BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0034
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607176|ref|NP_214548.1| hypothetical protein Rv0034 [Mycoba... 261 3e-68
gi|289572610|ref|ZP_06452837.1| conserved hypothetical protein [... 259 8e-68
gi|167970560|ref|ZP_02552837.1| hypothetical protein MtubH3_2200... 184 3e-45
gi|300790982|ref|YP_003771273.1| hypothetical protein AMED_9182 ... 92.4 2e-17
gi|297159135|gb|ADI08847.1| hypothetical protein SBI_05727 [Stre... 84.7 4e-15
gi|284989315|ref|YP_003407869.1| hypothetical protein Gobs_0728 ... 83.2 1e-14
gi|345008233|ref|YP_004810587.1| hypothetical protein Strvi_0530... 82.8 2e-14
gi|302543699|ref|ZP_07296041.1| conserved hypothetical protein [... 80.1 1e-13
gi|297195385|ref|ZP_06912783.1| conserved hypothetical protein [... 79.7 1e-13
gi|297199606|ref|ZP_06917003.1| conserved hypothetical protein [... 78.6 3e-13
gi|284990596|ref|YP_003409150.1| hypothetical protein Gobs_2092 ... 78.6 3e-13
gi|302534210|ref|ZP_07286552.1| conserved hypothetical protein [... 78.6 3e-13
gi|302551350|ref|ZP_07303692.1| conserved hypothetical protein [... 78.2 4e-13
gi|290958697|ref|YP_003489879.1| hypothetical protein SCAB_42621... 77.8 5e-13
gi|50513809|pdb|1TUH|A Chain A, Structure Of Bal32a From A Soil-... 77.8 5e-13
gi|13507483|gb|AAK28597.1|AF349098_1 hypothetical protein [uncul... 77.8 5e-13
gi|297190754|ref|ZP_06908152.1| conserved hypothetical protein [... 76.6 1e-12
gi|254382816|ref|ZP_04998172.1| conserved hypothetical protein [... 76.6 1e-12
gi|328883885|emb|CCA57124.1| hypothetical protein SVEN_3838 [Str... 76.3 2e-12
gi|323496218|ref|ZP_08101276.1| hypothetical protein VISI1226_11... 65.5 3e-09
gi|239815107|ref|YP_002944017.1| hypothetical protein Vapar_2116... 64.7 5e-09
gi|271970254|ref|YP_003344450.1| hypothetical protein Sros_9084 ... 62.4 2e-08
gi|312129194|ref|YP_003996534.1| hypothetical protein Lbys_0403 ... 62.0 3e-08
gi|304408203|ref|ZP_07389852.1| conserved hypothetical protein [... 60.1 1e-07
gi|260778267|ref|ZP_05887160.1| hypothetical protein VIC_003669 ... 59.3 2e-07
gi|284992031|ref|YP_003410585.1| hypothetical protein Gobs_3629 ... 58.5 3e-07
gi|21233357|ref|NP_639274.1| hypothetical protein XCC3934 [Xanth... 55.1 4e-06
gi|224036446|pdb|3G8Z|A Chain A, Crystal Structure Of Protein Of... 54.7 5e-06
gi|319795841|ref|YP_004157481.1| hypothetical protein Varpa_5214... 54.7 5e-06
gi|188993516|ref|YP_001905526.1| hypothetical protein xccb100_41... 54.7 5e-06
gi|297204838|ref|ZP_06922235.1| conserved hypothetical protein [... 54.3 7e-06
gi|290962943|ref|YP_003494125.1| hypothetical protein SCAB_86611... 53.9 7e-06
gi|171319862|ref|ZP_02908943.1| conserved hypothetical protein [... 53.1 1e-05
gi|326795386|ref|YP_004313206.1| hypothetical protein Marme_2126... 52.8 2e-05
gi|295700989|ref|YP_003608882.1| hypothetical protein BC1002_544... 52.4 2e-05
gi|344329100|gb|EGW40454.1| hypothetical protein DOT_1290 [Desul... 51.2 5e-05
gi|297204140|ref|ZP_06921537.1| conserved hypothetical protein [... 50.8 6e-05
gi|84495518|ref|ZP_00994637.1| hypothetical protein JNB_11969 [J... 50.4 9e-05
gi|326795376|ref|YP_004313196.1| hypothetical protein Marme_2116... 50.4 9e-05
gi|300787638|ref|YP_003767929.1| hypothetical protein AMED_5778 ... 50.4 1e-04
gi|229496738|ref|ZP_04390449.1| conserved hypothetical protein [... 50.1 1e-04
gi|290958808|ref|YP_003489990.1| hypothetical protein SCAB_43811... 49.7 1e-04
gi|312198869|ref|YP_004018930.1| hypothetical protein FraEuI1c_5... 49.3 2e-04
gi|284028365|ref|YP_003378296.1| hypothetical protein Kfla_0373 ... 48.9 3e-04
gi|108800324|ref|YP_640521.1| hypothetical protein Mmcs_3358 [My... 48.5 4e-04
gi|302533338|ref|ZP_07285680.1| conserved hypothetical protein [... 48.5 4e-04
gi|172062367|ref|YP_001810018.1| hypothetical protein BamMC406_3... 48.1 4e-04
gi|218660557|ref|ZP_03516487.1| hypothetical protein RetlI_13579... 47.8 6e-04
gi|34541122|ref|NP_905601.1| hypothetical protein PG1451 [Porphy... 47.4 6e-04
gi|271966957|ref|YP_003341153.1| ketosteroid isomerase-like prot... 47.4 8e-04
>gi|15607176|ref|NP_214548.1| hypothetical protein Rv0034 [Mycobacterium tuberculosis H37Rv]
gi|15839411|ref|NP_334448.1| hypothetical protein MT0039 [Mycobacterium tuberculosis CDC1551]
gi|31791211|ref|NP_853704.1| hypothetical protein Mb0035 [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=131
Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT
Sbjct 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY
Sbjct 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
Query 121 ADPAATESFWA 131
ADPAATESFWA
Sbjct 121 ADPAATESFWA 131
>gi|289572610|ref|ZP_06452837.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289537041|gb|EFD41619.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=131
Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/131 (99%), Positives = 130/131 (99%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
MTDDADLDLVRRTFAAFARGDLAELTQCF PDVEQFVPGKHALAGVFRGVDNVVACLGDT
Sbjct 1 MTDDADLDLVRRTFAAFARGDLAELTQCFGPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY
Sbjct 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
Query 121 ADPAATESFWA 131
ADPAATESFWA
Sbjct 121 ADPAATESFWA 131
>gi|167970560|ref|ZP_02552837.1| hypothetical protein MtubH3_22003 [Mycobacterium tuberculosis
H37Ra]
Length=116
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/94 (99%), Positives = 93/94 (99%), Gaps = 0/94 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT
Sbjct 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRA 94
AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASR
Sbjct 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRG 94
>gi|300790982|ref|YP_003771273.1| hypothetical protein AMED_9182 [Amycolatopsis mediterranei U32]
gi|299800496|gb|ADJ50871.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340532678|gb|AEK47883.1| hypothetical protein RAM_47090 [Amycolatopsis mediterranei S699]
Length=130
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/131 (34%), Positives = 76/131 (59%), Gaps = 1/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M + + L+RR + AF+ GD+A L++ APD Q +PG + +G +G D ++A G
Sbjct 1 MAEHQNATLIRRGYEAFSAGDVATLSELLAPDAVQHMPGHNVFSGDHKGRDAILAMYGQL 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
A + GT+ + LE+V +N D +V+ VY +R GK LD R A++ + G+ L++
Sbjct 61 AERSGGTLKIELEEVYAN-DEEVVTVYHSTGTRNGKQLDTRHALVFRMRDGKAAELTDVS 119
Query 121 ADPAATESFWA 131
+D ++FW+
Sbjct 120 SDETTDDNFWS 130
>gi|297159135|gb|ADI08847.1| hypothetical protein SBI_05727 [Streptomyces bingchenggensis
BCW-1]
Length=131
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/130 (33%), Positives = 70/130 (54%), Gaps = 0/130 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M + D L+RR + AF G++ L + DV VPG+ +++G +G + V
Sbjct 1 MGEHPDCALIRRGYEAFIGGNMDTLAELMTTDVTHHVPGESSISGHHKGREACVQLYRRQ 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
GT+ V LE + ++ G VI+V+R RA R + LD +E + T+ GG+I+ + E +
Sbjct 61 YDVTGGTLRVELETLAADGRGHVISVHRCRAEREDRGLDMKEGMFFTIVGGKISDIDECH 120
Query 121 ADPAATESFW 130
D A+ +FW
Sbjct 121 EDIDASNAFW 130
>gi|284989315|ref|YP_003407869.1| hypothetical protein Gobs_0728 [Geodermatophilus obscurus DSM
43160]
gi|284062560|gb|ADB73498.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=130
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/123 (35%), Positives = 69/123 (57%), Gaps = 1/123 (0%)
Query 9 LVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTM 68
++R +AA A GD+ L Q PD VPG++AL G ++G+D V+ G A+ DGT
Sbjct 8 MLRDLYAAAAEGDVERLRQLVHPDNVWHVPGRNALTGEYKGIDEVLGLFGRLASLTDGTF 67
Query 69 TVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAATES 128
L DV++ D V+ ++ RAG+ L+ R A++ V GR+ + E + D A ++
Sbjct 68 RSELHDVVAGED-HVVGLHVEHGERAGRSLNARLALIGHVREGRLVEVWEGHTDAEAYDA 126
Query 129 FWA 131
FW+
Sbjct 127 FWS 129
>gi|345008233|ref|YP_004810587.1| hypothetical protein Strvi_0530 [Streptomyces violaceusniger
Tu 4113]
gi|344034582|gb|AEM80307.1| hypothetical protein Strvi_0530 [Streptomyces violaceusniger
Tu 4113]
Length=132
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/131 (35%), Positives = 66/131 (51%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M + D LVRR AF++GDL ++ D +PG HA++G +G D +
Sbjct 1 MAEHPDRALVRRACTAFSQGDLDTVSTLMTADAVHHLPGDHAMSGHHKGRDACMDLYRSL 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
GT+ V LE VL + G ++V+ LRA R + LD + TV GG+IT + E
Sbjct 61 YEETGGTLRVDLETVLCDGRGHAMSVHHLRAERGNRGLDTKTGHFFTVVGGKITDIDECV 120
Query 121 ADPAATESFWA 131
D A ++FW
Sbjct 121 EDIDAWDAFWG 131
>gi|302543699|ref|ZP_07296041.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302461317|gb|EFL24410.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=134
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/131 (33%), Positives = 67/131 (52%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M + D +VRR AF +GDL L+ DV Q VPG + LAG +G D +
Sbjct 3 MGEHPDAAVVRRACTAFQQGDLDTLSTLVTADVVQHVPGDNMLAGHHKGRDACMQLWRTE 62
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
GT+ V ++ V+ + G VI+ +R RA R + +D + + T+ GG+I+ + +
Sbjct 63 YEETGGTLRVDIDSVMPDGRGHVISGHRCRAERGNRTMDMKTGLFFTIVGGKISDIDQCV 122
Query 121 ADPAATESFWA 131
D A ++FW
Sbjct 123 EDIDAADAFWG 133
>gi|297195385|ref|ZP_06912783.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152760|gb|EDY63153.2| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=153
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/130 (31%), Positives = 67/130 (52%), Gaps = 0/130 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M++ D LVRR + AFA GD+ L++ D VPG + L+G +G D ++
Sbjct 23 MSEHPDCALVRRGYTAFAAGDMNTLSELITADAVYHVPGDNILSGHHKGRDAILELFRRM 82
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
