BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0033
Length=87
Score E
Sequences producing significant alignments: (Bits) Value
gi|254233434|ref|ZP_04926760.1| acyl carrier protein acpA [Mycob... 177 4e-43
gi|146386420|pdb|2CGQ|A Chain A, A Putative Acyl Carrier Protein... 177 6e-43
gi|15607175|ref|NP_214547.1| acyl carrier protein AcpA [Mycobact... 177 7e-43
gi|306970212|ref|ZP_07482873.1| acyl carrier protein acpA [Mycob... 175 2e-42
gi|339630116|ref|YP_004721758.1| ACP [Mycobacterium africanum GM... 173 8e-42
gi|225374435|ref|ZP_03751656.1| hypothetical protein ROSEINA2194... 55.1 3e-06
gi|218290500|ref|ZP_03494620.1| acyl carrier protein [Alicycloba... 54.7 4e-06
gi|182417249|ref|ZP_02948602.1| acyl carrier protein [Clostridiu... 53.5 1e-05
gi|291563450|emb|CBL42266.1| acyl carrier protein [butyrate-prod... 53.1 1e-05
gi|148380413|ref|YP_001254954.1| acyl carrier protein [Clostridi... 52.8 2e-05
gi|153933265|ref|YP_001384631.1| acyl carrier protein [Clostridi... 52.8 2e-05
gi|218132443|ref|ZP_03461247.1| hypothetical protein BACPEC_0030... 52.8 2e-05
gi|291562860|emb|CBL41676.1| acyl carrier protein [butyrate-prod... 52.4 2e-05
gi|95929573|ref|ZP_01312315.1| acyl carrier protein [Desulfuromo... 52.4 2e-05
gi|300854468|ref|YP_003779452.1| putative acyl carrier protein [... 52.4 3e-05
gi|240146506|ref|ZP_04745107.1| acyl carrier protein [Roseburia ... 52.0 3e-05
gi|322382554|ref|ZP_08056434.1| acyl carrier-like protein [Paeni... 52.0 3e-05
gi|22095413|sp|Q8R9W1.2|ACP_THETN RecName: Full=Acyl carrier pro... 52.0 3e-05
gi|167037698|ref|YP_001665276.1| acyl carrier protein [Thermoana... 52.0 3e-05
gi|20807918|ref|NP_623089.1| Acyl carrier protein [Thermoanaerob... 51.6 3e-05
gi|289578476|ref|YP_003477103.1| acyl carrier protein [Thermoana... 51.6 4e-05
gi|253578970|ref|ZP_04856241.1| conserved hypothetical protein [... 51.2 5e-05
gi|331091058|ref|ZP_08339900.1| acyl carrier protein [Lachnospir... 51.2 5e-05
gi|255524267|ref|ZP_05391226.1| acyl carrier protein [Clostridiu... 51.2 5e-05
gi|323489553|ref|ZP_08094780.1| Acyl carrier protein (ACP) [Plan... 51.2 5e-05
gi|229918599|ref|YP_002887245.1| acyl carrier protein [Exiguobac... 51.2 6e-05
gi|187934375|ref|YP_001885437.1| acyl carrier protein [Clostridi... 50.8 6e-05
gi|225419777|ref|ZP_03762080.1| hypothetical protein CLOSTASPAR_... 50.8 6e-05
gi|226322327|ref|ZP_03797845.1| hypothetical protein COPCOM_0008... 50.8 7e-05
gi|297625005|ref|YP_003706439.1| acyl carrier protein [Truepera ... 50.8 7e-05
gi|302670934|ref|YP_003830894.1| ACP [Butyrivibrio proteoclastic... 50.8 7e-05
gi|172057916|ref|YP_001814376.1| acyl carrier protein [Exiguobac... 50.8 7e-05
gi|304316941|ref|YP_003852086.1| acyl carrier protein [Thermoana... 50.8 7e-05
gi|317129240|ref|YP_004095522.1| acyl carrier protein [Bacillus ... 50.8 7e-05
gi|302343814|ref|YP_003808343.1| acyl carrier protein [Desulfarc... 50.8 7e-05
gi|188590044|ref|YP_001920584.1| acyl carrier protein [Clostridi... 50.4 8e-05
gi|283797601|ref|ZP_06346754.1| acyl carrier protein [Clostridiu... 50.4 9e-05
gi|253578549|ref|ZP_04855821.1| conserved hypothetical protein [... 50.1 1e-04
gi|15896811|ref|NP_350160.1| acyl carrier protein [Clostridium a... 50.1 1e-04
gi|297584005|ref|YP_003699785.1| acyl carrier protein [Bacillus ... 50.1 1e-04
gi|289449995|ref|YP_003474959.1| acyl carrier protein [Clostridi... 50.1 1e-04
gi|251797478|ref|YP_003012209.1| acyl carrier protein [Paenibaci... 50.1 1e-04
gi|304404214|ref|ZP_07385876.1| acyl carrier protein [Paenibacil... 50.1 1e-04
gi|308068619|ref|YP_003870224.1| acyl carrier protein [Paenibaci... 49.7 1e-04
gi|253573484|ref|ZP_04850827.1| acyl carrier protein [Paenibacil... 49.7 2e-04
gi|225850064|ref|YP_002730298.1| acyl carrier protein [Persephon... 49.7 2e-04
gi|261408035|ref|YP_003244276.1| acyl carrier protein [Paenibaci... 49.7 2e-04
gi|319649605|ref|ZP_08003761.1| acyl carrier protein [Bacillus s... 49.7 2e-04
gi|291524529|emb|CBK90116.1| acyl carrier protein [Eubacterium r... 49.3 2e-04
