BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0038
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607180|ref|NP_214552.1| hypothetical protein Rv0038 [Mycoba... 399 9e-110
gi|289552287|ref|ZP_06441497.1| conserved hypothetical protein [... 398 3e-109
gi|240168764|ref|ZP_04747423.1| hypothetical protein MkanA1_0559... 377 7e-103
gi|342860239|ref|ZP_08716891.1| hypothetical protein MCOL_15220 ... 369 2e-100
gi|41406143|ref|NP_958979.1| hypothetical protein MAP0045 [Mycob... 366 8e-100
gi|296167091|ref|ZP_06849501.1| conserved hypothetical protein [... 366 9e-100
gi|118615966|ref|YP_904298.1| hypothetical protein MUL_0052 [Myc... 366 1e-99
gi|254773097|ref|ZP_05214613.1| hypothetical protein MaviaA2_002... 364 4e-99
gi|108802351|ref|YP_642548.1| hypothetical protein Mmcs_5392 [My... 360 5e-98
gi|254819075|ref|ZP_05224076.1| hypothetical protein MintA_04068... 359 2e-97
gi|15826889|ref|NP_301152.1| hypothetical protein ML0028 [Mycoba... 358 3e-97
gi|13431996|sp|Q50191.1|Y028_MYCLE RecName: Full=UPF0301 protein... 357 4e-97
gi|120406986|ref|YP_956815.1| hypothetical protein Mvan_6057 [My... 353 7e-96
gi|145221444|ref|YP_001132122.1| hypothetical protein Mflv_0850 ... 343 1e-92
gi|118472576|ref|YP_891116.1| hypothetical protein MSMEG_6921 [M... 341 3e-92
gi|333992966|ref|YP_004525580.1| hypothetical protein JDM601_432... 333 7e-90
gi|169632001|ref|YP_001705650.1| hypothetical protein MAB_4928c ... 323 1e-86
gi|289441406|ref|ZP_06431150.1| conserved hypothetical protein [... 302 2e-80
gi|111020619|ref|YP_703591.1| hypothetical protein RHA1_ro03630 ... 287 8e-76
gi|226362862|ref|YP_002780642.1| hypothetical protein ROP_34500 ... 284 5e-75
gi|229491232|ref|ZP_04385060.1| conserved hypothetical protein [... 274 5e-72
gi|226309489|ref|YP_002769451.1| hypothetical protein RER_60040 ... 274 6e-72
gi|333922217|ref|YP_004495798.1| hypothetical protein AS9A_4566 ... 273 1e-71
gi|325677345|ref|ZP_08157010.1| hypothetical protein HMPREF0724_... 272 2e-71
gi|54027485|ref|YP_121727.1| hypothetical protein nfa55110 [Noca... 269 2e-70
gi|312141994|ref|YP_004009330.1| hypothetical protein REQ_47120 ... 260 6e-68
gi|262204631|ref|YP_003275839.1| hypothetical protein Gbro_4833 ... 254 4e-66
gi|296141883|ref|YP_003649126.1| hypothetical protein Tpau_4219 ... 247 7e-64
gi|343928703|ref|ZP_08768148.1| hypothetical protein GOALK_120_0... 240 9e-62
gi|300791132|ref|YP_003771423.1| transcriptional regulator [Amyc... 226 2e-57
gi|302531328|ref|ZP_07283670.1| UPF0301 protein [Streptomyces sp... 222 2e-56
gi|257057894|ref|YP_003135726.1| hypothetical protein Svir_39570... 220 8e-56
gi|340532831|gb|AEK48036.1| hypothetical protein RAM_47855 [Amyc... 214 4e-54
gi|331700372|ref|YP_004336611.1| hypothetical protein Psed_6670 ... 202 2e-50
gi|256381053|ref|YP_003104713.1| hypothetical protein Amir_7076 ... 202 2e-50
gi|326383885|ref|ZP_08205569.1| hypothetical protein SCNU_13168 ... 201 5e-50
gi|134103796|ref|YP_001109457.1| hypothetical protein SACE_7376 ... 192 3e-47
gi|258655491|ref|YP_003204647.1| hypothetical protein Namu_5395 ... 191 7e-47
gi|324998735|ref|ZP_08119847.1| hypothetical protein PseP1_08219... 185 3e-45
gi|319951179|ref|ZP_08025022.1| hypothetical protein ES5_16099 [... 184 8e-45
gi|213966270|ref|ZP_03394454.1| conserved hypothetical protein [... 180 9e-44
gi|296392446|ref|YP_003657330.1| hypothetical protein Srot_0006 ... 179 3e-43
gi|25029483|ref|NP_739537.1| hypothetical protein CE2927 [Coryne... 176 1e-42
gi|259508337|ref|ZP_05751237.1| transcriptional regulator [Coryn... 176 2e-42
gi|296118580|ref|ZP_06837158.1| putative transcriptional regulat... 172 2e-41
gi|227506206|ref|ZP_03936255.1| protein of hypothetical function... 171 7e-41
gi|302331755|gb|ADL21949.1| Hypothetical protein Cp1002_2094 [Co... 169 3e-40
gi|300859511|ref|YP_003784494.1| hypothetical protein cpfrc_0209... 168 3e-40
gi|255324027|ref|ZP_05365152.1| conserved hypothetical protein [... 167 6e-40
gi|19554273|ref|NP_602275.1| hypothetical protein NCgl2978 [Cory... 167 6e-40
>gi|15607180|ref|NP_214552.1| hypothetical protein Rv0038 [Mycobacterium tuberculosis H37Rv]
gi|15839415|ref|NP_334452.1| hypothetical protein MT0043 [Mycobacterium tuberculosis CDC1551]