GTM + LE VL++ G V++ + RA R + ++ R+ + + GG++T + E
Sbjct 83 GEETAGTMQIQLEAVLADGRGHVMSFHTARADRGDRGIEIRQGLFFRIVGGKVTDIDECV 142
Query 121 ADPAATESFW 130
D +FW
Sbjct 143 EDIEEENTFW 152
>gi|297199606|ref|ZP_06917003.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197713466|gb|EDY57500.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=155
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/123 (32%), Positives = 62/123 (51%), Gaps = 0/123 (0%)
Query 9 LVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTM 68
L+R+ F AF+RGD+ L + A D VPG H L+G F+G D ++ G+M
Sbjct 32 LIRKGFEAFSRGDMDTLRELIAKDATHHVPGSHPLSGDFKGQDAIIDMYQKLGEETAGSM 91
Query 69 TVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAATES 128
+ + + + G + + R+ A R GK LD I+ + G ++T L E D ++
Sbjct 92 RLEMLGIAVDGRGHAVGMCRVTAERRGKHLDDTGCIVFRIVGDKVTDLDECLEDIDKSDE 151
Query 129 FWA 131
FWA
Sbjct 152 FWA 154
>gi|284990596|ref|YP_003409150.1| hypothetical protein Gobs_2092 [Geodermatophilus obscurus DSM
43160]
gi|284063841|gb|ADB74779.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=130
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/123 (35%), Positives = 68/123 (56%), Gaps = 1/123 (0%)
Query 9 LVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTM 68
++R ++A A D+ L Q P+V VPG++ L G ++G V+ G AA DGT
Sbjct 8 MLRDVYSAAAEADVERLRQLIHPEVVWHVPGRNVLTGDYKGFAEVLGLFGQLAAMTDGTF 67
Query 69 TVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAATES 128
L DV++N D V+ ++ R R+G L+ R A++ V GR++ + E + D A +S
Sbjct 68 QSELHDVVAN-DEHVVGLHTERGQRSGCSLEARLALVGHVRDGRLSEVWEGHLDAEAFDS 126
Query 129 FWA 131
FW+
Sbjct 127 FWS 129
>gi|302534210|ref|ZP_07286552.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302443105|gb|EFL14921.1| conserved hypothetical protein [Streptomyces sp. C]
Length=131
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/131 (30%), Positives = 69/131 (53%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M++ D L+RR + AF +GD+ L DV VPG + L+G +G + V+
Sbjct 1 MSEHPDCALIRRGYEAFGKGDMETLGTLMTADVIHHVPGNNRLSGHHKGREAVLDLYRRL 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
+GT+ V LE+V+ + G ++V+ + R + ++ E + T+ GG+IT + +
Sbjct 61 GEETNGTLRVRLENVMVDGRGHAMSVHLAQGDRGDRGIEIHEGLFFTIVGGKITDIDQCT 120
Query 121 ADPAATESFWA 131
D +++FWA
Sbjct 121 QDIDESDAFWA 131
>gi|302551350|ref|ZP_07303692.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
gi|302468968|gb|EFL32061.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
Length=154
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/123 (34%), Positives = 61/123 (50%), Gaps = 0/123 (0%)
Query 9 LVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTM 68
LVR+ F AF RGDL L + A D VPG H L+G F+G D ++ G+M
Sbjct 32 LVRKGFEAFTRGDLDTLRELIAKDATHHVPGSHPLSGDFKGQDAIIDMYRRIGEETAGSM 91
Query 69 TVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAATES 128
+ + + + G + + R+ A R GK LD I+ + G R+T L E D ++
Sbjct 92 RLDVLGIAVDGRGHAVGMCRVTAERKGKRLDDTGCIVFRIVGDRVTDLDECVEDIDKSDE 151
Query 129 FWA 131
FW+
Sbjct 152 FWS 154
>gi|290958697|ref|YP_003489879.1| hypothetical protein SCAB_42621 [Streptomyces scabiei 87.22]
gi|260648223|emb|CBG71331.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=131
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/131 (30%), Positives = 62/131 (48%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M + + LVR+ + AF RGDL L A D +PG H L+G +G D ++
Sbjct 1 MAEHPNATLVRKGYEAFTRGDLDTLRGLMASDCTHHIPGSHLLSGDHKGQDAIIGVYQRL 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
DGT V L + + G ++V+R A R G ++Q ++ + G +IT + E
Sbjct 61 FEETDGTFRVELSHICVDGRGHAVSVHRYTAERGGSRIEQNGCLVFRIVGDKITDIDECQ 120
Query 121 ADPAATESFWA 131
D +FW+
Sbjct 121 EDLDKEAAFWS 131
>gi|50513809|pdb|1TUH|A Chain A, Structure Of Bal32a From A Soil-Derived Mobile Gene
Cassette
Length=156
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/127 (34%), Positives = 62/127 (49%), Gaps = 0/127 (0%)
Query 4 DADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAA 63
+ + + VRR +AAF GD+ LT+ F + PG+ +AG +G + + A G
Sbjct 29 EQNAETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYGGE 88
Query 64 ADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADP 123
GT L VL + DG+VI ++R A R GK LD I+ GR+ E + D
Sbjct 89 TGGTFKAVLLHVLKSDDGRVIGIHRNTAERGGKRLDVGCCIVFEFKNGRVIDGREHFYDL 148
Query 124 AATESFW 130
A + FW
Sbjct 149 YAWDEFW 155
>gi|13507483|gb|AAK28597.1|AF349098_1 hypothetical protein [uncultured bacterium]
Length=149
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/127 (34%), Positives = 62/127 (49%), Gaps = 0/127 (0%)
Query 4 DADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAA 63
+ + + VRR +AAF GD+ LT+ F + PG+ +AG +G + + A G
Sbjct 22 EQNAETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYGGE 81
Query 64 ADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADP 123
GT L VL + DG+VI ++R A R GK LD I+ GR+ E + D
Sbjct 82 TGGTFKAVLLHVLKSDDGRVIGIHRNTAERGGKRLDVGCCIVFEFKNGRVIDGREHFYDL 141
