BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0035

Length=562
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15839412|ref|NP_334449.1|  AMP-binding family protein [Mycobac...  1148    0.0   
gi|253796950|ref|YP_003029951.1|  fatty-acid-CoA ligase fadD34 [M...  1145    0.0   
gi|289747804|ref|ZP_06507182.1|  fatty-acid-CoA ligase fadD34 [My...  1144    0.0   
gi|289572611|ref|ZP_06452838.1|  fatty-acid-CoA ligase fadD34 [My...  1144    0.0   
gi|289760132|ref|ZP_06519510.1|  fatty-acid-CoA ligase [Mycobacte...  1144    0.0   
gi|306778856|ref|ZP_07417193.1|  fatty-acid-CoA ligase fadD34 [My...  1141    0.0   
gi|340625068|ref|YP_004743520.1|  putative fatty-acid-CoA ligase ...  1135    0.0   
gi|289567921|ref|ZP_06448148.1|  fatty-acid-CoA ligase fadD34 [My...   972    0.0   
gi|289748500|ref|ZP_06507878.1|  fatty-acid-CoA ligase fadD34 [My...   876    0.0   
gi|254548968|ref|ZP_05139415.1|  fatty-acid-CoA ligase fadD34 [My...   721    0.0   
gi|254548967|ref|ZP_05139414.1|  putative fatty-acid-CoA ligase [...   382    9e-104
gi|56478676|ref|YP_160265.1|  CoA ligase, AMP generating (three f...   236    8e-60 
gi|307726757|ref|YP_003909970.1|  AMP-dependent synthetase and li...   231    2e-58 
gi|297161053|gb|ADI10765.1|  acyl-CoA synthetase [Streptomyces bi...   224    4e-56 
gi|257095448|ref|YP_003169089.1|  AMP-dependent synthetase and li...   222    2e-55 
gi|295681464|ref|YP_003610038.1|  AMP-dependent synthetase and li...   219    7e-55 
gi|162455335|ref|YP_001617702.1|  acyl-CoA synthetase [Sorangium ...   219    9e-55 
gi|209515271|ref|ZP_03264138.1|  AMP-dependent synthetase and lig...   218    2e-54 
gi|335419445|ref|ZP_08550497.1|  AMP-dependent synthetase and lig...   216    8e-54 
gi|115378536|ref|ZP_01465692.1|  saframycin Mx1 synthetase B [Sti...   214    3e-53 
gi|215919292|ref|NP_820905.2|  acyl-CoA synthetase [Coxiella burn...   214    4e-53 
gi|161830319|ref|YP_001597743.1|  acyltransferase family protein ...   213    5e-53 
gi|296160928|ref|ZP_06843740.1|  AMP-dependent synthetase and lig...   212    2e-52 
gi|238024664|ref|YP_002908896.1|  Saframycin Mx1 synthetase [Burk...   211    3e-52 
gi|186471740|ref|YP_001863058.1|  AMP-dependent synthetase and li...   211    4e-52 
gi|300311697|ref|YP_003775789.1|  acyltransferase family protein ...   210    6e-52 
gi|162450802|ref|YP_001613169.1|  acyl-CoA synthetase [Sorangium ...   209    1e-51 
gi|91789248|ref|YP_550200.1|  AMP-dependent synthetase and ligase...   209    1e-51 
gi|209363707|ref|YP_001423619.2|  acyl-CoA synthetase [Coxiella b...   209    1e-51 
gi|212211705|ref|YP_002302641.1|  acyl-CoA synthetase [Coxiella b...   209    1e-51 
gi|212217721|ref|YP_002304508.1|  acyl-CoA synthetase [Coxiella b...   209    1e-51 
gi|165918760|ref|ZP_02218846.1|  acyltransferase family protein [...   209    1e-51 
gi|153206239|ref|ZP_01945502.1|  acyltransferase family protein [...   209    1e-51 
gi|288941226|ref|YP_003443466.1|  1-acyl-sn-glycerol-3-phosphate ...   209    2e-51 
gi|224824125|ref|ZP_03697233.1|  AMP-dependent synthetase and lig...   208    2e-51 
gi|344341519|ref|ZP_08772438.1|  AMP-dependent synthetase and lig...   207    4e-51 
gi|167567182|ref|ZP_02360098.1|  AMP-binding domain protein [Burk...   207    5e-51 
gi|89900929|ref|YP_523400.1|  AMP-dependent synthetase and ligase...   207    6e-51 
gi|121595383|ref|YP_987279.1|  AMP-dependent synthetase and ligas...   206    6e-51 
gi|167572594|ref|ZP_02365468.1|  AMP-binding domain protein [Burk...   206    1e-50 
gi|296170910|ref|ZP_06852447.1|  AMP-binding protein [Mycobacteri...   204    3e-50 
gi|71068219|gb|AAZ23074.1|  acyl-CoA ligase [Streptomyces fradiae]     204    3e-50 
gi|82701365|ref|YP_410931.1|  acyl-CoA synthetase [Nitrosospira m...   204    4e-50 
gi|52842442|ref|YP_096241.1|  saframycin Mx1 synthetase B [Legion...   204    4e-50 
gi|182678861|ref|YP_001833007.1|  AMP-dependent synthetase and li...   203    5e-50 
gi|296445080|ref|ZP_06887041.1|  AMP-dependent synthetase and lig...   202    1e-49 
gi|86740633|ref|YP_481033.1|  AMP-dependent synthetase and ligase...   201    2e-49 
gi|112791733|gb|ABI22131.1|  putative non-ribosomal peptide synth...   201    3e-49 
gi|54301694|ref|YP_131687.1|  acyltransferase family protein [Pho...   200    5e-49 
gi|320353995|ref|YP_004195334.1|  AMP-dependent synthetase and li...   200    5e-49 


>gi|15839412|ref|NP_334449.1| AMP-binding family protein [Mycobacterium tuberculosis CDC1551]
 gi|31791212|ref|NP_853705.1| fatty-acid-CoA ligase [Mycobacterium bovis AF2122/97]
 gi|57116683|ref|YP_177686.1| fatty-acid-CoA ligase [Mycobacterium tuberculosis H37Rv]
 33 more sequence titles
 Length=562

 Score = 1148 bits (2969),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 562/562 (100%), Positives = 562/562 (100%), Gaps = 0/562 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480
            DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS
Sbjct  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480

Query  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540
            IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT
Sbjct  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540

Query  541  HAWTADPDSAPKTTRSSLEGAH  562
            HAWTADPDSAPKTTRSSLEGAH
Sbjct  541  HAWTADPDSAPKTTRSSLEGAH  562


>gi|253796950|ref|YP_003029951.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis KZN 
1435]
 gi|289552284|ref|ZP_06441494.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis KZN 
605]
 gi|297632506|ref|ZP_06950286.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis KZN 
4207]
 6 more sequence titles
 Length=562

 Score = 1145 bits (2961),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/562 (99%), Positives = 561/562 (99%), Gaps = 0/562 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTL DDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLHDDAYVQYTSGS  180

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480
            DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS
Sbjct  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480

Query  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540
            IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT
Sbjct  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540

Query  541  HAWTADPDSAPKTTRSSLEGAH  562
            HAWTADPDSAPKTTRSSLEGAH
Sbjct  541  HAWTADPDSAPKTTRSSLEGAH  562


>gi|289747804|ref|ZP_06507182.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis 02_1987]
 gi|298527433|ref|ZP_07014842.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis 94_M4241A]
 gi|289688332|gb|EFD55820.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis 02_1987]
 gi|298497227|gb|EFI32521.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis 94_M4241A]
Length=562

 Score = 1144 bits (2960),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/562 (99%), Positives = 561/562 (99%), Gaps = 0/562 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQI ACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQIWACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480
            DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS
Sbjct  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480

Query  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540
            IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT
Sbjct  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540

Query  541  HAWTADPDSAPKTTRSSLEGAH  562
            HAWTADPDSAPKTTRSSLEGAH
Sbjct  541  HAWTADPDSAPKTTRSSLEGAH  562


>gi|289572611|ref|ZP_06452838.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis K85]
 gi|289537042|gb|EFD41620.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis K85]
Length=562

 Score = 1144 bits (2959),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/562 (99%), Positives = 561/562 (99%), Gaps = 0/562 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLR LDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRCLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480
            DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS
Sbjct  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480

Query  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540
            IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT
Sbjct  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540

Query  541  HAWTADPDSAPKTTRSSLEGAH  562
            HAWTADPDSAPKTTRSSLEGAH
Sbjct  541  HAWTADPDSAPKTTRSSLEGAH  562


>gi|289760132|ref|ZP_06519510.1| fatty-acid-CoA ligase [Mycobacterium tuberculosis T85]
 gi|294995649|ref|ZP_06801340.1| putative fatty-acid-CoA ligase [Mycobacterium tuberculosis 210]
 gi|289715696|gb|EFD79708.1| fatty-acid-CoA ligase [Mycobacterium tuberculosis T85]
 gi|326905796|gb|EGE52729.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis W-148]
 gi|339293112|gb|AEJ45223.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis CCDC5079]
 gi|339296760|gb|AEJ48870.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis CCDC5180]
Length=562

 Score = 1144 bits (2958),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 560/562 (99%), Positives = 561/562 (99%), Gaps = 0/562 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQI ACTDRTLTI+CEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQIWACTDRTLTISCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480
            DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS
Sbjct  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480

Query  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540
            IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT
Sbjct  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540

Query  541  HAWTADPDSAPKTTRSSLEGAH  562
            HAWTADPDSAPKTTRSSLEGAH
Sbjct  541  HAWTADPDSAPKTTRSSLEGAH  562


>gi|306778856|ref|ZP_07417193.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis SUMu002]
 gi|306782646|ref|ZP_07420968.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis SUMu003]
 gi|306787012|ref|ZP_07425334.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=569

 Score = 1141 bits (2951),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 562/569 (99%), Positives = 562/569 (99%), Gaps = 7/569 (1%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPL-------LRHHRVL  113
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPL       LRHHRVL
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLMTRLGPLLRHHRVL  120

Query  114  ICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAY  173
            ICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAY
Sbjct  121  ICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAY  180

Query  174  VQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAAL  233
            VQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAAL
Sbjct  181  VQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAAL  240

Query  234  FNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLH  293
            FNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLH
Sbjct  241  FNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLH  300

Query  294  KMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTET  353
            KMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTET
Sbjct  301  KMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTET  360

Query  354  HAAAEVVTGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDT  413
            HAAAEVVTGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDT
Sbjct  361  HAAAEVVTGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDT  420

Query  414  HDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVV  473
            HDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVV
Sbjct  421  HDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVV  480

Query  474  LESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDG  533
            LESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDG
Sbjct  481  LESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDG  540

Query  534  TLPRLATHAWTADPDSAPKTTRSSLEGAH  562
            TLPRLATHAWTADPDSAPKTTRSSLEGAH
Sbjct  541  TLPRLATHAWTADPDSAPKTTRSSLEGAH  569


>gi|340625068|ref|YP_004743520.1| putative fatty-acid-CoA ligase FADD34 [Mycobacterium canettii 
CIPT 140010059]
 gi|340003258|emb|CCC42375.1| putative fatty-acid-CoA ligase FADD34 (fatty-acid-CoA synthetase) 
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT 
140010059]
Length=562

 Score = 1135 bits (2935),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 557/562 (99%), Positives = 559/562 (99%), Gaps = 0/562 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCE SEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQISACTDRTLTITCEHSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDS  480
            DDEIVILGRQDEVFIV+GENRFPYDIEFIIR ESEQHRTKVACFGVNERVVVVLES LDS
Sbjct  421  DDEIVILGRQDEVFIVYGENRFPYDIEFIIRRESEQHRTKVACFGVNERVVVVLESQLDS  480

Query  481  IIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540
            IID+AEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT
Sbjct  481  IIDEAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540

Query  541  HAWTADPDSAPKTTRSSLEGAH  562
            HAWTADPDSAPKTTRSSLEGAH
Sbjct  541  HAWTADPDSAPKTTRSSLEGAH  562


>gi|289567921|ref|ZP_06448148.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis T17]
 gi|289541674|gb|EFD45323.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis T17]
Length=475

 Score =  972 bits (2512),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 473/473 (100%), Positives = 473/473 (100%), Gaps = 0/473 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  3    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  62

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  63   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  122

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  123  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  182

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  183  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  242

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  243  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  302

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  303  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  362

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  363  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  422

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVV  473
            DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVV
Sbjct  423  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNERVVVV  475


>gi|289748500|ref|ZP_06507878.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis T92]
 gi|289689087|gb|EFD56516.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis T92]
Length=503

 Score =  876 bits (2264),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 430/430 (100%), Positives = 430/430 (100%), Gaps = 0/430 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180

Query  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240
            TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV
Sbjct  181  TAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAV  240

Query  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300
            FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII
Sbjct  241  FTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLII  300

Query  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360
            ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV
Sbjct  301  ASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV  360

Query  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV
Sbjct  361  TGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420

Query  421  DDEIVILGRQ  430
            DDEIVILGRQ
Sbjct  421  DDEIVILGRQ  430


>gi|254548968|ref|ZP_05139415.1| fatty-acid-CoA ligase fadD34 [Mycobacterium tuberculosis '98-R604 
INH-RIF-EM']
Length=354

 Score =  721 bits (1862),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 354/354 (100%), Positives = 354/354 (100%), Gaps = 0/354 (0%)

Query  209  HGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFM  268
            HGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFM
Sbjct  1    HGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFM  60

Query  269  PNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALG  328
            PNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALG
Sbjct  61   PNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALG  120

Query  329  SGYGLAEATVAVSMSAPNTGFRTETHAAAEVVTGGRVLPGYEVRIDAAPGARAGTIKLRG  388
            SGYGLAEATVAVSMSAPNTGFRTETHAAAEVVTGGRVLPGYEVRIDAAPGARAGTIKLRG
Sbjct  121  SGYGLAEATVAVSMSAPNTGFRTETHAAAEVVTGGRVLPGYEVRIDAAPGARAGTIKLRG  180

Query  389  DSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEF  448
            DSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEF
Sbjct  181  DSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEF  240

Query  449  IIRGESEQHRTKVACFGVNERVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITV  508
            IIRGESEQHRTKVACFGVNERVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITV
Sbjct  241  IIRGESEQHRTKVACFGVNERVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITV  300

Query  509  RRGAIPTTTSGKLKRRAVAQAYRDGTLPRLATHAWTADPDSAPKTTRSSLEGAH  562
            RRGAIPTTTSGKLKRRAVAQAYRDGTLPRLATHAWTADPDSAPKTTRSSLEGAH
Sbjct  301  RRGAIPTTTSGKLKRRAVAQAYRDGTLPRLATHAWTADPDSAPKTTRSSLEGAH  354


>gi|254548967|ref|ZP_05139414.1| putative fatty-acid-CoA ligase [Mycobacterium tuberculosis '98-R604 
INH-RIF-EM']
Length=186

 Score =  382 bits (981),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 186/186 (100%), Positives = 186/186 (100%), Gaps = 0/186 (0%)

Query  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60
            MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV
Sbjct  1    MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPV  60

Query  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120
            LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH
Sbjct  61   LITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEH  120

Query  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180
            DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS
Sbjct  121  DEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGS  180

Query  181  TAAPRG  186
            TAAPRG
Sbjct  181  TAAPRG  186


>gi|56478676|ref|YP_160265.1| CoA ligase, AMP generating (three fragments in different reading 
frames) [Aromatoleum aromaticum EbN1]
 gi|56314719|emb|CAI09364.1| CoA ligase, AMP generating (three fragments in different reading 
frames) [Aromatoleum aromaticum EbN1]
Length=831

 Score =  236 bits (602),  Expect = 8e-60, Method: Compositional matrix adjust.
 Identities = 182/571 (32%), Positives = 266/571 (47%), Gaps = 54/571 (9%)

Query  2    TAALLSPAIAWQQISACTDRTLTI-------TCEDSEVISYQDLIARAAACIPPLRRLDL  54
            +AA L  A+ WQ +    DR   +          + E + Y  L A A      L R  +
Sbjct  44   SAADLVEALQWQ-VGRNPDRDHVLFYRGDAEQAGEPERLGYAALAADATRIAGGLVRRGV  102

Query  55   KRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLI  114
               + V +   + L+F  CF G++  GA+PVP+ P       E  + R   +LR+    +
Sbjct  103  VPDQCVALMLPSGLDFFRCFFGVLFAGAIPVPMYPPARASQIEDHLRRQAGILRNCEAPV  162

Query  115  CTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYV  174
                    +R        +                 TA++LAD   A  PL    + A V
Sbjct  163  LVAFMRPLLRVLGGLAPSLRHIV-------------TAEELADAPDAT-PLPARSEAALV  208

Query  175  QYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALF  234
            QYTSGST  P+GV +++ NLL+N+RA          DV  SWLPL+HDMGL+G+   +L+
Sbjct  209  QYTSGSTGDPKGVTLSHANLLANIRAYGRVLNVSSTDVCVSWLPLYHDMGLIGAWLGSLY  268

Query  235  NSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHK  294
            ++   V  +P  FL  P  +L  +     T T  PNFA E  +     R  D+ G+DL  
Sbjct  269  HACPLVLMSPLDFLARPECWLWAIHRHRGTITAAPNFAFELCVKRLGDR--DLAGLDLAS  326

Query  295  MRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTE--  352
             +  +  +EPV A  + RFA  F   GL    L   YGLAE ++A++M+ P  G RT+  
Sbjct  327  WQIAMNGAEPVSAGTLERFADAFGRYGLRREILAPVYGLAECSLALTMTPPGRGMRTDRI  386

