium sp. JDM601]
 gi|333488622|gb|AEF38014.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=439

 Score = 55.8 bits (133),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 39/118 (34%), Positives = 58/118 (50%), Gaps = 5/118 (4%)

Query  78   DAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS  137
            DAARA    E  L ++ +A+A  D    + +  A        + L  +  EI  A     
Sbjct  10   DAARA---RENKLVNRLAASAAADHDFEAILREAVRNNSASRQRLDAMAAEIRQAAATWP  66

Query  138  DLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDRGDAD  195
             LDTPAG+R FQR+L GK ++I ++V  A  D+  ++ L+   T+ Y    G  GD D
Sbjct  67   GLDTPAGSRQFQRYLTGKAREIHKIVNDAHADSEHRAGLVRTLTNRY--KLGGDGDTD  122


>gi|183980079|ref|YP_001848370.1| hypothetical protein MMAR_0044 [Mycobacterium marinum M]
 gi|183173405|gb|ACC38515.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=126

 Score = 55.1 bits (131),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 42/121 (35%), Positives = 62/121 (52%), Gaps = 2/121 (1%)

Query  71   PPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIE  130
            P   + G A  AI   +A LA Q+    + D  +  A+  AH    +    L  +  EI+
Sbjct  6    PRAEQAGSALAAIRARQAELARQHDVLGEADRALAEALTRAHTVMRDSVRRLDAIGAEID  65

Query  131  AAVRIRSDL--DTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASK  188
             AV  +  L  DTP GAR+FQ FL+ K ++I  +VATA     +KSA++A+  + Y  S 
Sbjct  66   GAVAGQDSLALDTPLGAREFQNFLLAKQREIATIVATAHELDRTKSAVLASLRAHYGESA  125

Query  189  G  189
            G
Sbjct  126  G  126


>gi|342860247|ref|ZP_08716899.1| hypothetical protein MCOL_15260 [Mycobacterium colombiense CECT 
3035]
 gi|342132625|gb|EGT85854.1| hypothetical protein MCOL_15260 [Mycobacterium colombiense CECT 
3035]
Length=121

 Score = 54.3 bits (129),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 37/120 (31%), Positives = 65/120 (55%), Gaps = 2/120 (1%)

Query  72   PDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEA  131
            P+++ G +  A+    +ALA Q+   ++ D  +   + +AH    E    L  + ++I+ 
Sbjct  2    PEQQPGPSLEAVEARRSALASQHGTASEADRVLTDVLTSAHEAARESVRRLDSIAEQIDH  61

Query  132  AVRIRSDL--DTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKG  189
            A   ++DL  DTP GAR+FQ+FL+ K ++I  VVA A     +K A++ +  + Y A  G
Sbjct  62   ATVHQADLALDTPMGAREFQKFLMAKQREIASVVAEAREFGQAKRAVLQSLRAQYGADSG  121


>gi|240172399|ref|ZP_04751058.1| hypothetical protein MkanA1_23993 [Mycobacterium kansasii ATCC 
12478]
Length=120

 Score = 54.3 bits (129),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 39/105 (38%), Positives = 58/105 (56%), Gaps = 2/105 (1%)

Query  82   AIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDL--  139
            AIA  +A L  Q  A  + D  +  A+ +AH    E    L  +  +IE AV  +++L  
Sbjct  11   AIAARQAVLGSQYQAITEADRVLAEALASAHATMRESIRRLDAIAADIERAVSDQAELAV  70

Query  140  DTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLY  184
            DTP GAR+FQRFL+ K ++I  +VA A     +KSA++A   + Y
Sbjct  71   DTPLGAREFQRFLLDKQREITTIVAGARELDHTKSAVLARLLAQY  115


>gi|289568686|ref|ZP_06448913.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289744463|ref|ZP_06503841.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749248|ref|ZP_06508626.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 7 more sequence titles
 gi|289752786|ref|ZP_06512164.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|298524230|ref|ZP_07011639.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289542440|gb|EFD46088.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289684991|gb|EFD52479.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289689835|gb|EFD57264.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289693373|gb|EFD60802.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|298494024|gb|EFI29318.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=282

 Score = 52.4 bits (124),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 42/111 (38%), Positives = 57/111 (52%), Gaps = 5/111 (4%)

