BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0036c Length=257 Score E Sequences producing significant alignments: (Bits) Value gi|15607178|ref|NP_214550.1| hypothetical protein Rv0036c [Mycob... 506 9e-142 gi|289445562|ref|ZP_06435306.1| conserved hypothetical protein [... 505 2e-141 gi|289441404|ref|ZP_06431148.1| conserved hypothetical protein [... 505 3e-141 gi|294995650|ref|ZP_06801341.1| hypothetical protein Mtub2_14378... 503 8e-141 gi|298527434|ref|ZP_07014843.1| conserved hypothetical protein [... 451 5e-125 gi|240168762|ref|ZP_04747421.1| hypothetical protein MkanA1_0558... 426 1e-117 gi|183980086|ref|YP_001848377.1| hypothetical protein MMAR_0051 ... 419 2e-115 gi|118466337|ref|YP_879350.1| hypothetical protein MAV_0050 [Myc... 417 7e-115 gi|41406141|ref|NP_958977.1| hypothetical protein MAP0043c [Myco... 416 1e-114 gi|296167093|ref|ZP_06849503.1| wyosine base formation domain pr... 416 2e-114 gi|118615964|ref|YP_904296.1| hypothetical protein MUL_0050 [Myc... 416 2e-114 gi|342860241|ref|ZP_08716893.1| hypothetical protein MCOL_15230 ... 398 5e-109 gi|224988419|ref|YP_002643086.1| hypothetical protein JTY_0037 [... 397 1e-108 gi|336459442|gb|EGO38384.1| TIGR03084 family protein [Mycobacter... 396 2e-108 gi|121635946|ref|YP_976169.1| hypothetical protein BCG_0067c [My... 393 1e-107 gi|254819077|ref|ZP_05224078.1| hypothetical protein MintA_04078... 380 8e-104 gi|254773095|ref|ZP_05214611.1| hypothetical protein MaviaA2_002... 380 1e-103 gi|120406988|ref|YP_956817.1| hypothetical protein Mvan_6059 [My... 369 3e-100 gi|108802353|ref|YP_642550.1| hypothetical protein Mmcs_5394 [My... 362 3e-98 gi|333992968|ref|YP_004525582.1| hypothetical protein JDM601_432... 358 3e-97 gi|118469385|ref|YP_891118.1| hypothetical protein MSMEG_6923 [M... 356 2e-96 gi|315446806|ref|YP_004079685.1| hypothetical protein Mspyr1_532... 355 3e-96 gi|145221442|ref|YP_001132120.1| wyosine base formation [Mycobac... 354 9e-96 gi|226361031|ref|YP_002778809.1| hypothetical protein ROP_16170 ... 332 5e-89 gi|111018931|ref|YP_701903.1| hypothetical protein RHA1_ro01934 ... 331 6e-89 gi|169632003|ref|YP_001705652.1| hypothetical protein MAB_4930 [... 331 8e-89 gi|229490586|ref|ZP_04384424.1| conserved hypothetical protein [... 315 3e-84 gi|226305240|ref|YP_002765198.1| hypothetical protein RER_17510 ... 312 3e-83 gi|297193722|ref|ZP_06911120.1| conserved hypothetical protein [... 308 4e-82 gi|333918113|ref|YP_004491694.1| hypothetical protein AS9A_0437 ... 307 1e-81 gi|302560056|ref|ZP_07312398.1| conserved hypothetical protein [... 305 5e-81 gi|326384233|ref|ZP_08205915.1| wyosine base formation [Gordonia... 303 2e-80 gi|291438955|ref|ZP_06578345.1| conserved hypothetical protein [... 302 3e-80 gi|312140991|ref|YP_004008327.1| wyosine base formation protein ... 301 6e-80 gi|325675372|ref|ZP_08155056.1| wyosine base formation superfami... 300 2e-79 gi|297200470|ref|ZP_06917867.1| conserved hypothetical protein [... 298 4e-79 gi|329941356|ref|ZP_08290635.1| hypothetical protein SGM_6127 [S... 296 1e-78 gi|262203695|ref|YP_003274903.1| wyosine base formation [Gordoni... 296 2e-78 gi|317505928|ref|ZP_07963761.1| hypothetical protein HMPREF9336_... 296 3e-78 gi|343927836|ref|ZP_08767304.1| hypothetical protein GOALK_097_0... 294 9e-78 gi|54027594|ref|YP_121836.1| hypothetical protein nfa56200 [Noca... 291 8e-77 gi|296394807|ref|YP_003659691.1| wyosine base formation domain-c... 288 7e-76 gi|302552253|ref|ZP_07304595.1| wyosine base formation domain-co... 287 8e-76 gi|289770055|ref|ZP_06529433.1| conserved hypothetical protein [... 286 2e-75 gi|297158285|gb|ADI07997.1| hypothetical protein SBI_04877 [Stre... 286 3e-75 gi|290959527|ref|YP_003490709.1| hypothetical protein SCAB_51241... 285 7e-75 gi|21222768|ref|NP_628547.1| hypothetical protein SCO4378 [Strep... 284 1e-74 gi|284028114|ref|YP_003378045.1| Wyosine base formation domain-c... 283 2e-74 gi|345001347|ref|YP_004804201.1| Wyosine base formation domain-c... 281 6e-74 gi|294629946|ref|ZP_06708506.1| conserved hypothetical protein [... 281 9e-74 >gi|15607178|ref|NP_214550.1| hypothetical protein Rv0036c [Mycobacterium tuberculosis H37Rv] gi|15839413|ref|NP_334450.1| hypothetical protein MT0041 [Mycobacterium tuberculosis CDC1551] gi|31791213|ref|NP_853706.1| hypothetical protein Mb0037c [Mycobacterium bovis AF2122/97] 66 more sequence titles Length=257 Score = 506 bits (1304), Expect = 9e-142, Method: Compositional matrix adjust. Identities = 257/257 (100%), Positives = 257/257 (100%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA Sbjct 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ Sbjct 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWLTIAQAFAGPPGRGR Sbjct 241 RWLTIAQAFAGPPGRGR 257 >gi|289445562|ref|ZP_06435306.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289418520|gb|EFD15721.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=257 Score = 505 bits (1301), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 256/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADPGPFVADLRAE+DDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 1 MADPGPFVADLRAETDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA Sbjct 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ Sbjct 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWLTIAQAFAGPPGRGR Sbjct 241 RWLTIAQAFAGPPGRGR 257 >gi|289441404|ref|ZP_06431148.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289748501|ref|ZP_06507879.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289414323|gb|EFD11563.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289689088|gb|EFD56517.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=257 Score = 505 bits (1300), Expect = 3e-141, Method: Compositional matrix adjust. Identities = 256/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAEL+TAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA Sbjct 61 DEAGFAELITAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ Sbjct 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWLTIAQAFAGPPGRGR Sbjct 241 RWLTIAQAFAGPPGRGR 257 >gi|294995650|ref|ZP_06801341.1| hypothetical protein Mtub2_14378 [Mycobacterium tuberculosis 210] Length=257 Score = 503 bits (1296), Expect = 8e-141, Method: Compositional matrix adjust. Identities = 256/257 (99%), Positives = 256/257 (99%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA Sbjct 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPFLVELR PSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ Sbjct 181 TPPAEPFLVELRRPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWLTIAQAFAGPPGRGR Sbjct 241 RWLTIAQAFAGPPGRGR 257 >gi|298527434|ref|ZP_07014843.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497228|gb|EFI32522.