Query 124 AATESFW 130
A + FW
Sbjct 142 YAWDEFW 148
>gi|297190754|ref|ZP_06908152.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197723044|gb|EDY66952.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=130
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/131 (33%), Positives = 63/131 (49%), Gaps = 1/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M D ++ + R AF+ GD+ L + F PDV + G L G + G + A
Sbjct 1 MADHPNIGVFHRALEAFSAGDMEALAEVFHPDVVWHIGGHGPLTGDYEGREAAFAMFQRE 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
GT L DVL+N D +A+ + ASR GK LD E I+ + GRIT +
Sbjct 61 FELTGGTYRPRLHDVLAN-DKHTVALLHVTASREGKELDMNETIVFHIRDGRITEAWGLW 119
Query 121 ADPAATESFWA 131
+D A ++FW+
Sbjct 120 SDQQAYDAFWS 130
>gi|254382816|ref|ZP_04998172.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194341717|gb|EDX22683.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=155
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/131 (31%), Positives = 68/131 (52%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M++ D LVRR + AF +GD+ +L DV VPG + L+G +G + V+
Sbjct 25 MSEHPDCALVRRCYEAFGQGDMEKLGSMMTADVIHHVPGNNPLSGHHKGREGVLDLYRRL 84
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
+GT V L VL + G V++ + + A R + ++ E + T+ GG+IT +
Sbjct 85 GEETNGTFRVELGPVLVDGRGHVMSFHTVYADRGDRGIEIGEGLFFTIVGGKITDIDGCI 144
Query 121 ADPAATESFWA 131
AD +++FW+
Sbjct 145 ADIDESDAFWS 155
>gi|328883885|emb|CCA57124.1| hypothetical protein SVEN_3838 [Streptomyces venezuelae ATCC
10712]
Length=134
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/131 (30%), Positives = 61/131 (47%), Gaps = 0/131 (0%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M D +V R + AFARGD+ L D PG ++G F+GV NV+
Sbjct 1 MAQHPDSIVVHRGYEAFARGDMETLGSLMVSDCTHHSPGSSQMSGHFKGVSNVLDHYKRL 60
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
GT V L+ V ++ G ++V+R R + ++ + + T+ GG+IT + E
Sbjct 61 MDLTHGTFRVELQGVYADGRGHAMSVHRWHGDRGNRGIEMQGGLFFTIVGGKITDIDECV 120
Query 121 ADPAATESFWA 131
D ++FW
Sbjct 121 EDIDEADAFWG 131
>gi|323496218|ref|ZP_08101276.1| hypothetical protein VISI1226_11716 [Vibrio sinaloensis DSM 21326]
gi|323318495|gb|EGA71448.1| hypothetical protein VISI1226_11716 [Vibrio sinaloensis DSM 21326]
Length=188
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/123 (31%), Positives = 60/123 (49%), Gaps = 4/123 (3%)
Query 7 LDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADG 66
L +V+ FAA+ GD+ L Q A DVE +PG+H LAG RG+D V A
Sbjct 63 LKVVQGFFAAYGAGDMETLKQYVAEDVEWHIPGRHKLAGTKRGIDEFVGFFNQLGKAGFK 122
Query 67 TMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAAT 126
+ +L+ D VI +R ++ G+ +D +L + G+I R+ F D +
Sbjct 123 AEVM----ILAANDTYVIDAHRGWSTAEGEQIDVNWVLLYQIKDGKIQRVQNFSGDLYRS 178
Query 127 ESF 129
++F
Sbjct 179 DAF 181
>gi|239815107|ref|YP_002944017.1| hypothetical protein Vapar_2116 [Variovorax paradoxus S110]
gi|239801684|gb|ACS18751.1| protein of unknown function DUF1486 [Variovorax paradoxus S110]
Length=129
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/127 (30%), Positives = 57/127 (45%), Gaps = 0/127 (0%)
Query 5 ADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAA 64
+ +D+ + A GD A L +PDV PGK+ +G RG+ V A LG +
Sbjct 2 SQIDIAKNYIHAAQSGDQALLASLISPDVVWHQPGKNRFSGTHRGMSAVGAMLGGMMEVS 61
Query 65 DGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPA 124
GT T++ D V +A R G LDQ L+ + G+I + F +D A
Sbjct 62 GGTFTISRADHFMENGSWVAINIEFKAERDGIQLDQAGVDLLRIENGQIVEVRLFSSDQA 121
Query 125 ATESFWA 131
++FW
Sbjct 122 LEDAFWG 128
>gi|271970254|ref|YP_003344450.1| hypothetical protein Sros_9084 [Streptosporangium roseum DSM
43021]
gi|270513429|gb|ACZ91707.1| conserved hypothetical protein [Streptosporangium roseum DSM
43021]
Length=131
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (30%), Positives = 65/131 (50%), Gaps = 2/131 (1%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELT-QCFAPDVEQFVPGKHALAGVFRGVDNVVACLGD 59
M++D + L R ++ A A+GDL + A +V VPG+ LAG +RG D V+ L
Sbjct 1 MSEDPKITLARDSYDALAKGDLDHVRDNLLADEVVFHVPGRGPLAGEYRGKDQVLGYLAK 60
Query 60 TAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEF 119
DG++ + ++ D V+ V R+ RAG+ LD R + + G+I+ +
Sbjct 61 FTEMTDGSVRFEPDSIIPGEDRTVVTV-RVHGERAGRQLDDRGVHVFRITDGKISERWSY 119
Query 120 YADPAATESFW 130
D ++F+
Sbjct 120 PQDLYNIDAFF 130
>gi|312129194|ref|YP_003996534.1| hypothetical protein Lbys_0403 [Leadbetterella byssophila DSM
17132]
gi|311905740|gb|ADQ16181.1| protein of unknown function DUF1486 [Leadbetterella byssophila
DSM 17132]
Length=134
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/127 (26%), Positives = 60/127 (48%), Gaps = 0/127 (0%)
Query 4 DADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAA 63
+ +L LV F A A+G+ ++ + + DV PG+ +G ++G + V LG+
Sbjct 2 EHNLALVSAYFEAVAQGNFPKVAELLSQDVIWHQPGQGVQSGTYQGQEKVFQHLGNLMKW 61
Query 64 ADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADP 123