Query  78   DAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS  137
            DAARA    E AL      +A+ D  VV  +  A+   V G   L  +  EIE AV  + 
Sbjct  17   DAARA---REVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQR  73

Query  138  --DLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDA  186
               LDTPAGAR+F RFL  K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  74   ALGLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  124


>gi|31791925|ref|NP_854418.1| hypothetical protein Mb0760 [Mycobacterium bovis AF2122/97]
 gi|121636661|ref|YP_976884.1| hypothetical protein BCG_0789 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989133|ref|YP_002643820.1| hypothetical protein JTY_0759 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31617512|emb|CAD93622.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492308|emb|CAL70775.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224772246|dbj|BAH25052.1| hypothetical protein JTY_0759 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341600677|emb|CCC63347.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=282

 Score = 52.4 bits (124),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 42/111 (38%), Positives = 57/111 (52%), Gaps = 5/111 (4%)

Query  78   DAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS  137
            DAARA    E AL      +A+ D  VV  +  A+   V G   L  +  EIE AV  + 
Sbjct  17   DAARA---REVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQR  73

Query  138  --DLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDA  186
               LDTPAGAR+F RFL  K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  74   ALGLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  124


>gi|289756827|ref|ZP_06516205.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294996224|ref|ZP_06801915.1| hypothetical protein Mtub2_17396 [Mycobacterium tuberculosis 
210]
 gi|289712391|gb|EFD76403.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|339293764|gb|AEJ45875.1| hypothetical protein CCDC5079_0685 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297403|gb|AEJ49513.1| hypothetical protein CCDC5180_0676 [Mycobacterium tuberculosis 
CCDC5180]
Length=287

 Score = 52.0 bits (123),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 42/111 (38%), Positives = 57/111 (52%), Gaps = 5/111 (4%)

Query  78   DAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS  137
            DAARA    E AL      +A+ D  VV  +  A+   V G   L  +  EIE AV  + 
Sbjct  22   DAARA---REVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQR  78

Query  138  --DLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDA  186
               LDTPAGAR+F RFL  K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  79   ALGLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  129


>gi|333989221|ref|YP_004521835.1| hypothetical protein JDM601_0581 [Mycobacterium sp. JDM601]
 gi|333485189|gb|AEF34581.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=411

 Score = 49.7 bits (117),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 32/88 (37%), Positives = 47/88 (54%), Gaps = 2/88 (2%)

Query  90   LAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDL--DTPAGARD  147
            LA +   T QLD   V+ +  A    + G   L  ++ EI  A+  +  L  DTPAGAR 
Sbjct  19   LATRLHTTTQLDRAFVATLRGAAQVALRGRRRLDGIEAEIRQALANQQALALDTPAGARQ  78

Query  148  FQRFLIGKLKDIREVVATASLDAASKSA  175
            FQ+FL  K +DI  V+A    D+ +++A
Sbjct  79   FQQFLTVKTRDIHRVIADTVADSHARAA  106