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=235 Score = 451 bits (1160), Expect = 5e-125, Method: Compositional matrix adjust. Identities = 228/230 (99%), Positives = 229/230 (99%), Gaps = 0/230 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 2 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 61 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA Sbjct 62 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 121 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL Sbjct 122 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 181 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTL 230 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRAL+ L Sbjct 182 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALTLL 231 >gi|240168762|ref|ZP_04747421.1| hypothetical protein MkanA1_05585 [Mycobacterium kansasii ATCC 12478] Length=253 Score = 426 bits (1096), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 217/252 (87%), Positives = 228/252 (91%), Gaps = 0/252 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA PGP VADLRAESDDLDALVA LP RWA+PTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 2 MAGPGPIVADLRAESDDLDALVAPLPPQRWAEPTPAPGWTIAHQIGHLLWTDRVALTAVT 61 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFA+++T AAA+PAGFVD A ELAA P ELL DWR+TRGRLH+ LL V DGRKL Sbjct 62 DEAGFADVLTQAAADPAGFVDAGAEELAARPPGELLDDWRMTRGRLHDALLTVADGRKLP 121 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALG+ RPAT RLRSIAHLGVRTRDYAF VNNL Sbjct 122 WFGPPMSAASMATARLMETWAHGLDVADALGISRPATNRLRSIAHLGVRTRDYAFFVNNL 181 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPF VELRGP GDTWSWGP+DAAQRVTGSAEDFCFLVTQRRAL+TLD+ A GEDAQ Sbjct 182 TPPAEPFRVELRGPDGDTWSWGPADAAQRVTGSAEDFCFLVTQRRALATLDIAAEGEDAQ 241 Query 241 RWLTIAQAFAGP 252 RWLTIAQAFAGP Sbjct 242 RWLTIAQAFAGP 253 >gi|183980086|ref|YP_001848377.1| hypothetical protein MMAR_0051 [Mycobacterium marinum M] gi|183173412|gb|ACC38522.1| conserved hypothetical protein [Mycobacterium marinum M] Length=257 Score = 419 bits (1078), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 211/257 (83%), Positives = 227/257 (89%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA PGP VADL AESDDLDALVA LP RW++ TPAPGW+IAHQI HLLWTDRVALTAVT Sbjct 1 MAGPGPIVADLEAESDDLDALVAPLPPQRWSELTPAPGWSIAHQIAHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFA+++TAAAANPAGFVD+ A ELAA+ PAELL+DWR+TRGRLHE LL V DGRKL Sbjct 61 DEAGFADVLTAAAANPAGFVDEGAEELAALPPAELLSDWRLTRGRLHEALLNVADGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV RPAT RLRSIAHLGVRTRDYA+ VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRPATDRLRSIAHLGVRTRDYAYFVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PP E FLVELRGP GD WSWGP+DAAQRVTG AEDFCFLVTQRR LS+L + A GEDA+ Sbjct 181 APPTEQFLVELRGPGGDIWSWGPADAAQRVTGPAEDFCFLVTQRRPLSSLHLTATGEDAR 240 Query 241 RWLTIAQAFAGPPGRGR 257 +WL IAQAFAGPPG GR Sbjct 241 QWLQIAQAFAGPPGEGR 257 >gi|118466337|ref|YP_879350.1| hypothetical protein MAV_0050 [Mycobacterium avium 104] gi|118167624|gb|ABK68521.1| conserved hypothetical protein [Mycobacterium avium 104] Length=257 Score = 417 bits (1073), Expect = 7e-115, Method: Compositional matrix adjust. Identities = 215/257 (84%), Positives = 221/257 (86%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M P P VADLRAESD LDALVA LP RWADPTPA GWTIAHQIGHLLWTDRVAL AVT Sbjct 1 MTGPAPIVADLRAESDALDALVAPLPPGRWADPTPAAGWTIAHQIGHLLWTDRVALIAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE GFAE++ AAA+PAGFVD A ELAAV+PAELL DWR TR RLH LL VP GRKL Sbjct 61 DEPGFAEVLAGAAADPAGFVDKGAEELAAVAPAELLADWRATRDRLHRALLGVPAGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV RPAT RLRSIAHLGVRTRDYAF VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRPATDRLRSIAHLGVRTRDYAFAVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPFLVELRGP GDTWSWGP +AAQRVTGSAEDFCFLVTQRR LS LD+ A G DAQ Sbjct 181 TPPAEPFLVELRGPRGDTWSWGPPEAAQRVTGSAEDFCFLVTQRRPLSALDITADGADAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLEIAQAFAGPPGPGR 257 >gi|41406141|ref|NP_958977.1| hypothetical protein MAP0043c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394489|gb|AAS02360.1| hypothetical protein MAP_0043c [Mycobacterium avium subsp. paratuberculosis K-10] Length=257 Score = 416 bits (1070), Expect = 1e-114, Method: Compositional matrix adjust. Identities = 214/257 (84%), Positives = 220/257 (86%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M P P VADLRAESD LDALVA LP RWADPTPA GWTIAHQIGHLLWTDRVAL AVT Sbjct 1 MTGPAPIVADLRAESDALDALVAPLPPGRWADPTPAAGWTIAHQIGHLLWTDRVALIAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE GFAE++ AAA+PAGFVD A ELAAV+PAELL DWR TR RLH LL VP GRKL Sbjct 61 DEPGFAEVLAGAAADPAGFVDKGAEELAAVAPAELLADWRATRDRLHRALLGVPAGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV RPAT RLRSIAHLGVRTRDYAF VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRPATDRLRSIAHLGVRTRDYAFAVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPFLVEL GP GDTWSWGP +AAQRVTGSAEDFCFLVTQRR LS LD+ A G DAQ Sbjct 181 TPPAEPFLVELCGPGGDTWSWGPPEAAQRVTGSAEDFCFLVTQRRPLSALDITAFGADAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLEIAQAFAGPPGPGR 257 >gi|296167093|ref|ZP_06849503.1| wyosine base formation domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897535|gb|EFG77131.1| wyosine base formation domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=258 Score = 416 bits (1069), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 211/257 (83%), Positives = 226/257 (88%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA P VADLRAESDDLDALVA LPA+RWADPTPAPGWTIAHQ+GHLLWTDRVALT+VT Sbjct 2 MAGPEAIVADLRAESDDLDALVAPLPAERWADPTPAPGWTIAHQVGHLLWTDRVALTSVT 61 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAE++ +AAA+P GFVD A E+AA++P ELL +WR+TRGRLH+ELL V GRKL Sbjct 62 DEAGFAEVLKSAAADPTGFVDAGAEEVAALAPGELLAEWRITRGRLHDELLKVASGRKLP 121 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV R AT RLRSIAHLGVRTRDYAF V+NL Sbjct 122 WFGPPMSAASMATARLMETWAHGLDVADALGVKRAATDRLRSIAHLGVRTRDYAFSVHNL 181 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PAEPFLVELRGP GD WSWGPSDAAQRVTGSAEDFCFLVTQRR L+ LDV A G DAQ Sbjct 182 PAPAEPFLVELRGPGGDAWSWGPSDAAQRVTGSAEDFCFLVTQRRPLAALDVTADGPDAQ 241 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 242 RWLEIAQAFAGPPGAGR 258 >gi|118615964|ref|YP_904296.1| hypothetical protein MUL_0050 [Mycobacterium ulcerans Agy99] gi|118568074|gb|ABL02825.