++G+ ++ D L+ D V A +A + K L + L+ V G+IT + F
Sbjct 62 SEGSFSIDQIDYLTANDNLVTASIHFKAEKKDKTLSMKGIDLLKVENGKITEVWLFSEHI 121
Query 124 AATESFW 130
+ FW
Sbjct 122 EQEDQFW 128
>gi|304408203|ref|ZP_07389852.1| conserved hypothetical protein [Paenibacillus curdlanolyticus
YK9]
gi|304342891|gb|EFM08736.1| conserved hypothetical protein [Paenibacillus curdlanolyticus
YK9]
Length=145
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/129 (29%), Positives = 59/129 (46%), Gaps = 6/129 (4%)
Query 4 DADLDLVRRTFAAFARGDLAELTQ-CFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAA 62
+ +L+L+ R F + GDL + + A DV +PG H LAGV +G D ++ A
Sbjct 5 NKNLELISRFFECYGSGDLETMKRDILAEDVTWIIPGHHPLAGVKKGADEIIQYFATIAK 64
Query 63 AADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYAD 122
A ++ LS ++ V+ V+R +D ++ T+ GRI F AD
Sbjct 65 ANFKAEVIS----LSASEHNVVDVHRGWGEYGEYKVDMNWVLVYTIENGRIKSAQNFAAD 120
Query 123 P-AATESFW 130
A + FW
Sbjct 121 QHVADQFFW 129
>gi|260778267|ref|ZP_05887160.1| hypothetical protein VIC_003669 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606280|gb|EEX32565.1| hypothetical protein VIC_003669 [Vibrio coralliilyticus ATCC
BAA-450]
Length=158
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (29%), Positives = 61/123 (50%), Gaps = 4/123 (3%)
Query 7 LDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADG 66
L +V+ FAA+A+GDL + Q + +VE +PG+H+ AG RG+ G A
Sbjct 33 LKVVQGFFAAYAKGDLEGIKQYVSEEVEWHIPGRHSSAGTKRGITEFTEFFGKLGQAGFK 92
Query 67 TMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAAT 126
+ +L+ D VI +R ++ A + +D +L + G+I R+ F D +
Sbjct 93 AEVM----ILAANDTYVIDAHRGFSTAADENIDLNWILLYQIEDGKIKRVQNFSGDLYTS 148
Query 127 ESF 129
++F
Sbjct 149 DAF 151
>gi|284992031|ref|YP_003410585.1| hypothetical protein Gobs_3629 [Geodermatophilus obscurus DSM
43160]
gi|284065276|gb|ADB76214.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=141
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/121 (35%), Positives = 61/121 (51%), Gaps = 4/121 (3%)
Query 10 VRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMT 69
+R ++ AF RGDL L A DVE G++ L+GV RG D V LG +G++
Sbjct 20 LRHSYDAFLRGDLGPLDDLLAEDVEWHETGRNQLSGVHRGRDAVRELLGRLGQLTEGSLR 79
Query 70 VTLEDVLS-NTDGQVIAVYRLRASRAGKVL-DQREAILVTVAGGRITRLSEFYADPAATE 127
+ L VL+ +TDG +AV R A R + D EA + GR+T + D A +
Sbjct 80 LDLHTVLADDTDG--VAVVRTSARRGDRSFEDVLEAHIYRFRDGRVTEFRVTFDDQYAVD 137
Query 128 S 128
+
Sbjct 138 A 138
>gi|21233357|ref|NP_639274.1| hypothetical protein XCC3934 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66770320|ref|YP_245082.1| hypothetical protein XC_4023 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21115192|gb|AAM43156.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66575652|gb|AAY51062.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. 8004]
Length=129
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/125 (27%), Positives = 50/125 (40%), Gaps = 0/125 (0%)
Query 7 LDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADG 66
+D+ + A GD A L +PDV PG H +G RG+ V LG ++G
Sbjct 4 IDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSNG 63
Query 67 TMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAAT 126
T ++ D + V G L Q L+ + G+I + F AD
Sbjct 64 TFAISRADDYMASGDWVAITLEFSGQANGVTLKQAGVDLLRIEDGKIVEVRLFSADQTQE 123
Query 127 ESFWA 131
++FW
Sbjct 124 DAFWG 128
>gi|224036446|pdb|3G8Z|A Chain A, Crystal Structure Of Protein Of Unknown Function With
Cystatin-Like Fold (Np_639274.1) From Xanthomonas Campestris
At 1.90 A Resolution
Length=148
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/125 (27%), Positives = 49/125 (40%), Gaps = 0/125 (0%)
Query 7 LDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADG 66
+D+ + A GD A L +PDV PG H +G RG V LG ++G
Sbjct 23 IDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGXAVVGPXLGKXXEVSNG 82
Query 67 TMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAAT 126
T ++ D + V G L Q L+ + G+I + F AD
Sbjct 83 TFAISRADDYXASGDWVAITLEFSGQANGVTLKQAGVDLLRIEDGKIVEVRLFSADQTQE 142
Query 127 ESFWA 131
++FW
Sbjct 143 DAFWG 147
>gi|319795841|ref|YP_004157481.1| hypothetical protein Varpa_5214 [Variovorax paradoxus EPS]
gi|315598304|gb|ADU39370.1| protein of unknown function DUF1486 [Variovorax paradoxus EPS]
Length=141
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/126 (28%), Positives = 57/126 (46%), Gaps = 0/126 (0%)
Query 6 DLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAAD 65
+++LVR F A A+GD + + FA D+ PG +L+G RG + V A LG +
Sbjct 16 NIELVRSYFDAIAKGDFDAVGKIFADDIVWHQPGSGSLSGTHRGKEAVYALLGRFMERSG 75
Query 66 GTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAA 125
G+ + L +V A + G + ++ + GRI + F D AA
Sbjct 76 GSFRIDSVGPLMAQGDRVATPLHFCAEKPGASMAMSGVDVLRIDSGRICEVWLFSEDQAA 135
Query 126 TESFWA 131
++FW
Sbjct 136 EDAFWG 141
>gi|188993516|ref|YP_001905526.1| hypothetical protein xccb100_4121 [Xanthomonas campestris pv.