Query  353  -----THA-----------AAEVVTGGRVLPGYEVRIDAA-----PGARAGTIKLRGDSV  391
                 THA           + +VV+ G  LPG+EVRI  A     P  R G ++ RG S 
Sbjct  387  ERAAMTHAGRRSPAGGDTPSVDVVSCGLPLPGHEVRIVGADGRMLPERRIGQLEFRGPSA  446

Query  392  AAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIR  451
             A  +       AL  +G+ DT D  +LVD E+ + GR  ++ I  G N +PY++E  + 
Sbjct  447  TAGYFRNPAADAALFHDGWLDTGDFAYLVDGELYVTGRAKDMIIRGGRNFYPYELEQAVG  506

Query  452  GESEQHRTKVACFGV------NERVVVVLE-SPLDSIIDKAEADRLRCQVVAATGLQLDE  504
                  +  VA FGV       ER+VVV E    D+   +A   R+        GL  DE
Sbjct  507  ELPGVRKGCVAAFGVPDAAPAGERLVVVAEMREKDAAARQALEQRIVAVSSDVLGLPADE  566

Query  505  LITVRRGAIPTTTSGKLKRRAVAQAYRDGTL  535
            ++ V   A+  T+SGK++R A+ + YR GTL
Sbjct  567  VVLVPPHAVLKTSSGKIRRGAIREGYRHGTL  597


>gi|307726757|ref|YP_003909970.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
 gi|307587282|gb|ADN60679.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
Length=947

 Score =  231 bits (590),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 181/563 (33%), Positives = 267/563 (48%), Gaps = 55/563 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPI-  87
             S  ++Y  L   A      LRRL +  G+ V +   T  ++ +CF G++L GA+ VP+ 
Sbjct  145  SSHTMTYAALYEAAQRVSGALRRLGVNPGDTVAMMLPTGSDYFACFAGILLIGAIVVPVY  204

Query  88   PPREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQF  147
            PP ++ +  +  ++R   +L   R  +     H            ++   A A     Q 
Sbjct  205  PPAQSARINDH-LSRQAAILSDARARVMIVPSH----------ALVASLLAKARVPTLQE  253

Query  148  GRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQF  207
              A AQ + +T    + +   +D A +QYTSGST AP+GVV+++ NLL+N+RAM   +Q 
Sbjct  254  IVAPAQLMGETDNERY-VPRAEDAALLQYTSGSTGAPKGVVLSHANLLANLRAMGQTAQI  312

Query  208  QHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTF  267
              GD+  SWLPL+HDMGL+G+ F  L+  +  +  +P  FL  P  +L+ ++   AT T 
Sbjct  313  GEGDIFASWLPLYHDMGLIGAWFGPLYYGIPLILMSPLTFLARPARWLQAVSHYRATITA  372

Query  268  MPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTAL  327
             PNFA E          AD+EGIDL  +R     +EPV A  MR FAA FA  G +  AL
Sbjct  373  APNFAYERCTRRIEE--ADLEGIDLSSLRLAFCGAEPVSASTMRAFAARFANYGFSKNAL  430

Query  328  GSGYGLAEATVAVSMSAPNTGFRTETHAAA------------------EVVTGGRVLPGY  369
               YGLAE T+ ++ S P  G RT+  + A                  E+V+ GR LP  
Sbjct  431  NPVYGLAENTLGLTFSEPGRGVRTDCISRARLSDSQRATPAESPDDVLELVSCGRALPHN  490

Query  370  EVRIDAAPGARA-----GTIKLRGDSVAAKAYVGGKKLDA-LDEEGFCDTHDLGFLVDDE  423
            EVRI    G        G I+ R  S A + Y     L A L   G+ DT DLG++ ++E
Sbjct  491  EVRIVDVSGNEVSERTIGRIEFRSPS-ATRGYFLNPGLTAQLIHNGWLDTGDLGYMAEEE  549

Query  424  IVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVLES-  476
            + I GR  ++ I  G + FPY++E  +          VA  G        +R++V+ E+ 
Sbjct  550  LFITGRVKDLVIRAGRHFFPYELEASVGRLRGVRSGCVAVCGAPDIERGTDRLIVIAETR  609

Query  477  -PLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAY---RD  532
                  +   +AD +    VA  G   +E+  V   +I  T+SGK++  A  Q Y   R 
Sbjct  610  ETAPEALATMQAD-INAASVALLGTPPEEVALVPPHSILKTSSGKIRHAATLQLYLASRG  668

Query  533  GTLPRLATHAWTADPDSAPKTTR  555
               PR     W    D A  T R
Sbjct  669  NLSPRAPWLQWL---DIAANTVR  688


>gi|297161053|gb|ADI10765.1| acyl-CoA synthetase [Streptomyces bingchenggensis BCW-1]
Length=497

 Score =  224 bits (571),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 173/503 (35%), Positives = 241/503 (48%), Gaps = 64/503 (12%)

Query  69   EFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAE--HDEIRAA  126
            EF+  F+G++  G +PVP+ P   L   E +  RL     H     C P     DE    
Sbjct  7    EFIVAFIGMVSAGVIPVPVFPPAMLTRIEAYRERL-----HSIHSSCEPRHIIADESLFD  61

Query  127  ASTDCQISRFTALAE-AGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPR  185
               D   ++    AE A  E  G     +  +      PL       ++QYTSGSTA P+
Sbjct  62   ICVDAVGTKPIGYAELAAGEPTGELVEAEGGE------PL-------FLQYTSGSTAMPK  108

Query  186  GVVITYRNLLSNMRAM--AVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTT  243
            GVV+T+ NLL N RAM  A+G+  +  D   SWLPL+HDMGL+G +   L   V   F  
Sbjct  109  GVVVTHDNLLENARAMDQALGTSGER-DRFVSWLPLYHDMGLIGCMLGPLVYEVPVWFIP  167

Query  244  PHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGAD--IEGIDLHKMRRLIIA  301
            P+ F   P  +L  ++    T ++ PNFA E +     RR  D  + G DL   R   + 
Sbjct  168  PYEFARRPTTWLDWMSKISGTFSYAPNFAYELVT----RRATDKQMAGWDLSAWRGAGVG  223

Query  302  SEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRT----------  351
            +EPV    MR FA  FAGVG    A+   YGLAE T+ V+ +    G RT          
Sbjct  224  AEPVRPRTMREFAERFAGVGFDANAITPSYGLAEGTLGVAFTTIGDGLRTLSVDRAAFEE  283

Query  352  -------------ETHAAAEVVTGGRVLPGYEVRIDAAPGARA-----GTIKLRGDSVAA  393
                         E     E+V+ G +L G+E RI AA G  A     G I++RG SV A
Sbjct  284  EGAVRPVEPGAGAEATGTREIVSCGPLLSGWEARIRAASGEPADESTEGQIEIRGGSV-A  342

Query  394  KAYVGGKKL-DALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRG  452
            + Y G ++L +    +G+  T DLGFL D E+ + GR  ++ I HG    P DIE+   G
Sbjct  343  RGYWGARELSEETFRDGWLRTGDLGFLRDGELYVTGRTKDLVIHHGRKYHPTDIEWSALG  402

Query  453  ESEQHRTKVACFGV-NERVVVVLE-SPLDSIIDKAEADRLRCQVVAATGLQLDELITVRR  510
                    V  F   +ER+VVV E  P  S  D A+  ++  +V  + G+  D+++ V+ 
Sbjct  403  LPGVRPDHVIAFSTPDERLVVVAEHKPASSPPDLAK--QIATRVRGSVGVTPDDVVLVKP  460

Query  511  GAIPTTTSGKLKRRAVAQAYRDG  533
            G +P T+SGKL+R A   AY  G
Sbjct  461  GTLPKTSSGKLRRAACRDAYSQG  483


>gi|257095448|ref|YP_003169089.1| AMP-dependent synthetase and ligase [Candidatus Accumulibacter 
phosphatis clade IIA str. UW-1]
 gi|257047972|gb|ACV37160.1| AMP-dependent synthetase and ligase [Candidatus Accumulibacter 
phosphatis clade IIA str. UW-1]
Length=944

 Score =  222 bits (565),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 176/547 (33%), Positives = 256/547 (47%), Gaps = 64/547 (11%)

Query  30   SEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPP  89
            +E ISY +L+ ++      L    L   + V +   T  ++L+ F G+ML G +PVPI P
Sbjct  154  AEAISYAELLEQSRRVATSLVTRGLLPRQAVALMLPTGRDYLTSFFGVMLAGGIPVPIYP  213

Query  90   REALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGR  149
               L   E        L RH R+L    A      A   T  Q     AL         R
Sbjct  214  PARLAQLEDH------LRRHARILANAEA------AFIITVPQAKGVAALL--------R  253

Query  150  ATAQQLADTATA----DWPLCTL-----DDDAYVQYTSGSTAAPRGVVITYRNLLSNMRA  200
            A A  L +  T       P+  L      D A++QYTSGST  P+GVV+T+ NLL+N+RA
Sbjct  254  AEAPSLTEVLTPAELDSEPIGLLYRAAPADIAFLQYTSGSTGEPKGVVLTHANLLANLRA  313

Query  201  MAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTS  260
            M         DV  SWLPL+HDMGL+G+ F +L+  +  V  +P  FL  P+ +LR ++ 
Sbjct  314  MGEAVAVTSDDVFVSWLPLYHDMGLIGAWFGSLYFGMRLVLMSPLAFLSRPVRWLRAISH  373

Query  261  SGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGV  320
               T +  PNFA +  + A     AD++G+DL   R  +  +EPV    ++ FA  FA  
Sbjct  374  HRGTLSPAPNFAYD--LCARKLADADLQGLDLSSWRLALNGAEPVSPLTLQAFAERFAPY  431

Query  321  GLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVV-------------------T  361
            GL P AL   YGLAE +V ++      G R +    A +V                    
Sbjct  432  GLHPEALTPVYGLAECSVGLAFPPLGRGPRVDRVQRAALVGRKHARSADSGDTDALCVPA  491

Query  362  GGRVLPGYEVRI-----DAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDL  416
             GRVLPG+E+R+        P    G ++ RG S  A  Y       AL  +G+ D+ D 
Sbjct  492  CGRVLPGHEIRVVDEQNGELPDRYVGRLQFRGPSATAGYYRNPVATQALFRDGWLDSGDF  551

Query  417  GFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVN------ERV  470
             + VD EI + GR  ++ I  G N +PY++E  +       R  VA F  N      ER+
Sbjct  552  AYTVDGEIYLTGRVKDLIIRGGRNLYPYELEQAVGSIPGVRRGCVAVFASNDPVNATERL  611

Query  471  VVVLESPLDSIIDKAEADRLRCQ--VVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQ  528
            VV+ E+  +   D+ E  R +     VAA G+  DE++     ++  T+SGK++R A   
Sbjct  612  VVMAET-REEDADRREILRQKINEAAVAAVGMPADEVVLAPPNSVLKTSSGKIRRSASRD  670

Query  529  AYRDGTL  535
            A+  G +
Sbjct  671  AFEHGLI  677


>gi|295681464|ref|YP_003610038.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
 gi|295441359|gb|ADG20527.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
Length=556

 Score =  219 bits (559),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 169/551 (31%), Positives = 258/551 (47%), Gaps = 70/551 (12%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            D     Y+ L   A      L  L L +GE + +       F+  FLG    G VPVPI 
Sbjct  28   DEHYYPYEALEREARKRAQKLVSLGLNKGERIALVILDPEAFILSFLGASFAGLVPVPIF  87

Query  89   PREAL--KTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGD  144
            PR +L  +T ER+   +  ++R    R+L+ + +  + I    + D  + R   +    D
Sbjct  88   PRGSLNFRTRERYAETVSHIVRSAGARMLLTSNSTRETIEDVLAADTGLERIVTVEALLD  147

Query  145  EQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAM--A  202
                        +    D P    DD  ++QYTSGST+ P+GV++T+RNL++N  A    
Sbjct  148  -----------GEPPACDLPTLHPDDLCFLQYTSGSTSLPKGVMVTHRNLIANATAFLGP  196

Query  203  VGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSG  262
             G      DV  SWLPLHHDMGL+ S+  AL   + +V  +   F+  P  ++  +T   
Sbjct  197  RGIDLHEQDVYVSWLPLHHDMGLI-SVLGALICDLPSVLLSTEAFVRRPGLWMEAITKYR  255

Query  263  ATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGL  322
             T +F PNFA  + + A   R  D+EG+DL ++R     +EP++A+ +R+F+A F   G 
Sbjct  256  GTISFAPNFA--YALAARRTRDQDLEGLDLSRLRVAGCGAEPINAQALRQFSARFEPAGF  313

Query  323  APTALGSGYGLAEATVAVSM------------------------SAPNTGFRTETHAAAE  358
               AL   YG+AEAT+A++                         +A +TG RT      E
Sbjct  314  RAEALLPCYGMAEATLAITFHDHGQPIVTDVVYAAPLGLGRAIPAAHDTGLRT-----IE  368

Query  359  VVTGGRVLPGYEVRI-----DAAPGARAGTIKLRGDSVAAKAY-VGGKKLDALDEEGFCD  412
            +V  G   PG+++RI        P    G I  RG S+ A  Y +     DA   +G+  
Sbjct  369  LVGCGHCFPGHDLRIVDESGRGLPERCVGEIVTRGPSITAGYYGLADASADAY-RDGWLQ  427

Query  413  THDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV----NE  468
            T DLG++  D++ I GR  ++ ++HG N +P DIE+ +          V  F V    +E
Sbjct  428  TGDLGYVAGDQLYICGRSKDLIVIHGSNLYPQDIEWAVAELPSVQSRGVIAFSVMRDGDE  487

Query  469  RVVVVLESPLDSIIDKAEADRLR----CQVVAATGLQLDELITVRRGAIPTTTSGKLKRR  524
             +VV  E         AEA  LR     +V    GLQ+  +  V+ G++P T+SGK++RR
Sbjct  488  TLVVCAEG------KPAEATALRRAIAQKVAECAGLQVGHVAIVQAGSLPRTSSGKVQRR  541

Query  525  AVAQAYRDGTL  535
                 +  G L
Sbjct  542  RTKAQFEAGEL  552


>gi|162455335|ref|YP_001617702.1| acyl-CoA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161165917|emb|CAN97222.1| acyl-CoA synthetase [Sorangium cellulosum 'So ce 56']
Length=601

 Score =  219 bits (559),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 169/530 (32%), Positives = 252/530 (48%), Gaps = 61/530 (11%)

Query  49   LRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPI-PPREALKTTERFMTRLGPLL  107
            L+ L L++G+ V +    N +F+  FLG +  G +PVPI PP    K T      L  + 
Sbjct  54   LQALGLQKGDRVALILPDNADFIFAFLGAIRAGVIPVPIYPPTGLGKLTGYLENTLHIVA  113

Query  108  RHHRVLICTPAEHDE----IRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADW  163
            +    ++ T AE       I+A A    QI     L         R   ++L        
Sbjct  114  KSGAKVLLTSAEIKRMLGTIQAQAPALEQIVAVEGL---------RGAREELKPVK----  160

Query  164  PLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRA---MAVGSQFQHGDVMGSWLPLH  220
                LDD  ++Q+TSGST+ P+GVV+T+ NL +N+RA   + +G + +  D   SWLPL+
Sbjct  161  --VELDDVCFLQFTSGSTSRPKGVVLTHGNLAANVRAIVDLGLGVR-ESVDTGVSWLPLY  217

Query  221  HDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAY  280
            HDMGL+G + A L+   +  F  P  FL  P+ +L  +T      +F PNFA    +   
Sbjct  218  HDMGLIGFVIAPLYYVNTITFLPPLLFLKRPVRWLETITRHRGNVSFGPNFAYALCVKRI  277

Query  281  HRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAV  340
              R  ++ G+DL   R     +EP+ A+ +R FA  FA VG    A    YG+AE+T+AV
Sbjct  278  --REQEMAGLDLSTWRVAGCGAEPIRADNLRAFAEKFAPVGFDEKAFVCSYGMAESTLAV  335

Query  341  SMSAPNTGFRT-------------------ETHAAAEVVTGGRVLPGYEVRI---DAAPG  378
            S SA   G +T                   ++  A+ +V  G    G+E+ +   D A  
Sbjct  336  SFSALGAGLQTDAVDGETLWKEGKATPVPADSEGASSLVQCGSAFEGHEIAVFASDDAES  395

Query  379  AR------AGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDE  432
            AR       G ++LRG SV    +            G+  T DLG+L + ++ I GR  E
Sbjct  396  ARPLGDREVGELRLRGPSVMPGYFNDPDLTKEAFAGGWLRTGDLGYLAEGKVYICGRSKE  455

Query  433  VFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVLESPL-DSIIDKA  485
            V IV+G N +P D+E+     S   +  V  FG        ERVV+V E+P  D    +A
Sbjct  456  VIIVNGRNYYPQDLEWEASRVSGVRKGNVIAFGTMKPHNDRERVVIVFETPASDEQEKQA  515

Query  486  EADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTL  535
                +R  V  A GL +D+++ V  G +P T+SGKL+R    + Y +G L
Sbjct  516  LKGEVRRVVQQAMGLTVDDVVAVGSGILPKTSSGKLQRSKTRELYENGEL  565


>gi|209515271|ref|ZP_03264138.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
 gi|209504252|gb|EEA04241.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length=556

 Score =  218 bits (555),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 172/555 (31%), Positives = 256/555 (47%), Gaps = 72/555 (12%)

Query  26   TCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPV  85
            T  D     Y+ L   A      L  L LK+GE + +       F+  FLG    G VPV
Sbjct  25   TNGDEHYYPYEALEHEARKRARKLAALGLKKGERIALVILDPEAFILSFLGASFAGLVPV  84

Query  86   PIPPREAL--KTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAE  141
            PI PR +L  +T  R+   +  ++R    R+L+ +    + I    + D  +        
Sbjct  85   PIFPRGSLNFRTRARYAETVSHIVRSAGARMLLTSDTARETIEEVLAVDTGLECIV----  140