>gi|15607167|ref|NP_214539.1| hypothetical protein Rv0025 [Mycobacterium tuberculosis H37Rv]
 gi|148659785|ref|YP_001281308.1| hypothetical protein MRA_0028 [Mycobacterium tuberculosis H37Ra]
 gi|148821216|ref|YP_001285970.1| hypothetical protein TBFG_10025 [Mycobacterium tuberculosis F11]
 61 more sequence titles
 gi|167968157|ref|ZP_02550434.1| hypothetical protein MtubH3_09022 [Mycobacterium tuberculosis 
H37Ra]
 gi|253796940|ref|YP_003029941.1| hypothetical protein TBMG_00025 [Mycobacterium tuberculosis KZN 
1435]
 gi|254548957|ref|ZP_05139404.1| hypothetical protein Mtube_00570 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289441392|ref|ZP_06431136.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289445550|ref|ZP_06435294.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289552275|ref|ZP_06441485.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289567910|ref|ZP_06448137.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289572601|ref|ZP_06452828.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289747795|ref|ZP_06507173.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289756084|ref|ZP_06515462.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760122|ref|ZP_06519500.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995638|ref|ZP_06801329.1| hypothetical protein Mtub2_14312 [Mycobacterium tuberculosis 
210]
 gi|297632496|ref|ZP_06950276.1| hypothetical protein MtubK4_00140 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297729467|ref|ZP_06958585.1| hypothetical protein MtubKR_00150 [Mycobacterium tuberculosis 
KZN R506]
 gi|298527423|ref|ZP_07014832.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306778317|ref|ZP_07416654.1| hypothetical protein TMAG_00696 [Mycobacterium tuberculosis SUMu001]
 gi|306778846|ref|ZP_07417183.1| hypothetical protein TMBG_02490 [Mycobacterium tuberculosis SUMu002]
 gi|306782636|ref|ZP_07420958.1| hypothetical protein TMCG_03738 [Mycobacterium tuberculosis SUMu003]
 gi|306787002|ref|ZP_07425324.1| hypothetical protein TMDG_01909 [Mycobacterium tuberculosis SUMu004]
 gi|306791560|ref|ZP_07429862.1| hypothetical protein TMEG_00449 [Mycobacterium tuberculosis SUMu005]
 gi|306795623|ref|ZP_07433925.1| hypothetical protein TMFG_02188 [Mycobacterium tuberculosis SUMu006]
 gi|306801599|ref|ZP_07438267.1| hypothetical protein TMHG_03022 [Mycobacterium tuberculosis SUMu008]
 gi|306805806|ref|ZP_07442474.1| hypothetical protein TMGG_01496 [Mycobacterium tuberculosis SUMu007]
 gi|306970204|ref|ZP_07482865.1| hypothetical protein TMIG_00306 [Mycobacterium tuberculosis SUMu009]
 gi|306974437|ref|ZP_07487098.1| hypothetical protein TMJG_01206 [Mycobacterium tuberculosis SUMu010]
 gi|307082145|ref|ZP_07491315.1| hypothetical protein TMKG_01204 [Mycobacterium tuberculosis SUMu011]
 gi|307082485|ref|ZP_07491598.1| hypothetical protein TMLG_00757 [Mycobacterium tuberculosis SUMu012]
 gi|313656796|ref|ZP_07813676.1| hypothetical protein MtubKV_00150 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339630108|ref|YP_004721750.1| hypothetical protein MAF_00250 [Mycobacterium africanum GM041182]
 gi|14195333|sp|P71595.1|Y025_MYCTU RecName: Full=Uncharacterized protein Rv0025/MT0028
 gi|1552580|emb|CAB02445.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148503937|gb|ABQ71746.1| hypothetical protein MRA_0028 [Mycobacterium tuberculosis H37Ra]
 gi|148719743|gb|ABR04368.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253318443|gb|ACT23046.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289414311|gb|EFD11551.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289418508|gb|EFD15709.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289436907|gb|EFD19400.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289537032|gb|EFD41610.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289541663|gb|EFD45312.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289688323|gb|EFD55811.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289696671|gb|EFD64100.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289715686|gb|EFD79698.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497217|gb|EFI32511.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308213462|gb|EFO72861.1| hypothetical protein TMAG_00696 [Mycobacterium tuberculosis SUMu001]
 gi|308328179|gb|EFP17030.1| hypothetical protein TMBG_02490 [Mycobacterium tuberculosis SUMu002]
 gi|308332484|gb|EFP21335.1| hypothetical protein TMCG_03738 [Mycobacterium tuberculosis SUMu003]
 gi|308336296|gb|EFP25147.1| hypothetical protein TMDG_01909 [Mycobacterium tuberculosis SUMu004]
 gi|308339900|gb|EFP28751.1| hypothetical protein TMEG_00449 [Mycobacterium tuberculosis SUMu005]
 gi|308343915|gb|EFP32766.1| hypothetical protein TMFG_02188 [Mycobacterium tuberculosis SUMu006]
 gi|308347699|gb|EFP36550.1| hypothetical protein TMGG_01496 [Mycobacterium tuberculosis SUMu007]
 gi|308351616|gb|EFP40467.1| hypothetical protein TMHG_03022 [Mycobacterium tuberculosis SUMu008]
 gi|308352323|gb|EFP41174.1| hypothetical protein TMIG_00306 [Mycobacterium tuberculosis SUMu009]
 gi|308356223|gb|EFP45074.1| hypothetical protein TMJG_01206 [Mycobacterium tuberculosis SUMu010]
 gi|308360213|gb|EFP49064.1| hypothetical protein TMKG_01204 [Mycobacterium tuberculosis SUMu011]
 gi|308367775|gb|EFP56626.1| hypothetical protein TMLG_00757 [Mycobacterium tuberculosis SUMu012]
 gi|326905786|gb|EGE52719.1| hypothetical protein TBPG_03751 [Mycobacterium tuberculosis W-148]
 gi|328456731|gb|AEB02154.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339293103|gb|AEJ45214.1| hypothetical protein CCDC5079_0024 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339296752|gb|AEJ48862.1| hypothetical protein CCDC5180_0025 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339329464|emb|CCC25099.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|344217843|gb|AEM98473.1| hypothetical protein MTCTRI2_0028 [Mycobacterium tuberculosis 
CTRI-2]
Length=120