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=257 Score = 416 bits (1068), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 210/257 (82%), Positives = 226/257 (88%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA PGP VADL AE+DDLDALVA L RW++ TPAPGWTIAHQI HLLWTDRVALTAVT Sbjct 1 MAGPGPIVADLEAENDDLDALVAPLAPQRWSELTPAPGWTIAHQIAHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFA+++TAAAANPAGFVD+ A ELAA+ PAELL+DWR+TRGRLHE LL V DGRKL Sbjct 61 DEAGFADVLTAAAANPAGFVDEGAEELAAMPPAELLSDWRLTRGRLHEALLNVADGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV RPAT RLRSIAHLGVRTRDYA+ VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRPATDRLRSIAHLGVRTRDYAYFVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PP E FLVELRGP GD WSWGP+DAAQRVTG AEDFCFLVTQRR LS+L + A GEDA+ Sbjct 181 APPTEQFLVELRGPGGDLWSWGPADAAQRVTGPAEDFCFLVTQRRPLSSLHLTATGEDAR 240 Query 241 RWLTIAQAFAGPPGRGR 257 +WL IAQAFAGPPG GR Sbjct 241 QWLQIAQAFAGPPGEGR 257 >gi|342860241|ref|ZP_08716893.1| hypothetical protein MCOL_15230 [Mycobacterium colombiense CECT 3035] gi|342132619|gb|EGT85848.1| hypothetical protein MCOL_15230 [Mycobacterium colombiense CECT 3035] Length=257 Score = 398 bits (1022), Expect = 5e-109, Method: Compositional matrix adjust. Identities = 212/257 (83%), Positives = 224/257 (88%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M P P V DLRAESD LD LVA LP DRWADPTPAPGWTIAHQIGHLLWTDRVAL AVT Sbjct 1 MTGPAPIVDDLRAESDALDELVAPLPPDRWADPTPAPGWTIAHQIGHLLWTDRVALIAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAE++ AAA+PAGFVD+ A ELAA++PAELL WRVTRGRLH+ LL V GRKL Sbjct 61 DEAGFAEVLAGAAADPAGFVDEGAGELAALAPAELLAQWRVTRGRLHDALLTVQQGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV RPAT+RLRSIAHLGVRTRD+AF VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRPATERLRSIAHLGVRTRDFAFAVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PPAEPFLVELRGP+GDTWSWGP DA QRVTGSA+DFCFLVTQRR LS LD+ A G DAQ Sbjct 181 APPAEPFLVELRGPAGDTWSWGPPDAQQRVTGSAQDFCFLVTQRRPLSALDLTAQGADAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLQIAQAFAGPPGPGR 257 >gi|224988419|ref|YP_002643086.1| hypothetical protein JTY_0037 [Mycobacterium bovis BCG str. Tokyo 172] gi|224771532|dbj|BAH24338.1| hypothetical protein JTY_0037 [Mycobacterium bovis BCG str. Tokyo 172] gi|341599962|emb|CCC62630.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=226 Score = 397 bits (1019), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA Sbjct 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWG 202 TPPAEPFLVELRGPSGDTWSWG Sbjct 181 TPPAEPFLVELRGPSGDTWSWG 202 >gi|336459442|gb|EGO38384.1| TIGR03084 family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=246 Score = 396 bits (1017), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 204/246 (83%), Positives = 210/246 (86%), Gaps = 0/246 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M P P VADLRAESD LDALVA LP RWADPTPA GWTIAHQIGHLLWTDRVAL AVT Sbjct 1 MTGPAPIVADLRAESDALDALVAPLPPGRWADPTPAAGWTIAHQIGHLLWTDRVALIAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE GFAE++ AAA+PAGFVD A ELAAV+PAELL DWR TR RLH LL VP GRKL Sbjct 61 DEPGFAEVLAGAAADPAGFVDKGAEELAAVAPAELLADWRATRDRLHRALLGVPAGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV RPAT RLRSIAHLGVRTRDYAF VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRPATDRLRSIAHLGVRTRDYAFAVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPFLVEL GP GDTWSWGP +AAQRVTGSAEDFCFLVTQRR LS LD+ A G DAQ Sbjct 181 TPPAEPFLVELCGPGGDTWSWGPPEAAQRVTGSAEDFCFLVTQRRPLSALDITAFGADAQ 240 Query 241 RWLTIA 246 RWL IA Sbjct 241 RWLEIA 246 >gi|121635946|ref|YP_976169.1| hypothetical protein BCG_0067c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121491593|emb|CAL70051.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=226 Score = 393 bits (1010), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 201/202 (99%), Positives = 201/202 (99%), Gaps = 0/202 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT Sbjct 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA Sbjct 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWG 202 TPPAE FLVELRGPSGDTWSWG Sbjct 181 TPPAELFLVELRGPSGDTWSWG 202 >gi|254819077|ref|ZP_05224078.1| hypothetical protein MintA_04078 [Mycobacterium intracellulare ATCC 13950] Length=257 Score = 380 bits (977), Expect = 8e-104, Method: Compositional matrix adjust. Identities = 204/257 (80%), Positives = 218/257 (85%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M P P V DLRAES+ LDALVA L +RWADPTPAPGWTIAHQIGHLLWTDRVAL AVT Sbjct 1 MTGPAPMVEDLRAESEALDALVAPLQPERWADPTPAPGWTIAHQIGHLLWTDRVALIAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE GFA+++ AAA+P GFVD A ELAA++PAELL DWR TR RLHEELL V GRKL Sbjct 61 DEPGFADVLAGAAADPTGFVDKGAEELAALAPAELLADWRTTRRRLHEELLGVTAGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV RPAT RLRSIAHLGVRTRD+AF VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRPATDRLRSIAHLGVRTRDFAFAVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PPAEPFLVELRGP GD WSWGP +A QRV+GSAEDFC+LVTQRR LS LD+ A G DA+ Sbjct 181 APPAEPFLVELRGPGGDIWSWGPPEADQRVSGSAEDFCYLVTQRRPLSALDITAQGADAR 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLEIAQAFAGPPGVGR 257 >gi|254773095|ref|ZP_05214611.1| hypothetical protein MaviaA2_00216 [Mycobacterium avium subsp. avium ATCC 25291] Length=239 Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 195/239 (82%), Positives = 203/239 (85%), Gaps = 0/239 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M P P ADLRAESD LDALVA LP R DPTPA GWTIAHQIGHLLWTDRVAL AVT Sbjct 1 MTGPAPIAADLRAESDALDALVAPLPPGRCVDPTPAAGWTIAHQIGHLLWTDRVALIAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE+GF+E++ AAA+PAGFVD A ELAAV+PAELL DWR TR RLH LL VP GRKL Sbjct 61 DESGFSEVLAGAAADPAGFVDKGAEELAAVAPAELLADWRATRDRLHRALLGVPAGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPAT RLRSIAHLGVRTRDYAF VNNL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATDRLRSIAHLGVRTRDYAFAVNNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDA 239 TPPAEPFLVELRGP GDTWSWGP +A QRVTGSAEDFCFLVTQRR LS LD+ A G DA Sbjct 181 TPPAEPFLVELRGPRGDTWSWGPPEAVQRVTGSAEDFCFLVTQRRPLSALDITADGADA 239 >gi|120406988|ref|YP_956817.1| hypothetical protein Mvan_6059 [Mycobacterium vanbaalenii PYR-1] gi|119959806|gb|ABM16811.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=258 Score = 369 bits (946), Expect = 3e-100, Method: Compositional matrix adjust. Identities = 189/257 (74%), Positives = 205/257 (80%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MAD + +LRAESDDLDALVA LPA RW PTPAPGWTIAHQIGHL+WTDRVAL +VT Sbjct 1 MADAARVIDELRAESDDLDALVAALPAARWTLPTPAPGWTIAHQIGHLMWTDRVALLSVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGFA ++ A+ NP GFVD AA ELA SP ELL DWR TR LH+ L V DGRKL Sbjct 61 DEAGFAAVLAQASENPGGFVDAAAEELALTSPGELLADWRATRAALHDALSTVADGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV R T RLRSIAH+GVRTRD+AF V+ L Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVTRAPTARLRSIAHIGVRTRDFAFTVHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPP EPF V+L P G W+WGP DAAQRVTGSAE FC L TQRR + LDV AVG DA+ Sbjct 181 TPPPEPFHVKLSAPHGAQWTWGPEDAAQRVTGSAEHFCMLATQRRPRAALDVVAVGPDAE 240 Query 241 RWLTIAQAFAGPPGRGR 257 +WLTIAQAFAGPPG GR Sbjct 241 KWLTIAQAFAGPPGPGR 257 >gi|108802353|ref|YP_642550.1| hypothetical protein Mmcs_5394 [Mycobacterium sp. MCS] gi|119871506|ref|YP_941458.1| wyosine base formation [Mycobacterium sp. KMS] gi|126438333|ref|YP_001074024.1| wyosine base formation [Mycobacterium sp. JLS] gi|108772772|gb|ABG11494.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697595|gb|ABL94668.1| Wyosine base formation [Mycobacterium sp. KMS] gi|126238133|gb|ABO01534.1| Wyosine base formation [Mycobacterium sp. JLS] Length=258 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 189/257 (74%), Positives = 207/257 (81%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA VADLRAESD+LDAL+A LPA W+ PTPAPGWTIAHQI HLLWTDRVAL +VT Sbjct 1 MAAADSVVADLRAESDELDALIADLPAAMWSTPTPAPGWTIAHQIAHLLWTDRVALLSVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGF ++ AA +P GFVD AA +LAA PAELL DWR TRG LH+ LL V DGRKL Sbjct 61 DEAGFNVVLGDAAKDPGGFVDRAAEDLAATPPAELLADWRTTRGLLHDALLTVADGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV R T RLRSIAH+GVRTRD+AF V+ L Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVRRTPTTRLRSIAHIGVRTRDFAFAVHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PAE F VEL P G W+WGP+DAAQRVTGSAE FCFLVTQRR + LDV AVG DA+ Sbjct 181 PAPAETFHVELTAPDGSPWTWGPADAAQRVTGSAEHFCFLVTQRRPRTELDVTAVGPDAE 240 Query 241 RWLTIAQAFAGPPGRGR 257 +WL+IAQAFAGPPG GR Sbjct 241 QWLSIAQAFAGPPGPGR 257 >gi|333992968|ref|YP_004525582.1| hypothetical protein JDM601_4328 [Mycobacterium sp. JDM601] gi|333488936|gb|AEF38328.