Query  142  AGDEQFGRATAQQLAD--TATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMR  199
                     T + LAD      D P    DD  ++QYTSGST+ P+GV++T+RNL++N R
Sbjct  141  ---------TVESLADGEPPACDLPTVHPDDLCFLQYTSGSTSLPKGVMVTHRNLVANAR  191

Query  200  AM--AVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRL  257
            A     G   +  DV  SWLPLHHDMGL+ S+  AL   + +V  +   F+  P  ++  
Sbjct  192  AFLGPRGIDLRKQDVYVSWLPLHHDMGLI-SVLGALICDLPSVLISTEAFVRRPGLWMEA  250

Query  258  LTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATF  317
            +T  G T +F PNFA  + + A   R  D+EG+DL  +R     +EP++A+ +R+F   F
Sbjct  251  ITKYGGTISFAPNFA--YALAARRTRDKDLEGLDLRPLRVAGCGAEPINAQALRQFCERF  308

Query  318  AGVGLAPTALGSGYGLAEATVAVS-----------------------MSAP-NTGFRTET  353
               G    AL   YG+AEAT+A++                       + AP +TG RT  
Sbjct  309  EPAGFRAEALLPCYGMAEATLAITFHDHGQPIVTDVVYASALGLGRAIPAPRDTGLRT--  366

Query  354  HAAAEVVTGGRVLPGYEVRI-----DAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEE  408
                E+V  G    G+E+RI        P    G I  RG S+    Y           +
Sbjct  367  ---VELVGCGHPFAGHELRIVDESGRPLPERCVGEIVTRGPSITVGYYGQSDATADAYRD  423

Query  409  GFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV--  466
            G+  T DLG+L  D++ I GR  ++ ++HG N +P DIE+ +    +     V  F V  
Sbjct  424  GWLQTGDLGYLAGDQLFICGRSKDLIVIHGSNHYPQDIEWAVAELPDVQSRGVIAFSVMR  483

Query  467  --NERVVVVLESPLDSIIDKAEADRLR----CQVVAATGLQLDELITVRRGAIPTTTSGK  520
              +E +VV  E         AEA  LR     +V    GLQ+  +  V+ G++P T+SGK
Sbjct  484  DGDETLVVCAEG------KPAEAAALRRAIAQKVAECAGLQVGHVAVVQAGSLPRTSSGK  537

Query  521  LKRRAVAQAYRDGTL  535
            ++RR     +  G L
Sbjct  538  VQRRRTKAQFEAGEL  552


>gi|335419445|ref|ZP_08550497.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis 
E1L3A]
 gi|334896610|gb|EGM34758.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis 
E1L3A]
Length=651

 Score =  216 bits (551),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 179/565 (32%), Positives = 266/565 (48%), Gaps = 65/565 (11%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            D   ++Y+ L   A   +  L+   ++ GEP+++    NL FL  F G +  G VPVPI 
Sbjct  29   DERGLNYRMLARSAEGRLAVLQEQGIQAGEPLILFVEDNLRFLQFFWGAIYGGIVPVPI-  87

Query  89   PREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFG  148
               A   T   + +L  + RH           DE R  AS    I R     E   E   
Sbjct  88   ---AAGATPAQLEKLVRVWRHL----------DEPRIVASPK-HIERVRDFMEQRGE---  130

Query  149  RATAQQLADTATADWPLC----------TLDDDAYVQYTSGSTAAPRGVVITYRNLLSNM  198
            R T ++LA+ + +D P            T  D A++Q++SGST  P+GVV+T+ N+L+N+
Sbjct  131  RDTGERLAERSLSDEPPAVETPAERASLTPQDTAFIQFSSGSTGDPKGVVLTHANVLANI  190

Query  199  RAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLL  258
             A++ GSQF   +V  SW+PL HDMGL+G     ++N       TP  F   PL +L   
Sbjct  191  EAISSGSQFGRDEVALSWMPLTHDMGLIGFHLTLVYNGFVHYLMTPDLFARRPLLWLEKA  250

Query  259  TSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFA  318
                AT    PNF     + A   +G     +DL  +R +   +EP+    +R F AT A
Sbjct  251  AEIRATLLCSPNFGYRHTLRAIAAKGR--PELDLSSVRLIYNGAEPIAPALVREFLATLA  308

Query  319  GVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVVTGG--RVLPG--------  368
              GL  T + + YGLAEA++A +  AP  G R+ + A  E+  G   R  PG        
Sbjct  309  PTGLKATTMFAVYGLAEASLAATFPAPGRGLRSVSVARGELGLGDTVRYDPGAQALELVC  368

Query  369  -------YEVRI-----DAAPGARAGTIKLRGDSVAAKAYVG-GKKLDALDEEGFCDTHD  415
                    E+++     DA      G + +RG +V A  Y       DAL  +G+ DT D
Sbjct  369  LGTPVRSTELKLADAQGDAVEEGVVGRVWIRGANVTAGYYGNPNANADALVGDGWLDTGD  428

Query  416  LGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVN-----ERV  470
            LGF  D E+VI GR  E+  V+G+N +P DIE +++        K+A  GV      E+ 
Sbjct  429  LGFCYDGELVITGRAKEIIFVNGQNHYPQDIEALLQDVPGAELNKLAAAGVQAPSTTEQA  488

Query  471  VVVLESPLDSIIDKAEADR-LRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQA  529
            +V+       + D A   R LR  +    GL   +++ + R  +P TTSGKL+R  +A+ 
Sbjct  489  LVLFVVFRGHLEDFAAIARELRGALNQRAGLVASQVLPISR--MPKTTSGKLQRSLLARQ  546

Query  530  YRDG----TLPRLATHAWTADPDSA  550
            Y +G     +  L      A+P+SA
Sbjct  547  YAEGEFAAIVAELDKLLGAAEPESA  571


>gi|115378536|ref|ZP_01465692.1| saframycin Mx1 synthetase B [Stigmatella aurantiaca DW4/3-1]
 gi|310822384|ref|YP_003954742.1| saframycin mx1 synthetase b [Stigmatella aurantiaca DW4/3-1]
 gi|115364458|gb|EAU63537.1| saframycin Mx1 synthetase B [Stigmatella aurantiaca DW4/3-1]
 gi|309395456|gb|ADO72915.1| Saframycin Mx1 synthetase B [Stigmatella aurantiaca DW4/3-1]
Length=583

 Score =  214 bits (546),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 163/523 (32%), Positives = 261/523 (50%), Gaps = 41/523 (7%)

Query  33   ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREA  92
            ++Y+ +  R AAC    R   ++ G+ +L    T+   +  F GLM  GAVP  + P   
Sbjct  31   LAYRAMPERIAACAEHFRAQGIQPGDRILFPFETSEAVILSFFGLMALGAVPFSVKP-YI  89

Query  93   LKTTE----RFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFG  148
            L T +     F++RL      +R+L        ++ +  S +  + R   L  AG     
Sbjct  90   LSTPKGAYRDFLSRLSSRHGVNRIL--------DVPSVRSLELALVR-VPLPPAG-----  135

Query  149  RATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQ  208
                   A  A A   +   D  A+VQ++SGSTA P+GV IT+RNL +N+R +       
Sbjct  136  -------ARLAGARPRVPEEDALAFVQFSSGSTAFPKGVPITWRNLHANLRMIQNQGALC  188

Query  209  HGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFM  268
              D   SWLPL+HDMGLVG + A ++    ++ T P  FL DP+G+L  L+    T   +
Sbjct  189  AQDRCVSWLPLYHDMGLVGGMLACMYGHCDSLLTQPMSFLMDPMGWLEFLSEHRGTLAVI  248

Query  269  PNFALEWLINAYHRRGA-DIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTAL  327
            PNFA+++ +   +  GA ++  +DL  +R + + SEP++   + RF    A  GL   A+
Sbjct  249  PNFAIDYTLKILNGLGAEELRELDLSALRTVYLGSEPINIANLERFTVLLAPQGLRREAI  308

Query  328  GSGYGLAEATVAVSMSAPNTGFRTETHAAAE-VVTGGRVLPGYEVRIDAAPG-----ARA  381
               YG+AE  + VS      G+R  T    +  ++ G  L  +EVR+    G        
Sbjct  309  KPCYGMAEVVLMVSCVG-EEGWRVVTGPHGQPAISVGYPLSEFEVRLRTEEGRVSGEREL  367

Query  382  GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENR  441
            G I+LR  S+A   Y   + L    EEGF  T DLGF+ D E+ I GR ++   ++G++ 
Sbjct  368  GQIELRSGSLAQAYYADERPLRG--EEGFYPTGDLGFMQDGELFITGRLNDRIKINGQSY  425

Query  442  FPYDIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDSII-DKAEADR-LRCQVVAATG  499
            F  D E  +   +     + A      RVVV+ E     ++ D++   R +   ++ A G
Sbjct  426  FSSDFEQAVERLAFIRSGRSAVIQAQGRVVVLAEVNGPEVLEDRSVGQRQVAAAILEAMG  485

Query  500  LQ--LDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLAT  540
            +   L++++ +R G +P T+SGKL+RRA+ +AY  G + R+AT
Sbjct  486  VTVALEDVLFIRYGQLPKTSSGKLQRRAITEAYEQGHI-RVAT  527


>gi|215919292|ref|NP_820905.2| acyl-CoA synthetase [Coxiella burnetii RSA 493]
 gi|206584177|gb|AAO91419.2| acyl-CoA synthetase [Coxiella burnetii RSA 493]
Length=936

 Score =  214 bits (544),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 162/543 (30%), Positives = 244/543 (45%), Gaps = 50/543 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            +  +I Y +L  RA      L    LK  E V I   T+ +F   FLG ++ G +PVPI 
Sbjct  138  EETIIRYGELYTRAKEFAQGLVGKGLKPSETVAIMLPTSADFFYSFLGTLMAGGIPVPIY  197

Query  89   PREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQ  146
            P       E +  R   +L +   R LI         RAAA +    S   +L E     
Sbjct  198  PPFRADQIEEYAKREAFILHNAGVRFLITFK------RAAALSKLLQSFVPSLLEV----  247

Query  147  FGRATAQQLADTATADWPLCTLD--DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
                T + L D  +AD P   ++  D   +QYTSGST  P+GV++ + NLL+N+ A    
Sbjct  248  ---TTVKALTDI-SADLPTLDIEATDPVLIQYTSGSTGNPKGVLLNHANLLANISAYGKT  303

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
               Q  D   SWLPL+HDMGL+G+   + ++ +     +P  FL  P  +L  +     T
Sbjct  304  LNMQSTDAFVSWLPLYHDMGLIGAWMGSFYHGLPLTLLSPFTFLSRPEKWLWAIHYHRGT  363

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  PNFA +  +       +D+EG+DL   R  +  SE +H + +R F   F   G   
Sbjct  364  ISPGPNFAYDLCVKKIE--DSDLEGLDLSSWRVALNGSEMIHPDTLRNFEKRFRKYGFKK  421

Query  325  TALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAEVVTGGRV  365
             A+   YGLAE  + ++    N G                     T      E V+ G V
Sbjct  422  EAIFPAYGLAECALGLTFPPLNRGPNIDRIERLPYEKNNTAVPLTTRDKKYYEFVSCGSV  481

Query  366  LPGYEVRI----DAAPGARA-GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            L G+E+RI    D     R  G I+ +G S     Y   +   A+   G+  T DLG+L 
Sbjct  482  LEGHEIRIVDDNDNRVAERTIGNIQFKGPSAMQGYYRNSEATMAIYHNGWWATGDLGYLA  541

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVL  474
            + E+ I GR+ ++ I  G N  P +IE +        ++ VA FGV       E++++V 
Sbjct  542  EGELFITGRKKDLIIKAGRNYHPTEIEAMASLAEGVRKSCVAAFGVADEKRGTEKLIIVA  601

Query  475  ESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGT  534
            E+  D  I       +  +V++  G+  DE++ V    +P T+SGKL+R +  Q Y  G 
Sbjct  602  ETKEDKKIQPEIKKEIVDKVISQIGIPPDEILLVPPHTLPKTSSGKLRRSSCKQDYLAGK  661

Query  535  LPR  537
            L R
Sbjct  662  LSR  664


>gi|161830319|ref|YP_001597743.1| acyltransferase family protein [Coxiella burnetii RSA 331]
 gi|161762186|gb|ABX77828.1| acyltransferase family protein [Coxiella burnetii RSA 331]
Length=852

 Score =  213 bits (543),  Expect = 5e-53, Method: Compositional matrix adjust.
 Identities = 162/549 (30%), Positives = 246/549 (45%), Gaps = 50/549 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            +  +I Y +L  RA      L    LK  E V I   T+ +F   FLG ++ G +PVPI 
Sbjct  55   EETIIRYGELYTRAKEFAQGLVGKGLKPSETVAIMLPTSADFFYSFLGTLMAGGIPVPIY  114

Query  89   PREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQ  146
            P       E +  R   +L +   R LI         RAAA +    S   +L E     
Sbjct  115  PPFRADQIEEYAKREAFILHNAGVRFLITFK------RAAALSKLLQSFVPSLLEV----  164

Query  147  FGRATAQQLADTATADWPLCTLD--DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
                T + L D  +AD P   ++  D   +QYTSGST  P+GV++ + NLL+N+ A    
Sbjct  165  ---TTVKALTDI-SADLPTLDIEATDPVLIQYTSGSTGNPKGVLLNHANLLANISAYGKT  220

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
               Q  D   SWLPL+HDMGL+G+   + ++ +     +P  FL  P  +L  +     T
Sbjct  221  LNMQSTDAFVSWLPLYHDMGLIGAWMGSFYHGLPLTLLSPFTFLSRPEKWLWAIHYHRGT  280

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  PNFA +  +       +D+EG+DL   R  +  SE +H + +R F   F   G   
Sbjct  281  ISPGPNFAYDLCVKKIE--DSDLEGLDLSSWRVALNGSEMIHPDTLRNFEKRFRKYGFKK  338

Query  325  TALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAEVVTGGRV  365
             A+   YGLAE  + ++    N G                     T      E V+ G V
Sbjct  339  EAIFPAYGLAECALGLTFPPLNRGPNIDRIERLPYEKNNTAVPLTTRDKKYYEFVSCGSV  398

Query  366  LPGYEVRIDAAPGARA-----GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            L G+E+RI      R      G I+ +G S     Y   +   A+   G+  T DLG+L 
Sbjct  399  LEGHEIRIVDDNDNRVAERTIGNIQFKGPSAMQGYYRNSEATMAIYHNGWWATGDLGYLA  458

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVL  474
            + E+ I GR+ ++ I  G N  P +IE +        ++ VA FGV       E++++V 
Sbjct  459  EGELFITGRKKDLIIKAGRNYHPTEIEAMASLAEGVRKSCVAAFGVADEKRGTEKLIIVA  518

Query  475  ESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGT  534
            E+  D  I       +  +V++  G+  DE++ V    +P T+SGKL+R +  Q Y  G 
Sbjct  519  ETKEDKKIHPEIKKEIVDKVISQIGIPPDEILLVPPHTLPKTSSGKLRRSSCKQDYLAGK  578

Query  535  LPRLATHAW  543
            L R +  A+
Sbjct  579  LSRPSRSAF  587


>gi|296160928|ref|ZP_06843740.1| AMP-dependent synthetase and ligase [Burkholderia sp. Ch1-1]
 gi|295888817|gb|EFG68623.1| AMP-dependent synthetase and ligase [Burkholderia sp. Ch1-1]
Length=941

 Score =  212 bits (539),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 171/559 (31%), Positives = 250/559 (45%), Gaps = 50/559 (8%)

Query  20   DRTLTITCEDSEV---ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLG  76
             RT  I  ED      +SY +L  RAAA    LR   +  G+ V +   T  ++   F+ 
Sbjct  120  QRTHIIFLEDGATPAGLSYGELYRRAAAAASGLRSRGIGPGDTVALMLATGWDYFVSFIA  179

Query  77   LMLHGAVPVPIPPREALKTTERFMTRLGPLLRH--HRVLICTPAEHDEIRAAASTDCQIS  134
            +++ GA PVPI P   +   E  + R   +L +   + LI +P    E+         + 
Sbjct  180  ILMSGATPVPIYPPARVSQIEEHVRRHAAVLSNAGAKALIASP----EV-------AGVG  228

Query  135  RFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNL  194
            R   L     +     TA Q+              D A +QYTSGST  P+GV++T+ NL
Sbjct  229  RLLKLYVPALQHV--LTAAQIGVDRNETPVPGAAADMALLQYTSGSTGDPKGVMLTHANL  286

Query  195  LSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGF  254
            L+N+RAM    Q   GDV+ SWLPL+HDMGL+G+ F  L+  +  V   P  FL  P  +
Sbjct  287  LANIRAMGSRMQITAGDVLVSWLPLYHDMGLIGAWFGPLYFGMPLVIMPPTVFLARPELW  346

Query  255  LRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFA  314
            L+ +     T T  PNFA        H   A + G+DL  +R     +EPV A  +R F+
Sbjct  347  LQSIQRYRGTLTAAPNFAYAHCTQ--HLDEASLAGLDLSSLRFAFCGAEPVSAATLRSFS  404

Query  315  ATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTE------------------THAA  356
            A F+  G    A+   YGLAE T+ +S   P  G   +                  +  A
Sbjct  405  ARFSQYGFDARAVTPVYGLAENTLGLSFPPPGRGLHVDRVERVALGATGQALPAPSSEDA  464

Query  357  AEVVTGGRVLPGYEVRI-----DAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFC  411
             EVV  G  L   +VRI        P  R G I+ RG S +A  +    + + L   G+ 
Sbjct  465  VEVVGCGEALDSVDVRIVDDNAQEQPERRVGHIEFRGPSASAGYFHNPAQTERLIHNGWL  524