 Score = 49.7 bits (117),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 40/111 (37%), Positives = 60/111 (55%), Gaps = 4/111 (3%)

Query  77   GDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIR  136
            G +   I + +A LA Q+ A A+ D ++   + +AH    E    L  +  E++ AV  +
Sbjct  6    GSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQ  65

Query  137  SDL--DTPAGARDFQRFLIGKLKDIREVVATA-SLDAASKSALMAAWTSLY  184
              L  DTP GAR+FQ FL+ K ++I  VVA A  LD A KSA++    + Y
Sbjct  66   DQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRA-KSAVLKRLRAQY  115


>gi|148821944|ref|YP_001286698.1| hypothetical protein TBFG_10753 [Mycobacterium tuberculosis F11]
 gi|254363685|ref|ZP_04979731.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289552996|ref|ZP_06442206.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 25 more sequence titles
 gi|297730221|ref|ZP_06959339.1| hypothetical protein MtubKR_03970 [Mycobacterium tuberculosis 
KZN R506]
 gi|306783394|ref|ZP_07421716.1| hypothetical protein TMCG_03553 [Mycobacterium tuberculosis SUMu003]
 gi|306794532|ref|ZP_07432834.1| hypothetical protein TMEG_02115 [Mycobacterium tuberculosis SUMu005]
 gi|306796497|ref|ZP_07434799.1| hypothetical protein TMFG_03412 [Mycobacterium tuberculosis SUMu006]
 gi|306802357|ref|ZP_07439025.1| hypothetical protein TMHG_03768 [Mycobacterium tuberculosis SUMu008]
 gi|306966764|ref|ZP_07479425.1| hypothetical protein TMIG_01648 [Mycobacterium tuberculosis SUMu009]
 gi|308231624|ref|ZP_07413188.2| hypothetical protein TMAG_02623 [Mycobacterium tuberculosis SUMu001]
 gi|308369973|ref|ZP_07419753.2| hypothetical protein TMBG_03346 [Mycobacterium tuberculosis SUMu002]
 gi|308375240|ref|ZP_07443234.2| hypothetical protein TMGG_03762 [Mycobacterium tuberculosis SUMu007]
 gi|308378706|ref|ZP_07483616.2| hypothetical protein TMJG_02487 [Mycobacterium tuberculosis SUMu010]
 gi|308396521|ref|ZP_07492359.2| hypothetical protein TMLG_03233 [Mycobacterium tuberculosis SUMu012]
 gi|134149199|gb|EBA41244.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148720471|gb|ABR05096.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|289437628|gb|EFD20121.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|308216740|gb|EFO76139.1| hypothetical protein TMAG_02623 [Mycobacterium tuberculosis SUMu001]
 gi|308325717|gb|EFP14568.1| hypothetical protein TMBG_03346 [Mycobacterium tuberculosis SUMu002]
 gi|308331885|gb|EFP20736.1| hypothetical protein TMCG_03553 [Mycobacterium tuberculosis SUMu003]
 gi|308337129|gb|EFP25980.1| hypothetical protein TMEG_02115 [Mycobacterium tuberculosis SUMu005]
 gi|308343154|gb|EFP32005.1| hypothetical protein TMFG_03412 [Mycobacterium tuberculosis SUMu006]
 gi|308347042|gb|EFP35893.1| hypothetical protein TMGG_03762 [Mycobacterium tuberculosis SUMu007]
 gi|308350925|gb|EFP39776.1| hypothetical protein TMHG_03768 [Mycobacterium tuberculosis SUMu008]
 gi|308355615|gb|EFP44466.1| hypothetical protein TMIG_01648 [Mycobacterium tuberculosis SUMu009]
 gi|308359574|gb|EFP48425.1| hypothetical protein TMJG_02487 [Mycobacterium tuberculosis SUMu010]
 gi|308367113|gb|EFP55964.1| hypothetical protein TMLG_03233 [Mycobacterium tuberculosis SUMu012]
 gi|323720866|gb|EGB29933.1| hypothetical protein TMMG_03446 [Mycobacterium tuberculosis CDC1551A]
Length=267

