BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0029 Length=365 Score E Sequences producing significant alignments: (Bits) Value gi|15607171|ref|NP_214543.1| hypothetical protein Rv0029 [Mycoba... 727 0.0 gi|298527427|ref|ZP_07014836.1| conserved hypothetical protein [... 725 0.0 gi|289572606|ref|ZP_06452833.1| conserved hypothetical protein [... 725 0.0 gi|31791206|ref|NP_853699.1| hypothetical protein Mb0030 [Mycoba... 724 0.0 gi|254548962|ref|ZP_05139409.1| hypothetical protein Mtube_00595... 720 0.0 gi|340625062|ref|YP_004743514.1| hypothetical protein MCAN_00281... 681 0.0 gi|308375045|ref|ZP_07442479.2| hypothetical protein TMGG_01500 ... 580 1e-163 gi|323717369|gb|EGB26574.1| hypothetical protein TMMG_00449 [Myc... 481 7e-134 gi|183980083|ref|YP_001848374.1| hypothetical protein MMAR_0048 ... 345 5e-93 gi|118615961|ref|YP_904293.1| hypothetical protein MUL_0047 [Myc... 342 5e-92 gi|240172404|ref|ZP_04751063.1| hypothetical protein MkanA1_2401... 338 8e-91 gi|15839405|ref|NP_334442.1| hypothetical protein MT0033 [Mycoba... 302 6e-80 gi|254819079|ref|ZP_05224080.1| hypothetical protein MintA_04088... 238 1e-60 gi|342860243|ref|ZP_08716895.1| hypothetical protein MCOL_15240 ... 234 2e-59 gi|118467122|ref|YP_879348.1| hypothetical protein MAV_0048 [Myc... 223 5e-56 gi|41406139|ref|NP_958975.1| hypothetical protein MAP0041 [Mycob... 222 8e-56 gi|336459444|gb|EGO38386.1| hypothetical protein MAPs_03840 [Myc... 221 1e-55 gi|254773093|ref|ZP_05214609.1| hypothetical protein MaviaA2_002... 216 6e-54 gi|333988685|ref|YP_004521299.1| hypothetical protein JDM601_004... 214 2e-53 gi|296167095|ref|ZP_06849505.1| conserved hypothetical protein [... 214 2e-53 gi|254364895|ref|ZP_04980941.1| hypothetical protein TBHG_02040 ... 126 7e-27 gi|289554133|ref|ZP_06443343.1| conserved hypothetical protein [... 125 1e-26 gi|148823298|ref|YP_001288052.1| hypothetical protein TBFG_12119... 125 1e-26 gi|326903697|gb|EGE50630.1| hypothetical protein TBPG_01577 [Myc... 125 1e-26 gi|121637967|ref|YP_978191.1| hypothetical protein BCG_2101 [Myc... 125 1e-26 gi|289762244|ref|ZP_06521622.1| conserved hypothetical protein [... 125 1e-26 gi|339632118|ref|YP_004723760.1| hypothetical protein MAF_20960 ... 125 1e-26 gi|31793265|ref|NP_855758.1| hypothetical protein Mb2108 [Mycoba... 125 1e-26 gi|289758201|ref|ZP_06517579.1| conserved hypothetical protein [... 125 1e-26 gi|298525582|ref|ZP_07012991.1| conserved hypothetical protein [... 125 1e-26 gi|289443588|ref|ZP_06433332.1| conserved hypothetical protein [... 125 1e-26 gi|15841575|ref|NP_336612.1| hypothetical protein MT2144 [Mycoba... 124 2e-26 gi|308373321|ref|ZP_07431854.2| hypothetical protein TMEG_02449 ... 124 2e-26 gi|15609219|ref|NP_216598.1| hypothetical protein Rv2082 [Mycoba... 124 3e-26 gi|254777636|ref|ZP_05219152.1| hypothetical protein MaviaA2_236... 124 3e-26 gi|336459792|gb|EGO38706.1| hypothetical protein MAPs_46830 [Myc... 123 5e-26 gi|254819417|ref|ZP_05224418.1| hypothetical protein MintA_05809... 122 8e-26 gi|41410424|ref|NP_963260.1| hypothetical protein MAP4326c [Myco... 121 2e-25 gi|342862328|ref|ZP_08718969.1| hypothetical protein MCOL_25678 ... 119 6e-25 gi|118465280|ref|YP_884399.1| hypothetical protein MAV_5288 [Myc... 117 3e-24 gi|340627094|ref|YP_004745546.1| hypothetical protein MCAN_21071... 116 6e-24 gi|296167167|ref|ZP_06849574.1| conserved hypothetical protein [... 114 2e-23 gi|240168379|ref|ZP_04747038.1| hypothetical protein MkanA1_0365... 108 2e-21 gi|289760071|ref|ZP_06519449.1| conserved hypothetical protein [... 106 8e-21 gi|308371543|ref|ZP_07425271.2| hypothetical protein TMDG_01859 ... 105 9e-21 gi|308373859|ref|ZP_07433871.2| putative Tat (twin-arginine tran... 105 1e-20 gi|289764092|ref|ZP_06523470.1| conserved hypothetical protein [... 105 1e-20 gi|31795072|ref|NP_857565.1| hypothetical protein Mb3928c [Mycob... 104 2e-20 gi|183983065|ref|YP_001851356.1| hypothetical protein MMAR_3066 ... 103 4e-20 gi|148825107|ref|YP_001289861.1| hypothetical protein TBFG_13934... 103 6e-20 >gi|15607171|ref|NP_214543.1| hypothetical protein Rv0029 [Mycobacterium tuberculosis H37Rv] gi|148659789|ref|YP_001281312.1| hypothetical protein MRA_0032 [Mycobacterium tuberculosis H37Ra] gi|148821220|ref|YP_001285974.1| hypothetical protein TBFG_10029 [Mycobacterium tuberculosis F11] 57 more sequence titles Length=365 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/365 (99%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK Sbjct 1 MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV Sbjct 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 Query 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE Sbjct 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 Query 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT Sbjct 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 Query 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA Sbjct 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 Query 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE Sbjct 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 Query 361 LDSRR 365 LDSRR Sbjct 361 LDSRR 365 >gi|298527427|ref|ZP_07014836.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497221|gb|EFI32515.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=365 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/365 (99%), Positives = 364/365 (99%), Gaps = 0/365 (0%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK Sbjct 1 MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV Sbjct 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 Query 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE Sbjct 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 Query 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT Sbjct 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 Query 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 YTPGDSLRR VDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA Sbjct 241 YTPGDSLRRTVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 Query 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE Sbjct 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 Query 361 LDSRR 365 LDSRR Sbjct 361 LDSRR 365 >gi|289572606|ref|ZP_06452833.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339630112|ref|YP_004721754.1| hypothetical protein MAF_00290 [Mycobacterium africanum GM041182] gi|289537037|gb|EFD41615.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339329468|emb|CCC25103.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=365 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/365 (99%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK Sbjct 1 MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV Sbjct 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 Query 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE Sbjct 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 Query 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT Sbjct 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 Query 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA Sbjct 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 Query 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE Sbjct 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 Query 361 LDSRR 365 +DSRR Sbjct 361 VDSRR 365 >gi|31791206|ref|NP_853699.1| hypothetical protein Mb0030 [Mycobacterium bovis AF2122/97] gi|121635939|ref|YP_976162.1| hypothetical protein BCG_0060 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988412|ref|YP_002643079.1| hypothetical protein JTY_0030 [Mycobacterium bovis BCG str. Tokyo 172] gi|31616791|emb|CAD92892.