Query  412  DTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV-----  466
            DT DLG+L D E+ I GR  ++ I  G + FPY++E  I    E     VA  G      
Sbjct  525  DTGDLGYLADRELFITGRAKDLIIRGGRHIFPYELEEAIGRLPEVPPGGVAVCGSIDRAS  584

Query  467  -NERVVVVLESPLDSIIDKAE-ADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRR  524
              ER+V+++E+ L     + +   R+  + V   G   +++  V    I  T SGK++  
Sbjct  585  GTERIVILVETALTQAAAREQLLARIHARTVELLGAPAEQVCLVAPETILKTPSGKIRHA  644

Query  525  AVAQAYRDGTLPRLATHAW  543
            A  + +  G     A  AW
Sbjct  645  ATLEQFERGGRASPARPAW  663


>gi|238024664|ref|YP_002908896.1| Saframycin Mx1 synthetase [Burkholderia glumae BGR1]
 gi|237879329|gb|ACR31661.1| Saframycin Mx1 synthetase [Burkholderia glumae BGR1]
Length=1819

 Score =  211 bits (537),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 188/576 (33%), Positives = 263/576 (46%), Gaps = 86/576 (14%)

Query  21   RTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLH  80
            R LT    ++  +S+ +L  RA A    L R +  RGEPVL+     L+F++ F G +  
Sbjct  77   RFLTDGVVEAPRLSFAELDRRATAIAARLAR-ECPRGEPVLLLYRPGLDFIAAFFGCLYA  135

Query  81   GAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDC---QISRFT  137
            G   VP  P     T            R +R+            AA   DC    I    
Sbjct  136  GCAAVPAYPPSGRAT------------RRNRL------------AAIIADCGAGAILTSD  171

Query  138  ALAEAGDEQFGRATAQQLA-------------DTATADWPLCTLDDDAYVQYTSGSTAAP  184
             L EA  E+  +A     A             + + AD         A++QYTSGST  P
Sbjct  172  ELVEAIREEIAQADVPSRAGVIGTDALLAAPGEASDADGAALPASHLAFLQYTSGSTGRP  231

Query  185  RGVVITYRNLLSNMRAMAVGSQFQHGD--VMGSWLPLHHDMGLVGSLFAALFNSVSAVFT  242
            +GV +T+RNLL+N RA+  G  F HG   V   W PL+HDMGL+G++   ++  + +V  
Sbjct  232  KGVRVTHRNLLANERAIREG--FGHGPDTVFVGWCPLYHDMGLIGNVLQPVYLGIPSVLM  289

Query  243  TPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIAS  302
            +P  FL  PL +LR +++ GAT +  PNFA E  + A     AD  G+DL   R     +
Sbjct  290  SPFEFLQQPLKWLRAISTYGATTSGGPNFAYE--LCATRIAEADKAGLDLSSWRVAFNGA  347

Query  303  EPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRT-----------  351
            EP+ A  + +FAA FA  G    A+   YG+AE T+ VS + P  G  T           
Sbjct  348  EPIRASTLDKFAAAFADYGFDAGAMFPCYGMAETTLFVSGAVPGAGALTRRVDALALQAG  407

Query  352  ------ETHAAAEVVTGGRVLPGYEVRIDAAPGARA------GTIKLRGDSVAAKAYVG-  398
                  +   AAE+V+ GRV    +VRI      RA      G I +RG SVA   +   
Sbjct  408  RCVDAADGQPAAELVSSGRVGGDQQVRIVDPHSLRARGPGEIGEIWVRGGSVADGYWNRE  467

Query  399  -------GKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIR  451
                     ++   D   F  T DLG L   E+ + GR  E+ I+ G N +P DIE  + 
Sbjct  468  DDTRAQFDARIAGEDSPPFLRTGDLGLLDGGELYVTGRLKELIIIRGRNHYPTDIEQTVE  527

Query  452  GESEQHRTKV-ACFGVN----ERVVVVLE---SPLDSIIDKAEADRLRCQVVAATGLQLD  503
              S   R    A F ++    ER+VVV E   +   S+  +    R    V AA G+ L 
Sbjct  528  QSSADFRAGCGAAFAIDGEDGERLVVVQEIQRAVRKSLDAEEAGRRAAAAVAAAHGIPLH  587

Query  504  ELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLA  539
            EL+ V+ G +P T+SGK +R  V Q Y +G LP LA
Sbjct  588  ELVLVQAGVVPKTSSGKNQRTLVRQHYLNGELPVLA  623


>gi|186471740|ref|YP_001863058.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
 gi|184198049|gb|ACC76012.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
Length=962

 Score =  211 bits (536),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 174/540 (33%), Positives = 256/540 (48%), Gaps = 70/540 (12%)

Query  49   LRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLR  108
            LR++ +  G+ V +   T  ++ +CF G++L GA+ VP+ P       +  + R   +L 
Sbjct  180  LRQIGVNPGDTVALMLPTGSDYFACFAGILLLGAIVVPVYPPAQSARIDDHLARHAAILS  239

Query  109  HHRVLICTPAEHDEIRAAASTDCQISRFTALAE--AGDEQFGRATAQQLADTATADWPLC  166
              R  +     H  +    +     +R   L E  A  +  G   A+Q    A       
Sbjct  240  DARARVMIVPSHAFVAGVMAK----ARIPTLHEIVAVPQLMGEMDAEQYVPRA-------  288

Query  167  TLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLV  226
              +D A +QYTSGST  P+GVV+T+ NLL+N+RAM   +  +  DV  SWLPL+HDMGL+
Sbjct  289  --EDVALLQYTSGSTGTPKGVVLTHANLLANIRAMGHTALIEEHDVFVSWLPLYHDMGLI  346

Query  227  GSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGAD  286
            G+ F  L+  +  V  +P  FL  P  +L  ++   AT T  PNFA E    A      D
Sbjct  347  GAWFGPLYFGIPLVLMSPLTFLARPARWLHAISDYHATITAAPNFAYERC--ARRVDDTD  404

Query  287  IEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPN  346
            +E +DL  +R     +EPV A  MR FA+ FA  G   TAL   YGLAE T+ ++ S P 
Sbjct  405  LEDVDLSSLRLAFCGAEPVSAATMRAFASRFARNGFRHTALTPVYGLAENTLGLAFSEPG  464

Query  347  TGFRT---------ETHAAA---------EVVTGGRVLPGYEVRIDAAPGAR-----AGT  383
             G RT         ++  AA         E+V+ GR LP  ++RI  A G        G 
Sbjct  465  RGVRTDCISRVRLADSQRAAPAESPDEVLELVSCGRALPRNQIRIMDADGNEVSERAVGR  524

Query  384  IKLRGDSVAAKAYVGGKKLDA-LDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRF  442
            I+ R  S A + Y     L A L  +G+ DT DLG++ D+E+ I GR  ++ I  G + +
Sbjct  525  IEFRSPS-ATRGYFQNPNLTARLIHDGWLDTGDLGYMADEELFITGRVKDLVIRAGRHFY  583

Query  443  PYDIEFIIRGESEQHRTK-VACFGV------NERVVVVLES---------PLDSIIDKAE  486
            PY++E  + G     RT  VA  G        +R++V+ E+          + S I++A 
Sbjct  584  PYELEAAV-GRLPGVRTGCVAVCGTPDVETGTDRLLVIAETRATAPATLAAIRSGINEAS  642

Query  487  ADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAY---RDGTLPRLATHAW  543
                    VA  G   +E+  V   +I  T+SGK++  A    Y   R   LPR A   W
Sbjct  643  --------VALLGAPPEEVALVPPHSILKTSSGKIRHAATLDLYMRSRGNLLPRPAWRQW  694


>gi|300311697|ref|YP_003775789.1| acyltransferase family protein [Herbaspirillum seropedicae SmR1]
 gi|300074482|gb|ADJ63881.1| acyltransferase family protein [Herbaspirillum seropedicae SmR1]
Length=932

 Score =  210 bits (534),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 163/555 (30%), Positives = 253/555 (46%), Gaps = 69/555 (12%)

Query  33   ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREA  92
            I Y DL+  A      L +  L   + V +   T+ ++L+CF G++  G +PVPI P   
Sbjct  144  IRYCDLLDDAKMVATALLQGGLLPKQTVALMLPTSRDYLACFFGILFAGGIPVPIYPPAR  203

Query  93   LKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATA  152
            L   +        L RHH +L               ++ +      LAEA  + F R   
Sbjct  204  LSRID------DQLRRHHHIL---------------SNSEAVFIVTLAEA--KPFARMLQ  240

Query  153  QQLADTATADWPL------------CTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRA  200
             +L    +   P              + DD A++QYTSGST  P+GV +T+ NLLSN+RA
Sbjct  241  AKLPGLMSILTPAELKSSAGFLRYRPSRDDIAFIQYTSGSTGDPKGVTLTHANLLSNVRA  300

Query  201  MAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTS  260
            +   S+    D+  SWLPL+HDMGL+G+ F +L++ +  V  +P  FL  P  +L  L+ 
Sbjct  301  LGKVSRVSPSDIFVSWLPLYHDMGLIGAWFGSLYHGIPLVLMSPMTFLAQPSIWLDQLSR  360

Query  261  SGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGV  320
               T +  PNFA E  +   H   A +  +DL   R  +  SEPV A  +  FA  F G 
Sbjct  361  HRGTISAAPNFAYELCLR--HVNDALLSSLDLSCWRLALNGSEPVSATTLASFAKRFEGC  418

Query  321  GLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHA--------------------AAEVV  360
            GL   A+   YGLAE +V +S    +   R ++ +                      +V 
Sbjct  419  GLRYRAMTPVYGLAECSVGLSFPVLDADPRIDSISRQLLAREGKALHPDSADAADTIKVP  478

Query  361  TGGRVLPGYEVRI--DAA---PGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHD  415
            + G  LPG+++R+  DA    P    G ++ RG S     Y   K    L  +G+ D+ D
Sbjct  479  SCGPALPGHQIRVVDDAGFELPSRCVGRLEFRGPSATHGYYRNPKATANLFHDGWLDSGD  538

Query  416  LGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVN------ER  469
              +L + E+ I+GR  ++    G N +PYD+E  +       R  VA FG N      ER
Sbjct  539  YAYLAEGEVYIVGRIKDLIKRGGRNLYPYDLEQAVSHVRGIRRGGVAVFGSNDPENGAER  598

Query  470  VVVVLESPLDSIIDKAEADR-LRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQ  528
            +V+V E+ +     +A   R +    +   G   D+++ V    +  T+SGK++R A   
Sbjct  599  LVIVAETEIQDTKLQASMRRAVHEASIDVIGEPPDDVVFVPPHWVLRTSSGKIRRLACKA  658

Query  529  AYRDGTLPRLATHAW  543
            AY +G +    + +W
Sbjct  659  AYEEGRVSHRFSMSW  673


>gi|162450802|ref|YP_001613169.1| acyl-CoA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161161384|emb|CAN92689.1| acyl-CoA synthetase [Sorangium cellulosum 'So ce 56']
Length=607

 Score =  209 bits (532),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 181/557 (33%), Positives = 273/557 (50%), Gaps = 40/557 (7%)

Query  13   QQISACTDRTLTITCEDSE--VISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEF  70
            QQ S   DR +T      E   ISY +L   A      LR+L L++G+ V +      EF
Sbjct  9    QQNSVHADRAVTFVRSSGEERAISYAELWLEARRRAYALRKLGLRKGDRVALILTEADEF  68

Query  71   LSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAAS  128
            +  F+G +  G V VP+ P ++L   E +   +  +L      VL+      + I A  +
Sbjct  69   VLTFVGALTAGIVAVPMYPPQSLAKLEAYGETVQHILEASGASVLVTNEQLKEMIDAYLA  128

Query  129  TDCQISR--FTALAEAGDEQFGRATAQQLADTATADWPL-CTLDDDAYVQYTSGSTAAPR  185
             + + SR     L    +           +D + A  P   +LDD A++Q+TSGST+ P+
Sbjct  129  ANAE-SREALPGLRVVLERDLRARDGSDASDASHAAEPWRVSLDDLAFLQFTSGSTSRPK  187

Query  186  GVVITYRNLLSNMRA-MAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTP  244
            GV++T+RNL  N  A M  G +    D   SWLPL+HDMGL+G + A L+  V  +F   
Sbjct  188  GVMVTHRNLTVNSHAIMFDGLRSTPEDRGVSWLPLYHDMGLIGFVIAPLYALVPVMFLPT  247

Query  245  HRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEP  304
              F+  P  +L  +     T TF PNFA      A     A     DL  +R L   +EP
Sbjct  248  TAFIRRPSLWLDAIHRFRGTITFAPNFAFALATRAVT--DAQAGSWDLSCVRALGCGAEP  305

Query  305  VHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMS---APNTGFRTETH-------  354
            + A+ +R F   F+  GL P ++   YG+AEAT+A++ S   AP T  R +         
Sbjct  306  IQADVLRAFLRRFSERGLRPESILPSYGMAEATLAITFSDLKAPLTTDRVDAKAMQAGKA  365

Query  355  ------AAAEVVTGGRVLPGYEVRI---DAAP-GAR-AGTIKLRGDSVAAKAYVGGKKLD  403
                  A+ E+V+ GR LP +E+ I   D +P G R  G I +RG SVAA  +   +  +
Sbjct  366  WPANGGASLELVSCGRPLPCHELIIAGPDGSPLGPREVGEIWVRGPSVAAGYFNEPEATE  425

Query  404  ALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFI---IRGESEQHRTK  460
            A    G+  T DLG+ V  E+ + GR  ++ I+ G+N FP DIE I   + G  + H   
Sbjct  426  AAFGGGWLRTGDLGYTVAGEVYLCGRSKDLIILGGKNYFPQDIERIASSVEGVRDGHCVA  485

Query  461  VACFGVN--ERVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTS  518
             +C      ER +VV E+   S+   A+A  +   V A  G+QL E+  ++RG +  T+S
Sbjct  486  FSCLTAEGAERAIVVAEAK-RSVAGVAQA--ITQAVRAQLGVQLSEVALIKRGTLAKTSS  542

Query  519  GKLKRRAVAQAYRDGTL  535
            GK++RR + + +  G L
Sbjct  543  GKVRRREMKRRFEAGEL  559


>gi|91789248|ref|YP_550200.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
 gi|91698473|gb|ABE45302.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
Length=942

 Score =  209 bits (532),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 183/594 (31%), Positives = 268/594 (46%), Gaps = 72/594 (12%)

Query  3    AALLSPAIAWQQISACTDRTLTITCEDSEV---ISYQDLIARAAACIPPLRRLDLKRGEP  59
            AA L   + W   +      + I   DS     +SY DL   AA     L     + G+P
Sbjct  116  AATLQEVLDWHVRAHPQREHIAIDNGDSAAPTRLSYADLQQGAAGVAAGLLDRGFQPGQP  175

Query  60   VLITAHTNLEFLSCFLGLMLHGAVPVPI-PPREALKTTERFMTRLGPLLRHHRVLICTPA  118
            V +   T  E+   F G++L G +PVPI PP  A +  E     +G L            
Sbjct  176  VALMLPTGPEYFFSFAGILLAGGIPVPIYPPARAAQIEEHLQRHVGIL------------  223

Query  119  EHDEIRAAASTDCQISRFTALAEAGDEQFGR----ATAQQL-ADTATADWPLCTLDDDAY  173
                  A A+    + R   LA     Q        T ++L A TA+ +      +D A 
Sbjct  224  ----TNALATALITVPRARVLATLLKSQVPSLRMVCTVEELSASTASPERVTAHANDIAL  279

Query  174  VQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAAL  233
            +QYTSGST++P+GVV+T+ NLL+N+RAM    Q    DV  SWLPL+HDMGL+G+   +L
Sbjct  280  LQYTSGSTSSPKGVVLTHANLLANLRAMGQALQVSSEDVFVSWLPLYHDMGLIGAWLGSL  339

Query  234  FNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLH  293
            + +   V  +P  FL  P  +L  +     T +  PNF  E  +       A +EG+DL 
Sbjct  340  YYAYPLVVMSPLTFLARPERWLWAVHRHRGTLSGGPNFGYELCLRKLDE--AALEGLDLS  397

Query  294  KMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGF---R  350
              R     +EPV A  M+ F   FA  GL P AL   YGLAEAT+ ++      G    R
Sbjct  398  SWRFAFNGAEPVSATTMQEFQQRFACYGLRPQALAPVYGLAEATLGLTFPPQGRGLLVDR  457

Query  351  TETHAAAE----------------VVTGGRVLPGYEVRIDAAPGA-----RAGTIKLRGD  389
             +T A +                 VV  GR LPG+EVR+  A G      + G +  +G 
Sbjct  458  IDTQAFSHSGRALPAASSTSGVRLVVACGRPLPGHEVRLVDATGCEVAERQEGRLLFKGP  517

Query  390  SVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFI  449
            S  +  +   K+   L +  + D+ D  ++   ++ I GR  +V I  G   +PYD+E  
Sbjct  518  SATSGYFRNPKETRRLFDGEWLDSGDYAYMAQGDVYITGRAKDVIIRGGRQIYPYDLEEA  577

Query  450  IRGESEQHRTKVACFGV------NERVVVVLESPLDSIIDKAEADRLRCQV----VAATG  499
            +       +  VA FG       +ERVVV+ E+    +  +A A +LR Q+    V   G
Sbjct  578  VGAIPSVRKGCVAVFGSPDPMTRSERVVVMAET--RGLPPEALA-QLRRQINSAAVGVLG  634