gi|31791215|ref|NP_853708.1| hypothetical protein Mb0039 [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=202
Score = 399 bits (1026), Expect = 9e-110, Method: Compositional matrix adjust.
Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 1 VVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS 60
+VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS
Sbjct 1 MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS 60
Query 61 ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV 120
ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV
Sbjct 61 ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV 120
Query 121 DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ 180
DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ
Sbjct 121 DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ 180
Query 181 VLRRQPLPLSLLATHPIDLSRN 202
VLRRQPLPLSLLATHPIDLSRN
Sbjct 181 VLRRQPLPLSLLATHPIDLSRN 202
>gi|289552287|ref|ZP_06441497.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|298527436|ref|ZP_07014845.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308378527|ref|ZP_07482878.2| hypothetical protein TMIG_00318 [Mycobacterium tuberculosis SUMu009]
8 more sequence titles
Length=201
Score = 398 bits (1022), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 200/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+APHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE
Sbjct 1 MAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD
Sbjct 61 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV
Sbjct 121 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLPLSLLATHPIDLSRN
Sbjct 181 LRRQPLPLSLLATHPIDLSRN 201
>gi|240168764|ref|ZP_04747423.1| hypothetical protein MkanA1_05595 [Mycobacterium kansasii ATCC
12478]
Length=201
Score = 377 bits (967), Expect = 7e-103, Method: Compositional matrix adjust.
Identities = 187/201 (94%), Positives = 196/201 (98%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+AP EDPED++APAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHN+GGTLGVVLNRPSE
Sbjct 1 MAPQEDPEDYMAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNEGGTLGVVLNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADP+GVPGLRHVAGR+ MVD
Sbjct 61 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPDGVPGLRHVAGRMAMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LDADP++LA VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLV PRADLWGQV
Sbjct 121 LDADPDLLAPVVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVPPRADLWGQV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLPLSLLATHPIDLSRN
Sbjct 181 LRRQPLPLSLLATHPIDLSRN 201
>gi|342860239|ref|ZP_08716891.1| hypothetical protein MCOL_15220 [Mycobacterium colombiense CECT
3035]
gi|342132617|gb|EGT85846.1| hypothetical protein MCOL_15220 [Mycobacterium colombiense CECT
3035]
Length=201
Score = 369 bits (946), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 183/199 (92%), Positives = 192/199 (97%), Gaps = 0/199 (0%)
Query 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETA 63
P EDPED+VAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNR SETA
Sbjct 3 PPEDPEDYVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRASETA 62
Query 64 VYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLD 123
VYNVLPQW KL+AKPKTMFIGGPVKRDAALCLA LRVGADP+GVPGLRHV GR+VMVDLD
Sbjct 63 VYNVLPQWTKLSAKPKTMFIGGPVKRDAALCLATLRVGADPQGVPGLRHVDGRVVMVDLD 122
Query 124 ADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLR 183
ADP+V+A VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPR+DLWGQVLR
Sbjct 123 ADPDVIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRSDLWGQVLR 182
Query 184 RQPLPLSLLATHPIDLSRN 202
RQPLPLSLLATHPID+SRN
Sbjct 183 RQPLPLSLLATHPIDVSRN 201
>gi|41406143|ref|NP_958979.1| hypothetical protein MAP0045 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463947|ref|YP_879352.1| hypothetical protein MAV_0052 [Mycobacterium avium 104]
gi|81415033|sp|Q744T3.1|Y045_MYCPA RecName: Full=UPF0301 protein MAP_0045
gi|166227783|sp|A0Q8W4.1|Y052_MYCA1 RecName: Full=UPF0301 protein MAV_0052
gi|41394491|gb|AAS02362.1| hypothetical protein MAP_0045 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165234|gb|ABK66131.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336459440|gb|EGO38382.1| putative transcriptional regulator [Mycobacterium avium subsp.