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121491586|emb|CAL70044.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771525|dbj|BAH24331.1| hypothetical protein JTY_0030 [Mycobacterium bovis BCG str. Tokyo 172] gi|341599955|emb|CCC62623.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=365 Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/365 (99%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK Sbjct 1 MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV Sbjct 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 Query 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE Sbjct 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 Query 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 PRLNWAVGV+ADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT Sbjct 181 PRLNWAVGVNADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 Query 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA Sbjct 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 Query 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE Sbjct 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 Query 361 LDSRR 365 LDSRR Sbjct 361 LDSRR 365 >gi|254548962|ref|ZP_05139409.1| hypothetical protein Mtube_00595 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=365 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/365 (99%), Positives = 363/365 (99%), Gaps = 0/365 (0%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGRWSARQRLRRATRESLTIPTFSSSLDCT RVIGGLW AELS+NTAETATLAEHLK Sbjct 1 MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTPRVIGGLWSAELSTNTAETATLAEHLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV Sbjct 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 Query 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE Sbjct 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 Query 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT Sbjct 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 Query 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA Sbjct 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 Query 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE Sbjct 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 Query 361 LDSRR 365 LDSRR Sbjct 361 LDSRR 365 >gi|340625062|ref|YP_004743514.1| hypothetical protein MCAN_00281 [Mycobacterium canettii CIPT 140010059] gi|340003252|emb|CCC42369.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=365 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/365 (97%), Positives = 359/365 (99%), Gaps = 0/365 (0%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK Sbjct 1 MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 ADLHRIVGSANDELMVI RAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV Sbjct 61 ADLHRIVGSANDELMVIRRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 Query 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE Sbjct 121 PVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQE 180 Query 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKT 240 PRLNWAVGVHADGTTVLVTDVAHGWIPPG+ALPEGVRLLAPARRAGRAPELVGITTCCKT Sbjct 181 PRLNWAVGVHADGTTVLVTDVAHGWIPPGVALPEGVRLLAPARRAGRAPELVGITTCCKT 240 Query 241 YTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGA 300 YTPGDSL R VDSTAPTSSVQPRALPAIAGLSVELGIATQR DGLP+IVHA+ATAAGNGA Sbjct 241 YTPGDSLGRVVDSTAPTSSVQPRALPAIAGLSVELGIATQRRDGLPRIVHALATAAGNGA 300 Query 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRE 360 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATE SVTGDP+AANYHFAWFRE Sbjct 301 AAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATEGSVTGDPVAANYHFAWFRE 360 Query 361 LDSRR 365 L SRR Sbjct 361 LGSRR 365 >gi|308375045|ref|ZP_07442479.2| hypothetical protein TMGG_01500 [Mycobacterium tuberculosis SUMu007] gi|308347702|gb|EFP36553.1| hypothetical protein TMGG_01500 [Mycobacterium tuberculosis SUMu007] Length=291 Score = 580 bits (1495), Expect = 1e-163, Method: Compositional matrix adjust. Identities = 291/291 (100%), Positives = 291/291 (100%), Gaps = 0/291 (0%) Query 75 MVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRMRGAGGSD 134 MVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRMRGAGGSD Sbjct 1 MVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRMRGAGGSD 60 Query 135 LDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGT 194 LDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGT Sbjct 61 LDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGT 120 Query 195 TVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDST 254 TVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDST Sbjct 121 TVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDST 180 Query 255 APTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDT 314 APTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDT Sbjct 181 APTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDT 240 Query 315 ALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR 365 ALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR Sbjct 241 ALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR 291 >gi|323717369|gb|EGB26574.1| hypothetical protein TMMG_00449 [Mycobacterium tuberculosis CDC1551A] Length=239 Score = 481 bits (1238), Expect = 7e-134, Method: Compositional matrix adjust. Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%) Query 127 MRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWA 186 MRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWA Sbjct 1 MRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWA 60 Query 187 VGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDS 246 VGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDS Sbjct 61 VGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDS 120 Query 247 LRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVD 306 LRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVD Sbjct 121 LRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVD 180 Query 307 LLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR 365 LLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR Sbjct 181 LLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR 239 >gi|183980083|ref|YP_001848374.1| hypothetical protein MMAR_0048 [Mycobacterium marinum M] gi|183173409|gb|ACC38519.1| conserved hypothetical protein [Mycobacterium marinum M] Length=368 Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 203/369 (56%), Positives = 246/369 (67%), Gaps = 7/369 (1%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGR +ARQRLR+A +ESL IP FSS DCT VIGGLWP ELS + ETATLAE+L+ Sbjct 1 MAIFGRRTARQRLRKAAQESLAIPAFSSPPDCTPWVIGGLWPTELSRDAPETATLAEYLE 