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=257 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 189/257 (74%), Positives = 206/257 (81%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA+ P VADL AES+DLD LVA L +W PTPA GW+IAHQI HLLWTDRVAL A+T Sbjct 1 MAETEPIVADLSAESEDLDTLVAPLTDSQWGAPTPAAGWSIAHQIAHLLWTDRVALLAIT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEAGF++ + AA +P GFVD A ELA +PA+LL DWR TR +LH+ LL VPDGRKL Sbjct 61 DEAGFSDQLAAAMGDPTGFVDAGAAELATAAPADLLADWRSTRAQLHQALLGVPDGRKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVADALGV R T RLRSIAHLGVRTRDYAF V+NL Sbjct 121 WFGPPMSAASMATARLMETWAHGLDVADALGVRRAPTARLRSIAHLGVRTRDYAFTVHNL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPP EPF VEL P G W+WGP +A QRVTGSAE FCFLVTQRR L+ LDV A GEDAQ Sbjct 181 TPPGEPFHVELHAPGGGVWTWGPVNAEQRVTGSAEHFCFLVTQRRPLADLDVAAHGEDAQ 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLEIAQAFAGPPGSGR 257 >gi|118469385|ref|YP_891118.1| hypothetical protein MSMEG_6923 [Mycobacterium smegmatis str. MC2 155] gi|118170672|gb|ABK71568.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=257 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 190/252 (76%), Positives = 207/252 (83%), Gaps = 0/252 (0%) Query 6 PFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGF 65 P VADLRAESD LDALVA LP WA TPA GWTIAHQIGHLLWTD++AL AVTDEAGF Sbjct 5 PIVADLRAESDALDALVADLPEAAWATDTPAQGWTIAHQIGHLLWTDQMALLAVTDEAGF 64 Query 66 AELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPP 125 AE + AA +P GFVD+ A LAA+ ++LL +WR TR RLH+ LL V DGRKL WFGPP Sbjct 65 AEAVARAATHPTGFVDEGAAALAALPASQLLAEWRTTRNRLHDALLGVADGRKLPWFGPP 124 Query 126 MSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAE 185 M+A SMATARLMETWAHGLDVADALGV RPAT RLRS+AH+GVRTRD+AF V+ LTPPAE Sbjct 125 MAAGSMATARLMETWAHGLDVADALGVRRPATDRLRSVAHIGVRTRDFAFSVHGLTPPAE 184 Query 186 PFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTI 245 PF VEL GPSG+ W WGP DAAQRVTG AEDFC LVTQRRA S LDV+A G DAQ WLTI Sbjct 185 PFRVELTGPSGELWVWGPEDAAQRVTGVAEDFCMLVTQRRAPSQLDVHATGPDAQTWLTI 244 Query 246 AQAFAGPPGRGR 257 AQAFAGPPG GR Sbjct 245 AQAFAGPPGAGR 256 >gi|315446806|ref|YP_004079685.1| hypothetical protein Mspyr1_53260 [Mycobacterium sp. Spyr1] gi|315265109|gb|ADU01851.1| conserved hypothetical protein TIGR03084 [Mycobacterium sp. Spyr1] Length=257 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 184/257 (72%), Positives = 205/257 (80%), Gaps = 1/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA P +A+LRAESD+LDALVA L +W TPAPGWTIAHQI HLLWTDRVA+ AVT Sbjct 1 MAAAAPLIAELRAESDELDALVADLTPQQWTLSTPAPGWTIAHQIAHLLWTDRVAVLAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEA FA+++ AA+A+ + FVD AA ELA + PAELL DWR TR LH+ LLAV DGRKL Sbjct 61 DEARFADVV-AASAHDSAFVDTAAAELAVLPPAELLADWRTTRAALHDALLAVTDGRKLP 119 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVAD LG +R T RLRSIAH+GVRTRD+AF V+ L Sbjct 120 WFGPPMSAASMATARLMETWAHGLDVADTLGAVRIPTSRLRSIAHIGVRTRDFAFTVHGL 179 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPP EPF V+LR P G TWSWGP DA QRV GSAE FC LVTQRR + LDV A G +A+ Sbjct 180 TPPPEPFHVKLRAPDGSTWSWGPEDADQRVEGSAEHFCMLVTQRRPRAALDVVATGHEAE 239 Query 241 RWLTIAQAFAGPPGRGR 257 RWLTIAQAFAGPPG GR Sbjct 240 RWLTIAQAFAGPPGAGR 256 >gi|145221442|ref|YP_001132120.1| wyosine base formation [Mycobacterium gilvum PYR-GCK] gi|145213928|gb|ABP43332.1| Wyosine base formation [Mycobacterium gilvum PYR-GCK] Length=260 Score = 354 bits (908), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 185/257 (72%), Positives = 204/257 (80%), Gaps = 1/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA P +A+LRAESD+LDALVA L +W TPAPGWTIAHQI HLLWTDRVA+ AVT Sbjct 4 MAAAAPLIAELRAESDELDALVADLTPQQWTLSTPAPGWTIAHQIAHLLWTDRVAVLAVT 63 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DEA FA+++ AA+A+ + FVD AA ELA + PAELL DWR TR LH+ LLAV DGRKL Sbjct 64 DEARFADVV-AASAHDSAFVDTAAAELAVLPPAELLADWRTTRAALHDALLAVTDGRKLP 122 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAASMATARLMETWAHGLDVAD LG +R T RLRSIAH+GVRTRD+AF V+ L Sbjct 123 WFGPPMSAASMATARLMETWAHGLDVADTLGTVRIPTSRLRSIAHIGVRTRDFAFAVHGL 182 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPP EPF V+LR P G TWSWG DA QRV GSAE FC LVTQRR + LDV A G DAQ Sbjct 183 TPPPEPFHVKLRAPDGSTWSWGTEDADQRVEGSAEHFCMLVTQRRPPAALDVVATGPDAQ 242 Query 241 RWLTIAQAFAGPPGRGR 257 RWLTIAQAFAGPPG GR Sbjct 243 RWLTIAQAFAGPPGAGR 259 >gi|226361031|ref|YP_002778809.1| hypothetical protein ROP_16170 [Rhodococcus opacus B4] gi|226239516|dbj|BAH49864.1| hypothetical protein [Rhodococcus opacus B4] Length=263 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 174/258 (68%), Positives = 191/258 (75%), Gaps = 1/258 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA+ F+ DL AESD LDALVA LP RWADPTPA GWTIAHQIGHLLWTD AL A+T Sbjct 1 MAELQRFIDDLCAESDSLDALVAELPDSRWADPTPAAGWTIAHQIGHLLWTDEAALLAIT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GF E +T AA+NP GFVD A E A SPAELL WR R RL E LLAVP G+K+ Sbjct 61 DPDGFTEQLTVAASNPGGFVDAGAAEHARRSPAELLAAWRSARTRLAEALLAVPPGQKIL 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPM AASMATARLMETWAHG DVAD LGV R T+RL+SIAHLGVRTRD+A+ VN L Sbjct 121 WYGPPMKAASMATARLMETWAHGQDVADTLGVPRKPTERLKSIAHLGVRTRDFAYAVNEL 180 Query 181 TPPAEPFLVELRGPSG-DTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDA 239 PPA+ F VEL P G W+WGP DAAQ+VTG AEDFC LVTQR + L + A G DA Sbjct 181 APPADEFRVELTAPDGVSVWTWGPEDAAQKVTGPAEDFCLLVTQRANRADLALEATGADA 240 Query 240 QRWLTIAQAFAGPPGRGR 257 WL IAQAFAGP G GR Sbjct 241 DAWLNIAQAFAGPAGGGR 258 >gi|111018931|ref|YP_701903.1| hypothetical protein RHA1_ro01934 [Rhodococcus jostii RHA1] gi|110818461|gb|ABG93745.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=263 Score = 331 bits (849), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 174/258 (68%), Positives = 191/258 (75%), Gaps = 1/258 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA+ F+ DL AESD LDALVA LP RWADPTPA GWTIAHQIGHLLWTD AL A+T Sbjct 1 MAELQRFIDDLCAESDSLDALVADLPDSRWADPTPAEGWTIAHQIGHLLWTDEAALLAIT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GF E +T AA+NPAGFVD A E A PAELL WR R RL E LL+VP G+K+ Sbjct 61 DPDGFTEQLTVAASNPAGFVDAGAEEHARRQPAELLAAWRSARARLAEALLSVPPGQKIL 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPM AASMATARLMETWAHG DVADAL V R T+RL+SIAHLGVRTRD+A+ VN L Sbjct 121 WYGPPMKAASMATARLMETWAHGQDVADALSVPRTPTERLKSIAHLGVRTRDFAYAVNEL 180 Query 181 TPPAEPFLVELRGPSG-DTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDA 239 PPAE F VEL P G W+WGP DAAQ+VTG AEDFC LVTQR + L + A G DA Sbjct 181 APPAEEFRVELTAPDGVSVWTWGPEDAAQKVTGPAEDFCLLVTQRANRADLALEATGADA 240 Query 240 QRWLTIAQAFAGPPGRGR 257 WL IAQAFAGP G GR Sbjct 241 DTWLNIAQAFAGPAGGGR 258 >gi|169632003|ref|YP_001705652.1| hypothetical protein MAB_4930 [Mycobacterium abscessus ATCC 19977] gi|169243970|emb|CAM64998.