gi|91202493|emb|CAJ72132.1| strongly similar to acyl carrier pro... 49.3 2e-04
>gi|254233434|ref|ZP_04926760.1| acyl carrier protein acpA [Mycobacterium tuberculosis C]
gi|124603227|gb|EAY61502.1| acyl carrier protein acpA [Mycobacterium tuberculosis C]
Length=143
Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/87 (100%), Positives = 87/87 (100%), Gaps = 0/87 (0%)
Query 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 60
MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK
Sbjct 57 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 116
Query 61 TVGDVYTSVAVWFPETAKPAPLGKGTA 87
TVGDVYTSVAVWFPETAKPAPLGKGTA
Sbjct 117 TVGDVYTSVAVWFPETAKPAPLGKGTA 143
>gi|146386420|pdb|2CGQ|A Chain A, A Putative Acyl Carrier Protein(Rv0033) From Mycobacterium
Tuberculosis
Length=113
Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/87 (99%), Positives = 87/87 (100%), Gaps = 0/87 (0%)
Query 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 60
M+EAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK
Sbjct 27 MEEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 86
Query 61 TVGDVYTSVAVWFPETAKPAPLGKGTA 87
TVGDVYTSVAVWFPETAKPAPLGKGTA
Sbjct 87 TVGDVYTSVAVWFPETAKPAPLGKGTA 113
>gi|15607175|ref|NP_214547.1| acyl carrier protein AcpA [Mycobacterium tuberculosis H37Rv]
gi|15839410|ref|NP_334447.1| acyl carrier protein [Mycobacterium tuberculosis CDC1551]
gi|31791210|ref|NP_853703.1| acyl carrier protein AcpA [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=87
Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/87 (100%), Positives = 87/87 (100%), Gaps = 0/87 (0%)
Query 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 60
MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK
Sbjct 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 60
Query 61 TVGDVYTSVAVWFPETAKPAPLGKGTA 87
TVGDVYTSVAVWFPETAKPAPLGKGTA
Sbjct 61 TVGDVYTSVAVWFPETAKPAPLGKGTA 87
>gi|306970212|ref|ZP_07482873.1| acyl carrier protein acpA [Mycobacterium tuberculosis SUMu009]
gi|308352329|gb|EFP41180.1| acyl carrier protein acpA [Mycobacterium tuberculosis SUMu009]
Length=87
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/87 (99%), Positives = 87/87 (100%), Gaps = 0/87 (0%)
Query 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 60
MKEAINATIQRILRTDRGITANQVLVDDLGFDS+KLFQLITELEDEFDIAISFRDAQNIK
Sbjct 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSVKLFQLITELEDEFDIAISFRDAQNIK 60
Query 61 TVGDVYTSVAVWFPETAKPAPLGKGTA 87
TVGDVYTSVAVWFPETAKPAPLGKGTA
Sbjct 61 TVGDVYTSVAVWFPETAKPAPLGKGTA 87
>gi|339630116|ref|YP_004721758.1| ACP [Mycobacterium africanum GM041182]
gi|339329472|emb|CCC25107.1| putative acyl carrier protein AcpA [Mycobacterium africanum GM041182]
Length=87
Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/87 (99%), Positives = 86/87 (99%), Gaps = 0/87 (0%)
Query 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 60
MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK
Sbjct 1 MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIK 60
Query 61 TVGDVYTSVAVWFPETAKPAPLGKGTA 87
TVGDVYTSVAVWFPETAKPA LGKGTA
Sbjct 61 TVGDVYTSVAVWFPETAKPALLGKGTA 87
>gi|225374435|ref|ZP_03751656.1| hypothetical protein ROSEINA2194_00050 [Roseburia inulinivorans
DSM 16841]
gi|225213673|gb|EEG96027.1| hypothetical protein ROSEINA2194_00050 [Roseburia inulinivorans
DSM 16841]
Length=77
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/68 (46%), Positives = 39/68 (58%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E + I +L D G IT VDDLG DSL +FQ+I LE+EFDI I +A+ I T
Sbjct 4 EKLKKIIAEVLNVDEGEITMETTFVDDLGADSLDVFQIIMGLEEEFDIEIPNEEAEKIVT 63
Query 62 VGDVYTSV 69
VGD +
Sbjct 64 VGDAVEQI 71
>gi|218290500|ref|ZP_03494620.1| acyl carrier protein [Alicyclobacillus acidocaldarius LAA1]
gi|258511327|ref|YP_003184761.1| acyl carrier protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|218239521|gb|EED06716.1| acyl carrier protein [Alicyclobacillus acidocaldarius LAA1]
gi|257478053|gb|ACV58372.1| acyl carrier protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|339289103|gb|AEJ43213.1| acyl carrier protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length=79