campestris str. B100]
gi|167735276|emb|CAP53490.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris]
gi|341935130|gb|AEL05269.1| conserved hypothetical protein [Xanthomonas campestris pv. raphani
756C]
Length=129
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/125 (27%), Positives = 50/125 (40%), Gaps = 0/125 (0%)
Query 7 LDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADG 66
+D+ + A GD A L +PDV PG H +G RG+ V LG ++G
Sbjct 4 IDIAKSYITAVQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSNG 63
Query 67 TMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAAT 126
T ++ D + V G L Q L+ + G+I + F AD
Sbjct 64 TFAISRADDYMASGDWVAITLEFSGQANGVTLKQAGVDLLRIEDGKIVEVRLFSADQTQE 123
Query 127 ESFWA 131
++FW
Sbjct 124 DAFWG 128
>gi|297204838|ref|ZP_06922235.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197712555|gb|EDY56589.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=136
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/125 (38%), Positives = 56/125 (45%), Gaps = 13/125 (10%)
Query 2 TDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVD----NVVACL 57
T A D+VRR + A A GDL L APDVE LAG +R D NV+ L
Sbjct 6 TSTAPADVVRRQYLASAAGDLEALRATLAPDVEWTEMAGFPLAGTYRAPDGVTANVMEQL 65
Query 58 G---DTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRIT 114
G D A D T V E+V+ V+A Y GK +D R A V GG I
Sbjct 66 GQDWDGWTAHDDTYVVDGENVV------VLARYTAVNKATGKAIDVRVAHHFVVRGGLIV 119
Query 115 RLSEF 119
R +F
Sbjct 120 RFEQF 124
>gi|290962943|ref|YP_003494125.1| hypothetical protein SCAB_86611 [Streptomyces scabiei 87.22]
gi|260652469|emb|CBG75602.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=140
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/125 (40%), Positives = 58/125 (47%), Gaps = 13/125 (10%)
Query 2 TDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFR---GV-DNVVACL 57
T A D+VRR + A A GDL L APDVE LAG +R GV NV+ L
Sbjct 10 TSTAPADVVRRQYLASAAGDLEALRATLAPDVEWTEMAGFPLAGTYRTPHGVTSNVMEEL 69
Query 58 G---DTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRIT 114
G D AA D T V E+V+ V+A Y GK +D R A V GG I
Sbjct 70 GKDWDGWAAHDDTYVVDGENVV------VLARYTATHKDTGKNIDARVAHHFIVRGGLIV 123
Query 115 RLSEF 119
R +F
Sbjct 124 RFEQF 128
>gi|171319862|ref|ZP_02908943.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
gi|171094889|gb|EDT39920.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
Length=134
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/123 (26%), Positives = 56/123 (46%), Gaps = 3/123 (2%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKH---ALAGVFRGVDNVVACL 57
M+ +++ LV+ +AAF+RGD+ + Q + +++ F+PG G RG+ V
Sbjct 1 MSGQSNVQLVQEAYAAFSRGDIGGVLQTLSENIDWFIPGPADVVPFVGRRRGLREVATFF 60
Query 58 GDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLS 117
A+A LE + S V+ R G+ + L T+ G+IT +
Sbjct 61 AALASAQTAERFEPLEFIASGNRVVVLGTQRWHVVSTGRTYEDDWVHLFTIESGKITTFA 120
Query 118 EFY 120
E++
Sbjct 121 EYH 123
>gi|326795386|ref|YP_004313206.1| hypothetical protein Marme_2126 [Marinomonas mediterranea MMB-1]
gi|326546150|gb|ADZ91370.1| protein of unknown function DUF1486 [Marinomonas mediterranea
MMB-1]
Length=129
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (27%), Positives = 56/127 (45%), Gaps = 2/127 (1%)
Query 6 DLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAAD 65
++D+ + A GD A L +PDV PG + +G+ RG+ V LG +
Sbjct 3 NIDIAKTYIKAVQFGDQATLGSIISPDVVWHQPGDNQFSGIHRGMAAVGPMLGKMMEVSK 62
Query 66 GTMTVTLED-VLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPA 124
GT +T D ++N D I V L Q L+ + GG+I + + ++ A
Sbjct 63 GTFAITRADHYMANGDWVAITV-EFSGEANDIKLKQPGVDLIRIEGGKIVEVWLYSSNQA 121
Query 125 ATESFWA 131
++FW
Sbjct 122 QEDAFWG 128
>gi|295700989|ref|YP_003608882.1| hypothetical protein BC1002_5443 [Burkholderia sp. CCGE1002]
gi|295440202|gb|ADG19371.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
Length=134
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (27%), Positives = 57/123 (47%), Gaps = 3/123 (2%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKH---ALAGVFRGVDNVVACL 57
M++ ++ LV++ + AF++ D+A + + A +V+ F+PG AG G V
Sbjct 1 MSEQQNVQLVQQAYDAFSKADIAGVLKTLADNVDWFIPGPTEVIPFAGRRHGPQGVAEFF 60
Query 58 GDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLS 117
AA L+ V S V+ V R R + G + A + T+ GRIT+
Sbjct 61 SVLAATQTAERFEPLDFVASEDKVVVLGVQRWRVNSTGITYEDEWAHVFTIENGRITKFK 120
Query 118 EFY 120
E++
Sbjct 121 EYH 123
>gi|344329100|gb|EGW40454.1| hypothetical protein DOT_1290 [Desulfosporosinus sp. OT]
Length=131
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/129 (21%), Positives = 58/129 (45%), Gaps = 3/129 (2%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDT 60
M + AD + ++ D + + PD+E +PG+ ++G +G A +
Sbjct 1 MGNIADKKIAENFLTSYKNHDWESIKKSLHPDIEWTLPGESKISGTAKGA---AAVIERV 57
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFY 120
+G + L +L G +++ +S G+VL++ A ++T+ G IT++ +
Sbjct 58 ETIVNGGVVTKLHHILVGQRGLTLSLNNTASSADGRVLNEELATVLTIQNGLITKIDTYL 117
Query 121 ADPAATESF 129
+D E +
Sbjct 118 SDVPMMERY 126
>gi|297204140|ref|ZP_06921537.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197714808|gb|EDY58842.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=136