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=259 Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 170/250 (68%), Positives = 194/250 (78%), Gaps = 0/250 (0%) Query 8 VADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFAE 67 + DLRAESD+LDALVA LP WA TPA GWTIAHQI HL WTD +L AVTD A FAE Sbjct 9 IDDLRAESDELDALVAALPEQGWARDTPAAGWTIAHQIAHLHWTDAQSLLAVTDPAVFAE 68 Query 68 LMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPPMS 127 + A A+P GFVD AA E A + PA+LL WR TR +LH L AVPDG K+ W+GPPMS Sbjct 69 ELPKAMADPLGFVDKAAEETAQIPPADLLIQWRSTRNQLHAALRAVPDGVKIPWYGPPMS 128 Query 128 AASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEPF 187 AASM TARLMETWAHGLDVADALGV T R++SIAHLGVRTRD+AF V+ L P+EPF Sbjct 129 AASMGTARLMETWAHGLDVADALGVPLAPTPRIKSIAHLGVRTRDFAFSVHGLPAPSEPF 188 Query 188 LVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIAQ 247 VEL GP DTW+WGP +AAQRVTGSA DFC+LVTQRR + LD+ A G+DA++WL+IAQ Sbjct 189 RVELTGPDADTWTWGPEEAAQRVTGSALDFCYLVTQRRPRADLDLRATGQDAEQWLSIAQ 248 Query 248 AFAGPPGRGR 257 AFAGPPG GR Sbjct 249 AFAGPPGAGR 258 >gi|229490586|ref|ZP_04384424.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229322406|gb|EEN88189.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=273 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 163/257 (64%), Positives = 183/257 (72%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA+ F+ DLRAE + LDALVA LP ++WA TPA GWTIAHQIGHL WTD A+ A+T Sbjct 1 MAELQTFIDDLRAEGESLDALVADLPEEKWATMTPAEGWTIAHQIGHLHWTDSAAILAIT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GFAE + AA NPAGFVDD A E AA PAELL DWR R L E L A P G K Sbjct 61 DPDGFAEQLKAAFVNPAGFVDDGAAEQAARQPAELLADWRAGRTALVEALTAAPAGTKFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPM SMATARLMETWAHG DVADALGV R T R+++IAHLGVRTR++A+ VN Sbjct 121 WYGPPMGGVSMATARLMETWAHGQDVADALGVERAPTARIKNIAHLGVRTRNFAYSVNEK 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPA+ F VEL P G W+WGP DA Q+VTG A DFC LVTQR + LD+ AVG DA Sbjct 181 TPPADDFRVELTAPDGSLWTWGPEDAPQKVTGPALDFCLLVTQRANRADLDLVAVGADAD 240 Query 241 RWLTIAQAFAGPPGRGR 257 WL AQAFAGP G GR Sbjct 241 EWLGFAQAFAGPSGEGR 257 >gi|226305240|ref|YP_002765198.1| hypothetical protein RER_17510 [Rhodococcus erythropolis PR4] gi|226184355|dbj|BAH32459.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=279 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 160/257 (63%), Positives = 183/257 (72%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA+ F+ DLRAE + LDALVA LP ++WA TPA GW++AHQIGHL WTD A+ A+T Sbjct 14 MAELQTFIDDLRAEGESLDALVADLPEEKWATMTPAEGWSVAHQIGHLHWTDSAAILAIT 73 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GFAE + AA NPAGFVDD A E AA PAELL DWR R L E L A P G K Sbjct 74 DPDGFAEQLKAAFVNPAGFVDDGAAEQAARPPAELLADWRAGRTALVEALTAAPSGTKFP 133 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPM SMATARLMETWAHG DVADALGV R T R+++IAHLGVRTR++A+ VN Sbjct 134 WYGPPMGGVSMATARLMETWAHGQDVADALGVERAPTARIKNIAHLGVRTRNFAYSVNEK 193 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPA+ F VEL P G W+WGP D+ Q+VTG A DFC LVTQR + LD+ AVG DA Sbjct 194 TPPADDFRVELTAPDGSLWTWGPEDSPQKVTGPALDFCLLVTQRANRADLDLVAVGADAD 253 Query 241 RWLTIAQAFAGPPGRGR 257 WL AQAFAGP G GR Sbjct 254 EWLGFAQAFAGPSGEGR 270 >gi|297193722|ref|ZP_06911120.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723475|gb|EDY67383.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=268 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 161/257 (63%), Positives = 185/257 (72%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M+DP + DLR+ES++LD LV L RWA PTPAPGW++AHQI HL WTD ALTAVT Sbjct 1 MSDPAVVLDDLRSESEELDQLVRELDPGRWAAPTPAPGWSVAHQIAHLAWTDAAALTAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GFA + A A P FVDD A AA+ P ELL WR R L + L + P GR+ Sbjct 61 DPDGFAAEVEKALAAPHSFVDDGAQAGAALPPGELLARWRAGRETLLQALRSAPAGRRFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMSAASMATARLMETWAHG D+ADALGV+R T RL +A LGVRTRD+AF V+ L Sbjct 121 WYGPPMSAASMATARLMETWAHGQDIADALGVVRQPTARLAQVARLGVRTRDFAFGVHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPF VEL GP G++W++GP +AAQRVTG A DFC LVTQR L + A G DA Sbjct 181 TPPAEPFRVELTGPGGESWTYGPEEAAQRVTGPALDFCLLVTQRAHRDDLALRAEGADAD 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLDIAQAFAGPPGSGR 257 >gi|333918113|ref|YP_004491694.1| hypothetical protein AS9A_0437 [Amycolicicoccus subflavus DQS3-9A1] gi|333480334|gb|AEF38894.1| hypothetical protein AS9A_0437 [Amycolicicoccus subflavus DQS3-9A1] Length=269 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 163/261 (63%), Positives = 188/261 (73%), Gaps = 4/261 (1%) Query 1 MADPGPFVA----DLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVAL 56 M+DPG VA DL AESD LDALVA LP W+ PTPA GWTIAHQIGHL WTD ++ Sbjct 1 MSDPGRLVAEVVDDLDAESDALDALVADLPESAWSTPTPAEGWTIAHQIGHLAWTDDASI 60 Query 57 TAVTDEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDG 116 A TD F E++T A +NPAGFVD+AA E AA P ELL WR R +L + L G Sbjct 61 AAATDPERFQEIVTLAWSNPAGFVDEAAAEWAAAPPGELLARWRSGRAQLSKALRNTEPG 120 Query 117 RKLAWFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFI 176 KL WFGPPMS SMA+AR+METWAHGLDVAD+L V T RL+ +AH+GVR RD+AF Sbjct 121 TKLPWFGPPMSPVSMASARMMETWAHGLDVADSLDVDVQPTSRLKHVAHIGVRARDFAFA 180 Query 177 VNNLTPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVG 236 +N L P EPF VEL P G WSWGP DA+QRVTG+A DFC LVTQRR ++ LDV A G Sbjct 181 LNQLEAPKEPFRVELTAPDGTIWSWGPEDASQRVTGTALDFCCLVTQRRNITELDVGATG 240 Query 237 EDAQRWLTIAQAFAGPPGRGR 257 DA++WLTIAQAFAGPPG+GR Sbjct 241 PDAEKWLTIAQAFAGPPGKGR 261 >gi|302560056|ref|ZP_07312398.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302477674|gb|EFL40767.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length=264 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 163/257 (64%), Positives = 183/257 (72%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADP + DL AESD+LD LVA + A RW TPA GW +AHQI HL WTDR AL AVT Sbjct 1 MADPTRVIDDLCAESDELDRLVAGVEAGRWGTATPAAGWDVAHQIAHLAWTDRSALLAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GF EL+ A A P FVD+ A E A +PAELL WR R L + L P G + Sbjct 61 DADGFRELVERALAAPHTFVDEGAEEYARAAPAELLARWREGRAALEKALREAPAGARFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMSAASMATARLMETWAHGLDVADALGV+RP + RLR +A LGVRTRD+A+ V+ L Sbjct 121 WYGPPMSAASMATARLMETWAHGLDVADALGVVRPPSDRLRHVAWLGVRTRDFAYGVHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPF VEL GP G W++GP DAAQRVTG A DFC LVTQR + L + G DA Sbjct 181 TPPAEPFRVELTGPGGGVWAYGPEDAAQRVTGPALDFCLLVTQRAHRADLALTTDGPDAD 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLDIAQAFAGPPGGGR 257 >gi|326384233|ref|ZP_08205915.1| wyosine base formation [Gordonia neofelifaecis NRRL B-59395] gi|326197098|gb|EGD54290.1| wyosine base formation [Gordonia neofelifaecis NRRL B-59395] Length=264 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 159/251 (64%), Positives = 185/251 (74%), Gaps = 0/251 (0%) Query 7 FVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFA 66 V L+AES+ LD LVA LP + W+ PTPA GWTIAHQIGHL WTDRV+L +VTD GF Sbjct 4 LVQALQAESESLDDLVAALPVEAWSTPTPAEGWTIAHQIGHLHWTDRVSLLSVTDPDGFQ 63 Query 67 ELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPPM 126 L+ A +P GFVD A AA PAELL DWR TR RL L+AVPDG KL WFGPPM Sbjct 64 ALLAEAMGDPMGFVDAGAEAEAARPPAELLADWRKTRARLAGALIAVPDGTKLNWFGPPM 123 Query 127 SAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEP 186 SA SMATARLMETWAHGLDVADALGV R A R++++ HLGVRTR++A++VN L PAE Sbjct 124 SAPSMATARLMETWAHGLDVADALGVERVADDRIKNVVHLGVRTRNFAYMVNGLEAPAEE 183 Query 187 FLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIA 246 F E+ PSG+ W+WGP A+ V G A DFC L+TQRR LS L ++ +G DAQ+W TIA Sbjct 184 FRFEITAPSGEVWTWGPEGASNVVRGPAVDFCELITQRRHLSDLALDVIGADAQKWATIA 243 Query 247 QAFAGPPGRGR 257 QAFAGPPG GR Sbjct 244 QAFAGPPGGGR 254 >gi|291438955|ref|ZP_06578345.