Query  500  LQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDG----TLP----RLATHAWTA  545
               D+++ V    +  T+SGK++R A  + Y  G    T P    ++A  AW A
Sbjct  635  APPDDVVLVPPHTVLKTSSGKIRRAASRELYETGGASATQPAPWQQIARFAWQA  688


>gi|209363707|ref|YP_001423619.2| acyl-CoA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|207081640|gb|ABS78186.2| acyl-CoA synthetase [Coxiella burnetii Dugway 5J108-111]
Length=936

 Score =  209 bits (532),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 162/549 (30%), Positives = 245/549 (45%), Gaps = 50/549 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            +  +I Y +L  RA      L    LK  E V I   T+ +F   FLG ++ G +PVPI 
Sbjct  138  EETIIRYGELYTRAKEFAQGLVGKGLKPSETVAIMLPTSADFFYSFLGTLMAGGIPVPIY  197

Query  89   PREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQ  146
            P       E +  R   +L +   R LI         RAAA +    S   +L E     
Sbjct  198  PPFRADQIEEYAKREAFILHNAGVRFLITFK------RAAALSKLLQSFVPSLLEV----  247

Query  147  FGRATAQQLADTATADWPLCTLD--DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
                T + L D  +AD P   ++  D   +QYTSGST  P+GV++ + NLL+N+ A    
Sbjct  248  ---TTVKALTDI-SADLPTLDIEATDPVLIQYTSGSTGNPKGVLLNHANLLANISAYGKT  303

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
               Q  D   SWLPL+HDMGL+G+   + ++ +     +P  FL  P  +L  +     T
Sbjct  304  LNMQSTDAFVSWLPLYHDMGLIGAWMGSFYHGLPLTLLSPFTFLSRPEKWLWAIHYHRGT  363

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  PNFA +  +       + +EG+DL   R  +  SE +H + +R F   F   G   
Sbjct  364  ISPGPNFAYDLCVKKIE--DSALEGLDLSSWRVALNGSEMIHPDTLRNFEKRFRKYGFKK  421

Query  325  TALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAEVVTGGRV  365
             A+   YGLAE  + ++    N G                     T      E V+ G V
Sbjct  422  EAIFPAYGLAECALGLTFPPLNRGPNIDRIERLPYEKNNTAVPLTTRDKKYYEFVSCGSV  481

Query  366  LPGYEVRI----DAAPGARA-GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            L G+E+RI    D     R  G I+ +G S     Y   +   A+   G+  T DLG+L 
Sbjct  482  LEGHEIRIVDDNDNRVAERTIGNIQFKGPSAMQGYYRNSEATMAIYHNGWWATGDLGYLA  541

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVL  474
            + E+ I GR+ ++ I  G N  P +IE +        +  VA FGV       E++++V 
Sbjct  542  EGELFITGRKKDLIIKAGRNYHPTEIEAMASLAEGVRKGCVAAFGVADEKRGTEKLIIVA  601

Query  475  ESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGT  534
            E+  D  I       +  +V++  G+  DE++ V    +P T+SGKL+R +  Q Y  G 
Sbjct  602  ETKEDKKIHPEIKKEIVDKVISQIGIPPDEILLVPPHTLPKTSSGKLRRSSCKQDYLAGK  661

Query  535  LPRLATHAW  543
            L R +  A+
Sbjct  662  LSRPSRSAF  670


>gi|212211705|ref|YP_002302641.1| acyl-CoA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212010115|gb|ACJ17496.1| acyl-CoA synthetase [Coxiella burnetii CbuG_Q212]
Length=936

 Score =  209 bits (531),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 162/549 (30%), Positives = 245/549 (45%), Gaps = 50/549 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            +  +I Y +L   A      L    LK  E V I   T+ +F   FLG ++ G +PVPI 
Sbjct  138  EETIIRYGELYTGAKEFAQGLVGKGLKPSETVAIMLPTSADFFYSFLGTLMAGGIPVPIY  197

Query  89   PREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQ  146
            P       E +  R   +L +   R LI         RAAA +    S   +L E     
Sbjct  198  PPFRADQIEEYAKREAFILHNAGVRFLITFK------RAAALSKLLQSFVPSLLEV----  247

Query  147  FGRATAQQLADTATADWPLCTLD--DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
                T + L D  +AD P   ++  D   +QYTSGST  P+GV++ + NLL+N+ A    
Sbjct  248  ---TTVKALTDI-SADLPTLDIEATDPVLIQYTSGSTGNPKGVLLNHANLLANISAYGKT  303

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
               Q  D   SWLPL+HDMGL+G+   + ++ +     +P  FL  P  +L  +     T
Sbjct  304  LNMQSTDAFVSWLPLYHDMGLIGAWMGSFYHGLPLTLLSPFTFLSRPEKWLWAIHYHRGT  363

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  PNFA +  +       +D+EG+DL   R  +  SE +H + +R F   F   G   
Sbjct  364  ISPGPNFAYDLCVKKIE--DSDLEGLDLSSWRVALNGSEMIHPDTLRNFEKRFRKYGFKK  421

Query  325  TALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAEVVTGGRV  365
             A+   YGLAE  + ++    N G                     T      E V+ G V
Sbjct  422  EAIFPAYGLAECALGLTFPPLNRGPNIDRIERLPYEKNNTAVPLTTRDKKYYEFVSCGSV  481

Query  366  LPGYEVRI----DAAPGARA-GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            L G+E+RI    D     R  G I+ +G S     Y   +   A+   G+  T DLG+L 
Sbjct  482  LEGHEIRIVDDNDNRVAERTIGNIQFKGPSAMQGYYRNSEATMAIYHNGWWATGDLGYLA  541

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVL  474
            + E+ I GR+ ++ I  G N  P +IE +        +  VA FGV       E++++V 
Sbjct  542  EGELFITGRKKDLIIRAGRNYHPTEIEAMASLAEGVRKGCVAAFGVADEKRGTEKLIIVA  601

Query  475  ESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGT  534
            E+  D  I       +  +V++  G+  DE++ V    +P T+SGKL+R +  Q Y  G 
Sbjct  602  ETKEDKKIHPEIKKEIVDKVISQIGIPPDEILLVPPHTLPKTSSGKLRRSSCKQDYLAGK  661

Query  535  LPRLATHAW  543
            L R +  A+
Sbjct  662  LSRPSRSAF  670


>gi|212217721|ref|YP_002304508.1| acyl-CoA synthetase [Coxiella burnetii CbuK_Q154]
 gi|212011983|gb|ACJ19363.1| acyl-CoA synthetase [Coxiella burnetii CbuK_Q154]
Length=936

 Score =  209 bits (531),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 162/549 (30%), Positives = 244/549 (45%), Gaps = 50/549 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            +  +I Y +L  RA      L    LK  E V I   T+ +F   FLG ++ G +PVPI 
Sbjct  138  EETIIRYGELYTRAKEFAQGLVGKGLKPSETVAIMLPTSADFFYSFLGTLMAGGIPVPIY  197

Query  89   PREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQ  146
            P       E +  R   +L +   R LI         RAAA +    S   +L E     
Sbjct  198  PPFRADQIEEYAKREAFILHNAGVRFLITFK------RAAALSKLLQSFVPSLLEV----  247

Query  147  FGRATAQQLADTATADWPLCTLD--DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
                T + L D  +AD P   ++  D   +QYTSGST  P+GV++ + NLL+N+ A    
Sbjct  248  ---TTVKALTDI-SADLPTLDIEATDPVLIQYTSGSTGNPKGVLLNHANLLANISAYGKT  303

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
               Q  D   SWLPL+HDMGL+G+   + ++ +     +P  FL  P  +L  +     T
Sbjct  304  LNMQSTDAFVSWLPLYHDMGLIGAWMGSFYHGLPLTLLSPFTFLSRPEKWLWAIHYHRGT  363

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  PNFA +  +       + +EG+DL   R  +  SE +H + +R F   F   G   
Sbjct  364  ISPGPNFAYDLCVKKIE--DSALEGLDLSSWRVALNGSEMIHPDTLRNFEKRFRKYGFKK  421

Query  325  TALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAEVVTGGRV  365
             A+   YGLAE    ++    N G                     T      E V+ G V
Sbjct  422  EAIFPAYGLAECAFGLTFPPLNRGPNIDRIERLPYEKNNTAVPLTTRDKKYYEFVSCGSV  481

Query  366  LPGYEVRI----DAAPGARA-GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            L G+E+RI    D     R  G I+ +G S     Y   +   A+   G+  T DLG+L 
Sbjct  482  LEGHEIRIVDDNDNRVAERTIGNIQFKGPSAMQGYYGNSEATMAIYHNGWWATGDLGYLA  541

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVL  474
            + E+ I GR+ ++ I  G N  P +IE +        +  VA FGV       E++++V 
Sbjct  542  EGELFITGRKKDLIIKAGRNYHPTEIEAMASLAEGVRKGYVAAFGVADEKRGTEKLIIVA  601

Query  475  ESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGT  534
            E+  D  I       +  +V++  G+  DE++ V    +P T+SGKL+R +  Q Y  G 
Sbjct  602  ETKEDKKIHPEIKKEIVDKVISQIGIPPDEILLVPPHTLPKTSSGKLRRSSCKQDYLAGK  661

Query  535  LPRLATHAW  543
            L R +  A+
Sbjct  662  LSRPSRSAF  670


>gi|165918760|ref|ZP_02218846.1| acyltransferase family protein [Coxiella burnetii RSA 334]
 gi|165917588|gb|EDR36192.1| acyltransferase family protein [Coxiella burnetii RSA 334]
Length=853

 Score =  209 bits (531),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 161/549 (30%), Positives = 244/549 (45%), Gaps = 50/549 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            +  +I Y +L  RA      L    LK  E V I   T+ +F   FLG ++ G +PVPI 
Sbjct  55   EETIIRYGELYTRAKEFAQGLVGKGLKPSETVAIMLPTSADFFYSFLGTLMAGGIPVPIY  114

Query  89   PREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQ  146
            P       E +  R   +L +   R LI         RAAA +    S   +L E     
Sbjct  115  PPFRADQIEEYAKREAFILHNAGVRFLITFK------RAAALSKLLQSFVPSLLEV----  164

Query  147  FGRATAQQLADTATADWPLCTLD--DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
                T + L D  +AD P   ++  D   +QYTSGST  P+GV++ + NLL+N+ A    
Sbjct  165  ---TTVKALTDI-SADLPTLDIEATDPVLIQYTSGSTGNPKGVLLNHANLLANISAYGKT  220

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
               Q  D   SWLPL+HDMGL+G+   + ++ +     +P  FL  P  +L  +     T
Sbjct  221  LNMQSTDAFVSWLPLYHDMGLIGAWMGSFYHGLPLTLLSPFTFLSRPEKWLWAIHYHRGT  280

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  PNFA +  +       + +EG+DL   R  +  SE +H + +R F   F   G   
Sbjct  281  ISPGPNFAYDLCVKKIE--DSALEGLDLSSWRVALNGSEMIHPDTLRNFEKRFRKYGFKK  338

Query  325  TALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAEVVTGGRV  365
             A+   YGLAE  + ++    N G                     T      E V+ G V
Sbjct  339  EAIFPAYGLAECALGLTFPPLNRGPNIDRIERLPYEKNNTAVPLTTRDKKYYEFVSCGSV  398

Query  366  LPGYEVRIDAAPGARA-----GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            L G+E+RI      R      G I+ +G S     Y   +   A+   G+  T DLG+L 
Sbjct  399  LEGHEIRIVDDNDNRVAERTIGNIQFKGPSAMQGYYGNSEATMAIYHNGWWATGDLGYLA  458

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVL  474
            + E+ I GR+ ++ I  G N  P +IE +        +  VA FGV       E++++V 
Sbjct  459  EGELFITGRKKDLIIKAGRNYHPTEIEAMASLAEGVRKGCVAAFGVADEKRGTEKLIIVA  518

Query  475  ESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGT  534
            E+  D  I       +  +V++  G+  DE++ V    +P T+SGKL+R +  Q Y  G 
Sbjct  519  ETKEDKKIHPEIKKEIVDKVISQIGIPPDEILLVPPHTLPKTSSGKLRRSSCKQDYLAGK  578

Query  535  LPRLATHAW  543
            L R +  A+
Sbjct  579  LSRPSRSAF  587


>gi|153206239|ref|ZP_01945502.1| acyltransferase family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|120577369|gb|EAX33993.1| acyltransferase family protein [Coxiella burnetii 'MSU Goat Q177']
Length=853

 Score =  209 bits (531),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 162/549 (30%), Positives = 244/549 (45%), Gaps = 50/549 (9%)

Query  29   DSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP  88
            +  +I Y +L  RA      L    LK  E V I   T+ +F   FLG ++ G +PVPI 
Sbjct  55   EETIIRYGELYTRAKEFAQGLVGKGLKPSETVAIMLPTSADFFYSFLGTLMAGGIPVPIY  114

Query  89   PREALKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQ  146
            P       E +  R   +L +   R LI         RAAA +    S   +L E     
Sbjct  115  PPFRADQIEEYAKREAFILHNAGVRFLITFK------RAAALSKLLQSFVPSLLEV----  164

Query  147  FGRATAQQLADTATADWPLCTLD--DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
                T + L D  +AD P   ++  D   +QYTSGST  P+GV++ + NLL+N+ A    
Sbjct  165  ---TTVKALTDI-SADLPTLDIEATDPVLIQYTSGSTGNPKGVLLNHANLLANISAYGKT  220

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
               Q  D   SWLPL+HDMGL+G+   + ++ +     +P  FL  P  +L  +     T
Sbjct  221  LNMQSTDAFVSWLPLYHDMGLIGAWMGSFYHGLPLTLLSPFTFLSRPEKWLWAIHYHRGT  280

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  PNFA +  +       + +EG+DL   R  +  SE +H + +R F   F   G   
Sbjct  281  ISPGPNFAYDLCVKKIE--DSALEGLDLSSWRVALNGSEMIHPDTLRNFEKRFRKYGFKK  338

Query  325  TALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAEVVTGGRV  365
             A+   YGLAE    ++    N G                     T      E V+ G V
Sbjct  339  EAIFPAYGLAECAFGLTFPPLNRGPNIDRIERLPYEKNNTAVPLTTRDKKYYEFVSCGSV  398

Query  366  LPGYEVRI----DAAPGARA-GTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLV  420
            L G+E+RI    D     R  G I+ +G S     Y   +   A+   G+  T DLG+L 
Sbjct  399  LEGHEIRIVDDNDNRVAERTIGNIQFKGPSAMQGYYGNSEATMAIYHNGWWATGDLGYLA  458

Query  421  DDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVL  474
            + E+ I GR+ ++ I  G N  P +IE +        +  VA FGV       E++++V 
Sbjct  459  EGELFITGRKKDLIIKAGRNYHPTEIEAMASLAEGVRKGYVAAFGVADEKRGTEKLIIVA  518

Query  475  ESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGT  534
            E+  D  I       +  +V++  G+  DE++ V    +P T+SGKL+R +  Q Y  G 
Sbjct  519  ETKEDKKIHPEIKKEIVDKVISQIGIPPDEILLVPPHTLPKTSSGKLRRSSCKQDYLAGK  578

Query  535  LPRLATHAW  543
            L R +  A+
Sbjct  579  LSRPSRSAF  587


>gi|288941226|ref|YP_003443466.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Allochromatium 
vinosum DSM 180]
 gi|288896598|gb|ADC62434.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Allochromatium 
vinosum DSM 180]
Length=947

 Score =  209 bits (531),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 166/517 (33%), Positives = 237/517 (46%), Gaps = 49/517 (9%)

Query  54   LKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVL  113
            LK G  V I   T L++   F G+++ G VPVPI P    +  E        L RH R+L
Sbjct  183  LKSGGTVAIMLPTGLDYFFAFFGVLIAGGVPVPIYPPARPQQLEDH------LRRHARLL  236

Query  114  ----ICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLD  169
                +C      E R  A         +A   +  E     T  + A  + ADW      
Sbjct  237  DNAGVCVLITVSEARHVARL------LSAQVPSLHEILTLETPDETAPLSRADWAAPNAG  290

Query  170  DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSL  229
            D A++QYTSGST  P+GV++T+ +LL+N+RAM         DV  SWLPL+HDMGL+G+ 
Sbjct  291  DLAFLQYTSGSTGDPKGVMLTHADLLANIRAMGEAIAIAPDDVFVSWLPLYHDMGLIGAW  350

Query  230  FAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEG  289
              +L+  V  +  +P  FL  P  +L+ +++   T +  PNFA E  +       + +EG
Sbjct  351  LGSLYFGVPLIVMSPLAFLARPRRWLQAISAHRGTLSAAPNFAYELCLTRLS--DSQLEG  408

Query  290  IDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGF  349
            +DL   RR    +EPV AE + RFA  FA  GL P AL   YGLAEA V ++      G 
Sbjct  409  LDLRSWRRAFNGAEPVSAETLHRFAERFAPCGLRPEALAPVYGLAEAAVGLAFPPVERGP  468

Query  350  RTET-------------------HAAAEVVTGGRVLPGYEVRI-----DAAPGARAGTIK  385
            R +                      A  VV  GR LPGY VR+        P    G ++
Sbjct  469  RIDCIDRARFAGSGYALPVACDDPDAMAVVACGRPLPGYRVRVVDESGRERPERHEGLLQ  528

Query  386  LRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYD  445
             +G S     Y   +    L  +G+ +T D  +L   +I + GR  ++ I  G N +PY+
Sbjct  529  FQGPSATQGYYRHPEATARLIRDGWHETGDRAYLAGGDIHLTGRVKDLIIRGGRNLYPYE  588

Query  446  IEFIIRGESEQHRTKVACFGV------NERVVVVLESP-LDSIIDKAEADRLRCQVVAAT  498
            +E  +   +   R  V  F        +ER+V+V ES   D     A A R R +     
Sbjct  589  VEQALGELTGIRRGCVVAFAARDARQGSERLVIVAESKERDPERRAALAQRARERATEVL  648