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/125 (36%), Positives = 54/125 (44%), Gaps = 13/125 (10%)
Query 2 TDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACL---- 57
T A D+VRR + A A GDL L APDVE LAG +R D V + +
Sbjct 6 TSTAPADVVRRQYLASAAGDLKALRATLAPDVEWTEMAGFPLAGTYRTPDGVTSQVMERL 65
Query 58 ---GDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRIT 114
D A D T V E+V+ V+A Y GK +D R A V GG I
Sbjct 66 GKDWDGWTAHDDTYVVDGENVV------VLARYTAAHRATGKPIDVRVAHHFVVRGGLIV 119
Query 115 RLSEF 119
R +F
Sbjct 120 RFEQF 124
>gi|84495518|ref|ZP_00994637.1| hypothetical protein JNB_11969 [Janibacter sp. HTCC2649]
gi|84385011|gb|EAQ00891.1| hypothetical protein JNB_11969 [Janibacter sp. HTCC2649]
Length=137
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/119 (40%), Positives = 56/119 (48%), Gaps = 13/119 (10%)
Query 8 DLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFR---GV-DNVVACLG---DT 60
++VRR + A A GDL L APDVE LAG +R GV NV+ LG D
Sbjct 11 EVVRRQYLASAAGDLKALRATMAPDVEWTEMAGFPLAGTYRTPEGVTGNVMEKLGAEWDG 70
Query 61 AAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEF 119
AA D T V E+V+ V+A Y R GK L R A V GG I R +F
Sbjct 71 WAAHDDTYVVDGENVV------VLARYTARHRGTGKDLAVRVAHHFIVRGGLIVRFEQF 123
>gi|326795376|ref|YP_004313196.1| hypothetical protein Marme_2116 [Marinomonas mediterranea MMB-1]
gi|326546140|gb|ADZ91360.1| protein of unknown function DUF1486 [Marinomonas mediterranea
MMB-1]
Length=188
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/127 (26%), Positives = 57/127 (45%), Gaps = 2/127 (1%)
Query 6 DLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAAD 65
++D+ + A G+ A L +PDV PG + +G+ RG+ V LG +
Sbjct 62 NIDIAKTYIKAVQLGNQATLGSIISPDVVWHQPGDNQFSGIHRGMAAVGPMLGKMMEVSK 121
Query 66 GTMTVTLEDVLSNTDGQVIAVYRLRASRAGKV-LDQREAILVTVAGGRITRLSEFYADPA 124
GT +T D +G +A+ A A + L Q L+ + GG+I + + + A
Sbjct 122 GTFAITRADHYM-ANGDWVAITVEFAGEANDIKLKQPGVDLIRIEGGKIVEVWLYSRNQA 180
Query 125 ATESFWA 131
++FW
Sbjct 181 QEDAFWG 187
>gi|300787638|ref|YP_003767929.1| hypothetical protein AMED_5778 [Amycolatopsis mediterranei U32]
gi|299797152|gb|ADJ47527.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340529181|gb|AEK44386.1| hypothetical protein RAM_29555 [Amycolatopsis mediterranei S699]
Length=135
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/118 (36%), Positives = 54/118 (46%), Gaps = 13/118 (11%)
Query 9 LVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAA------ 62
+VRR + A A GDLA L + APDVE LAG +R + V + + + A
Sbjct 12 VVRRQYLASAAGDLAALRETLAPDVEWTEMAGFPLAGTYRTPEGVTSGVMEKLAQDWENW 71
Query 63 -AADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEF 119
A D T V EDV+ V+A Y G L+ R A TV GG I R +F
Sbjct 72 TAHDDTYVVDGEDVV------VLARYTATHRVTGNPLNVRVAHHFTVRGGLIVRFEQF 123
>gi|229496738|ref|ZP_04390449.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
35406]
gi|229316284|gb|EEN82206.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
35406]
Length=134
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (26%), Positives = 53/121 (44%), Gaps = 0/121 (0%)
Query 10 VRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMT 69
V + +AA A+GD + + D+ PGK AL+G++ G +V LG A ++GT
Sbjct 8 VSQFYAALAQGDFETVGALLSDDLVWHQPGKGALSGIYNGKQSVFTHLGKMAQLSNGTFA 67
Query 70 VTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAATESF 129
+ D ++ V+A S +G ++ + L G I + F + F
Sbjct 68 IDQVDYVTENGDLVVAAIGFAVSASGHSMEMKGVDLFRFENGLIKEVWLFSERIDEEDRF 127
Query 130 W 130
W
Sbjct 128 W 128
>gi|290958808|ref|YP_003489990.1| hypothetical protein SCAB_43811 [Streptomyces scabiei 87.22]
gi|260648334|emb|CBG71445.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=131
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/126 (26%), Positives = 50/126 (40%), Gaps = 0/126 (0%)
Query 6 DLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAAD 65
++D+ R F A GD+A L + + PG + +G +G V LG A+
Sbjct 5 NIDIARTYFQAVQTGDMAALGELLDEAIVWHQPGANQFSGEHKGQGAVFQMLGGMMEASQ 64
Query 66 GTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAA 125
GT + LS V A R + L+ + G+IT + F D A
Sbjct 65 GTFAIDKIHSLSGNGDLVAATIHFTGRRGDTSMAMDGVDLLRIQNGKITEMWLFSGDQNA 124
Query 126 TESFWA 131
++FW
Sbjct 125 EDAFWG 130
>gi|312198869|ref|YP_004018930.1| hypothetical protein FraEuI1c_5071 [Frankia sp. EuI1c]
gi|311230205|gb|ADP83060.1| hypothetical protein FraEuI1c_5071 [Frankia sp. EuI1c]
Length=130
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (31%), Positives = 62/118 (53%), Gaps = 4/118 (3%)
Query 6 DLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHA--LAGVFRGVDNVVACLGDTAAA 63
+ ++++ + AF+RGD+ +L FAPD+E P LAGV++G V + G AA
Sbjct 3 NTEIIKGGYEAFSRGDVVDLFARFAPDIEWTSPSGSPRDLAGVYKGHGEVQSFFGKVLAA 62
Query 64 ADGTMTVTLEDVLSNTDGQVIAVYRLRA-SRAGKVLDQREAILVTVAGGRITRLSEFY 120
M V + + + D +V+A L A S +G V+ +A G+ TR++E++
Sbjct 63 YGEHMAVRPLEFVESGD-RVVAFGLLEARSDSGHVVTLGFVHDWALADGKATRMTEYF 119
>gi|284028365|ref|YP_003378296.1| hypothetical protein Kfla_0373 [Kribbella flavida DSM 17836]
gi|283807658|gb|ADB29497.1| hypothetical protein Kfla_0373 [Kribbella flavida DSM 17836]