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 39/61 (64%), Gaps = 0/61 (0%)
Query 9 IQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTS 68
+ R+ + +T + DDLG DSL + +LI ELEDEFD+ IS DA+ I TVGDV T
Sbjct 14 VDRLNVDEDKVTLDATFKDDLGADSLDIVELIMELEDEFDMEISDEDAEKISTVGDVVTY 73
Query 69 V 69
+
Sbjct 74 I 74
>gi|182417249|ref|ZP_02948602.1| acyl carrier protein [Clostridium butyricum 5521]
gi|237667062|ref|ZP_04527046.1| acyl carrier protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378895|gb|EDT76408.1| acyl carrier protein [Clostridium butyricum 5521]
gi|237655410|gb|EEP52966.1| acyl carrier protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length=76
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/76 (44%), Positives = 39/76 (52%), Gaps = 1/76 (1%)
Query 1 MKEAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
M E I A I L D G +T +DDL DSL + +LI LEDE D+ I D +N
Sbjct 1 MFERIQAIIADKLSIDEGSVTMEASFIDDLNADSLDIVELIMALEDELDMEIPDEDVENF 60
Query 60 KTVGDVYTSVAVWFPE 75
KTVGDV V E
Sbjct 61 KTVGDVVNYVKAHHEE 76
>gi|291563450|emb|CBL42266.1| acyl carrier protein [butyrate-producing bacterium SS3/4]
Length=76
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 40/68 (59%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTD-RGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E + I +L D IT N VDDLG DSL +FQ+I +E+EFDI I +A+ I +
Sbjct 4 EKLQQIIAEVLNIDPEEITMNTTFVDDLGADSLDVFQIIMGIEEEFDIEIPTEEAEKIAS 63
Query 62 VGDVYTSV 69
VGD ++
Sbjct 64 VGDAVEAI 71
>gi|148380413|ref|YP_001254954.1| acyl carrier protein [Clostridium botulinum A str. ATCC 3502]
gi|148289897|emb|CAL84005.1| acyl carrier protein ACP [Clostridium botulinum A str. ATCC 3502]
Length=80
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (58%), Gaps = 1/64 (1%)
Query 3 EAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E I ATI L D IT +DDLG DSL + +LI LE EFD+ I DA+ I T
Sbjct 7 EKIKATIAEQLSIDEEEITMESSFIDDLGADSLDIVELIMALETEFDLEIPDEDAEKIST 66
Query 62 VGDV 65
VGDV
Sbjct 67 VGDV 70
>gi|153933265|ref|YP_001384631.1| acyl carrier protein [Clostridium botulinum A str. ATCC 19397]
gi|153937784|ref|YP_001388148.1| acyl carrier protein [Clostridium botulinum A str. Hall]
gi|153940786|ref|YP_001391754.1| acyl carrier protein [Clostridium botulinum F str. Langeland]
19 more sequence titles
Length=77
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (58%), Gaps = 1/64 (1%)
Query 3 EAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E I ATI L D IT +DDLG DSL + +LI LE EFD+ I DA+ I T
Sbjct 4 EKIKATIAEQLSIDEEEITMESSFIDDLGADSLDIVELIMALETEFDLEIPDEDAEKIST 63
Query 62 VGDV 65
VGDV
Sbjct 64 VGDV 67
>gi|218132443|ref|ZP_03461247.1| hypothetical protein BACPEC_00302 [Bacteroides pectinophilus
ATCC 43243]
gi|217992553|gb|EEC58555.1| hypothetical protein BACPEC_00302 [Bacteroides pectinophilus
ATCC 43243]
Length=76
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/68 (45%), Positives = 39/68 (58%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTD-RGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E + A I +L TD IT VDDLG DSL +FQ+I +E+ FDI I +A+ I T
Sbjct 4 EKLQAIIAEVLNTDPDSITMESTFVDDLGADSLDVFQIIMGIEEAFDIEIPTEEAEKIVT 63
Query 62 VGDVYTSV 69
VGD +
Sbjct 64 VGDAVEQI 71
>gi|291562860|emb|CBL41676.1| acyl carrier protein [butyrate-producing bacterium SS3/4]
Length=77
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/66 (47%), Positives = 37/66 (57%), Gaps = 1/66 (1%)
Query 1 MKEAINATIQRILRTDR-GITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
M E + I L TD IT DDLG DSL LF+L+ LEDE+ + I D QN+
Sbjct 1 MLEKMKEIIAEQLSTDADSITEATSFKDDLGADSLDLFELVMALEDEYSVEIPAEDLQNL 60
Query 60 KTVGDV 65
TVGDV
Sbjct 61 ATVGDV 66
>gi|95929573|ref|ZP_01312315.1| acyl carrier protein [Desulfuromonas acetoxidans DSM 684]
gi|95134270|gb|EAT15927.1| acyl carrier protein [Desulfuromonas acetoxidans DSM 684]
Length=77
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (41%), Positives = 43/72 (60%), Gaps = 5/72 (6%)
Query 4 AINATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQN 58