 Score = 49.7 bits (117),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 37/102 (37%), Positives = 52/102 (51%), Gaps = 2/102 (1%)

Query  87   EAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAG  144
            E AL      +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAG
Sbjct  8    EVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAG  67

Query  145  ARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDA  186
            AR+F RFL  K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  68   ARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  109


>gi|15607879|ref|NP_215253.1| hypothetical protein Rv0739 [Mycobacterium tuberculosis H37Rv]
 gi|15840148|ref|NP_335185.1| hypothetical protein MT0764 [Mycobacterium tuberculosis CDC1551]
 gi|148660515|ref|YP_001282038.1| hypothetical protein MRA_0748 [Mycobacterium tuberculosis H37Ra]
 18 more sequence titles
 gi|167968300|ref|ZP_02550577.1| hypothetical protein MtubH3_09824 [Mycobacterium tuberculosis 
H37Ra]
 gi|253797683|ref|YP_003030684.1| hypothetical protein TBMG_00753 [Mycobacterium tuberculosis KZN 
1435]
 gi|254231057|ref|ZP_04924384.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254549703|ref|ZP_05140150.1| hypothetical protein Mtube_04440 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289760867|ref|ZP_06520245.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|297633241|ref|ZP_06951021.1| hypothetical protein MtubK4_03915 [Mycobacterium tuberculosis 
KZN 4207]
 gi|308379853|ref|ZP_07487855.2| hypothetical protein TMKG_04027 [Mycobacterium tuberculosis SUMu011]
 gi|313657548|ref|ZP_07814428.1| hypothetical protein MtubKV_03960 [Mycobacterium tuberculosis 
KZN V2475]
 gi|14195432|sp|O53802.1|Y739_MYCTU RecName: Full=Uncharacterized protein Rv0739/MT0764
 gi|2911013|emb|CAA17506.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13880300|gb|AAK44999.1| hypothetical protein MT0764 [Mycobacterium tuberculosis CDC1551]
 gi|124600116|gb|EAY59126.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148504667|gb|ABQ72476.1| hypothetical protein MRA_0748 [Mycobacterium tuberculosis H37Ra]
 gi|253319186|gb|ACT23789.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289708373|gb|EFD72389.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|308363477|gb|EFP52328.1| hypothetical protein TMKG_04027 [Mycobacterium tuberculosis SUMu011]
 gi|328457463|gb|AEB02886.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|344218564|gb|AEM99194.1| hypothetical protein MTCTRI2_0755 [Mycobacterium tuberculosis 
CTRI-2]
Length=268

 Score = 49.7 bits (117),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 37/102 (37%), Positives = 52/102 (51%), Gaps = 2/102 (1%)

Query  87   EAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAG  144
            E AL      +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAG
Sbjct  9    EVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAG  68

Query  145  ARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDA  186
            AR+F RFL  K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  69   ARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110


>gi|296167100|ref|ZP_06849510.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897542|gb|EFG77138.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=110

 Score = 49.3 bits (116),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 36/107 (34%), Positives = 56/107 (53%), Gaps = 3/107 (2%)

Query  87   EAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDL--DTPAG  144
            ++AL  Q    A  D  +   + +AH +  EG   L  +  +I+ A   ++ L  DTP G
Sbjct  5    QSALVGQQGTVADADRVLAEVLTSAHAEMREGARRLDAIADQIDHATVHQAGLAIDTPMG  64

Query  145  ARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDR  191
            AR+FQRFL+ K ++I  VV  A   + +K A++      Y A+ GDR
Sbjct  65   AREFQRFLLAKQREITAVVDEARALSRAKKAVLEGLRDQY-ATGGDR  110


>gi|340625058|ref|YP_004743510.1| hypothetical protein MCAN_00241 [Mycobacterium canettii CIPT 
140010059]
 gi|340003248|emb|CCC42365.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=120