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291341850|gb|EFE68806.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=264 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 159/257 (62%), Positives = 181/257 (71%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M+DP P + DLR ES++LD LVA L ++WA TPAPGWT+AHQI HL WTD AL AVT Sbjct 1 MSDPTPVIDDLREESEELDRLVAGLGPEQWARRTPAPGWTVAHQIAHLAWTDHSALLAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GF EL+ A A P FVDD A E A +P LL WR R L L + P G + Sbjct 61 DADGFRELVEGALAAPQSFVDDGAEEYARSAPDALLARWREGRAALERALRSAPPGARFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMSAASMATARLMETWAHGLDVADALG +RP T RLR + LGVRTRD+A+ + L Sbjct 121 WYGPPMSAASMATARLMETWAHGLDVADALGAVRPPTDRLRHVVRLGVRTRDFAYGAHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPA+PF VEL PSG+ W+ GP DA QRVTG A DFC LVTQR + L + A G DA Sbjct 181 TPPADPFRVELVAPSGELWTHGPEDAPQRVTGPALDFCLLVTQRAHRADLALTADGPDAD 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLDIAQAFAGPPGAGR 257 >gi|312140991|ref|YP_004008327.1| wyosine base formation protein [Rhodococcus equi 103S] gi|311890330|emb|CBH49648.1| putative wyosine base formation protein [Rhodococcus equi 103S] Length=266 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 162/257 (64%), Positives = 177/257 (69%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MAD V DL AE LDALVA LP ++WA TPA GWT+AHQIGHL WTDR AL A T Sbjct 1 MADLNKIVDDLCAEGAALDALVADLPDEKWAVATPAEGWTVAHQIGHLAWTDRAALLAAT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE F + A NP GFVD+ A A P ELL DWR R RL + L VP G KL Sbjct 61 DEDAFTAQLAEAWKNPYGFVDEGAEAEAQRPPRELLADWRECRARLAQILRDVPPGTKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMSAASMATARLMETWAHG DVA ALGV +T RL IA LGVRTRD+A+ VN + Sbjct 121 WYGPPMSAASMATARLMETWAHGRDVAAALGVAAESTDRLEHIARLGVRTRDFAYSVNEI 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPP E F VEL P G TW+WGP DA QRVTG AEDFC LVTQR + A G+DA+ Sbjct 181 TPPTEEFRVELVAPDGGTWAWGPDDAPQRVTGPAEDFCLLVTQRVHRRDTALRATGDDAR 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLDIAQAFAGPPGAGR 257 >gi|325675372|ref|ZP_08155056.1| wyosine base formation superfamily protein [Rhodococcus equi ATCC 33707] gi|325553343|gb|EGD23021.1| wyosine base formation superfamily protein [Rhodococcus equi ATCC 33707] Length=276 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 161/257 (63%), Positives = 177/257 (69%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 +AD V DL AE LDALVA LP ++WA TPA GWT+AHQIGHL WTDR AL A T Sbjct 11 VADLNKIVDDLCAEGAALDALVADLPDEKWAVATPAEGWTVAHQIGHLAWTDRAALLAAT 70 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE F + A NP GFVD+ A A P ELL DWR R RL + L VP G KL Sbjct 71 DEDAFTAQLAEAWKNPYGFVDEGAEAEAQRPPRELLADWRECRARLAQILRDVPPGTKLP 130 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMSAASMATARLMETWAHG DVA ALGV +T RL IA LGVRTRD+A+ VN + Sbjct 131 WYGPPMSAASMATARLMETWAHGRDVAAALGVAAESTDRLEHIARLGVRTRDFAYSVNEI 190 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPP E F VEL P G TW+WGP DA QRVTG AEDFC LVTQR + A G+DA+ Sbjct 191 TPPTEEFRVELVAPDGGTWAWGPDDAPQRVTGPAEDFCLLVTQRVHRRDTALRATGDDAR 250 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 251 RWLDIAQAFAGPPGAGR 267 >gi|297200470|ref|ZP_06917867.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197709592|gb|EDY53626.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=264 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 156/257 (61%), Positives = 180/257 (71%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADP P + DL AES++LD LVA L ++W+ PTPAPGWT+AHQI HL WTD +L AVT Sbjct 1 MADPTPVIDDLCAESEELDLLVAELSQEQWSLPTPAPGWTVAHQIAHLAWTDHSSLLAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D+ F+ + A A P FVD+ A E A PA LL WR R L E L A P+G + Sbjct 61 DQKAFSREVEKAMAAPGDFVDEGAEEGARKPPARLLAYWRAGREDLAEALRAAPEGARFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMS ASMATARLMETWAHGLDVAD LGV R T R+R I LGVRTRD+AF V+ L Sbjct 121 WYGPPMSTASMATARLMETWAHGLDVADTLGVTRAPTDRIRHIVRLGVRTRDFAFGVHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPP EPF +EL PSG+ W+ GP DA RVTG A DFC LVTQR + L + A GEDA Sbjct 181 TPPFEPFRIELTAPSGELWTHGPEDATDRVTGPALDFCLLVTQRAHRADLALRAEGEDAG 240 Query 241 RWLTIAQAFAGPPGRGR 257 +WL IAQAFAGPPG GR Sbjct 241 QWLDIAQAFAGPPGAGR 257 >gi|329941356|ref|ZP_08290635.1| hypothetical protein SGM_6127 [Streptomyces griseoaurantiacus M045] gi|329299887|gb|EGG43786.1| hypothetical protein SGM_6127 [Streptomyces griseoaurantiacus M045] Length=269 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 157/257 (62%), Positives = 176/257 (69%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M+DP P + DL ES++LD LVA LPA+RW PTPAPGW+IAHQI HL WTDR AL AVT Sbjct 1 MSDPTPVLDDLYEESEELDRLVADLPAERWRRPTPAPGWSIAHQIAHLAWTDRSALVAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GF L+ A A P FVD A E AA P LL DWR R L + L A P G + Sbjct 61 DPDGFGALVEQAVAAPGTFVDRGAEEGAAHPPDVLLADWREGRAALRKALCAAPPGARFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMS ASMAT RLMETWAHG DVADALGV R RLR I +GVR RD+AF+ + L Sbjct 121 WYGPPMSTASMATGRLMETWAHGQDVADALGVTRTPALRLRHIVRIGVRARDFAFLTHQL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PPAE F VE+ P G W++GP DAAQRVTG A DFC LVTQR + L V A G +A Sbjct 181 APPAEEFRVEVTAPDGTLWAYGPEDAAQRVTGPALDFCLLVTQRAHRADLAVRAEGPEAD 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLDIAQAFAGPPGAGR 257 >gi|262203695|ref|YP_003274903.1| wyosine base formation [Gordonia bronchialis DSM 43247] gi|262087042|gb|ACY23010.1| wyosine base formation [Gordonia bronchialis DSM 43247] Length=269 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 160/251 (64%), Positives = 176/251 (71%), Gaps = 0/251 (0%) Query 7 FVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFA 66 VADL AESD LDALVA L WA PT A GWTIAHQI HL WTD A A FA Sbjct 7 LVADLTAESDQLDALVAGLDDSAWATPTAAAGWTIAHQIAHLAWTDEAAALAARHPDRFA 66 Query 67 ELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPPM 126 E + AA NP GFVD AA AA P +LT WR R L E L+AVPDG K+ WFGPPM Sbjct 67 EELEVAATNPEGFVDAAADAGAAKPPTAILTHWREVRAGLAEVLIAVPDGVKIPWFGPPM 126 Query 127 SAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEP 186 SAASMATARLMETWAHGLDVADALGV