Length=171
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (36%), Positives = 42/88 (48%), Gaps = 11/88 (12%)
Query 3 DDADLDLVRRTFAAFARGDLAEL-TQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTA 61
+ ++ L+R + A+A GDLA L + FAP + +PG H LAG GV+ V+A A
Sbjct 33 EHPNVKLIRGYYEAYAAGDLAALRNRYFAPGIRWTIPGHHPLAGTKEGVEEVLAFFAQLA 92
Query 62 ----------AAADGTMTVTLEDVLSNT 79
AADG V L S T
Sbjct 93 RAGFRADPLFLAADGDWVVDLHRGWSTT 120
>gi|108800324|ref|YP_640521.1| hypothetical protein Mmcs_3358 [Mycobacterium sp. MCS]
gi|119869452|ref|YP_939404.1| hypothetical protein Mkms_3420 [Mycobacterium sp. KMS]
gi|126435947|ref|YP_001071638.1| hypothetical protein Mjls_3369 [Mycobacterium sp. JLS]
gi|108770743|gb|ABG09465.1| protein of unknown function DUF1486 [Mycobacterium sp. MCS]
gi|119695541|gb|ABL92614.1| protein of unknown function DUF1486 [Mycobacterium sp. KMS]
gi|126235747|gb|ABN99147.1| protein of unknown function DUF1486 [Mycobacterium sp. JLS]
Length=131
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (30%), Positives = 65/126 (52%), Gaps = 9/126 (7%)
Query 6 DLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAAD 65
+++ V++ + AF+ GD+ + F DVE PG+ A++G F G D + A LG A+
Sbjct 7 NIEAVKKGYEAFSSGDIETVMSLFDDDVEWVQPGRSAVSGTFHGKDEIRAYLG---KLAE 63
Query 66 GTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAA 125
+TV L ++ D V+A+ L + AG+ +A + T+ G+ R+ E + D A
Sbjct 64 KPLTVKLHRLIGEGD-TVVALTEL--TLAGE--HGTDADVFTLRDGKTVRV-EVHGDTAL 117
Query 126 TESFWA 131
E +
Sbjct 118 MERVYG 123
>gi|302533338|ref|ZP_07285680.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302442233|gb|EFL14049.1| conserved hypothetical protein [Streptomyces sp. C]
Length=151
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (36%), Positives = 33/67 (50%), Gaps = 0/67 (0%)
Query 14 FAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLE 73
+ A GD A + +A D+ VPG H LAG + G+D + +G T GT + LE
Sbjct 13 YRALGSGDRARILDYYAEDLRWLVPGNHPLAGWYEGLDAFLELMGRTHKLTGGTFRMDLE 72
Query 74 DVLSNTD 80
VL D
Sbjct 73 AVLVGED 79
>gi|172062367|ref|YP_001810018.1| hypothetical protein BamMC406_3334 [Burkholderia ambifaria MC40-6]
gi|171994884|gb|ACB65802.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6]
Length=134
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/123 (25%), Positives = 55/123 (45%), Gaps = 3/123 (2%)
Query 1 MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKH---ALAGVFRGVDNVVACL 57
M++ +++ LV+ +AAF RGD+ + Q + +++ F+PG G RG +V
Sbjct 1 MSEQSNVQLVQEAYAAFGRGDIGGVLQTLSENIDWFIPGPADVVPFVGRRRGPRDVATFF 60
Query 58 GDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLS 117
AA LE + S V+ R G+ + L T+ G+I + +
Sbjct 61 AALAATQTAERFEPLEFIASGKRVVVLGTQRWHVLSTGRTYEDDWVHLFTIESGKIAKFA 120
Query 118 EFY 120
E++
Sbjct 121 EYH 123
>gi|218660557|ref|ZP_03516487.1| hypothetical protein RetlI_13579 [Rhizobium etli IE4771]
Length=167
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/117 (30%), Positives = 55/117 (48%), Gaps = 5/117 (4%)
Query 14 FAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLE 73
+AA+A GD+ ++ FA D+ +PG H LAG RG V A G L
Sbjct 38 YAAYASGDMDKVASFFADDILWHIPGHHPLAGTKRGKQEVAAFFQQLGT---GNFRAELI 94
Query 74 DVLSNTDGQVIAVYRLRASRAGKV-LDQREAILVTVAGGRITRLSEFYADPAATESF 129
++++ + VI ++R ++R G +D + + G+I F D AA +SF
Sbjct 95 ALIAD-ENWVIDMHRGWSNRDGLANVDTVWVLAFKIENGKIKEARNFSFDQAAADSF 150
>gi|34541122|ref|NP_905601.1| hypothetical protein PG1451 [Porphyromonas gingivalis W83]
gi|288926493|ref|ZP_06420412.1| conserved hypothetical protein [Prevotella buccae D17]
gi|34397438|gb|AAQ66500.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
gi|288336705|gb|EFC75072.1| conserved hypothetical protein [Prevotella buccae D17]
Length=135
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (25%), Positives = 55/127 (44%), Gaps = 0/127 (0%)
Query 4 DADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAA 63
+ ++ VR+ + A A+GD + + D+ PG+ AL+G + G NV A L A
Sbjct 2 EKKIEKVRQFYTALAQGDFETVGALLSDDLVWHQPGQGALSGTYNGKQNVFAHLERMAQL 61
Query 64 ADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADP 123
++GT + D +++ V A S G ++ + L G I ++ F
Sbjct 62 SNGTFAIDQVDYVTDNGNLVAAAIAFAVSANGHSIEMKGVDLFNFENGFIKKVWLFSERI 121
Query 124 AATESFW 130
+ FW
Sbjct 122 EEEDRFW 128
>gi|271966957|ref|YP_003341153.1| ketosteroid isomerase-like protein [Streptosporangium roseum
DSM 43021]
gi|270510132|gb|ACZ88410.1| putative ketosteroid isomerase-related protein [Streptosporangium
roseum DSM 43021]
Length=142
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/119 (30%), Positives = 57/119 (48%), Gaps = 3/119 (2%)
Query 14 FAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLE 73
+AA RGDL + + APD VPG+ + G + G + VVA + + + GT+ + +
Sbjct 16 YAALDRGDLDAVRRTLAPDSVLHVPGRSSNTGDYEGREAVVAFVVNASVVTGGTLKLAVH 75
Query 74 DVLSNTDGQVIAVYRLRASRAGK--VLDQREAILVTVAGGRITRLSEFYADPAATESFW 130
VL++ D Q +A+ A R G L+ A ++T+ G I D + FW
Sbjct 76 RVLAD-DEQAVALATYTAPRPGTDVPLENNLAHVMTLRDGLIAESWLHSRDQYEVDEFW 133
Lambda K H
0.322 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131523520100
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40