Query  499  GLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTL  535
            GL  DE++     A+  T+SGKL+R    + Y  G L
Sbjct  649  GLPPDEIVLAPPRAVLKTSSGKLRRGDTRERYLAGRL  685


>gi|224824125|ref|ZP_03697233.1| AMP-dependent synthetase and ligase [Lutiella nitroferrum 2002]
 gi|224603544|gb|EEG09719.1| AMP-dependent synthetase and ligase [Lutiella nitroferrum 2002]
Length=914

 Score =  208 bits (530),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 162/534 (31%), Positives = 249/534 (47%), Gaps = 45/534 (8%)

Query  33   ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREA  92
            I Y++L     A    L    +  GE + +   T L +L+ F+G+ML G +PVPI P   
Sbjct  128  IRYRELFEAGRAIAGGLAARGVTPGETIALMLPTGLGYLASFIGVMLAGGIPVPIYPPTR  187

Query  93   LKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQF-GRAT  151
            L   +  + R   +L +  V++              T  Q      L  A      G  T
Sbjct  188  LSQLDEHLRRHARILNNAAVVLMI------------TTQQAKPVATLLRANVASLAGAVT  235

Query  152  AQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGD  211
             ++LA          T  + A++QYTSGST  P+GV++++ NLL+N+RAM         D
Sbjct  236  TEELAGETDRRPFQGTSSELAFLQYTSGSTGDPKGVMLSHANLLANIRAMGQVIGITAED  295

Query  212  VMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNF  271
            V  SWLPL+HDMGL+G+   +L++    V      FL  P  +L+ ++   AT +  PNF
Sbjct  296  VGVSWLPLYHDMGLIGAWLGSLYHGCPLVLLPTLSFLAQPARWLQAVSRHHATLSGAPNF  355

Query  272  ALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGY  331
            A E  + A     ++++G+DL   R     +EPV    + RFAA FA  G   TAL   Y
Sbjct  356  AYE--LCARKTADSELQGLDLSHWRFAFNGAEPVSPATLERFAARFAPCGFQRTALTPVY  413

Query  332  GLAEATVAVSMSAPNTG----------FRT--------ETHAAAEVVTGGRVLPGYEVRI  373
            GLAE+TVA++      G          F T        + HAA  + + GR LP +E+RI
Sbjct  414  GLAESTVALAFPPLGRGPLIDLIAAEPFATSGQALPAQDDHAALRIPSCGRPLPNHEIRI  473

Query  374  -----DAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILG  428
                    P  + G ++ RG S     Y       AL  +G+ D+ D  ++ + E+ + G
Sbjct  474  VGEDGSELPERQVGRLEFRGPSATRGYYHNPTASTALFHDGWLDSGDNAYMAEGEVYLTG  533

Query  429  RQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVLESPLDSII  482
            R  ++ I  G N +PYD+E  I       +  VA F        +ER+VV+ E+      
Sbjct  534  RVKDLIIRAGRNFYPYDLEEAIGNLPGIRKGCVAVFASADPHQGSERLVVLAETREQGSA  593

Query  483  DKAEADRLRCQVVA-ATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTL  535
             + +  +L  Q  A   G+ LDE++      +  T+SGK++R+A   AY  G +
Sbjct  594  AREQLHQLIRQTAADVVGVPLDEIVLAPPHTVLKTSSGKIRRQACRAAYEQGMV  647


>gi|344341519|ref|ZP_08772438.1| AMP-dependent synthetase and ligase [Thiocapsa marina 5811]
 gi|343798639|gb|EGV16594.1| AMP-dependent synthetase and ligase [Thiocapsa marina 5811]
Length=926

 Score =  207 bits (527),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 174/538 (33%), Positives = 246/538 (46%), Gaps = 45/538 (8%)

Query  30   SEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPI-P  88
            ++ ISY+ L   AA     L+   L+ G  V +   T  ++ + F G+++ G VPVPI P
Sbjct  139  AQRISYRSLADGAARVAARLQAAGLRPGSTVALMLPTGSDYFNSFFGVLMAGGVPVPIYP  198

Query  89   PREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFG  148
            P    +  E        L RH R+L    A        A    ++ R    +  G     
Sbjct  199  PSRPQQIEEH-------LRRHARILDNAGATFLITVPEARAIGRVLRVQVRSLRGIVTLE  251

Query  149  RATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQ  208
                +  ++T     P     D A++QYTSGST  P+GVV+T+ +LL+N+RAM    Q  
Sbjct  252  GLEQETPSETRARPAP----QDIAFLQYTSGSTGDPKGVVLTHADLLANIRAMGEVVQVA  307

Query  209  HGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFM  268
              DV  SWLPL+HDMGL+G+   +L+  +  V  +P  FL  P+ +L  +   G T +  
Sbjct  308  PDDVFVSWLPLYHDMGLIGAWLGSLYYGIPLVSMSPLAFLARPVRWLEAIHRHGGTISAA  367

Query  269  PNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALG  328
            PNFA E  +       A I  +DL + R  +  +EPV  E +RRFAA FA  GL   AL 
Sbjct  368  PNFAYELCLTRIT--DAQIADLDLSRWRWALNGAEPVSPETLRRFAARFAPAGLRSEALA  425

Query  329  SGYGLAEATVAVSMSAPNTGFRT-------------------ETHAAAEVVTGGRVLPGY  369
              YGLAEA V ++      G R                    E   A EVV  GR LPGY
Sbjct  426  PVYGLAEAAVGLAFPPAGRGPRIDCIDRDRFARAGYALPVGCEDPQAMEVVACGRALPGY  485

Query  370  EVR-IDAA----PGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEI  424
             VR +D A    P    G ++ +G S     Y       AL  +G+  T D  +L   +I
Sbjct  486  RVRVVDEAGRERPERHEGLLEFQGPSATRGYYRNPAATQALIRDGWHSTGDRAYLAGGDI  545

Query  425  VILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------NERVVVVLESP-  477
             + GR  ++ I  G N +PY++E  +       +  V  F        +ER+V++ ES  
Sbjct  546  HLTGRVKDLIIRGGRNIYPYEVEEALGKVDGVRKGCVVAFAALDPELGSERLVILAESKE  605

Query  478  LDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTL  535
             D       A RLR +     GL  DEL+ V   A+  T+SGKL+R A    Y  G L
Sbjct  606  RDPARRAELARRLRERATDVLGLPPDELLLVPPRAVLKTSSGKLRRAATRDRYLAGRL  663


>gi|167567182|ref|ZP_02360098.1| AMP-binding domain protein [Burkholderia oklahomensis EO147]
Length=693

 Score =  207 bits (526),  Expect = 5e-51, Method: Compositional matrix adjust.
 Identities = 172/547 (32%), Positives = 255/547 (47%), Gaps = 54/547 (9%)

Query  33   ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREA  92
            ++Y +L  RA+     LR   +  G+ V +   T L++   F  ++  GA+PVPI P   
Sbjct  149  LTYGELYRRASDMASGLRERGIDPGDTVALMLPTGLDYFVSFAAILFCGAIPVPIYPPAN  208

Query  93   LKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATA  152
            L   +  + R  P+L + R+           R A S    I++   L  +  +     T 
Sbjct  209  LAQLDEHVGRHTPILENARIKALI-----AFRPAVS----IAQLLKLRVSTLQHV--LTP  257

Query  153  QQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDV  212
            +Q+A  A         DD A +QYTSGST  P+GV++++ NLL+N+RAM    +    DV
Sbjct  258  EQIAGRAHLPPFRAAADDVALLQYTSGSTGTPKGVMLSHANLLANIRAMGDRMRVDASDV  317

Query  213  MGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFA  272
            + SWLPL+HDMGL+G+  A L+  + A+  +P  FL  P  +LR ++    T T  PNFA
Sbjct  318  LVSWLPLYHDMGLIGAWLAPLYFGIPAIVMSPVVFLARPALWLRAISRYRGTITAAPNFA  377

Query  273  LEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYG  332
             E    A H    +    DL  +R     +EPV+ + +R FAA FA  G    AL   YG
Sbjct  378  YERC--ARHLAALEPTEFDLSSLRFAFCGAEPVNPDTLRAFAARFASCGFDARALTPVYG  435

Query  333  LAEATVAVSMSAPNTGFRTETHAAAEVVTGGRVLP------------------GYEVRID  374
            LAE T+ ++  AP  G R +  A   +   GR  P                  G E+RI 
Sbjct  436  LAENTLGLTFPAPALGLRVDRVAREPLSASGRATPAPGDANALDVPSCGYPLDGTELRI-  494

Query  375  AAPGAR------AGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILG  428
               G R       G I+ RG S     Y    +   L  + + DT DLG++ D E+ I G
Sbjct  495  VDDGEREVAERQVGRIEFRGTSATRGYYRNPAQTARLFHDSWRDTGDLGYVADGELYITG  554

Query  429  RQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVA-CFGVN-----ERVVVVLESPLDSII  482
            R  ++ I  G++ FPY++E  I          VA C G +     ERVV+++ES      
Sbjct  555  RAKDMIIRGGQHFFPYELEEAIERLPGAVTGGVAVCGGADPVSGTERVVILVES---DAT  611

Query  483  DKAEADRLRCQVVAAT----GLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRD--GTLP  536
            D A  +RLR  V   T    G+  +++  V    I  T SGK++  A  + +    G LP
Sbjct  612  DDAVCERLRASVNDVTAALWGMPAEQVSIVAPHGILKTPSGKIRHAATLEKFERHAGRLP  671

Query  537  RLATHAW  543
            + A  +W
Sbjct  672  Q-APASW  677


>gi|89900929|ref|YP_523400.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens 
T118]
 gi|89345666|gb|ABD69869.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens 
T118]
Length=958

 Score =  207 bits (526),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 167/552 (31%), Positives = 253/552 (46%), Gaps = 50/552 (9%)

Query  20   DRTLTITCEDSEV---ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLG  76
            DR L    E+ +    + Y +L   A A    LR L L +G+ V I   T  EF + F G
Sbjct  155  DRVLITLYENGDQAVDLRYAELHREAVALAAGLRALGLDKGDKVAIMLPTGREFFAAFFG  214

Query  77   LMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRF  136
             +  G VPVP+ P       E  + R+  ++R+ +  +    E       A    Q+ R 
Sbjct  215  TLYAGLVPVPLYPPARPSQLEDHLKRIAAIVRNAQARVLVTVER------AKPLSQLLR-  267

Query  137  TALAEAGDEQFGRATAQ-QLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLL  195
               A+A   QF R  A   LAD      P  T  D A++QYTSGST  P+GV++T+ NLL
Sbjct  268  ---AQAEALQFVRTVADLSLADAPRMQ-PALTASDIAFLQYTSGSTGDPKGVILTHANLL  323

Query  196  SNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFL  255
            +N+RAM   SQ    D   SWLPL+HDMGL+G+   AL+     V  +P  FL  P  +L
Sbjct  324  ANLRAMWRASQVGSSDTFVSWLPLYHDMGLIGACLGALYLGFHLVLMSPLAFLARPARWL  383

Query  256  RLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAA  315
              +     T +  PNFA E  ++      A++ G+DL   R     +EPV  + + RFAA
Sbjct  384  ETIHRHRGTVSAAPNFAYELCLSKLT--DAELAGLDLSCWRLAFNGAEPVSPDTLERFAA  441

Query  316  TFAGVGLAPTALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAA  356
             FA       AL   YGLAE TV ++      G                    R +   A
Sbjct  442  RFAPCSFKREALTPVYGLAENTVGLAFGPVGRGPLVDRVDRAALARDGVAEPARPDDAQA  501

Query  357  AEVVTGGRVLPGYEVRIDAA-----PGARAGTIKLRGDSVAAKAYVGGKKLDALDEEG-F  410
              +V+ G  LPG+E+R+  A     P    G ++ RG S + + Y+     +    +G +
Sbjct  502  LRIVSCGSPLPGHELRVVGAGGRELPEREQGRVQFRGPS-STQGYLNNPVANQRLLDGDW  560

Query  411  CDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV----  466
             +T DLG++   E+ + GR+ ++ I  G N  P ++E  +   +   +  VA F      
Sbjct  561  LNTGDLGYIAAAELFLTGREKDIIIRGGFNIHPQELESAVANIAGVRKGGVAVFAATDRR  620

Query  467  --NERVVVVLESPLDSIIDKAEADRLRCQVVAA-TGLQLDELITVRRGAIPTTTSGKLKR  523
               ER+VV+ E+ +     +A+  R    + A   G   D+++     ++  T+SGK +R
Sbjct  621  SGTERLVVLAETRVREPAQRAQMIRAITALSATLLGAPADDVVLAPPRSVLKTSSGKTRR  680

Query  524  RAVAQAYRDGTL  535
             A  + Y  G L
Sbjct  681  AACRELYEQGRL  692


>gi|121595383|ref|YP_987279.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
 gi|120607463|gb|ABM43203.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length=653

 Score =  206 bits (525),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 179/563 (32%), Positives = 266/563 (48%), Gaps = 67/563 (11%)

Query  16   SACTDRTLTITCEDSE--VISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSC  73
            +A  DR +T+   D E  V+S+Q L  RA A +  L+R  +  G+ +++    N  FL  
Sbjct  13   TARDDRQITLIEGDKEQRVLSFQRLRQRALAVLGALQRQSIAPGDTMILCLADNERFLEM  72

Query  74   FLGLMLHGAVPVPIPP------REALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAA  127
            F   +L G VPVP+ P      R+ L    R   +LGP  +    +  T  E  +  AAA
Sbjct  73   FWACVLGGIVPVPLAPGATDAHRQKLL---RVFAQLGP--KASVYIDRTSLERLDGFAAA  127

Query  128  S--TDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPR  185
                D   +        G    G    Q ++            DD A++QY+SGST  P+
Sbjct  128  QGLADQAAALRARALVPGGLDIGGEPGQPVSPRP---------DDLAFIQYSSGSTGEPK  178

Query  186  GVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPH  245
            GV++T+RNL +N+ A+   + F   DV  SW+PL HDMGL+G     L    S       
Sbjct  179  GVLLTHRNLCANIAAIIEAAAFSDRDVALSWMPLSHDMGLIGFHLNMLACGASHAIMRTD  238

Query  246  RFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPV  305
             F   PL +L   +   AT    PNF  +  +  +  +    +G+DL  +R +   +EP+
Sbjct  239  LFARRPLLWLDQASQRRATVLCSPNFGYQHYLRQFALKPP--QGLDLSAVRLIFNGAEPI  296

Query  306  HAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRT--------------  351
             A+  RRF    A  GL P A+   YGLAEA++AVS   P+T   T              
Sbjct  297  SADLCRRFTQAMAPHGLQPNAMFPVYGLAEASLAVSFPPPSTPLETIELDRTALRVGAPV  356

Query  352  ------ETHAAAEVVTGGRVLPGYEVRI--DAAPGA---RAGTIKLRGDSVAAKAYVGGK  400
                   TH A E V  GR +PG E+RI  DA  G      G +++RGD+V+   Y   +
Sbjct  357  RAAAPGSTH-AIEFVKLGRAVPGCEIRIVDDAGTGLADRTVGHVQIRGDNVSG-GYFRDR  414

Query  401  KLDALDE--EGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHR  458
              +       G+ DT DLG ++D ++VI GR  ++ IV+G+N +P D+E I +       
Sbjct  415  SGNGASRVTPGWLDTGDLGVMLDGQLVITGRAKDLIIVNGQNYYPTDLEEIAQQVPGIEA  474

Query  459  TKVACFGVNE--------RVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRR  510
             +VA  GV +         + V+    L   + K +A  LR  +   T L+L+ ++ V  
Sbjct  475  NRVAAVGVRDASEGTESVALFVIHRGDLAGFVPKVQA--LRRIIGQQTDLELNHIVPV--  530

Query  511  GAIPTTTSGKLKRRAVAQAYRDG  533
             AIP TTSGKL+R A+A A+  G
Sbjct  531  SAIPKTTSGKLQRYALALAFEQG  553


>gi|167572594|ref|ZP_02365468.1| AMP-binding domain protein [Burkholderia oklahomensis C6786]
Length=934

 Score =  206 bits (524),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 175/571 (31%), Positives = 259/571 (46%), Gaps = 59/571 (10%)

Query  33   ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREA  92
            ++Y +L  RA+     LR   +  G+ V +   T  ++   F  ++  GA+PVPI P   
Sbjct  136  LTYGELYRRASDMASGLRERGIDPGDTVALMLPTGFDYFVSFAAILFCGAIPVPIYPPAN  195

Query  93   LKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATA  152
            L   +  + R  P+L + R+     A    +  A     ++S    +           T 
Sbjct  196  LAQLDEHVGRHTPILENARIKALI-AFRPAVSIAQLLKLRVSTLQHVL----------TP  244

Query  153  QQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDV  212
            +Q+A  A         DD A +QYTSGST  P+GV++++ NLL+N+RAM    +    DV
Sbjct  245  EQIAGRAHLPPFRAAADDVALLQYTSGSTGTPKGVMLSHANLLANIRAMGDRMRVDASDV  304

Query  213  MGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFA  272
            + SWLPL+HDMGL+G+  A L+  + A+  +P  FL  P  +LR ++    T T  PNFA
Sbjct  305  LVSWLPLYHDMGLIGAWLAPLYFGIPAIVMSPVVFLARPALWLRAISRYRGTITAAPNFA  364

Query  273  LEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYG  332
             E    A H    +    DL  +R     +EPV+ + +R FAA FA  G     L   YG
Sbjct  365  YERC--ARHLAALEPTEFDLSSLRFAFCGAEPVNPDTLRAFAARFASCGFDARVLTPVYG  422