+I +Q+I+ G+ +QV +DDLG DSL +L+ LE+EFDI IS DA+
Sbjct 3 SIEERVQKIVAEQLGVEEDQVTPEASFMDDLGADSLDTVELVMALEEEFDIEISDEDAEK 62
Query 59 IKTVGDVYTSVA 70
I+TV D + V+
Sbjct 63 IQTVKDAISYVS 74
>gi|300854468|ref|YP_003779452.1| putative acyl carrier protein [Clostridium ljungdahlii DSM 13528]
gi|300434583|gb|ADK14350.1| putative acyl carrier protein [Clostridium ljungdahlii DSM 13528]
Length=77
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (41%), Positives = 42/72 (59%), Gaps = 5/72 (6%)
Query 9 IQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVG 63
IQ+I+ GI ++++ +DDLG DSL + +LI LE EFDI I +A+ +KTVG
Sbjct 6 IQKIISEQLGIGSDEIKMESSFIDDLGADSLDIVELIMALETEFDIEIPDEEAEKVKTVG 65
Query 64 DVYTSVAVWFPE 75
DV + E
Sbjct 66 DVVEYIKAHTEE 77
>gi|240146506|ref|ZP_04745107.1| acyl carrier protein [Roseburia intestinalis L1-82]
gi|257201363|gb|EEU99647.1| acyl carrier protein [Roseburia intestinalis L1-82]
gi|291535138|emb|CBL08250.1| acyl carrier protein [Roseburia intestinalis M50/1]
gi|291539666|emb|CBL12777.1| acyl carrier protein [Roseburia intestinalis XB6B4]
Length=76
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 40/68 (59%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E + I +L D IT + VDDLG DSL +FQ+I +E+EFDI I+ DA++I T
Sbjct 4 EKLKKIIAEVLNVDEEEITMDTTFVDDLGADSLDIFQIIMGIEEEFDIEIANEDAEHIVT 63
Query 62 VGDVYTSV 69
V D +
Sbjct 64 VADAVEQI 71
>gi|322382554|ref|ZP_08056434.1| acyl carrier-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153470|gb|EFX45875.1| acyl carrier-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length=80
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (48%), Positives = 37/57 (65%), Gaps = 0/57 (0%)
Query 9 IQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
I+R+ + +T DDLG DSL + +L+ ELEDEFD+ IS DA+ I TVG+V
Sbjct 16 IERLQVEESEVTPEASFKDDLGADSLDVVELVMELEDEFDLEISDEDAEKITTVGEV 72
>gi|22095413|sp|Q8R9W1.2|ACP_THETN RecName: Full=Acyl carrier protein; Short=ACP
Length=76
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/47 (58%), Positives = 32/47 (69%), Gaps = 0/47 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
IT +DDLG DSL + +LI LE+EFDI I DA+ IKTVGDV
Sbjct 21 ITMESSFIDDLGADSLDIVELIMALEEEFDIEIPDEDAEKIKTVGDV 67
>gi|167037698|ref|YP_001665276.1| acyl carrier protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167040359|ref|YP_001663344.1| acyl carrier protein [Thermoanaerobacter sp. X514]
gi|256750707|ref|ZP_05491592.1| acyl carrier protein [Thermoanaerobacter ethanolicus CCSD1]
15 more sequence titles
Length=75
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/47 (58%), Positives = 32/47 (69%), Gaps = 0/47 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
IT +DDLG DSL + +LI LE+EFDI I DA+ IKTVGDV
Sbjct 21 ITMESSFIDDLGADSLDIVELIMALEEEFDIEIPDEDAEKIKTVGDV 67
>gi|20807918|ref|NP_623089.1| Acyl carrier protein [Thermoanaerobacter tengcongensis MB4]
gi|20516486|gb|AAM24693.1| Acyl carrier protein [Thermoanaerobacter tengcongensis MB4]
Length=99
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/47 (58%), Positives = 32/47 (69%), Gaps = 0/47 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
IT +DDLG DSL + +LI LE+EFDI I DA+ IKTVGDV
Sbjct 44 ITMESSFIDDLGADSLDIVELIMALEEEFDIEIPDEDAEKIKTVGDV 90
>gi|289578476|ref|YP_003477103.1| acyl carrier protein [Thermoanaerobacter italicus Ab9]
gi|297544752|ref|YP_003677054.1| acyl carrier protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|289528189|gb|ADD02541.1| acyl carrier protein [Thermoanaerobacter italicus Ab9]
gi|296842527|gb|ADH61043.1| acyl carrier protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length=75
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/47 (58%), Positives = 32/47 (69%), Gaps = 0/47 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
IT +DDLG DSL + +LI LE+EFDI I DA+ IKTVGDV
Sbjct 21 ITMESSFIDDLGADSLDIVELIMALEEEFDIEIPDEDAEKIKTVGDV 67
>gi|253578970|ref|ZP_04856241.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849913|gb|EES77872.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length=77