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQ-ITGR 119 ADL RI SAN+EL + A M DS RRA E RVID ARA A++RVESA +LR+ + Sbjct 61 ADLQRIADSANEELASLRHAVMLDSDRRAAEARVIDDARARAVQRVESARNQLREGASTE 120 Query 120 VPVEIPRMRGAGGSDLDTTRLMPAV---TVVQPADQACTDWPVAAAEDDEARLQRLLAFV 176 PV P + ++ + P V A A A E D+ RL+RLL FV Sbjct 121 PPVAPPDVADPNAAEPGSQPQPPTAGRPDAVDAARAAARAPAPAVPESDDQRLRRLLMFV 180 Query 177 ARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITT 236 ARQEPRLNWA+G +G TVLVTDVAHGWIPPGIALP+GVRLL P RR+GR LV T Sbjct 181 ARQEPRLNWAIGQRPEG-TVLVTDVAHGWIPPGIALPQGVRLLPPKRRSGRLAALVDAAT 239 Query 237 CCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAA 296 +Y+PGD L A + TA SSV+PR LP ++ EL AT+ GLP+ H +A AA Sbjct 240 GLLSYSPGDPLPWADEDTATRSSVRPRELPMADNVARELCDATRSRVGLPRRAHVLAKAA 299 Query 297 GNGAAA--EEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYH 354 G A +E+DLLRVH+DTA H V+A YP +D +LLNCMLLAAT SV+GD + ANYH Sbjct 300 DAGTAVVEDEIDLLRVHLDTARHEVVAHYPSIDGEVLLNCMLLAATASSVSGDAVTANYH 359 Query 355 FAWFRELDS 363 AWFREL++ Sbjct 360 LAWFRELNA 368 >gi|118615961|ref|YP_904293.1| hypothetical protein MUL_0047 [Mycobacterium ulcerans Agy99] gi|118568071|gb|ABL02822.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=368 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 199/369 (54%), Positives = 243/369 (66%), Gaps = 7/369 (1%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGR +ARQRLR+A +ESL IP FSS DCT VIGGLWP ELS + ETATLAE+L+ Sbjct 1 MAIFGRRTARQRLRKAAQESLVIPAFSSPPDCTPWVIGGLWPTELSRDAPETATLAEYLE 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRV 120 ADL RI SAN+EL + A M DS RRA E RVID ARA A++R+ESA +LR+ Sbjct 61 ADLQRIADSANEELASLRHAVMLDSDRRAAEARVIDEARARAVQRIESARNQLREGASTE 120 Query 121 PVEIPRMRGAGGSDLDTTRLMPAV----TVVQPADQACTDWPVAAAEDDEARLQRLLAFV 176 P PR + ++ P + V A A A E D+ RL+RLL FV Sbjct 121 PPVAPRDIADPNAGEPGSQPQPPMAGRPDAVDAARAAARAPAPAVPESDDQRLRRLLMFV 180 Query 177 ARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITT 236 ARQEPRLNWA+G ++G TVLVTDVAHGWIPPGIALP+GVRLL P RR+GR LV T Sbjct 181 ARQEPRLNWAIGRQSEG-TVLVTDVAHGWIPPGIALPQGVRLLPPKRRSGRLAALVDAAT 239 Query 237 CCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAA 296 +Y+PGD L + TA SSV+PR LP ++ EL AT+ GLP++ H +A AA Sbjct 240 GSLSYSPGDPLPWVDEDTATRSSVRPRELPMADNVARELCDATRSRVGLPRMAHVLAKAA 299 Query 297 GNGAAA--EEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYH 354 G A +E+DLLRVH+DTA H ++A YP +D +LLN MLLAAT SV GD + ANYH Sbjct 300 DAGTAVVEDEIDLLRVHLDTARHQIVAHYPSIDGEVLLNWMLLAATASSVNGDAVTANYH 359 Query 355 FAWFRELDS 363 AWFREL + Sbjct 360 LAWFRELKA 368 >gi|240172404|ref|ZP_04751063.1| hypothetical protein MkanA1_24018 [Mycobacterium kansasii ATCC 12478] Length=375 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 201/377 (54%), Positives = 235/377 (63%), Gaps = 51/377 (13%) Query 36 VIGGLWPAELSSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVI 95 +IGGLWPAELS N AETA LA +LKADL RIV SANDEL + A M DS RRA E VI Sbjct 1 MIGGLWPAELSPNNAETAALAAYLKADLDRIVSSANDELRTLRSAVMLDSARRAAEAAVI 60 Query 96 DRARASAMRRVESAMRELRQITGRVPVEIPR---MRGAGGSDLDTTRLMPAVTVVQPA-- 150 D ARA A+RRVES +R+LR P +PR G+GG+DL+ TR++PA+ P Sbjct 61 DEARAWAVRRVESTLRQLRGQPA--PPVVPRPSATAGSGGTDLERTRVLPAIKDEHPGAA 118 Query 151 -------------DQACTDWP-----------------------------VAAAEDDEAR 168 D + P VAA E D+ R Sbjct 119 DDLASTRVLPVVEDAIGEEQPGAHEKEHVQLAAPPEAEIAVAESVAPARGVAAPESDDER 178 Query 169 LQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRA 228 LQRLL FVARQEPRLNWAVG ADG TVLVTD+AHGW+PPG+ LPEGV+LL P RR+G Sbjct 179 LQRLLTFVARQEPRLNWAVGQRADGLTVLVTDLAHGWVPPGLMLPEGVQLLEPQRRSGGI 238 Query 229 PELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKI 288 +L+G T TY PGD L D T T S +PR LP L+ EL T+ DGLP+I Sbjct 239 AKLIGTTARLATYRPGDFLGWTSDFTPTTPSPKPRELPTSDNLASELSGVTRWRDGLPRI 298 Query 289 VHAMATAAGNGAAA--EEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTG 346 VH +A AA G +E+DLLRVH+DTA H V+AQYP VDPALLLNCMLLAATE VTG Sbjct 299 VHLLAQAAAAGGGVGEDEIDLLRVHLDTARHAVVAQYPNVDPALLLNCMLLAATESGVTG 358 Query 347 DPIAANYHFAWFRELDS 363 DP++ANYHFAWFREL+ Sbjct 359 DPVSANYHFAWFRELNQ 375 >gi|15839405|ref|NP_334442.1| hypothetical protein MT0033 [Mycobacterium tuberculosis CDC1551] gi|13879076|gb|AAK44256.1| hypothetical protein MT0033 [Mycobacterium tuberculosis CDC1551] Length=150 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 149/150 (99%), Positives = 150/150 (100%), Gaps = 0/150 (0%) Query 216 VRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVEL 275 +RLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVEL Sbjct 1 MRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVEL 60 Query 276 GIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCM 335 GIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCM Sbjct 61 GIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCM 120 Query 336 LLAATERSVTGDPIAANYHFAWFRELDSRR 365 LLAATERSVTGDPIAANYHFAWFRELDSRR Sbjct 121 LLAATERSVTGDPIAANYHFAWFRELDSRR 150 >gi|254819079|ref|ZP_05224080.1| hypothetical protein MintA_04088 [Mycobacterium intracellulare ATCC 13950] Length=537 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 125/208 (61%), Positives = 147/208 (71%), Gaps = 2/208 (0%) Query 156 DWPVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEG 215 + PV D+ARL RLL FV RQEPRL+WA+G ADGTTVLVTD+AHGWIP GI+LP G Sbjct 323 EKPVTPTGFDKARLNRLLEFVVRQEPRLSWAIGDRADGTTVLVTDLAHGWIPSGISLPAG 382 Query 216 VRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVEL 275 VRLL P RR GR L+G T TY PGDSLRR+ D A SSV+PR LPAI L+ L Sbjct 383 VRLLEPGRRGGRVAALIGDTARVVTYAPGDSLRRSADFAATRSSVEPRQLPAIDDLARVL 442 Query 276 GIATQRHDGLPKIVH--AMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLN 333 AT+ H LPKIV A ATAAG +EVD+LRVH+DTA + +L QYP V+P LLL Sbjct 443 SQATRAHAELPKIVTRLADATAAGTFVVDQEVDVLRVHLDTARYQLLVQYPNVNPGLLLK 502 Query 334 CMLLAATERSVTGDPIAANYHFAWFREL 361 CML+AATE +GD ++ANYH AW+R L Sbjct 503 CMLMAATEGIASGDTVSANYHLAWYRML 530 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/110 (55%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Query 36 VIGGLWPAELSSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVI 95 + GGLWPAELS+ TAETATLAE+LKADL RI AND+L ++ RAGM + R+A E RVI Sbjct 1 MTGGLWPAELSTVTAETATLAEYLKADLQRIANGANDQLKMLKRAGMTEPARQAAEARVI 60 Query 96 DRARASAMRRVESAMRELRQI-TGRVPVEIPRMRGAGGSDLDTTRLMPAV 144 + AR AMRRVES +R L + +G P P G+DL+ T+++PAV Sbjct 61 EEARGRAMRRVESTIRYLHTVQSGAQPPAAPPALEGSGADLERTQVLPAV 110 >gi|342860243|ref|ZP_08716895.1| hypothetical protein MCOL_15240 [Mycobacterium colombiense CECT 3035] gi|342132621|gb|EGT85850.1| hypothetical protein MCOL_15240 [Mycobacterium colombiense CECT 3035] Length=483 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 121/206 (59%), Positives = 145/206 (71%), Gaps = 2/206 (0%) Query 158 PVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVR 217 P A D RL RLL FV RQEPR+NWA+G ADGTTVLVTD+AHGWIP GIALP GVR Sbjct 276 PTAPTGFDNERLNRLLEFVVRQEPRVNWAIGDRADGTTVLVTDLAHGWIPSGIALPAGVR 335 Query 218 LLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGI 277 LL P RR GR L+G T TYTPGDSL R+VD A SSV+PR+LP I L+ L Sbjct 336 LLEPERRTGRVAALIGETARAVTYTPGDSLHRSVDFAATRSSVEPRSLPPIDDLAAVLSA 395 Query 278 