 Score = 48.9 bits (115),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 39/105 (38%), Positives = 58/105 (56%), Gaps = 4/105 (3%)

Query  83   IADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDL--D  140
            I + +A LA Q+ A A+ D ++   + +AH    E    L  +  E++ AV  +  L  D
Sbjct  12   IQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVD  71

Query  141  TPAGARDFQRFLIGKLKDIREVVATA-SLDAASKSALMAAWTSLY  184
            TP GAR+FQ FL+ K ++I  VVA A  LD A KSA++    + Y
Sbjct  72   TPMGAREFQTFLVAKQREIVAVVAAAHELDRA-KSAVLKRLRAQY  115


>gi|254819083|ref|ZP_05224084.1| hypothetical protein MintA_04108 [Mycobacterium intracellulare 
ATCC 13950]
Length=120

 Score = 48.9 bits (115),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 38/111 (35%), Positives = 63/111 (57%), Gaps = 4/111 (3%)

Query  77   GDAARAIADAEAALAHQNSATAQLDLQVVSAILN-AHLKTVEGGESLHELQQEIEAAVRI  135
            G +  A+    + LA Q+ A ++ DL V++ +LN AH    E    L  + ++I+ AV  
Sbjct  6    GHSLEAVEARRSTLASQHGAVSEADL-VLTDVLNTAHSAARESVRRLDAIAEQIDHAVVQ  64

Query  136  RSDL--DTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLY  184
            +++L  DTP GAR+F +FL+ K ++I  VVA A   A +K A++    + Y
Sbjct  65   QANLAVDTPMGAREFHKFLLDKQREIAAVVAGARELAQAKRAVLENLRAQY  115


>gi|289764140|ref|ZP_06523518.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289711646|gb|EFD75662.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=120

 Score = 48.1 bits (113),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 39/104 (38%), Positives = 58/104 (56%), Gaps = 4/104 (3%)

Query  77   GDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIR  136
            G +   I + +A LA Q+ A A+ D ++   + +AH    E    L  +  E++ AV  +
Sbjct  6    GSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQ  65

Query  137  SDL--DTPAGARDFQRFLIGKLKDIREVVATA-SLDAASKSALM  177
              L  DTP GAR+FQ FL+ K ++I  VVA A  LD A KSA++
Sbjct  66   DQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRA-KSAVL  108


>gi|289442140|ref|ZP_06431884.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446299|ref|ZP_06436043.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289573347|ref|ZP_06453574.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 6 more sequence titles
 gi|308371747|ref|ZP_07426086.2| hypothetical protein TMDG_02466 [Mycobacterium tuberculosis SUMu004]
 gi|289415059|gb|EFD12299.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419257|gb|EFD16458.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289537778|gb|EFD42356.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|308335672|gb|EFP24523.1| hypothetical protein TMDG_02466 [Mycobacterium tuberculosis SUMu004]
 gi|326905039|gb|EGE51972.1| hypothetical protein TBPG_02966 [Mycobacterium tuberculosis W-148]
Length=259

 Score = 47.8 bits (112),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query  89   ALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGAR  146
            AL      +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR
Sbjct  2    ALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGAR  61

Query  147  DFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDA  186
            +F RFL  K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  62   NFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  101


>gi|254773088|ref|ZP_05214604.1| hypothetical protein MaviaA2_00181 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=120

 Score = 47.0 bits (110),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 34/106 (33%), Positives = 57/106 (54%), Gaps = 4/106 (3%)

Query  88   AALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDL--DTPAGA  145
            +ALA Q+ A ++ D  +   + +AH    E    L  + ++I+ AV  ++DL  DTP GA
Sbjct  17   SALADQHGAASEADRVLAEVLASAHAAAQESARRLDAIAEQIDRAVAHQADLAVDTPLGA  76

Query  146  RDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDR  191
            R+F +FL+ K  +I  VV  A   + +K  ++    + Y A  G+R
Sbjct  77   REFHKFLLAKQHEIASVVTEAQELSRAKRVVLENLRAQYSA--GNR  120


>gi|336459448|gb|EGO38390.1| Biofilm regulator BssS [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=120

 Score = 46.6 bits (109),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 34/106 (33%), Positives = 56/106 (53%), Gaps = 4/106 (3%)