Query  333  LAEATVAVSMSAPNTGFRTETHAAAEVVTGGRVLP------------------GYEVRID  374
            LAE T+ ++  AP  G R +  A   +   GR  P                  G E+RI 
Sbjct  423  LAENTLGLTFPAPALGLRVDRVAREPLSASGRATPAPGDANALDVPSCGYPLDGTELRI-  481

Query  375  AAPGAR------AGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILG  428
               G R       G I+ RG S     Y    +   L  + + DT DLG++ D E+ I G
Sbjct  482  VDDGEREVAERQVGRIEFRGTSATRGYYRNPTQTARLFHDSWRDTGDLGYVADGELYITG  541

Query  429  RQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVA-CFGVN-----ERVVVVLESPLDSII  482
            R  ++ I  G++ FPY++E  I          VA C G +     ERVV+++ES      
Sbjct  542  RAKDMIIRGGQHFFPYELEEAIERLPGAVTGGVAVCGGADPVSGTERVVILVES---DAT  598

Query  483  DKAEADRLRCQV----VAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRD--GTLP  536
            D A  +RLR  V     A  G+  +++  V    I  T SGK++  A  + +    G LP
Sbjct  599  DDAACERLRASVNDVTAALWGMPAEQVSIVAPHGILKTPSGKIRHAATLEQFERHAGRLP  658

Query  537  RLATHAWTADPD-----SAPKTTRSSLEGAH  562
            + A  +W    D      AP   R+S   AH
Sbjct  659  Q-APASWRQFADLAAGSVAPFGRRASRRAAH  688


>gi|296170910|ref|ZP_06852447.1| AMP-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894459|gb|EFG74203.1| AMP-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=933

 Score =  204 bits (520),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 182/579 (32%), Positives = 263/579 (46%), Gaps = 58/579 (10%)

Query  2    TAALLSPAIAWQQISACTDRT-LTIT-----CEDSEVISYQDLIARAAACIPPLRRLDLK  55
            +A  L+  + W  + A  DRT L I        D   ++Y  L   AAA    L   D+ 
Sbjct  111  SALTLNDVLNWH-VGATPDRTHLRILDDAGGAPDGADMTYSALHRGAAAVASGLIAHDVM  169

Query  56   RGEPVLITAHTNLEFLSCFLGLMLHGAVPVPI-PPREALKTTERFMTRLGPLLRHHRVLI  114
             G+ V I   T  E+   F G+ L GAVPVP+ PP    +  +      G L      ++
Sbjct  170  PGQAVAIMLPTCREYFVTFAGVALAGAVPVPVYPPSRPSQLADHLRRTAGILANAGATML  229

Query  115  CTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYV  174
             T  E   +     ++ +  R   +AE         T  +  + AT   P     D A V
Sbjct  230  VTVPEAVTLGHLLRSNVESLRHVVVAE---------TLTRAGEHATTPLPRPRAGDLALV  280

Query  175  QYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALF  234
            QYTSGST  P+GV +T+ NLL+N+RAM   +     D   SWLPL+HDMGL+G+    ++
Sbjct  281  QYTSGSTGQPKGVALTHHNLLANIRAMGRAAAATGADTFVSWLPLYHDMGLIGAWLGCMY  340

Query  235  NSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHK  294
              V  V  +P  FL  P  +L  +  + A+ +  PNFA E  ++    R  +IEG+DL  
Sbjct  341  FGVPLVVMSPQAFLMRPSRWLWAIHDNRASMSAGPNFAYELCLSKI--RDDEIEGLDLSC  398

Query  295  MRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTG------  348
             R     +EPV A  + RF   FA  G    A+   YGLAE++V ++      G      
Sbjct  399  WRLAYNGAEPVSAATIERFGDRFAPYGFRREAMTPVYGLAESSVGLAFPPLGRGPLIDRI  458

Query  349  --------FRTETHAAAE----VVTGGRVLPGYEVRIDAAPGA-----RAGTIKLRGDSV  391
                     R E     E     V  GR LPG+E+RI  A G      R G ++ RG S 
Sbjct  459  RRDAFARSGRAEPARPGERDLRFVACGRPLPGHEIRILDAAGNELGDRREGRVEFRGPSA  518

Query  392  AAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIR  451
             A  +       AL    + DT DLG+ V+ ++ + GR  +V I  G N  P ++E  + 
Sbjct  519  TAGYFNNPAATRALFHGDWLDTGDLGYTVEADLYVTGRIKDVIIRAGRNLHPAELEEAVG  578

Query  452  GESEQHRTKVACF------GVNERVVVVLESPLDSIIDKAEADRLRCQVVAAT----GLQ  501
                  +  VA F      G  ER+VV+ E+   +I D A A  LR ++ +AT    G+ 
Sbjct  579  NIGGVRKGCVAVFASPDPSGGPERLVVLAET--RAIRDDARAA-LRSEIASATVDLLGVA  635

Query  502  LDELITVRRGAIPTTTSGKLKR---RAVAQAYRDGTLPR  537
             DE++      +  T+SGK++R   R + QA R G  PR
Sbjct  636  PDEVVLAPPRTVLKTSSGKIRRAASRGLYQAGRIGARPR  674


>gi|71068219|gb|AAZ23074.1| acyl-CoA ligase [Streptomyces fradiae]
Length=732

 Score =  204 bits (519),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 176/553 (32%), Positives = 258/553 (47%), Gaps = 78/553 (14%)

Query  34   SYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHG--AVPVPIPPRE  91
            ++ D  AR  A +  LR   L+ G  VL+    + EF + + G +  G  AVP P+P   
Sbjct  93   AWLDDTARRIAVL--LRAAGLETGARVLLLFPQSAEFAAAYAGCLYAGMVAVPAPLP---  147

Query  92   ALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAG-------D  144
                T     R+        V I   +E   +   + T+  + ++ A    G       D
Sbjct  148  --TGTSHEAARV--------VGIAKDSEAGAVLTVSETEADVRQWAARTGLGALPLHCVD  197

Query  145  EQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVG  204
            E  G A      D  T   P    D  A +QYTSGST +P+GVV+T+  L  N+R++  G
Sbjct  198  ELPGDA------DPDTWREPEIRADTVAVLQYTSGSTGSPKGVVVTHGALADNVRSLLTG  251

Query  205  SQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGAT  264
                 G  +G WLP++HDMGL G L  ALF+  +AV  +   FL  P  +LRL+   G  
Sbjct  252  FDLGSGARLGGWLPMYHDMGLFGLLSPALFSGGAAVLMSGSAFLRRPSQWLRLIDRFGLV  311

Query  265  HTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAP  324
             +  P+FA ++ +     R  + +G+DL + R     SEP+ AE +R FA  FA  GL P
Sbjct  312  FSAAPDFAYDYCVRRV--RPEETDGLDLSRWRWAANGSEPIRAETLRAFAKEFAPAGLHP  369

Query  325  TALGSGYGLAEATVAVSMSAPNTGFRT--------ETH---------AAAEVVTGGRVLP  367
             A    YGLAEAT+ VS+  P    RT        E H          + E+V+ GR  P
Sbjct  370  NATTPCYGLAEATLLVSL--PTGELRTRRVDVAELENHRFVEAAVGRPSREIVSCGRP-P  426

Query  368  GYEVRI------------DAAPGARAGTIKLRGDSVAAKAYVGGKKLDA----LDEEG--  409
              E+R+            D A   R G I++RG SV A+ Y    +  A    +D +G  
Sbjct  427  SLEIRVVDPATGKSVTGGDGAGETRVGEIRVRGASV-ARGYWQKPEATAETFVMDADGSG  485

Query  410  -FCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNE  468
             +  T DLG L + E+ + GR  E+ IVHG N +P+DIE  +R    +     A F ++ 
Sbjct  486  PWLRTGDLGALYEGELYVTGRIKELLIVHGRNIYPHDIEHELRARHAELGAVGAAFSLST  545

Query  469  RV--VVVLESPLDSIIDKAEADR----LRCQVVAATGLQLDELITVRRGAIPTTTSGKLK  522
                VVV+   ++  +   +       LR  +    GL    ++ VRRG IP T+SGK++
Sbjct  546  ESGEVVVVTHEVNPTVRPEQGPELVTALRATLAREFGLAPAGVVLVRRGRIPRTSSGKVQ  605

Query  523  RRAVAQAYRDGTL  535
            RR  A+ +  G L
Sbjct  606  RRLTARLFSTGEL  618


>gi|82701365|ref|YP_410931.1| acyl-CoA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82409430|gb|ABB73539.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis 
ATCC 25196]
Length=608

 Score =  204 bits (519),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 170/535 (32%), Positives = 252/535 (48%), Gaps = 52/535 (9%)

Query  32   VISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPRE  91
            V+ YQ L   A      L RL L RG+ V I A T  EF+  F      G VP  +P   
Sbjct  73   VLPYQALRQNAQTAARQLLRLGLARGDRVAIIADTTPEFVEIFYACRYAGLVPYAMPVPV  132

Query  92   ALKTTERFMTRLGPLLRHHRV-LICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGR-  149
             L +   ++ +L  +L   +       A++ +    A+   Q  R+    E    Q G  
Sbjct  133  NLGSHAVYVRQLRGMLEAGQASAALANADYVDFLKEAAEGSQYLRWVGTPE----QLGEL  188

Query  150  -ATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAV-GSQF  207
             A+  +LA  +         D+ AY+Q+TSGST  PRGVVIT   L+SN++ +   G   
Sbjct  189  PASITELAPNSP--------DEIAYLQFTSGSTRMPRGVVITEGALMSNLQGIVRHGLNI  240

Query  208  QHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTF  267
            + GD   SWLP +HDMGLVG + A +   VS  +     F   PL +LRL++ + AT  F
Sbjct  241  RAGDRCASWLPFYHDMGLVGMVMAPMVAQVSVDYLATRDFAIRPLQWLRLISRNRATVAF  300

Query  268  MPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTAL  327
               F L+  +     R +D+E +DL   R   + +E +  + +R FA  FA  G    A 
Sbjct  301  SQPFGLK--LCTLRVRDSDLEDLDLSSWRAAGVGAEMIRPDTLRNFAEKFAPAGFDARAF  358

Query  328  GSGYGLAEATVAVSMSAPNTGFRT-------------------ETHAAAEVVTGGRVLPG  368
               YGLAE+T+AV+ S    GF++                   E    +E V  GR LPG
Sbjct  359  LPCYGLAESTLAVTFSEVGQGFQSLRVDAATLVDRKMAVRLQVEGRKYSEFVNCGRALPG  418

Query  369  YEVR-IDAA----PGARAGTIKLRGDSVAAKAYVGGKKL-DALDEEGFCDTHDLGFLVDD  422
            + V+ ID A    P  R G++ ++G S+    +   +     L    + DT DLGFL + 
Sbjct  419  HIVKVIDEAGQQLPDLRVGSVLVQGSSIMTGYFNNPEDTGKTLKPGNWLDTGDLGFLFEG  478

Query  423  EIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVNE-----RVVVVLESP  477
            ++ I GR+ +V IV+G N    DIE +   + E    + + FG+ +      +V+V+E  
Sbjct  479  DLYITGRRTDVIIVNGRNIRAQDIEELAEQQPEVRTREASAFGITDANDVTTIVLVIECR  538

Query  478  LDSIIDKAE-ADRLRCQVVAATGLQ-LDELITVRRGAIPTTTSGKLKRRAVAQAY  530
            L SI D+     RL+  V  A G+  L EL+      +P T+SGKL R A  Q +
Sbjct  539  LTSITDRQSLTSRLQRLVYMAFGVNCLVELVPPH--TLPRTSSGKLSRFAARQGF  591


>gi|52842442|ref|YP_096241.1| saframycin Mx1 synthetase B [Legionella pneumophila subsp. pneumophila 
str. Philadelphia 1]
 gi|52629553|gb|AAU28294.1| saframycin Mx1 synthetase B [Legionella pneumophila subsp. pneumophila 
str. Philadelphia 1]
Length=581

 Score =  204 bits (519),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 161/563 (29%), Positives = 256/563 (46%), Gaps = 73/563 (12%)

Query  28   EDSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPI  87
            E  E ++Y+ L   A A    L+    K G+ VL+     L  +  FLG +  G + VPI
Sbjct  34   ELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYAGCIAVPI  93

Query  88   PP---REALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGD  144
             P    + L   +R +T   P      V++   A+H            I +FTA     +
Sbjct  94   YPPAQEKLLDKAQRIVTNSKP------VIVLMIADH------------IKKFTADELNTN  135

Query  145  EQFGRATA---QQLADTATADWPLCTL--DDDAYVQYTSGSTAAPRGVVITYRNLLSNMR  199
             +F +  A   + +    ++ W   ++  +D A++QYTSGST  P+GV++++ NLL N+ 
Sbjct  136  PKFLKIPAIALESIELNRSSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLN  195

Query  200  AMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLT  259
             +          ++ SWLP HHDMGL+G +   ++  + A+  +P  FL +PL +L+ +T
Sbjct  196  KIFTSFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHIT  255

Query  260  SSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAG  319
               AT +  PNFA ++ +     R    EG+DL         +EPV  E M  F   F  
Sbjct  256  KYKATISGSPNFAYDYCVKRI--REEKKEGLDLSSWVTAFNGAEPVREETMEHFYQAFKE  313

Query  320  VGLAPTALGSGYGLAEATVAVSMSAPNTGFRTET-----------HAAAEVVTGGRVL--  366
             G    A    YGLAEAT+ V+   P + ++T T           H A +   G   L  
Sbjct  314  FGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVS  373

Query  367  ---PGYEVRIDAAPGA-------RAGTIKLRGDSVAAKAY----------VGGKKLDALD  406
               P  EV+I   P         + G I ++ +SVA K Y            GK  D   
Sbjct  374  SGNPIQEVKI-IDPDTLIPCDFDQVGEIWVQSNSVA-KGYWNQPEETRHAFAGKIKDDER  431

Query  407  EEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRT-KVACFG  465
               +  T DLGFL ++E+ + GR  ++ I++G+N +P DIEF +      H   K A F 
Sbjct  432  SAIYLRTGDLGFLHENELYVTGRIKDLIIIYGKNHYPQDIEFSLMHSPLHHVLGKCAAFV  491

Query  466  VNE----RVVVVLESPLDSIIDKAEADRLRCQVVAAT----GLQLDELITVRRGAIPTTT  517
            + E    ++ V+ E   +  +D    D L  ++         L++  ++ +   A+P TT
Sbjct  492  IQEEHEYKLTVMCEVK-NRFMDDVAQDNLFNEIFELVYENHQLEVHTIVLIPLKAMPHTT  550

Query  518  SGKLKRRAVAQAYRDGTLPRLAT  540
            SGK++R    +   D TLP +AT
Sbjct  551  SGKIRRNFCRKHLLDKTLPIVAT  573


>gi|182678861|ref|YP_001833007.1| AMP-dependent synthetase and ligase [Beijerinckia indica subsp. 
indica ATCC 9039]
 gi|182634744|gb|ACB95518.1| AMP-dependent synthetase and ligase [Beijerinckia indica subsp. 
indica ATCC 9039]
Length=947

 Score =  203 bits (517),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 159/545 (30%), Positives = 252/545 (47%), Gaps = 49/545 (8%)

Query  23   LTITCEDSEVI---SYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLML  79
            +T+  +DS ++   SY  L A+A      L   D+  G+ V +   T++EF   F  ++ 
Sbjct  145  ITLLQDDSTILDQLSYGRLAAQARQIARGLIARDIGPGDRVALMLPTSIEFFCAFFAILY  204

Query  80   HGAVPVPIPPREALKTTERFMTRLGPLLRH--HRVLICTPAEHDEIRAAASTDCQISRFT  137
             GAVPVPI P       E  + R   +L +   R+LI  P   + +  AA    Q+S   
Sbjct  205  VGAVPVPIYPPMRPSQIEDHLRRQAGILNNAGSRMLITMP---EGLSVAALLRAQLSELE  261

Query  138  ALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSN  197
            ++A    E    A   +L   +T   P+ T    A +QYTSGST  P+GV++++ NLL+N
Sbjct  262  SVASVA-ELMAEAGDMRLPPAST---PVST----ALIQYTSGSTGDPKGVILSHANLLAN  313

Query  198  MRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRL  257
            ++AM    +    DV  SWLPL+HD+GL+G+ F  L+        +P  FL  P  +L  
Sbjct  314  VKAMGAALEANSADVFVSWLPLYHDLGLIGAWFGCLYFGAPLYVMSPLSFLVRPESWLWA  373

Query  258  LTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATF  317
            +    AT +  PNF  E  +       A + G+DL  +R +   +EPV    +RRF   F
Sbjct  374  IHRFRATLSAAPNFGFE--LCTAKIDTAHLTGLDLSSLRAVANGAEPVSPYTLRRFTEKF  431

Query  318  AGVGLAPTALGSGYGLAEATVAVSMSAPNTG-------------------FRTETHAAAE  358
            A  G  P  +   YGLAE  V ++ S    G                    +       E
Sbjct  432  AAFGFRPEVMMPVYGLAENAVGLAFSTLGRGPLIDRIDRNALMSRGVAEPAKANDQNPLE  491

Query  359  VVTGGRVLPGYEVRIDAAPG-----ARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDT  413
            +V  GR LPG+E+RI    G      + G ++ RG S  +  +    K   L  +G+ D+
Sbjct  492  LVACGRPLPGHEIRIVDPAGHEIGDRQEGRLEFRGPSATSGYFCNEAKTRDLIHDGWLDS  551

Query  414  HDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGV------N  467
             D  ++ + ++ I GR  ++ I  G + +P +IE  I       R  VA FG+       
Sbjct  552  GDRAYMAEGDVYITGRIKDIIIRAGRHIYPQEIEDAIATIPGIRRGSVAVFGMTDRVSGT  611