ATQRHDGLPKIVHAMATAAGNGAAA--EEVDLLRVHVDTALHHVLAQYPRVDPALLLNCM 335 AT+ LPKIV +A AA G +EVD+LRVH+DTA + +L QYP V+PALLL C+ Sbjct 396 ATRARADLPKIVPRLAEAAAAGTVVVDQEVDVLRVHLDTARYQLLVQYPNVNPALLLKCL 455 Query 336 LLAATERSVTGDPIAANYHFAWFREL 361 L+AATE +GD ++ANYH AW+++L Sbjct 456 LMAATEGIASGDAVSANYHLAWYQKL 481 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/107 (45%), Positives = 68/107 (64%), Gaps = 2/107 (1%) Query 49 TAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVES 108 T ET TLAE+LKADL RI +ANDEL ++ R+GM D +R+A E RVI+ AR A+RRVES Sbjct 2 TPETTTLAEYLKADLERIARAANDELKLLKRSGMTDLSRQAAEARVIEAARGRAVRRVES 61 Query 109 AMRELRQITG--RVPVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQA 153 +R L + + P P +DL+ T+++P + V+P +A Sbjct 62 TIRYLHAVQSGAQAPPAPPPRVEPADADLEKTQVLPVIRGVKPVTEA 108 >gi|118467122|ref|YP_879348.1| hypothetical protein MAV_0048 [Mycobacterium avium 104] gi|118168409|gb|ABK69306.1| conserved hypothetical protein [Mycobacterium avium 104] Length=562 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 118/199 (60%), Positives = 141/199 (71%), Gaps = 2/199 (1%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARR 224 D RL RLL FV RQEPRLNWA+G ADGTT+LVTD+AHGWIP GIALP GVRLL P RR Sbjct 357 DNNRLNRLLEFVVRQEPRLNWAIGDRADGTTILVTDLAHGWIPSGIALPAGVRLLEPERR 416 Query 225 AGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDG 284 +G L+G T TYTPGD+LRR+ D A SS QPR LP I L+ + A + G Sbjct 417 SGDVVALIGETVRRVTYTPGDTLRRSADFAATQSSSQPRELPPIDDLATAISRAIRGRAG 476 Query 285 LPKIVHAMATAAGNGAAA--EEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATER 342 LPKIV +A AA GA +EVD+LRVH+DTA + +L QYP V+PALLL C+L+A TE Sbjct 477 LPKIVPRLADAAAAGAVIVDQEVDVLRVHLDTARYQLLVQYPNVNPALLLKCLLMATTEG 536 Query 343 SVTGDPIAANYHFAWFREL 361 +GDP++ANYH AW+R L Sbjct 537 IASGDPVSANYHLAWYRTL 555 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/146 (60%), Positives = 106/146 (73%), Gaps = 2/146 (1%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGR +ARQRLRRATRESL+IP FSS +DCT V GGLWPAELS+ T ETATLAE+LK Sbjct 1 MAIFGRMTARQRLRRATRESLSIPAFSSPVDCTPWVTGGLWPAELSTVTPETATLAEYLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITG-- 118 ADL RI ANDEL + RAGM D+ R+A E RVI++AR A+RRVES +R L + Sbjct 61 ADLQRIADGANDELRKLKRAGMTDTARQAAEARVIEQARTRAVRRVESTIRYLHAVQSGA 120 Query 119 RVPVEIPRMRGAGGSDLDTTRLMPAV 144 R P A G+DL+ T+++PAV Sbjct 121 RPPAPPRPTLDAPGADLERTQVLPAV 146 >gi|41406139|ref|NP_958975.1| hypothetical protein MAP0041 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394487|gb|AAS02358.1| hypothetical protein MAP_0041 [Mycobacterium avium subsp. paratuberculosis K-10] Length=544 Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 127/238 (54%), Positives = 152/238 (64%), Gaps = 3/238 (1%) Query 126 RMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNW 185 R D T PAV + A Q + P D RL RLL FV RQEPRLNW Sbjct 301 RHHAPADRDEPATESRPAVADTETA-QPRVEKPAPTTAFDNNRLNRLLEFVVRQEPRLNW 359 Query 186 AVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGD 245 A+G ADGTT+LVTD+AHGWIP GIALP GVRLL P RR+G L+G T TYTPGD Sbjct 360 AIGDRADGTTILVTDLAHGWIPSGIALPAGVRLLEPERRSGDVVALIGETVRRVTYTPGD 419 Query 246 SLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAA--E 303 +LRR+ D A SS QPR LP I L+ + A + LPKIV +A AA GA + Sbjct 420 TLRRSADFAATQSSSQPRELPPIDDLATAISRAIRGRADLPKIVPRLADAAAAGAVIVDQ 479 Query 304 EVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFREL 361 EVD+LRVH+DTA + +L QYP V+PALLL C+L+AATE +GDP++ANYH AW+R L Sbjct 480 EVDVLRVHLDTARYQLLVQYPNVNPALLLKCLLMAATEGIASGDPVSANYHLAWYRTL 537 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/146 (60%), Positives = 106/146 (73%), Gaps = 2/146 (1%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGR +ARQRLRRATRESL+IP FSS +DCT V GGLWPAELS+ T ETATLAE+LK Sbjct 1 MAIFGRMTARQRLRRATRESLSIPAFSSPVDCTPWVTGGLWPAELSTVTPETATLAEYLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITG-- 118 ADL RI ANDEL + RAGM D+ R+A E RVI++AR A+RRVES +R L + Sbjct 61 ADLQRIADGANDELRKLKRAGMTDTARQAAEARVIEQARTRAVRRVESTIRYLHAVQSGA 120 Query 119 RVPVEIPRMRGAGGSDLDTTRLMPAV 144 R P A G+DL+ T+++PAV Sbjct 121 RPPAPPRPTLDAPGADLERTQVLPAV 146 >gi|336459444|gb|EGO38386.1| hypothetical protein MAPs_03840 [Mycobacterium avium subsp. paratuberculosis S397] Length=536 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 127/238 (54%), Positives = 152/238 (64%), Gaps = 3/238 (1%) Query 126 RMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNW 185 R D T PAV + A Q + P D RL RLL FV RQEPRLNW Sbjct 293 RHHAPADRDEPATESRPAVADTETA-QPRVEKPAPTTAFDNNRLNRLLEFVVRQEPRLNW 351 Query 186 AVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGD 245 A+G ADGTT+LVTD+AHGWIP GIALP GVRLL P RR+G L+G T TYTPGD Sbjct 352 AIGDRADGTTILVTDLAHGWIPSGIALPAGVRLLEPERRSGDVVALIGETVRRVTYTPGD 411 Query 246 SLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAA--E 303 +LRR+ D A SS QPR LP I L+ + A + LPKIV +A AA GA + Sbjct 412 TLRRSADFAATQSSSQPRELPPIDDLATAISRAIRGRADLPKIVPRLADAAAAGAVIVDQ 471 Query 304 EVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFREL 361 EVD+LRVH+DTA + +L QYP V+PALLL C+L+AATE +GDP++ANYH AW+R L Sbjct 472 EVDVLRVHLDTARYQLLVQYPNVNPALLLKCLLMAATEGIASGDPVSANYHLAWYRTL 529 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/146 (60%), Positives = 106/146 (73%), Gaps = 2/146 (1%) Query 1 VAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLK 60 +AIFGR +ARQRLRRATRESL+IP FSS +DCT V GGLWPAELS+ T ETATLAE+LK Sbjct 1 MAIFGRMTARQRLRRATRESLSIPAFSSPVDCTPWVTGGLWPAELSTVTPETATLAEYLK 60 Query 61 ADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITG-- 118 ADL RI ANDEL + RAGM D+ R+A E RVI++AR A+RRVES +R L + Sbjct 61 ADLQRIADGANDELRKLKRAGMTDTARQAAEARVIEQARTRAVRRVESTIRYLHAVQSGA 120 Query 119 RVPVEIPRMRGAGGSDLDTTRLMPAV 144 R P A G+DL+ T+++PAV Sbjct 121 RPPAPPRPTLDAPGADLERTQVLPAV 146 >gi|254773093|ref|ZP_05214609.1| hypothetical protein MaviaA2_00206 [Mycobacterium avium subsp. avium ATCC 25291] Length=202 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 115/195 (59%), Positives = 139/195 (72%), Gaps = 2/195 (1%) Query 169 LQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRA 228 + RLL FV RQEPRLNWA+G ADGTT+LVTD+AHGWIP GIALP GVRLL P RR+G Sbjct 1 MNRLLEFVVRQEPRLNWAIGDRADGTTILVTDLAHGWIPSGIALPAGVRLLEPERRSGDV 60 Query 229 PELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKI 288 L+G T TYTPGD+LRR+ D A SS QPR LP I L+ + A + LPKI Sbjct 61 VALIGETVRRVTYTPGDTLRRSADFAATQSSSQPRELPPIDDLATAISRAIRGRADLPKI 120 Query 289 VHAMATAAGNGAAA--EEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTG 346 V +A AA GA +EVD+LRVH+DTA + +L QYP V+PALLL C+L+AATE +G Sbjct 121 VPRLADAAAAGAVIVDQEVDVLRVHLDTARYQLLVQYPNVNPALLLKCLLMAATEGIASG 180 Query 347 DPIAANYHFAWFREL 361 DP++ANYH AW+R L Sbjct 181 DPVSANYHLAWYRTL 195 >gi|333988685|ref|YP_004521299.1| hypothetical protein JDM601_0045 [Mycobacterium sp. JDM601] gi|333484653|gb|AEF34045.