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 40/68 (59%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTDR-GITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E I A I +L D IT + VDDLG DSL +FQ+I +E+E+DI + + I+T
Sbjct 6 EKIKAIIAEVLNIDADSITEDTTFVDDLGADSLDIFQIIMGIEEEYDIELDNESVEQIQT 65
Query 62 VGDVYTSV 69
VGD ++
Sbjct 66 VGDAVEAI 73
>gi|331091058|ref|ZP_08339900.1| acyl carrier protein [Lachnospiraceae bacterium 2_1_46FAA]
gi|330405280|gb|EGG84816.1| acyl carrier protein [Lachnospiraceae bacterium 2_1_46FAA]
Length=76
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/68 (45%), Positives = 39/68 (58%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTD-RGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E I A I+ +L IT + VDDLG DSL +FQ+I +E+ FDI I DA+ I T
Sbjct 4 EKIKAIIEDVLNVGPEEITMDTTFVDDLGADSLDIFQIIMGIEEAFDIEIENEDAEKIVT 63
Query 62 VGDVYTSV 69
VGD +
Sbjct 64 VGDAVEQI 71
>gi|255524267|ref|ZP_05391226.1| acyl carrier protein [Clostridium carboxidivorans P7]
gi|296185387|ref|ZP_06853797.1| acyl carrier protein [Clostridium carboxidivorans P7]
gi|255512092|gb|EET88373.1| acyl carrier protein [Clostridium carboxidivorans P7]
gi|296050221|gb|EFG89645.1| acyl carrier protein [Clostridium carboxidivorans P7]
Length=76
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/62 (47%), Positives = 38/62 (62%), Gaps = 5/62 (8%)
Query 9 IQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVG 63
IQ ++ GI+A +V +DDLG DSL + +LI LE EFD+ I DA+ I TVG
Sbjct 5 IQNLISEQLGISAEEVTMEASFIDDLGADSLDVVELIMALETEFDLEIPDEDAEKITTVG 64
Query 64 DV 65
DV
Sbjct 65 DV 66
>gi|323489553|ref|ZP_08094780.1| Acyl carrier protein (ACP) [Planococcus donghaensis MPA1U2]
gi|323396684|gb|EGA89503.1| Acyl carrier protein (ACP) [Planococcus donghaensis MPA1U2]
Length=77
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/42 (58%), Positives = 31/42 (74%), Gaps = 0/42 (0%)
Query 28 DLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSV 69
DLG DSL + +L+ ELEDEFD+ IS DA+N+ TVGD T +
Sbjct 32 DLGADSLDVVELVMELEDEFDMEISDEDAENMTTVGDAVTYI 73
>gi|229918599|ref|YP_002887245.1| acyl carrier protein [Exiguobacterium sp. AT1b]
gi|259710015|sp|C4L5Z4.1|ACP_EXISA RecName: Full=Acyl carrier protein; Short=ACP
gi|229470028|gb|ACQ71800.1| acyl carrier protein [Exiguobacterium sp. AT1b]
Length=79
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/47 (52%), Positives = 34/47 (73%), Gaps = 0/47 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
ITA + DDLG DSL++ +++ +LED+FDI I DA+ + TVGDV
Sbjct 25 ITAEKSFKDDLGADSLEVMEMVMDLEDKFDITIEDEDAEKLATVGDV 71
>gi|187934375|ref|YP_001885437.1| acyl carrier protein [Clostridium botulinum B str. Eklund 17B]
gi|187722528|gb|ACD23749.1| acyl carrier protein [Clostridium botulinum B str. Eklund 17B]
Length=76
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 39/76 (52%), Gaps = 1/76 (1%)
Query 1 MKEAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
M E I I L D G +T V+DL DSL + +LI LEDE D+ I D +N
Sbjct 1 MFEKIQNIIADKLSIDLGSVTMESSFVEDLNADSLDIVELIMALEDELDMEIPDEDVENF 60
Query 60 KTVGDVYTSVAVWFPE 75
KTVGDV V + E
Sbjct 61 KTVGDVVNYVKAHYDE 76
>gi|225419777|ref|ZP_03762080.1| hypothetical protein CLOSTASPAR_06115 [Clostridium asparagiforme
DSM 15981]
gi|225041581|gb|EEG51827.1| hypothetical protein CLOSTASPAR_06115 [Clostridium asparagiforme
DSM 15981]
Length=116
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 38/68 (56%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTD-RGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E + A I +L + +T VDDLG DSL +FQ+I +E+EFDI I A+ I T
Sbjct 44 EKLQAIIAEVLNIEPEEVTMQSTFVDDLGADSLDIFQIIMGIEEEFDIEIPNEAAEQIVT 103
Query 62 VGDVYTSV 69
VGD +
Sbjct 104 VGDAIEQI 111
>gi|226322327|ref|ZP_03797845.1| hypothetical protein COPCOM_00088 [Coprococcus comes ATCC 27758]
gi|225209249|gb|EEG91603.1| hypothetical protein COPCOM_00088 [Coprococcus comes ATCC 27758]
Length=76
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/51 (51%), Positives = 32/51 (63%), Gaps = 0/51 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSV 69
IT + VDDLG DSL +FQ+I +ED FDI I DA+ I TVGD +