Query  468  ERVVVVLESPLDSIIDKAEADRLRCQVVAAT-GLQLDELITVRRGAIPTTTSGKLKRRAV  526
            ER+V+V E+       + E +    ++ +A  G   DE++      +P T+SGK++R A 
Sbjct  612  ERLVIVAETRETDPAARHEIETRAHELTSAICGTPPDEVVLAPPRTVPKTSSGKIRRSAT  671

Query  527  AQAYR  531
             + Y+
Sbjct  672  RELYQ  676


>gi|296445080|ref|ZP_06887041.1| AMP-dependent synthetase and ligase [Methylosinus trichosporium 
OB3b]
 gi|296257501|gb|EFH04567.1| AMP-dependent synthetase and ligase [Methylosinus trichosporium 
OB3b]
Length=934

 Score =  202 bits (514),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 154/524 (30%), Positives = 234/524 (45%), Gaps = 49/524 (9%)

Query  53   DLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHH--  110
            D++ G+ + +   T L+F   F  ++  GAVPVPI P   L   E  + R   +LR+   
Sbjct  164  DIEAGDRIALMLPTGLDFFVAFFAVLYAGAVPVPIYPPMRLSQIEDHLRRQIGILRNAGV  223

Query  111  RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDD  170
            ++LI  P              + +R    A +G     R       +             
Sbjct  224  KMLITAP--------------EAARLAGFARSGAPTLERIVVVADLEATGELAATPAGAA  269

Query  171  DAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLF  230
             A +QYTSGST  P+GVV+++ NLL+N+RAM         DV  SWLPL+HDMGL+G+ F
Sbjct  270  TAMLQYTSGSTGDPKGVVLSHANLLANIRAMGAALAASSADVFVSWLPLYHDMGLIGAWF  329

Query  231  AALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGI  290
              L+        +P  FL  P  +L  + +   T +  PNFA E  ++      +++EG+
Sbjct  330  GCLYFGAPLYVMSPLTFLARPSAWLSAIHAHRGTLSAAPNFAFELCLDKID--ASELEGL  387

Query  291  DLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATV------------  338
            DL  +R +   +EPV A  +RRF   F   G  P A+ S YGLAE  V            
Sbjct  388  DLSSLRFVANGAEPVGARTIRRFTQRFGPHGFRPEAMASVYGLAENAVGLAFPPLARAPL  447

Query  339  -------AVSMSAPNTGFRTETHAAAEVVTGGRVLPGYEVRIDAAPG-----ARAGTIKL  386
                   A+++             A E+V  G+ LPG+E+RI  A G      R G ++ 
Sbjct  448  IDRVDRDALTLRGEAAPAAPGDAGALEIVACGQPLPGHEIRIVDAAGRELGERREGRLEF  507

Query  387  RGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDI  446
            RG S  A  +    K   L  +G+ D+ D  ++   ++ + GR  ++ I  G + +P +I
Sbjct  508  RGPSATAGYFRNEAKTRELIRDGWLDSGDRAYMAGGDVFVTGRVKDILIRAGRHLYPQEI  567

Query  447  EFIIRGESEQHRTKVACFGV------NERVVVVLESPLDSIIDKAEADRLRCQVVAAT-G  499
            E  I       +  VA FGV       ER+VVV E+       +A  +    + ++A  G
Sbjct  568  EAAIGDIDGIRKGCVAVFGVPDPRSGTERIVVVAETYATETGARAALEAKAQEAMSAIGG  627

Query  500  LQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLATHAW  543
               DE++ V     P T+SGK++R A    Y  G L       W
Sbjct  628  TPADEIVLVPPRTTPKTSSGKIRRSAARDLYLRGRLGAAPRAVW  671


>gi|86740633|ref|YP_481033.1| AMP-dependent synthetase and ligase [Frankia sp. CcI3]
 gi|86567495|gb|ABD11304.1| AMP-dependent synthetase and ligase [Frankia sp. CcI3]
Length=648

 Score =  201 bits (512),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 180/569 (32%), Positives = 250/569 (44%), Gaps = 74/569 (13%)

Query  31   EVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIP-P  89
            EVIS +DL A +      L    ++ GE V + A  + EFL     +   GA   P+P P
Sbjct  90   EVISLRDLAATSRIIAAALTTDGVQAGERVGVLAANSAEFLLALFAISRAGAAACPLPLP  149

Query  90   REA--LKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQF  147
              A  L      ++R       HRV+          R +A       R   L        
Sbjct  150  TTAHDLNGYADRVSRTTAAAGIHRVVTGG-------RVSAILRRTADRLGGLRFLPAADL  202

Query  148  GRATAQQLADTATADWPLCTL--------DDDAYVQYTSGSTAAPRGVVITYRNLLSNMR  199
             R              P C +        DD A VQ+TSGSTAAP+GVV+++R +L  +R
Sbjct  203  VRDVGPATPTRQPHPGPECPVGAVGAVGADDVAIVQFTSGSTAAPKGVVLSHRAVLCGIR  262

Query  200  AMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLT  259
            A+  G +   GD  G WLPL HDMGL  +L +A+   +     +P  F+ DP G+LR   
Sbjct  263  AIIDGIRLGEGDHGGIWLPLFHDMGLFATL-SAIMTGIPMTVWSPADFVRDPAGWLRSFL  321

Query  260  SSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAG  319
            +SGAT +  PNFA + L+ A      ++ G+D+ + R  +  +EPV A G+ RF   FA 
Sbjct  322  ASGATISPAPNFAYDDLVRAIDPD--EVPGLDMRRWRVALNGAEPVSAVGVERFLDHFAP  379

Query  320  VGLAPTALGSGYGLAEATVAVSMS----APNTGFRTETHAAAE---------------VV  360
             G APTA+   YG+AEAT+AV+      AP   +      AAE               +V
Sbjct  380  AGFAPTAMFPVYGMAEATLAVAFPPLGRAPVVTWVDRDRLAAEGIVTEVPREHPRAKGLV  439

Query  361  TGGRVLPGYEVRI--------------DAAPGARAGTIKLRGDSVAAKAYV-GGKKLDAL  405
              GR +    +RI                AP  R G I++RG SV +     GG      
Sbjct  440  AVGRPVRDIRIRIADLHGDVLADPLGDGLAPSLRVGEIQIRGGSVTSGYLTAGGLTTGGF  499

Query  406  DEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFG  465
              +G+  T DLGF   D++ + GR  E+ I+ G N +P D E  +R     HR +V  FG
Sbjct  500  TADGWLRTGDLGFQRGDDLFVTGRDKEMIIIRGVNYYPEDAEAAVRDLPGVHRRRVVAFG  559

Query  466  VNER------------------VVVVLESPLDSIIDKAE-ADRLRCQVVAATGLQLDELI  506
              ++                  V VV E+ L    D+A  A  LR    AA GL    + 
Sbjct  560  SPDQPDAAGSPPDATGAKAAGGVTVVGETALTEPADRARLATDLRMAATAALGLSTVTVR  619

Query  507  TVRRGAIPTTTSGKLKRRAVAQAYRDGTL  535
             V  GA+P T+SGK +R AV      G L
Sbjct  620  LVEPGALPRTSSGKFQRLAVRDLVGRGVL  648


>gi|112791733|gb|ABI22131.1| putative non-ribosomal peptide synthetase [Streptomyces lavendulae]
Length=1836

 Score =  201 bits (511),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 172/545 (32%), Positives = 250/545 (46%), Gaps = 72/545 (13%)

Query  59   PVLITAHTNLEFLSCFLGLMLHGAVPVPI-PPREALKTTERFMTRLGPLLRH--HRVLIC  115
            PVL+      ++L  FL  +  G    P+ PP  A     R   RLG +L       L+ 
Sbjct  143  PVLLLMQPGPDYLKGFLATVYAGLPAAPVYPPNPA--DVRRDFIRLGAILAKLPDATLLT  200

Query  116  TPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADT-----ATADW--PLCTL  168
             P   + +R                E   E+      ++L DT     A  DW  P    
Sbjct  201  EPGLLEPLR----------------ELFAERLPDVRPERLVDTSVPAGAEDDWRAPAVRP  244

Query  169  DDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGS  228
            ++  ++Q+TSGST  PRGV++++RNLL+N+RA+              WLP +HDMGLVG 
Sbjct  245  EEPLFIQFTSGSTGTPRGVLVSHRNLLANVRAITDRFGLDTSSTGALWLPPYHDMGLVGG  304

Query  229  LFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIE  288
            +   L +       +P  F+ DP+G+LRL++ +GATHT  PNF   + +     R  D+ 
Sbjct  305  VLTPLVSGFPIHLLSPLSFVSDPMGWLRLVSETGATHTGAPNFG--YALATRRARDEDVA  362

Query  289  GIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTG  348
             +DL +++     +EPV A  +R FA  FA  GL+P      YGLAE+T+ VS   P  G
Sbjct  363  ALDLSRLQVAFSGAEPVDASTLRAFAERFAPAGLSPDVFLPCYGLAESTLIVSGGRPGAG  422

Query  349  FRTET-----------------HAAAEVVTGGRVLPGYEVRI-DAAPGARAGTIKLRGDS  390
             RT                     A E+V+ G V+ G EVRI D   GA AG  ++    
Sbjct  423  LRTHRLDPEALALGRAEPARPGAPATELVSSGPVVAGTEVRIADPVTGAAAGPGEIGEVF  482

Query  391  VAAKAYVGGKKLD------------ALDEEGFCDTHDLGFL-VDDEIVILGRQDEVFIVH  437
            VA+ +   G   D            A     +  T DLGFL  D ++V + R  +V +V 
Sbjct  483  VASDSVAEGYFEDPEETARTFGATLAGSSRSWMRTGDLGFLGADGDLVPVARIKDVIVVR  542

Query  438  GENRFPYDIEFIIRGESEQHRTK-VACFGV-----NERVVVVLESPLDSIIDKAEADRLR  491
            G N  P DIE  ++      R   VA  GV      E ++VV E   ++  D+A+A R+ 
Sbjct  543  GRNLHPQDIERTVQDTDPGIRKGCVAAAGVPGPDGGEEILVVAELRPEAADDEAQARRIA  602

Query  492  CQVVAATGLQLDELI----TVRRGAIPTTTSGKLKRRAVAQAYRDGTLPR-LATHAWTAD  546
             +V AA   +    +     +R   +P T+SGK++R A   A+ DG+L   L   A TA 
Sbjct  603  REVRAAVAREHSAPVRGIHLIRPSTLPKTSSGKVQRSAARAAHLDGSLATVLCDTADTAA  662

Query  547  PDSAP  551
            P  AP
Sbjct  663  PTGAP  667


 Score = 42.0 bits (97),  Expect = 0.29, Method: Compositional matrix adjust.
 Identities = 19/36 (53%), Positives = 26/36 (73%), Gaps = 0/36 (0%)

Query  164   PLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMR  199
             PL T DD AY+ +TSGST  P+GVVI +R  ++ +R
Sbjct  1365  PLTTPDDPAYLLFTSGSTGRPKGVVIPHRGPVNLIR  1400


>gi|54301694|ref|YP_131687.1| acyltransferase family protein [Photobacterium profundum SS9]
 gi|46915114|emb|CAG21887.1| hypothetical acyltransferase family protein [Photobacterium profundum 
SS9]
Length=945

 Score =  200 bits (509),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 161/551 (30%), Positives = 247/551 (45%), Gaps = 60/551 (10%)

Query  33   ISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREA  92
            ISY+ L   A      L + D++ G+ + I   T+ ++   F G++   A+PVPI P   
Sbjct  154  ISYRALRDEALRIASGLVKQDVEPGQCIAIMLPTSNDYFYSFFGILFARAIPVPIYPPAR  213

Query  93   LKTTERFMTRLGPLLRHH--RVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRA  150
                E  + R   +L++   R+LI  P        +     Q+    A+           
Sbjct  214  PSQIEDHLKRHARILQNSQVRILITVPEAKP---LSQLLRLQVPSIQAVV----------  260

Query  151  TAQQLADTATADWPLCTLD----DDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQ  206
            T  +L   A+   PL T D    D A++QYTSGST  P+GV +T+ NLL+N+R M     
Sbjct  261  TVPELRQAASG--PLSTGDAQSSDIAFLQYTSGSTGNPKGVALTHANLLANVRTMGRVVC  318

Query  207  FQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHT  266
                DV  SWLP++HDMGL+G+ F +L++++  V  +P  FL  P  +L  +     T +
Sbjct  319  VDSTDVFVSWLPVYHDMGLIGTWFGSLYHAIPLVIMSPLLFLSKPQRWLWAIHHHRGTLS  378

Query  267  FMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTA  326
              PNFA E  IN      A++EG+DL   R     +EPV    +RRF   FA  G  P  
Sbjct  379  PAPNFAYELCINKID--DAELEGLDLSTWRLSWNGAEPVSPSTIRRFTERFAKYGFRPET  436

Query  327  LGSGYGLAEATVAVSMSA-------------PNTGFRTETHAAA------EVVTGGRVLP  367
            +   YGLAE +V ++                P   F     AAA      ++V  G+ LP
Sbjct  437  MSPVYGLAECSVGLTFPTSVRLPLIERIRREPMERFGRAITAAADETDVMQIVGLGQPLP  496

Query  368  GYEVRI-----DAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDD  422
            G+++RI        P    G ++ +G S     Y   +K   L    + DT D  F+V  
Sbjct  497  GHQIRIVDEFGRELPEREEGGLEFKGPSATQGYYRDPEKTQQLFHGEWLDTGDRAFMVGG  556

Query  423  EIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTKVACFGVN------ERVVVVLES  476
            E+ I GR  ++ I  G N  P+++E  +       +  VA F  +      ER++V+ E+
Sbjct  557  ELFITGRSKDIIIRAGRNIHPHELEEAVCNIPGIRKGCVAAFASHDSHSGTERLIVLAET  616

Query  477  PLDSIIDKAEADRLRCQV----VAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRD  532
                  DK +  RL+ +V    +   G   DE++      +P T+SGK++R A    Y  
Sbjct  617  ---RETDKVQQQRLQQEVNNLSLDLLGSPPDEVVIAPPHTVPKTSSGKIRRAACKDLYEQ  673

Query  533  GTLPRLATHAW  543
              L       W
Sbjct  674  NKLDARQRTVW  684


>gi|320353995|ref|YP_004195334.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus 
DSM 2032]
 gi|320122497|gb|ADW18043.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus 
DSM 2032]
Length=964

 Score =  200 bits (509),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 167/562 (30%), Positives = 262/562 (47%), Gaps = 73/562 (12%)

Query  28   EDSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPI  87
            E+   +S++ L+ +A A    L  LD++ G  V +   T L++   F G++L GAVPVP+
Sbjct  169  EEPVTVSHRTLLDQATAIAAGLEALDVQPGASVALMLPTGLDYFFSFFGVLLAGAVPVPL  228

Query  88   -PPREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGD-E  145
             PP    +  +         LR HR ++               +CQ      +AEA    
Sbjct  229  YPPLRPSQFEDH--------LRRHRHIL--------------NNCQALLLITVAEARPLA  266

Query  146  QFGRA---------TAQQLADTATADWPL-CTLDDDAYVQYTSGSTAAPRGVVITYRNLL  195
            +F +A         T ++L    TA  P+  + +D A++QYTSGST  P+GV++++ NLL
Sbjct  267  RFLKAQVDSLRRIVTVEELQKAGTAFTPVSASPEDTAFLQYTSGSTGIPKGVILSHANLL  326

Query  196  SNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFL  255
            +N+RAM         D+  SWLPL+HDMGL+G+   +L++    V  +P  FL  P  +L
Sbjct  327  TNIRAMGRAIDANPRDIFVSWLPLYHDMGLIGAWLGSLYHGCQLVAMSPLAFLVHPERWL  386

Query  256  RLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAA  315
              +     T +  PNF  E  +N        ++G+DL   R     +EPV AE + RF  
Sbjct  387  WAIHRHRGTLSAAPNFGYELCLNKIE--PPQLDGLDLSSWRLAFNGAEPVSAETIARFTD  444

Query  316  TFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETH--------------AAAE---  358
             FA  G  P A+   YGLAE+TV ++   P  G R                  +A E   
Sbjct  445  RFAPHGFRPEAMAPVYGLAESTVGLAF--PPLGRRPLIDRVQRQPLLERGLALSAGEDDP  502

Query  359  ----VVTGGRVLPGYEVRIDAA-----PGARAGTIKLRGDSVAAKAYVGGKKLDALDEEG  409
                +V  GRVL G+++R+  A     P  + G ++  G S  +  Y   ++   L    
Sbjct  503  HPLRIVACGRVLSGHQLRVVDANDHELPERQVGRLQFYGPSATSGYYRSPQQTKTLFHGQ  562

Query  410  FCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHRTK-VACFGV--  466
            + DT DLG+L   ++ +  R  ++ I  G N  PY++E  I GE E  R   VA FG   
Sbjct  563  WLDTGDLGYLAGQDLYLTSRVKDLIIRGGRNISPYELEEAI-GEIEGVRKGCVAVFGNAD  621

Query  467  ----NERVVVVLES-PLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKL  521
                 E++VV+ ES   D  +     +R+  + V   G+  DE++      +  T+SGK+
Sbjct  622  PTSGTEKLVVLAESRSRDPGMLANLRERIINRSVDILGMPPDEVVLAPPHTVLKTSSGKI  681

Query  522  KRRAVAQAYRDGTLPRLATHAW  543
            +R A  + Y  G + +     W
Sbjct  682  RREASRELYAQGRIGQPPRAVW  703



Lambda     K      H
   0.322    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1255828141926




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40