paratuberculosis S397]
Length=201
Score = 366 bits (940), Expect = 8e-100, Method: Compositional matrix adjust.
Identities = 181/199 (91%), Positives = 190/199 (96%), Gaps = 0/199 (0%)
Query 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETA 63
P EDPED+VAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS+TA
Sbjct 3 PPEDPEDYVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSDTA 62
Query 64 VYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLD 123
VYNVLPQW LAAKPKTMFIGGPVKRDAALCLA LRVGADP+G PGLRHV GR+VMVDLD
Sbjct 63 VYNVLPQWTTLAAKPKTMFIGGPVKRDAALCLATLRVGADPQGAPGLRHVDGRVVMVDLD 122
Query 124 ADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLR 183
ADP+ +A VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPR+DLWGQVLR
Sbjct 123 ADPDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRSDLWGQVLR 182
Query 184 RQPLPLSLLATHPIDLSRN 202
RQPLPLSLLATHPID+SRN
Sbjct 183 RQPLPLSLLATHPIDISRN 201
>gi|296167091|ref|ZP_06849501.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897533|gb|EFG77129.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=201
Score = 366 bits (940), Expect = 9e-100, Method: Compositional matrix adjust.
Identities = 182/199 (92%), Positives = 189/199 (95%), Gaps = 0/199 (0%)
Query 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETA 63
P EDPED+VAPAAQRVRAGTLLLANTDL EPTFRRSVIYIVEHNDGGTLGVVLNR SETA
Sbjct 3 PPEDPEDYVAPAAQRVRAGTLLLANTDLFEPTFRRSVIYIVEHNDGGTLGVVLNRASETA 62
Query 64 VYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLD 123
VYNVLPQW KLAAKPKTMFIGGPVKRDAALCLA LRVGADP+GV GLRHVAGR+VMVDLD
Sbjct 63 VYNVLPQWTKLAAKPKTMFIGGPVKRDAALCLAALRVGADPQGVAGLRHVAGRVVMVDLD 122
Query 124 ADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLR 183
ADP+ +A VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPR+DLW QVLR
Sbjct 123 ADPDTIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRSDLWSQVLR 182
Query 184 RQPLPLSLLATHPIDLSRN 202
RQPLPLSLLATHPIDLSRN
Sbjct 183 RQPLPLSLLATHPIDLSRN 201
>gi|118615966|ref|YP_904298.1| hypothetical protein MUL_0052 [Mycobacterium ulcerans Agy99]
gi|183980088|ref|YP_001848379.1| hypothetical protein MMAR_0053 [Mycobacterium marinum M]
gi|166227784|sp|A0PKF8.1|Y052_MYCUA RecName: Full=UPF0301 protein MUL_0052
gi|226734027|sp|B2HI98.1|Y053_MYCMM RecName: Full=UPF0301 protein MMAR_0053
gi|118568076|gb|ABL02827.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183173414|gb|ACC38524.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=201
Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 183/201 (92%), Positives = 192/201 (96%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+AP EDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE
Sbjct 1 MAPQEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAV+NVLPQWAKLAAKPKTMFIGGPVKRDAALCLA LRVGADP GV GLRHVAGR+VMVD
Sbjct 61 TAVHNVLPQWAKLAAKPKTMFIGGPVKRDAALCLATLRVGADPGGVSGLRHVAGRIVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LDADP+++A VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLV PRADLWG+
Sbjct 121 LDADPDLIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVPPRADLWGRT 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQP PLSLLATHPID+SRN
Sbjct 181 LRRQPWPLSLLATHPIDVSRN 201
>gi|254773097|ref|ZP_05214613.1| hypothetical protein MaviaA2_00226 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=201
Score = 364 bits (934), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 180/199 (91%), Positives = 189/199 (95%), Gaps = 0/199 (0%)
Query 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETA 63
P EDPED+VAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS+TA
Sbjct 3 PPEDPEDYVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSDTA 62
Query 64 VYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLD 123
VYNVLPQW LAAKPKTMFIGGPVKRDAALCLA LRVGADP+G PGLRHV GR+VMVDLD