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=496 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 113/203 (56%), Positives = 137/203 (68%), Gaps = 2/203 (0%) Query 163 EDDEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPA 222 E E RLQRLLAFVARQEP L WA+G ADG T+LVTDVA+GWIP GI +P GV LL P Sbjct 284 ESSEQRLQRLLAFVARQEPGLRWAIGTFADGRTLLVTDVANGWIPSGIEVPAGVHLLEPG 343 Query 223 RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRH 282 RR+G A ++G +Y+PGD L A D A +SVQPR L I L +L AT Sbjct 344 RRSGTATAMLGAPAESASYSPGDRLGWASDFGATDASVQPRELEPIDDLGWQLSEATHWR 403 Query 283 DGLPKIVHAMATA--AGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAAT 340 DGLP++ + +A A AG G EVDLLRVH+DT + +LAQYP D L+LNCMLLAAT Sbjct 404 DGLPRMANTLAKAGSAGTGVLDAEVDLLRVHLDTLRYQLLAQYPDTDLTLVLNCMLLAAT 463 Query 341 ERSVTGDPIAANYHFAWFRELDS 363 E TGD ++ANYH++WFR L + Sbjct 464 EGVATGDTVSANYHYSWFRALSA 486 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/71 (47%), Positives = 48/71 (68%), Gaps = 0/71 (0%) Query 45 LSSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMR 104 +++ T ETA LA++L ADL RI SAN++L I R+ + R+ E RVI+ ARA A+ Sbjct 1 MATITPETAPLADYLSADLQRIANSANEKLHAIGRSDLVGQARQTAEARVINVARAFAVL 60 Query 105 RVESAMRELRQ 115 RVES +R+L + Sbjct 61 RVESTVRQLHK 71 >gi|296167095|ref|ZP_06849505.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897537|gb|EFG77133.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=592 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 116/196 (60%), Positives = 137/196 (70%), Gaps = 2/196 (1%) Query 168 RLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGR 227 RL RLL FV RQE RLNWAVG DGTTVLVTD+AHGWIP GI LP GVRLL P +R GR Sbjct 390 RLNRLLEFVVRQESRLNWAVGDLPDGTTVLVTDLAHGWIPAGINLPAGVRLLEPEQRTGR 449 Query 228 APELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPK 287 L+ TY+PGDSLRR+VD TA SS++PR LP I L L T+R DGLP+ Sbjct 450 VSALIDGAARMVTYSPGDSLRRSVDFTATRSSLEPRELPPIGDLVRVLSETTRRFDGLPR 509 Query 288 IVHAMATAAGNGAAA--EEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVT 345 IV +A AA A +EVD+LRVH+DTA + +L QYP V PALLL CML+AATE + Sbjct 510 IVQRLADAAAADAMIIDQEVDVLRVHLDTARYQLLVQYPAVSPALLLKCMLMAATEGIAS 569 Query 346 GDPIAANYHFAWFREL 361 GD ++ANYH AW++ L Sbjct 570 GDRVSANYHLAWYQSL 585 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/144 (57%), Positives = 102/144 (71%), Gaps = 2/144 (1%) Query 8 SARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLKADLHRIV 67 +ARQRLRRATRESL +P FSS +DCT V+GG+WPAELS+ TAE ATLAE+LKADL RI Sbjct 2 TARQRLRRATRESLAMPAFSSPIDCTPWVLGGVWPAELSTITAENATLAEYLKADLQRIA 61 Query 68 GSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRM 127 AN++L +I RAG+AD R+AEE R+ID ARA A+RRVES +R+L PR Sbjct 62 DGANEQLKIIKRAGLADLPRQAEEARIIDEARACAVRRVESTIRQLHAELAGATAGYPRR 121 Query 128 RGAG--GSDLDTTRLMPAVTVVQP 149 + A + D TR++PAVT P Sbjct 122 QFAAPPSPEGDETRVIPAVTDAGP 145 >gi|254364895|ref|ZP_04980941.1| hypothetical protein TBHG_02040 [Mycobacterium tuberculosis str. Haarlem] gi|254551115|ref|ZP_05141562.1| hypothetical protein Mtube_11736 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289745358|ref|ZP_06504736.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] 12 more sequence titles Length=256 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 47 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 106 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 107 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 166 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 167 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 225 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 226 AAINALIAGDQSGANYHLAW 245 >gi|289554133|ref|ZP_06443343.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289438765|gb|EFD21258.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=315 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 106 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 165 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 166 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 225 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 226 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 284 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 285 AAINALIAGDQSGANYHLAW 304 >gi|148823298|ref|YP_001288052.1| hypothetical protein TBFG_12119 [Mycobacterium tuberculosis F11] gi|253798859|ref|YP_003031860.1| hypothetical protein TBMG_01899 [Mycobacterium tuberculosis KZN 1435] gi|308370910|ref|ZP_07667042.1| hypothetical protein TMCG_00179 [Mycobacterium tuberculosis SUMu003] gi|148721825|gb|ABR06450.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253320362|gb|ACT24965.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|308330449|gb|EFP19300.1| hypothetical protein TMCG_00179 [Mycobacterium tuberculosis SUMu003] gi|328458617|gb|AEB04040.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] gi|344219909|gb|AEN00540.1| hypothetical protein MTCTRI2_2121 [Mycobacterium tuberculosis CTRI-2] Length=721 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 512 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 571 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 572 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 631 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 632 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 690 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 691 AAINALIAGDQSGANYHLAW 710 >gi|326903697|gb|EGE50630.1| hypothetical protein TBPG_01577 [Mycobacterium tuberculosis W-148] gi|339295004|gb|AEJ47115.1| hypothetical protein CCDC5079_1925 [Mycobacterium tuberculosis CCDC5079] Length=721 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 512 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 571 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 572 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 631 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 632 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 690 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 691 AAINALIAGDQSGANYHLAW 710 >gi|121637967|ref|YP_978191.1| hypothetical protein BCG_2101 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990461|ref|YP_002645148.1| hypothetical protein JTY_2095 [Mycobacterium bovis BCG str. Tokyo 172] gi|121493615|emb|CAL72089.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773574|dbj|BAH26380.1| hypothetical protein JTY_2095 [Mycobacterium bovis BCG str. Tokyo 172] gi|341602005|emb|CCC64679.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=695 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 486 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 545 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 546 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 605 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 606 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 664 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 665 AAINALIAGDQSGANYHLAW 684 >gi|289762244|ref|ZP_06521622.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709750|gb|EFD73766.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=324 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 115 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 174 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 175 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 234 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 235 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 293 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 294 AAINALIAGDQSGANYHLAW 313 >gi|339632118|ref|YP_004723760.1| hypothetical protein MAF_20960 [Mycobacterium africanum GM041182] gi|339331474|emb|CCC27166.