P T R+R +AH+GVRTRDYA++VN TPP++P Sbjct 127 SAASMATARLMETWAHGLDVADALGVALPVTDRIRGVAHIGVRTRDYAYLVNGATPPSQP 186 Query 187 FLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIA 246 F EL PSG+ WSWGP DA V G A DFC LVTQRR + LD++ VG DA W+ IA Sbjct 187 FRYELTAPSGELWSWGPDDATDIVRGPAVDFCQLVTQRRHPADLDLDVVGSDATEWVRIA 246 Query 247 QAFAGPPGRGR 257 Q FAGPPG GR Sbjct 247 QCFAGPPGTGR 257 >gi|317505928|ref|ZP_07963761.1| hypothetical protein HMPREF9336_00130 [Segniliparus rugosus ATCC BAA-974] gi|316255774|gb|EFV15011.1| hypothetical protein HMPREF9336_00130 [Segniliparus rugosus ATCC BAA-974] Length=259 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 157/257 (62%), Positives = 178/257 (70%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MA+ VADL AE + +D LVA LPA +W PTP+ GWT+AHQIGHL WTD +AL + T Sbjct 1 MAELALIVADLVAEGEAVDGLVADLPAGQWRAPTPSDGWTVAHQIGHLAWTDDIALLSAT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GFA + A A VDD A E AA ELL WR R L LL VP+ KL Sbjct 61 DAEGFARAVAEQADRAATLVDDGAAERAARPHDELLASWRNGRASLARRLLDVPEKAKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMS ASMATAR+METWAHGLDVADALG PAT RL+ +AH+GVR RD+AF+VN L Sbjct 121 WFGPPMSPASMATARIMETWAHGLDVADALGEPWPATSRLKHVAHIGVRARDFAFLVNGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PP E F VEL P G+ W+WGP DA QRV A DFC+LV QRR STLDV A GEDA+ Sbjct 181 VPPEEEFRVELAAPDGELWAWGPQDARQRVAAPALDFCYLVCQRRPPSTLDVVAEGEDAR 240 Query 241 RWLTIAQAFAGPPGRGR 257 RW+ IAQAFAGPPG R Sbjct 241 RWIAIAQAFAGPPGSRR 257 >gi|343927836|ref|ZP_08767304.1| hypothetical protein GOALK_097_02660 [Gordonia alkanivorans NBRC 16433] gi|343762477|dbj|GAA14230.1| hypothetical protein GOALK_097_02660 [Gordonia alkanivorans NBRC 16433] Length=267 Score = 294 bits (752), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 160/251 (64%), Positives = 179/251 (72%), Gaps = 1/251 (0%) Query 8 VADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFAE 67 VADL AESD LDALVA L WA PTPAPGWTIAHQI HL WTD VA A TD F E Sbjct 12 VADLEAESDQLDALVADLDDAGWATPTPAPGWTIAHQIAHLAWTDEVAAIAATDPERFTE 71 Query 68 LMTAAAAN-PAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPPM 126 L+T A N P +VDDAA A E+L WR+ R +L + L VP G K+ WFGPPM Sbjct 72 LVTEALQNSPETYVDDAAEAGAGAPVEEILAGWRLARAKLADALREVPQGVKIPWFGPPM 131 Query 127 SAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEP 186 SAASMATARLMETWAHGLDVADALGV + R+R +AH+GVRTRD+A+IVNN PPAEP Sbjct 132 SAASMATARLMETWAHGLDVADALGVTVLPSDRIRHVAHIGVRTRDFAYIVNNKVPPAEP 191 Query 187 FLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIA 246 F L PSG+ W+WGP DA+ V GSA DFC LVTQRRA++ LD+ VGEDA W IA Sbjct 192 FHYALTSPSGELWTWGPEDASNIVRGSALDFCQLVTQRRAVADLDLEFVGEDALEWSGIA 251 Query 247 QAFAGPPGRGR 257 Q FAGPPG GR Sbjct 252 QCFAGPPGAGR 262 >gi|54027594|ref|YP_121836.1| hypothetical protein nfa56200 [Nocardia farcinica IFM 10152] gi|54019102|dbj|BAD60472.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=263 Score = 291 bits (744), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 157/257 (62%), Positives = 172/257 (67%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MAD + D E DL+ LVA L +WA PTPAPGWTIAHQIGHL WTD VA A T Sbjct 1 MADLEALLGDYAEECADLERLVAPLSEAQWATPTPAPGWTIAHQIGHLAWTDEVATVAAT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D FA ++ A FVD+AA E A PA+LL WR R L L VP G KL Sbjct 61 DAEKFAGMVAEAGPRALTFVDEAAEEAATQPPADLLRRWRTGREALMTALREVPAGTKLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMS ASM TARLMETWAHG DVADALGV R RLRS+AH+GVRTR++A+ V Sbjct 121 WFGPPMSPASMITARLMETWAHGQDVADALGVTREPAMRLRSVAHIGVRTRNFAYSVRGK 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAE F VEL P G W+WGP+DAAQRVTG A DFC LVTQRR L V A G+DA Sbjct 181 TPPAEEFRVELTAPDGSLWTWGPADAAQRVTGPAVDFCLLVTQRRHPDDLAVRAQGQDAA 240 Query 241 RWLTIAQAFAGPPGRGR 257 WLTIAQAFAGP G GR Sbjct 241 EWLTIAQAFAGPTGAGR 257 >gi|296394807|ref|YP_003659691.1| wyosine base formation domain-containing protein [Segniliparus rotundus DSM 44985] gi|296181954|gb|ADG98860.1| Wyosine base formation domain protein [Segniliparus rotundus DSM 44985] Length=269 Score = 288 bits (736), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 158/257 (62%), Positives = 179/257 (70%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M P +ADL AE D ++ALVA L W TP+ GWT+AHQIGHLLWTD VA AV Sbjct 1 MVSPAAVLADLVAEGDAVEALVAALEPPLWRTQTPSAGWTVAHQIGHLLWTDAVAAVAVA 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 FA L+ AA A VD A E AA P EL WR R L E++ A+P+G + Sbjct 61 GPDRFARLVQEKAALGAAMVDIGAQEHAARPPHELFQAWRHGRRELAEQIAALPEGAAVP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 WFGPPMSAAS ATARLMETWAHGLD+ADALG PAT RL+ +AH+GVR RDYAF+VN L Sbjct 121 WFGPPMSAASFATARLMETWAHGLDIADALGAAWPATNRLQHVAHIGVRARDYAFLVNGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPF VEL P G TW+WGP AAQRV GSA DFC LV QRR STL + A G+DA+ Sbjct 181 TPPAEPFRVELAAPDGQTWAWGPEHAAQRVAGSALDFCHLVCQRRPPSTLGLVADGDDAR 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWLT+AQAFAGPPG R Sbjct 241 RWLTVAQAFAGPPGSRR 257 >gi|302552253|ref|ZP_07304595.1| wyosine base formation domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302469871|gb|EFL32964.1| wyosine base formation domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length=264 Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 157/257 (62%), Positives = 178/257 (70%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M+DP + DL ES++LD LVA A+ WA TPAPGWT+AHQI HL WTDR AL AVT Sbjct 1 MSDPTTVIDDLHEESEELDRLVAGSSAEHWALATPAPGWTVAHQISHLAWTDRSALLAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D GF L+ A P FVD+ A E A + PAELL WR R L L A P + Sbjct 61 DADGFRALVEKALTAPGSFVDEGAEEDAGLPPAELLARWRDGRAALERALRAAPPKARFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMSAASMATARLMETWAHG DVADALGV+RP T RLR +A LGVRTRD+A+ + L Sbjct 121 WYGPPMSAASMATARLMETWAHGQDVADALGVVRPPTDRLRHVAWLGVRTRDFAYGAHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PP +PF VELR PSGD W++GP A QRVTG A DFC LVTQR L ++A G DA Sbjct 181 IPPTDPFRVELRAPSGDVWTYGPEGAPQRVTGPALDFCLLVTQRAHRCDLALHADGPDAD 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLDIAQAFAGPPGSGR 257 >gi|289770055|ref|ZP_06529433.