Query  88   AALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDL--DTPAGA  145
            +ALA Q+ A ++ D  +   + +AH    E    L  + ++I+ AV  ++DL  DTP GA
Sbjct  17   SALADQHGAASEADRVLAEVLASAHAAAQESARRLDAIAEQIDRAVAHQADLAIDTPLGA  76

Query  146  RDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDR  191
            R+F +FL+ K  +I  VV  A     +K  ++    + Y A  G+R
Sbjct  77   REFHKFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSA--GNR  120


>gi|289748489|ref|ZP_06507867.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689076|gb|EFD56505.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=107

 Score = 46.2 bits (108),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 33/92 (36%), Positives = 50/92 (55%), Gaps = 2/92 (2%)

Query  77   GDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIR  136
            G +   I + +A LA Q+ A A+ D ++   + +AH    E    L  +  E++ AV  +
Sbjct  6    GSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQ  65

Query  137  SDL--DTPAGARDFQRFLIGKLKDIREVVATA  166
              L  DTP GAR+FQ FL+ K ++I  VVA A
Sbjct  66   DQLAVDTPMGAREFQTFLVAKQREIVAVVAAA  97


>gi|118465006|ref|YP_879343.1| hypothetical protein MAV_0043 [Mycobacterium avium 104]
 gi|118166293|gb|ABK67190.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=120

 Score = 46.2 bits (108),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 33/106 (32%), Positives = 57/106 (54%), Gaps = 4/106 (3%)

Query  88   AALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDL--DTPAGA  145
            +ALA Q+ A ++ D  +   + +AH    E    L  + ++I+ AV  ++DL  DTP GA
Sbjct  17   SALADQHGAASESDRVLAEVLASAHAAAQESARRLDAIAEQIDRAVAHQADLAVDTPLGA  76

Query  146  RDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDR  191
            R+F +FL+ K  +I  V+  A   + +K  ++    + Y A  G+R
Sbjct  77   REFHKFLLAKQHEIASVITEAQELSRAKRVVLENLRAQYSA--GNR  120


>gi|31791202|ref|NP_853695.1| hypothetical protein Mb0026 [Mycobacterium bovis AF2122/97]
 gi|121635935|ref|YP_976158.1| hypothetical protein BCG_0056 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988408|ref|YP_002643075.1| hypothetical protein JTY_0026 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31616787|emb|CAD92888.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121491582|emb|CAL70040.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224771521|dbj|BAH24327.1| hypothetical protein JTY_0026 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341599951|emb|CCC62619.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=120

 Score = 45.1 bits (105),  Expect = 0.022, Method: Compositional matrix adjust.
 Identities = 39/111 (36%), Positives = 59/111 (54%), Gaps = 4/111 (3%)

Query  77   GDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIR  136
            G +   I + +A LA Q+ A A+ D ++   + +AH    E    L  +  E++ AV  +
Sbjct  6    GSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQ  65

Query  137  SDL--DTPAGARDFQRFLIGKLKDIREVVATA-SLDAASKSALMAAWTSLY  184
              L  DT  GAR+FQ FL+ K ++I  VVA A  LD A KSA++    + Y
Sbjct  66   DQLAVDTLMGAREFQTFLVAKQREIVAVVAAAHELDRA-KSAVLKRLRAQY  115


>gi|333990938|ref|YP_004523552.1| hypothetical protein JDM601_2298 [Mycobacterium sp. JDM601]
 gi|333486906|gb|AEF36298.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=452

 Score = 44.7 bits (104),  Expect = 0.032, Method: Compositional matrix adjust.
 Identities = 36/112 (33%), Positives = 54/112 (49%), Gaps = 2/112 (1%)

Query  75   EQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVR  134
            ++G  A      E +L  +    A+ D  + +A+  A     EG   L  +  EI  A+ 
Sbjct  4    QRGAHAETAQSREVSLIVRQQTAARTDDVLSTALRGAVDHAREGRRRLDTIGAEIRDALG  63

Query  135  IRSD--LDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLY  184
             +     DTPAG R FQ FL  K +DIR VVA  + D+ + +AL+ +  S Y
Sbjct  64   DQRAPASDTPAGVRQFQLFLAAKARDIRRVVADVAADSRAGTALLRSLGSDY  115



Lambda     K      H
   0.311    0.130    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 927821258770




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40