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=695 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 486 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 545 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 546 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 605 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 606 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 664 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 665 AAINALIAGDQSGANYHLAW 684 >gi|31793265|ref|NP_855758.1| hypothetical protein Mb2108 [Mycobacterium bovis AF2122/97] gi|31618857|emb|CAD96961.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=721 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 512 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 571 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 572 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 631 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 632 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 690 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 691 AAINALIAGDQSGANYHLAW 710 >gi|289758201|ref|ZP_06517579.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289713765|gb|EFD77777.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=324 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 115 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 174 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 175 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 234 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 235 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 293 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 294 AAINALIAGDQSGANYHLAW 313 >gi|298525582|ref|ZP_07012991.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495376|gb|EFI30670.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=721 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 512 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 571 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 572 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 631 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 632 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 690 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 691 AAINALIAGDQSGANYHLAW 710 >gi|289443588|ref|ZP_06433332.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289570195|ref|ZP_06450422.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289574763|ref|ZP_06454990.1| predicted protein [Mycobacterium tuberculosis K85] gi|289754193|ref|ZP_06513571.1| hypothetical protein TBGG_01309 [Mycobacterium tuberculosis EAS054] gi|289416507|gb|EFD13747.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289539194|gb|EFD43772.1| predicted protein [Mycobacterium tuberculosis K85] gi|289543949|gb|EFD47597.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289694780|gb|EFD62209.1| hypothetical protein TBGG_01309 [Mycobacterium tuberculosis EAS054] Length=721 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 512 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 571 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 572 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 631 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 632 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 690 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 691 AAINALIAGDQSGANYHLAW 710 >gi|15841575|ref|NP_336612.1| hypothetical protein MT2144 [Mycobacterium tuberculosis CDC1551] gi|13881823|gb|AAK46426.1| hypothetical protein MT2144 [Mycobacterium tuberculosis CDC1551] Length=719 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 510 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 569 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 570 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 629 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 630 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 688 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 689 AAINALIAGDQSGANYHLAW 708 >gi|308373321|ref|ZP_07431854.2| hypothetical protein TMEG_02449 [Mycobacterium tuberculosis SUMu005] gi|308338083|gb|EFP26934.1| hypothetical protein TMEG_02449 [Mycobacterium tuberculosis SUMu005] Length=314 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 109/200 (55%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 105 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 164 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 165 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 224 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 225 RHDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 283 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 284 AAINALIAGDQSGANYHLAW 303 >gi|15609219|ref|NP_216598.1| hypothetical protein Rv2082 [Mycobacterium tuberculosis H37Rv] gi|148661898|ref|YP_001283421.1| hypothetical protein MRA_2098 [Mycobacterium tuberculosis H37Ra] gi|308232024|ref|ZP_07663972.1| hypothetical protein TMAG_02266 [Mycobacterium tuberculosis SUMu001] 6 more sequence titles Length=721 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 512 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAP 571 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R P I L L + Sbjct 572 RRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIAPTIDELGPTLVETVR 631 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 RHD LP I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 632 RHDTLPPIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 690 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 691 AAINALIAGDQSGANYHLAW 710 >gi|254777636|ref|ZP_05219152.1| hypothetical protein MaviaA2_23606 [Mycobacterium avium subsp. avium ATCC 25291] Length=251 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 83/206 (41%), Positives = 108/206 (53%), Gaps = 6/206 (2%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPA-- 222 ++ RLQRL+ VARQEPRL+WA G+ DGTT LVTD+A GWIPP + LP V LL PA Sbjct 43 EQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPAHVTLLEPAAR 102 Query 223 RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQP--RALPAIAGLSVELGIATQ 280 R +L+G T + + S +P A P I L L A + Sbjct 103 RHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVR 162 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLA 338 R DGLP+I A+A A G E+ +LR H VL YP DPA + + MLLA Sbjct 163 RRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLA 222 Query 339 ATERSVTGDPIAANYHFAWFRELDSR 364 A + + G A+YH AWF+ ++ R Sbjct 223 AIQALIDGHEYLAHYHLAWFQAINHR 248 >gi|336459792|gb|EGO38706.1| hypothetical protein MAPs_46830 [Mycobacterium avium subsp. paratuberculosis S397] Length=282 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 83/206 (41%), Positives = 108/206 (53%), Gaps = 6/206 (2%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPA-- 222 ++ RLQRL+ VARQEPRL+WA G+ DGTT LVTD+A GWIPP + LP V LL PA Sbjct 74 EQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPAHVTLLEPAAR 133 Query 223 RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQP--RALPAIAGLSVELGIATQ 280 R +L+G T + + S +P A P I L L A + Sbjct 134 RHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVR 193 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLA 338 R DGLP+I A+A A G E+ +LR H VL YP DPA + + MLLA Sbjct 194 RRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLA 253 Query 339 ATERSVTGDPIAANYHFAWFRELDSR 364 A + + G A+YH AWF+ ++ R Sbjct 254 AIQALIDGHEYLAHYHLAWFQAINHR 279 >gi|254819417|ref|ZP_05224418.1| hypothetical protein MintA_05809 [Mycobacterium intracellulare ATCC 13950] Length=233 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 81/207 (40%), Positives = 108/207 (53%), Gaps = 7/207 (3%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADGTT-VLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RLQRL+ VARQEPRL+WA G+ DGTT +LVTD+A GWIPP + LP V LL P+ Sbjct 24 EQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPAHVSLLEPSA 83 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQP--RALPAIAGLSVELGIAT 279 R +L+G T + + S +P A P + L L A Sbjct 84 RRHDANVVDLLGAITVAAAHHANTYVAEPGSDEPALSGDRPARSAAPQVDELGPTLVEAV 143 Query 280 QRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLL 337 +R DGLP+I A+A A G E+++L V H V++ YP DPA + + MLL Sbjct 144 RRRDGLPRIAQAVAAPAVRKTGVLESEIEMLHECVADIQHSVMSAYPNHDPAAVGDWMLL 203 Query 338 AATERSVTGDPIAANYHFAWFRELDSR 364 AA E + G NYH AWF + R Sbjct 204 AAIEALIDGHEYLTNYHLAWFGAISHR 230 >gi|41410424|ref|NP_963260.1| hypothetical protein MAP4326c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399258|gb|AAS06876.1| hypothetical protein MAP_4326c [Mycobacterium avium subsp. paratuberculosis K-10] Length=719 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/206 (41%), Positives = 108/206 (53%), Gaps = 6/206 (2%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPA-- 222 ++ RLQRL+ VARQEPRL+WA G+ DGTT LVTD+A GWIPP + LP V LL PA Sbjct 511 EQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPAHVTLLEPAAR 570 Query 223 RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQP--RALPAIAGLSVELGIATQ 280 R +L+G T + + S +P A P I L L A + Sbjct 571 RHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVR 630 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLA 338 R DGLP+I A+A A G E+ +LR H VL YP DPA + + MLLA Sbjct 631 RRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLA 690 Query 339 ATERSVTGDPIAANYHFAWFRELDSR 364 A + + G A+YH AWF+ ++ R Sbjct 691 AIQALIDGHEYLAHYHLAWFQAINHR 716 >gi|342862328|ref|ZP_08718969.1| hypothetical protein MCOL_25678 [Mycobacterium colombiense CECT 3035] gi|342130185|gb|EGT83513.1| hypothetical protein MCOL_25678 [Mycobacterium colombiense CECT 3035] Length=233 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 85/213 (40%), Positives = 109/213 (52%), Gaps = 7/213 (3%) Query 159 VAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVR 217 V+A ++ RLQRL+ VARQEPRL+WA G+ DG TT+LVTD+A GWIPP + LP V Sbjct 18 VSARTAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPAHVS 77 Query 218 LLAPA--RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQP--RALPAIAGLSV 273 LL P+ R +L+G T + + S +P A P + L Sbjct 78 LLEPSARRHDANVVDLLGAITVAAAHHANTYVAEPGPDEPALSGDRPARSAAPPVDELGP 137 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L A +R DGLP+I A+A A G E +LR V VL YP DPA + Sbjct 138 TLVDAVRRRDGLPRIAQAVAAPAVRQTGVLESETAMLRECVAEIQDSVLTAYPNHDPAAV 197 Query 332 LNCMLLAATERSVTGDPIAANYHFAWFRELDSR 364 + MLLAA E + G ANYH AWF + R Sbjct 198 GDWMLLAAIEALIDGHEYLANYHLAWFDAVSHR 230 >gi|118465280|ref|YP_884399.1| hypothetical protein MAV_5288 [Mycobacterium avium 104] gi|118166567|gb|ABK67464.1| conserved hypothetical protein [Mycobacterium avium 104] Length=419 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/207 (41%), Positives = 109/207 (53%), Gaps = 7/207 (3%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RLQRL+ VARQEPRL+WA G+ DG TT+LVTD+A GWIPP + LP V LL PA Sbjct 210 EQQRLQRLVDAVARQEPRLSWAAGLRDDGITTLLVTDLASGWIPPHVRLPAHVTLLEPAA 269 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQP--RALPAIAGLSVELGIAT 279 R +L+G T + + S +P A P I L L A Sbjct 270 RRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAV 329 Query 280 QRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLL 337 +R DGLP+I A+A A G E+ +LR H VL YP DPA + + MLL Sbjct 330 RRRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLL 389 Query 338 AATERSVTGDPIAANYHFAWFRELDSR 364 AA + + G A+YH AWF+ ++ R Sbjct 390 AAIQALIDGHEYLAHYHLAWFQAINHR 416 >gi|340627094|ref|YP_004745546.1| hypothetical protein MCAN_21071 [Mycobacterium canettii CIPT 140010059] gi|340005284|emb|CCC44439.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=717 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 107/200 (54%), Gaps = 8/200 (4%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RL+R+L VARQEP L+WA G+ +G TT+LVTD+A GWIPP I LP + LL PA Sbjct 508 EQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLAGGWIPPHIRLPAHITLLEPAP 567 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRA-VDSTAPTSSVQPRALPAIAGLSVELGIATQ 280 RR +L+G TT + P L + D+ A T R I L L + Sbjct 568 RRRHATVTDLLGATTVAAAHHPHGYLSQPDPDTPALTGDRTARIAARIEELGPTLVETVR 627 Query 281 RHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHH-VLAQYPRVDPALLLNCMLL 337 R D LP+I A+ AA G E DLL H T +H VL YP D A +++ MLL Sbjct 628 RRDTLPRIAQAVVVAATRNYGVPDNETDLLH-HKTTEIHQAVLTTYPNHDIATVVDWMLL 686 Query 338 AATERSVTGDPIAANYHFAW 357 AA + GD ANYH AW Sbjct 687 AAINALIAGDQSGANYHLAW 706 >gi|296167167|ref|ZP_06849574.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897489|gb|EFG77088.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=720 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 84/203 (42%), Positives = 109/203 (54%), Gaps = 11/203 (5%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RLQRL+ VARQEPRL+WA G+ DG TT+LVTD+A GW+PP + LP V LL PA Sbjct 512 EQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLLVTDLAGGWMPPHVRLPAHVTLLEPAA 571 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGI---- 277 RR +L+G + + + D APT S R +A ELG Sbjct 572 RRRDANVVDLLGAVVVAAAHEHNTYVAES-DPEAPTLSGD-RPARTVASQVDELGPTLVE 629 Query 278 ATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCM 335 A +R DGLP+I A+A A G E +LL ++ VL+ YP D A + + M Sbjct 630 AVRRRDGLPRIAQAIAAPAVRKTGVLDSEAELLHKCMNDIQQSVLSLYPNHDVAAVGDWM 689 Query 336 LLAATERSVTGDPIAANYHFAWF 358 LLAA E + G ANYH AWF Sbjct 690 LLAAIEAVIEGHEYLANYHLAWF 712 >gi|240168379|ref|ZP_04747038.1| hypothetical protein MkanA1_03652 [Mycobacterium kansasii ATCC 12478] Length=232 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/201 (38%), Positives = 103/201 (52%), Gaps = 7/201 (3%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPA- 222 ++ RLQR++ VARQE RL+WA G+ DG TT+LVTD+A GWIPP + L V LL P Sbjct 18 EQQRLQRIVDAVARQESRLSWAAGLRDDGSTTLLVTDLAGGWIPPHVRLTANVTLLEPTA 77 Query 223 -RRAGRAPELVGITTCCKTYTPGDSLRR-AVDSTAPTSSVQPR-ALPAIAGLSVELGIAT 279 RR +L+G + P + D+ A T R A P + L L A Sbjct 78 RRRDASVVDLLGAVVTAAAHEPNAYVAEPGPDAPALTGDRAARSAAPKVDELGPTLVEAV 137 Query 280 QRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLL 337 +R DGLP+I A+A A G E +LR + VL YP D + + + ML+ Sbjct 138 RRRDGLPRIAQAIAAPAVRRTGVLENETKMLRDRIAAIQESVLDAYPNQDLSAVGDWMLM 197 Query 338 AATERSVTGDPIAANYHFAWF 358 AA + + G ANYH AW+ Sbjct 198 AAIDALIDGHEYLANYHMAWY 218 >gi|289760071|ref|ZP_06519449.