Sbjct 21 ITMDTTFVDDLGADSLDIFQIIMGIEDAFDIEIENEDAEKIATVGDAVEQI 71
>gi|297625005|ref|YP_003706439.1| acyl carrier protein [Truepera radiovictrix DSM 17093]
gi|297166185|gb|ADI15896.1| acyl carrier protein [Truepera radiovictrix DSM 17093]
Length=79
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/52 (52%), Positives = 34/52 (66%), Gaps = 0/52 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVA 70
+T VDDLG DSL + +LI LEDEF I IS +A+ I+TVGD T +A
Sbjct 25 VTEEASFVDDLGADSLDVVELIMGLEDEFGIEISDEEAEKIRTVGDAVTFIA 76
>gi|302670934|ref|YP_003830894.1| ACP [Butyrivibrio proteoclasticus B316]
gi|302395407|gb|ADL34312.1| acyl carrier protein [Butyrivibrio proteoclasticus B316]
Length=78
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/63 (45%), Positives = 36/63 (58%), Gaps = 1/63 (1%)
Query 3 EAINATIQRILRTD-RGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E + I +L D IT + +DLG DSL LFQ+I LEDEFD+ I +NI T
Sbjct 4 EKMKEVIANVLNVDPEEITMDTTFTEDLGADSLDLFQIIMGLEDEFDVQIEPEKTENIST 63
Query 62 VGD 64
VG+
Sbjct 64 VGE 66
>gi|172057916|ref|YP_001814376.1| acyl carrier protein [Exiguobacterium sibiricum 255-15]
gi|226709408|sp|B1YIN3.1|ACP_EXIS2 RecName: Full=Acyl carrier protein; Short=ACP
gi|171990437|gb|ACB61359.1| acyl carrier protein [Exiguobacterium sibiricum 255-15]
Length=79
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/64 (40%), Positives = 42/64 (66%), Gaps = 0/64 (0%)
Query 6 NATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
A +++ + IT ++ DDLG DSL++ +L+ +LED+F+I I A+N+KTVGDV
Sbjct 12 EAIAEKLGKEQSEITLDKSFKDDLGADSLEVMELVMDLEDKFEITIEDDQAENLKTVGDV 71
Query 66 YTSV 69
+ +
Sbjct 72 VSYI 75
>gi|304316941|ref|YP_003852086.1| acyl carrier protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|333897190|ref|YP_004471064.1| acyl carrier protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|302778443|gb|ADL69002.1| acyl carrier protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|333112455|gb|AEF17392.1| acyl carrier protein [Thermoanaerobacterium xylanolyticum LX-11]
Length=76
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/47 (54%), Positives = 32/47 (69%), Gaps = 0/47 (0%)
Query 19 ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
+T +DDLG DSL + +LI LE+EFD+ I DA+ IKTVGDV
Sbjct 21 VTMESSFIDDLGADSLDIVELIMALEEEFDVEIPDEDAEKIKTVGDV 67
>gi|317129240|ref|YP_004095522.1| acyl carrier protein [Bacillus cellulosilyticus DSM 2522]
gi|315474188|gb|ADU30791.1| acyl carrier protein [Bacillus cellulosilyticus DSM 2522]
Length=77
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/67 (47%), Positives = 43/67 (65%), Gaps = 8/67 (11%)
Query 7 ATIQRILR--TDR-GITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQN 58
A I RI + +DR G+ +++ +DLG DSL + +L+ ELEDEFD+ IS DA+
Sbjct 3 AVIDRIAKIVSDRLGVDESEIKPEATFKEDLGADSLDVVELVMELEDEFDLEISDEDAEK 62
Query 59 IKTVGDV 65
I TVGDV
Sbjct 63 ISTVGDV 69
>gi|302343814|ref|YP_003808343.1| acyl carrier protein [Desulfarculus baarsii DSM 2075]
gi|301640427|gb|ADK85749.1| acyl carrier protein [Desulfarculus baarsii DSM 2075]
Length=78
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (36%), Positives = 42/71 (60%), Gaps = 0/71 (0%)
Query 2 KEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
K+ I +++ ++ + VDDLG DSL L ++I +E+ FDI+I+ DA+ IKT
Sbjct 6 KKVIQIICEQLSVSEEDVVPKASFVDDLGADSLDLVEMIMAMEEAFDISIADEDAEKIKT 65
Query 62 VGDVYTSVAVW 72
V D + +A +
Sbjct 66 VQDAFDYIAKY 76
>gi|188590044|ref|YP_001920584.1| acyl carrier protein [Clostridium botulinum E3 str. Alaska E43]
gi|251777638|ref|ZP_04820558.1| acyl carrier protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188500325|gb|ACD53461.1| acyl carrier protein [Clostridium botulinum E3 str. Alaska E43]
gi|243081953|gb|EES47843.1| acyl carrier protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length=76
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/76 (41%), Positives = 39/76 (52%), Gaps = 1/76 (1%)
Query 1 MKEAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
M E I I L D G +T ++DL DSL + +LI LEDE D+ I D +N
Sbjct 1 MFEKIQNIIADKLSIDLGSVTMESSFIEDLNADSLDIVELIMALEDELDMEIPDEDVENF 60