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289700254|gb|EFD67683.1| conserved hypothetical protein [Streptomyces lividans TK24] Length=270 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 152/249 (62%), Positives = 171/249 (69%), Gaps = 0/249 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M+DP P + DLR ES++LDALVA L + W TPAPGWTIAHQI HL WTDR AL AVT Sbjct 1 MSDPTPVIDDLREESEELDALVAELSPEGWRRATPAPGWTIAHQIAHLNWTDRAALAAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE GF L+ A A P +VDD A E A PA LLT WR R L E L G + Sbjct 61 DEDGFRALVEQALAAPDRYVDDGAEEGAKQDPAALLTAWREGRAALDEALRTAAPGARFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPM+ ASMATARLMETWAHGLD+A ALGV RP T RLR +A +GVR RD+A + L Sbjct 121 WYGPPMATASMATARLMETWAHGLDIAAALGVTRPPTGRLRHVARIGVRARDFAHAAHGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPF VEL GP GD W++GP DA QRVTG A DFC L TQR + L + A G DA Sbjct 181 TPPAEPFRVELTGPGGDLWTYGPEDATQRVTGPALDFCLLATQRAHRADLALTAEGPDAD 240 Query 241 RWLTIAQAF 249 RWL IAQAF Sbjct 241 RWLDIAQAF 249 >gi|297158285|gb|ADI07997.1| hypothetical protein SBI_04877 [Streptomyces bingchenggensis BCW-1] Length=320 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 155/257 (61%), Positives = 175/257 (69%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M+D + DL AE ++LD LVA L + WA PTPA GWTIAHQI HL WTD A A T Sbjct 1 MSDTEVVLGDLLAEGEELDGLVAGLAEEAWAAPTPAAGWTIAHQIAHLAWTDERAAQAAT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D AGFA + AAA P FVD+AA AA PAELL WR R +L L P G +L Sbjct 61 DPAGFAAEVRKAAAEPDTFVDEAAEAGAAQPPAELLRRWREGREQLRRVLAGQPAGARLP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GP MS ASMATARLMETWAHG DVADALGV R T RLR +A +GVR R +A+ V L Sbjct 121 WYGPSMSVASMATARLMETWAHGQDVADALGVRRAPTTRLRHVARIGVRARGFAYAVRGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 PPAE F VELR P G+ W++GP DA QRVTG A DFC LVTQR + L V A G DA+ Sbjct 181 EPPAEEFRVELRAPDGELWTYGPEDAPQRVTGPALDFCLLVTQRAHRADLAVRAEGPDAE 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG+GR Sbjct 241 RWLDIAQAFAGPPGKGR 257 >gi|290959527|ref|YP_003490709.1| hypothetical protein SCAB_51241 [Streptomyces scabiei 87.22] gi|260649053|emb|CBG72167.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=277 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 152/258 (59%), Positives = 174/258 (68%), Gaps = 1/258 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 MADP P + DL AES LD LVA L ++WA PTPAPGWT+AHQI HL WTD ++ AVT Sbjct 13 MADPTPVIDDLHAESSQLDLLVAELSPEQWALPTPAPGWTVAHQIAHLAWTDHSSVLAVT 72 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D+A FA + +A P FVD A E A L+ DWR R L + L A P+G + Sbjct 73 DQAAFAREVESALTAPGDFVDRGAEEGAGKPSERLVADWRAGRAALEDALRAAPEGARFP 132 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPA-TQRLRSIAHLGVRTRDYAFIVNN 179 W+GPPMS ASMATARLMETWAHGLDVADALGV R A RLR I LG+RTRD+AF V+ Sbjct 133 WYGPPMSTASMATARLMETWAHGLDVADALGVPRIAPGDRLRHITRLGIRTRDFAFGVHG 192 Query 180 LTPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDA 239 LTPP E F VEL P G+ W++GP DA RV G A DFC LVTQR L ++ G DA Sbjct 193 LTPPFEEFRVELTSPGGELWTYGPEDATDRVGGPALDFCLLVTQRAHRGDLALHTEGADA 252 Query 240 QRWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 253 DRWLDIAQAFAGPPGAGR 270 >gi|21222768|ref|NP_628547.1| hypothetical protein SCO4378 [Streptomyces coelicolor A3(2)] gi|8894728|emb|CAB95889.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length=276 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 151/249 (61%), Positives = 171/249 (69%), Gaps = 0/249 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 ++DP P + DLR ES++LDALVA L + W TPAPGWTIAHQI HL WTDR AL AVT Sbjct 7 VSDPTPVIDDLREESEELDALVAELSPEGWRRATPAPGWTIAHQIAHLNWTDRAALAAVT 66 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 DE GF L+ A A P +VDD A E A PA LLT WR R L E L G + Sbjct 67 DEDGFRALVEQALAAPDRYVDDGAEEGAKQDPAALLTAWREGRAALAEALRTAAPGARFP 126 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPM+ ASMATARLMETWAHGLD+A ALGV RP T RLR +A +GVR RD+A + L Sbjct 127 WYGPPMATASMATARLMETWAHGLDIAAALGVTRPPTGRLRHVARIGVRARDFAHAAHGL 186 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 TPPAEPF VEL GP GD W++GP DA QRVTG A DFC L TQR + L + A G DA Sbjct 187 TPPAEPFRVELTGPGGDLWTYGPEDATQRVTGPALDFCLLATQRAHRADLALTAEGPDAD 246 Query 241 RWLTIAQAF 249 RWL IAQAF Sbjct 247 RWLDIAQAF 255 >gi|284028114|ref|YP_003378045.1| Wyosine base formation domain-containing protein [Kribbella flavida DSM 17836] gi|283807407|gb|ADB29246.1| Wyosine base formation domain protein [Kribbella flavida DSM 17836] Length=262 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 150/250 (60%), Positives = 171/250 (69%), Gaps = 0/250 (0%) Query 8 VADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFAE 67 +ADL AES +LD LV L AD WA PTPA GWT+AHQI HL WTD AL AVTD F Sbjct 7 LADLWAESTELDMLVGGLAADGWATPTPAEGWTVAHQIAHLAWTDEAALRAVTDPDAFQA 66 Query 68 LMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPPMS 127 ++ AAA+PAG VD A E AA+ ELL WR TR L E L VP G+K+ WFGPPMS Sbjct 67 VLDHAAADPAGHVDRGAAEGAALPAEELLPYWRETRAELAEALKQVPAGQKVPWFGPPMS 126 Query 128 AASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEPF 187 SMATARLMETWAHG DV D LGV R + RLR +AHL VR RD+++++++ PPA PF Sbjct 127 PVSMATARLMETWAHGQDVVDGLGVTRQPSTRLRHVAHLAVRARDFSYLLHDRKPPAAPF 186 Query 188 LVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIAQ 247 VEL GP G WS+G A QRVTG A DFC L TQRR L V AVG DA+ WL I Q Sbjct 187 HVELTGPDGQIWSYGDESAEQRVTGPALDFCLLATQRRHRDDLAVEAVGADAEEWLGIIQ 246 Query 248 AFAGPPGRGR 257 AFAG PG+GR Sbjct 247 AFAGLPGKGR 256 >gi|345001347|ref|YP_004804201.1| Wyosine base formation domain-containing protein [Streptomyces sp. SirexAA-E] gi|344316973|gb|AEN11661.1| Wyosine base formation domain protein [Streptomyces sp. SirexAA-E] Length=268 Score = 281 bits (719), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 152/249 (62%), Positives = 172/249 (70%), Gaps = 1/249 (0%) Query 10 DLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFAELM 69 DLR ES++LD LVA A+ W+ PTPA GW++AHQI HL WTD VALTAVT+ FA + Sbjct 14 DLRQESEELDLLVAGASAEGWSAPTPAEGWSVAHQIAHLNWTDEVALTAVTEPGAFAAEV 73 Query 70 TAAAANPAGFVDDAATELAAVSPAE-LLTDWRVTRGRLHEELLAVPDGRKLAWFGPPMSA 128 A A P FVD+AA E+ A+ PAE LL WR R RLHE L A P G + W+GP MS Sbjct 74 ERALARPETFVDEAAGEIVALLPAEDLLVQWREGRARLHEALRAAPPGVRFPWYGPSMSV 133 Query 129 ASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEPFL 188 ASMATARLMETWAHG DVADALGV R T RLR +A +GVR RDYA+ V PP EPF Sbjct 134 ASMATARLMETWAHGQDVADALGVHRQPTGRLRHVARIGVRARDYAYAVRGQQPPGEPFR 193 Query 189 VELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIAQA 248 VEL+G G+T GP DAAQRV+G DFC LVTQR L + AVG DA RWL IAQA Sbjct 194 VELKGLEGETVVHGPQDAAQRVSGPLLDFCLLVTQRAHRDDLALTAVGPDADRWLDIAQA 253 Query 249 FAGPPGRGR 257 FAGP G GR Sbjct 254 FAGPAGAGR 262 >gi|294629946|ref|ZP_06708506.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292833279|gb|EFF91628.1| conserved hypothetical protein [Streptomyces sp. e14] Length=272 Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 151/257 (59%), Positives = 173/257 (68%), Gaps = 0/257 (0%) Query 1 MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVT 60 M++P P DLR ES++LD LVA L A++W TPAPGW++AHQI HL WTDR A AVT Sbjct 1 MSEPTPVFDDLRDESEELDRLVAGLGAEQWGLATPAPGWSVAHQIAHLAWTDRSAFLAVT 60 Query 61 DEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLA 120 D F L+ A A P FVD+ A E AA+ P ELL WR R L L G + Sbjct 61 DPERFRALVEKALAAPDAFVDEGAEEGAALPPEELLARWREGRAALDRALRDSAPGARFP 120 Query 121 WFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNL 180 W+GPPMSAASMAT RLMETWAHG DVADALGV+R T RLR + +GVR RD+AF V L Sbjct 121 WYGPPMSAASMATGRLMETWAHGQDVADALGVVRAPTDRLRHVVRIGVRARDFAFGVRGL 180 Query 181 TPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQ 240 + P E F VE+ PSG W++GP DAAQRVTG A DFC LVTQR + L V A G DA Sbjct 181 SAPGEEFRVEVVAPSGALWTYGPEDAAQRVTGPALDFCLLVTQRAHRADLAVRAEGPDAD 240 Query 241 RWLTIAQAFAGPPGRGR 257 RWL IAQAFAGPPG GR Sbjct 241 RWLDIAQAFAGPPGAGR 257 Lambda K H 0.320 0.133 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 380985698940 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40