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289715635|gb|EFD79647.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=319 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 104/207 (51%), Gaps = 7/207 (3%) Query 159 VAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVR 217 V+A ++ RLQR++ VARQEPR++WA G+ DG TT+LVTD+A GWIPP + LP V Sbjct 99 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 158 Query 218 LLAPA--RRAGRAPELVGITTCCKTYTPGDSLRR-AVDSTAPTSSVQPR-ALPAIAGLSV 273 LL P RR +L+G + + D+ A T R A+P + Sbjct 159 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 218 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L A +R D LP+I A+A A G E +LL + VL YP + + Sbjct 219 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 278 Query 332 LNCMLLAATERSVTGDPIAANYHFAWF 358 + MLLAA E + ANYH AW+ Sbjct 279 GDWMLLAAIEALIDEQDYLANYHLAWY 305 >gi|308371543|ref|ZP_07425271.2| hypothetical protein TMDG_01859 [Mycobacterium tuberculosis SUMu004] gi|308336351|gb|EFP25202.1| hypothetical protein TMDG_01859 [Mycobacterium tuberculosis SUMu004] Length=249 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 104/207 (51%), Gaps = 7/207 (3%) Query 159 VAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVR 217 V+A ++ RLQR++ VARQEPR++WA G+ DG TT+LVTD+A GWIPP + LP V Sbjct 29 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 88 Query 218 LLAPA--RRAGRAPELVGITTCCKTYTPGDSLRR-AVDSTAPTSSVQPR-ALPAIAGLSV 273 LL P RR +L+G + + D+ A T R A+P + Sbjct 89 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 148 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L A +R D LP+I A+A A G E +LL + VL YP + + Sbjct 149 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 208 Query 332 LNCMLLAATERSVTGDPIAANYHFAWF 358 + MLLAA E + ANYH AW+ Sbjct 209 GDWMLLAAIEALIDEQDYLANYHLAWY 235 >gi|308373859|ref|ZP_07433871.2| putative Tat (twin-arginine translocation) pathway signal sequence [Mycobacterium tuberculosis SUMu006] gi|308343864|gb|EFP32715.1| putative Tat (twin-arginine translocation) pathway signal sequence [Mycobacterium tuberculosis SUMu006] gi|339300297|gb|AEJ52407.1| hypothetical protein CCDC5180_3570 [Mycobacterium tuberculosis CCDC5180] Length=238 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 104/207 (51%), Gaps = 7/207 (3%) Query 159 VAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVR 217 V+A ++ RLQR++ VARQEPR++WA G+ DG TT+LVTD+A GWIPP + LP V Sbjct 18 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 77 Query 218 LLAPA--RRAGRAPELVGITTCCKTYTPGDSLRR-AVDSTAPTSSVQPR-ALPAIAGLSV 273 LL P RR +L+G + + D+ A T R A+P + Sbjct 78 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 137 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L A +R D LP+I A+A A G E +LL + VL YP + + Sbjct 138 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 197 Query 332 LNCMLLAATERSVTGDPIAANYHFAWF 358 + MLLAA E + ANYH AW+ Sbjct 198 GDWMLLAAIEALIDEQDYLANYHLAWY 224 >gi|289764092|ref|ZP_06523470.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711598|gb|EFD75614.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=257 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 104/207 (51%), Gaps = 7/207 (3%) Query 159 VAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVR 217 V+A ++ RLQR++ VARQEPR++WA G+ DG TT+LVTD+A GWIPP + LP V Sbjct 37 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 96 Query 218 LLAPA--RRAGRAPELVGITTCCKTYTPGDSLRR-AVDSTAPTSSVQPR-ALPAIAGLSV 273 LL P RR +L+G + + D+ A T R A+P + Sbjct 97 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 156 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L A +R D LP+I A+A A G E +LL + VL YP + + Sbjct 157 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 216 Query 332 LNCMLLAATERSVTGDPIAANYHFAWF 358 + MLLAA E + ANYH AW+ Sbjct 217 GDWMLLAAIEALIDEQDYLANYHLAWY 243 >gi|31795072|ref|NP_857565.1| hypothetical protein Mb3928c [Mycobacterium bovis AF2122/97] gi|121639810|ref|YP_980034.1| hypothetical protein BCG_3955c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992305|ref|YP_002646995.1| hypothetical protein JTY_3957 [Mycobacterium bovis BCG str. Tokyo 172] 10 more sequence titles Length=293 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 104/207 (51%), Gaps = 7/207 (3%) Query 159 VAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVR 217 V+A ++ RLQR++ VARQEPR++WA G+ DG TT+LVTD+A GWIPP + LP V Sbjct 73 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 132 Query 218 LLAPA--RRAGRAPELVGITTCCKTYTPGDSLRR-AVDSTAPTSSVQPR-ALPAIAGLSV 273 LL P RR +L+G + + D+ A T R A+P + Sbjct 133 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 192 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L A +R D LP+I A+A A G E +LL + VL YP + + Sbjct 193 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 252 Query 332 LNCMLLAATERSVTGDPIAANYHFAWF 358 + MLLAA E + ANYH AW+ Sbjct 253 GDWMLLAAIEALIDEQDYLANYHLAWY 279 >gi|183983065|ref|YP_001851356.1| hypothetical protein MMAR_3066 [Mycobacterium marinum M] gi|183176391|gb|ACC41501.1| conserved hypothetical protein [Mycobacterium marinum M] Length=718 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/206 (40%), Positives = 106/206 (52%), Gaps = 20/206 (9%) Query 165 DEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVRLLAPAR 223 ++ RL+R++ VARQEP L+WA G+ DG TT+LVTD+A GWIPP + LP V LL PA Sbjct 509 EQQRLRRIVDAVARQEPGLSWAAGLRDDGRTTLLVTDLAGGWIPPHVRLPSHVTLLEPAT 568 Query 224 RAGR--APELVGITTCCKTYTPG--------DSLRRAVDSTAPTSSVQPRALPAIAGLSV 273 R A +L+G T + P D+ + A D A R P I L Sbjct 569 RRSDIGAADLLGAVTISAVHQPHGYIGEPGRDAPKLAGDRAA-------RIAPEIDELGP 621 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L +R DGLP++ +A AA G E +LLR VLA YP D A Sbjct 622 TLAEHVRRRDGLPRVAQVVAVAAARNYGVPDNEAELLRDRASDIHRSVLAAYPHHDLAEA 681 Query 332 LNCMLLAATERSVTGDPIAANYHFAW 357 + MLLAA + + G+ AANYH AW Sbjct 682 TDWMLLAAIDALIDGNRTAANYHLAW 707 >gi|148825107|ref|YP_001289861.1| hypothetical protein TBFG_13934 [Mycobacterium tuberculosis F11] gi|148723634|gb|ABR08259.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] Length=364 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 104/207 (51%), Gaps = 7/207 (3%) Query 159 VAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADG-TTVLVTDVAHGWIPPGIALPEGVR 217 V+A ++ RLQR++ VARQEPR++WA G+ DG TT+LVTD+A GWIPP + LP V Sbjct 144 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 203 Query 218 LLAPA--RRAGRAPELVGITTCCKTYTPGDSLRR-AVDSTAPTSSVQPR-ALPAIAGLSV 273 LL P RR +L+G + + D+ A T R A+P + Sbjct 204 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 263 Query 274 ELGIATQRHDGLPKIVHAMATAA--GNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALL 331 L A +R D LP+I A+A A G E +LL + VL YP + + Sbjct 264 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 323 Query 332 LNCMLLAATERSVTGDPIAANYHFAWF 358 + MLLAA E + ANYH AW+ Sbjct 324 GDWMLLAAIEALIDEQDYLANYHLAWY 350 Lambda K H 0.320 0.132 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 688239003200 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40