Query 60 KTVGDVYTSVAVWFPE 75
KTVGDV V + E
Sbjct 61 KTVGDVVNYVKAHYDE 76
>gi|283797601|ref|ZP_06346754.1| acyl carrier protein [Clostridium sp. M62/1]
gi|291074710|gb|EFE12074.1| acyl carrier protein [Clostridium sp. M62/1]
gi|295089948|emb|CBK76055.1| acyl carrier protein [Clostridium cf. saccharolyticum K10]
gi|295115051|emb|CBL35898.1| acyl carrier protein [butyrate-producing bacterium SM4/1]
Length=77
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/66 (46%), Positives = 36/66 (55%), Gaps = 1/66 (1%)
Query 1 MKEAINATIQRILRTDR-GITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
M E + I L D IT DDLG DSL LF+L+ LEDE+ + I D QN+
Sbjct 1 MLEKMKEIIAEQLSVDADSITEASSFKDDLGADSLDLFELVMALEDEYSVEIPAEDLQNL 60
Query 60 KTVGDV 65
TVGDV
Sbjct 61 LTVGDV 66
>gi|253578549|ref|ZP_04855821.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850867|gb|EES78825.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length=77
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/66 (46%), Positives = 38/66 (58%), Gaps = 1/66 (1%)
Query 1 MKEAINATIQRILRTDR-GITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
M E ++ I L D GITA DDLG DSL LF+L+ LEDE++I I D ++
Sbjct 1 MLEKMSEMIAEQLNCDAAGITAETSFKDDLGADSLDLFELVMALEDEYNIEIPAEDLTDL 60
Query 60 KTVGDV 65
TVG V
Sbjct 61 TTVGAV 66
>gi|15896811|ref|NP_350160.1| acyl carrier protein [Clostridium acetobutylicum ATCC 824]
gi|337738784|ref|YP_004638231.1| acyl carrier protein [Clostridium acetobutylicum DSM 1731]
gi|15026673|gb|AAK81500.1|AE007854_7 Acyl Carrier Protein, ACP [Clostridium acetobutylicum ATCC 824]
gi|325510985|gb|ADZ22621.1| Acyl Carrier Protein, ACP [Clostridium acetobutylicum EA 2018]
gi|336293223|gb|AEI34357.1| acyl carrier protein [Clostridium acetobutylicum DSM 1731]
Length=76
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (48%), Positives = 40/71 (57%), Gaps = 19/71 (26%)
Query 17 RGITANQVLVD------------DLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGD 64
R + ANQ+ VD DL DSL LFQ+I ELE++FDI I D +NIKTVGD
Sbjct 7 REVIANQISVDKETIDMATSFGKDLNVDSLDLFQIIIELEEKFDIQI--EDTENIKTVGD 64
Query 65 VYTSVAVWFPE 75
AV F E
Sbjct 65 -----AVKFIE 70
>gi|297584005|ref|YP_003699785.1| acyl carrier protein [Bacillus selenitireducens MLS10]
gi|297142462|gb|ADH99219.1| acyl carrier protein [Bacillus selenitireducens MLS10]
Length=77
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (41%), Positives = 41/66 (63%), Gaps = 5/66 (7%)
Query 5 INATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
++ I +I+ G+ ++V DDLG DSL + +L+ ELEDEF++ IS DA+ I
Sbjct 4 VHERIAKIVSERLGVDESEVKKEATFKDDLGADSLDVVELVMELEDEFELEISDEDAEKI 63
Query 60 KTVGDV 65
+VGDV
Sbjct 64 ASVGDV 69
>gi|289449995|ref|YP_003474959.1| acyl carrier protein [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184542|gb|ADC90967.1| acyl carrier protein [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length=79
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 41/68 (61%), Gaps = 5/68 (7%)
Query 2 KEAINATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDA 56
KE I T++ IL GI A ++ +DDL DSL + +L+ +E EF ++I +A
Sbjct 3 KEQILETVKSILVEQLGIDAEEIKPDSNFIDDLSADSLDIVELVMAMEQEFGVSIPDEEA 62
Query 57 QNIKTVGD 64
+NIKTVGD
Sbjct 63 ENIKTVGD 70
>gi|251797478|ref|YP_003012209.1| acyl carrier protein [Paenibacillus sp. JDR-2]
gi|247545104|gb|ACT02123.1| acyl carrier protein [Paenibacillus sp. JDR-2]
Length=77
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/39 (62%), Positives = 30/39 (77%), Gaps = 0/39 (0%)
Query 27 DDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
DDLG DSL + +L+ ELEDEFD+ IS DA+ I TVG+V
Sbjct 31 DDLGADSLDVVELVMELEDEFDLEISDEDAETITTVGEV 69
>gi|304404214|ref|ZP_07385876.1| acyl carrier protein [Paenibacillus curdlanolyticus YK9]
gi|304347192|gb|EFM13024.1| acyl carrier protein [Paenibacillus curdlanolyticus YK9]
Length=77
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/39 (62%), Positives = 30/39 (77%), Gaps = 0/39 (0%)
Query 27 DDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
DDLG DSL + +L+ ELEDEFD+ IS DA+ I TVG+V
Sbjct 31 DDLGADSLDVVELVMELEDEFDLEISDEDAEKITTVGEV 69
>gi|308068619|ref|YP_003870224.1| acyl carrier protein [Paenibacillus polymyxa E681]
gi|310641507|ref|YP_003946265.1| acyl carrier protein [Paenibacillus polymyxa SC2]
gi|305857898|gb|ADM69686.1| Acyl carrier protein (ACP) [Paenibacillus polymyxa E681]
gi|309246457|gb|ADO56024.1| Acyl carrier protein [Paenibacillus polymyxa SC2]
gi|343096576|emb|CCC84785.1| acyl carrier protein ACP [Paenibacillus polymyxa M1]
Length=77
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/39 (62%), Positives = 30/39 (77%), Gaps = 0/39 (0%)
Query 27 DDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
DDLG DSL + +L+ ELEDEFD+ IS DA+ I TVG+V
Sbjct 31 DDLGADSLDVVELVMELEDEFDMEISDEDAEKITTVGEV 69
>gi|253573484|ref|ZP_04850827.1| acyl carrier protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847012|gb|EES75017.1| acyl carrier protein [Paenibacillus sp. oral taxon 786 str. D14]
Length=77
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/39 (62%), Positives = 30/39 (77%), Gaps = 0/39 (0%)
Query 27 DDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
DDLG DSL + +L+ ELEDEFD+ IS DA+ I TVG+V
Sbjct 31 DDLGADSLDVVELVMELEDEFDLEISDEDAEKITTVGEV 69
>gi|225850064|ref|YP_002730298.1| acyl carrier protein [Persephonella marina EX-H1]
gi|254802121|sp|C0QUD3.1|ACP_PERMH RecName: Full=Acyl carrier protein; Short=ACP
gi|225645858|gb|ACO04044.1| acyl carrier protein [Persephonella marina EX-H1]
Length=76
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (56%), Gaps = 5/70 (7%)
Query 5 INATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNI 59
+ I+ I+ GI Q+ VDDLG DSL + +LI E+EFD+ I DA+ I
Sbjct 1 MEERIKEIIADQLGIDVEQIKPESKFVDDLGADSLDVVELIMAFEEEFDVEIPDEDAEKI 60
Query 60 KTVGDVYTSV 69
+TVGDV +
Sbjct 61 QTVGDVINYI 70
>gi|261408035|ref|YP_003244276.1| acyl carrier protein [Paenibacillus sp. Y412MC10]
gi|315648183|ref|ZP_07901284.1| acyl carrier protein [Paenibacillus vortex V453]
gi|329929605|ref|ZP_08283312.1| acyl carrier protein [Paenibacillus sp. HGF5]
gi|261284498|gb|ACX66469.1| acyl carrier protein [Paenibacillus sp. Y412MC10]
gi|315276829|gb|EFU40172.1| acyl carrier protein [Paenibacillus vortex V453]
gi|328936250|gb|EGG32702.1| acyl carrier protein [Paenibacillus sp. HGF5]
Length=77
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/57 (48%), Positives = 36/57 (64%), Gaps = 0/57 (0%)
Query 9 IQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDV 65
I R+ + +T DDLG DSL + +L+ ELEDEFD+ IS DA+ I TVG+V
Sbjct 13 IDRLGVDEADVTLEASFKDDLGADSLDVVELVMELEDEFDMEISDEDAEKITTVGEV 69
>gi|319649605|ref|ZP_08003761.1| acyl carrier protein [Bacillus sp. 2_A_57_CT2]
gi|317398767|gb|EFV79449.1| acyl carrier protein [Bacillus sp. 2_A_57_CT2]
Length=77
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (64%), Positives = 29/38 (77%), Gaps = 0/38 (0%)
Query 27 DDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGD 64
DDLG DSL + +L+ ELEDEFD+ IS DA+ I TVGD
Sbjct 31 DDLGADSLDVVELVMELEDEFDMEISDDDAEKIATVGD 68
>gi|291524529|emb|CBK90116.1| acyl carrier protein [Eubacterium rectale DSM 17629]
Length=78
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (40%), Positives = 38/68 (56%), Gaps = 1/68 (1%)
Query 3 EAINATIQRILRTDRG-ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKT 61
E + I +L D +T +DDLG DSL +FQ+I +E+EFDI I +A+ I T
Sbjct 4 EKLRDIIVEVLNVDENEVTMESTFIDDLGADSLDVFQIIMGIEEEFDIEIPNEEAEKIVT 63
Query 62 VGDVYTSV 69
VGD +
Sbjct 64 VGDAVEQI 71
>gi|91202493|emb|CAJ72132.1| strongly similar to acyl carrier protein AcpP [Candidatus Kuenenia
stuttgartiensis]
Length=77
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (38%), Positives = 43/80 (54%), Gaps = 10/80 (12%)
Query 4 AINATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQN 58
++ ++ I+ G+ A Q+ V+DLG DSL +LI E ED FD+ I DA+
Sbjct 3 SVGEKVREIITKQMGVKAEQITHETSFVNDLGADSLDTVELIMEFEDAFDMNIPDEDAEK 62
Query 59 IKTVGDVYTSVAVWFPETAK 78
I+TVGD AV + E K
Sbjct 63 IRTVGD-----AVKYIEEHK 77
Lambda K H
0.319 0.136 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130552747860
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40