Sbjct 63 VYNVLPQWTTLAAKPKTMFIGGPVKRDAALCLATLRVGADPQGAPGLRHVDGRVVMVDLD 122
Query 124 ADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLR 183
ADP+ +A VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPR+DLWGQVL
Sbjct 123 ADPDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRSDLWGQVLH 182
Query 184 RQPLPLSLLATHPIDLSRN 202
RQPLPLSLLATHPID+SRN
Sbjct 183 RQPLPLSLLATHPIDISRN 201
>gi|108802351|ref|YP_642548.1| hypothetical protein Mmcs_5392 [Mycobacterium sp. MCS]
gi|119871504|ref|YP_941456.1| hypothetical protein Mkms_5481 [Mycobacterium sp. KMS]
gi|126438331|ref|YP_001074022.1| hypothetical protein Mjls_5768 [Mycobacterium sp. JLS]
gi|108772770|gb|ABG11492.1| protein of unknown function DUF179 [Mycobacterium sp. MCS]
gi|119697593|gb|ABL94666.1| protein of unknown function DUF179 [Mycobacterium sp. KMS]
gi|126238131|gb|ABO01532.1| protein of unknown function DUF179 [Mycobacterium sp. JLS]
Length=204
Score = 360 bits (925), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 179/201 (90%), Positives = 187/201 (94%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
VA EDPED +APAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE
Sbjct 4 VAQSEDPEDFIAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 63
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLA LR G + GVPGLRHV GR+VMVD
Sbjct 64 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLATLRAGVEAAGVPGLRHVQGRMVMVD 123
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LDADPE LA A+EGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVL+ PR DLW +V
Sbjct 124 LDADPEPLAPALEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLIEPRVDLWARV 183
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLPLSLLATHPID+SRN
Sbjct 184 LRRQPLPLSLLATHPIDVSRN 204
>gi|254819075|ref|ZP_05224076.1| hypothetical protein MintA_04068 [Mycobacterium intracellulare
ATCC 13950]
Length=202
Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/202 (89%), Positives = 189/202 (94%), Gaps = 0/202 (0%)
Query 1 VVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS 60
+V P EDPED+VAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNR S
Sbjct 1 MVPPPEDPEDYVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRAS 60
Query 61 ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV 120
ETAV+NVLPQW L+AKPKTMFIGGPVKRDAALCLA LRVGADP VPGLRHV GR+VMV
Sbjct 61 ETAVHNVLPQWTNLSAKPKTMFIGGPVKRDAALCLATLRVGADPHDVPGLRHVDGRVVMV 120
Query 121 DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ 180
DLDADP+ +A VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPR+DLWG
Sbjct 121 DLDADPDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRSDLWGH 180
Query 181 VLRRQPLPLSLLATHPIDLSRN 202
VLRRQPLPLSLLATHPID+SRN
Sbjct 181 VLRRQPLPLSLLATHPIDISRN 202
>gi|15826889|ref|NP_301152.1| hypothetical protein ML0028 [Mycobacterium leprae TN]
gi|221229367|ref|YP_002502783.1| hypothetical protein MLBr_00028 [Mycobacterium leprae Br4923]
gi|13092436|emb|CAC29536.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932474|emb|CAR70121.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=201
Score = 358 bits (918), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/197 (90%), Positives = 190/197 (97%), Gaps = 0/197 (0%)
Query 6 EDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVY 65
EDPED+VAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHN+GGTLGVVLNRPSETAVY
Sbjct 5 EDPEDYVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNEGGTLGVVLNRPSETAVY 64
Query 66 NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDAD 125
NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLR+GADP+GV GLRHVAGRLVMVDLDA+
Sbjct 65 NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRIGADPDGVAGLRHVAGRLVMVDLDAE 124
Query 126 PEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQ 185
P+++A V+G+RI+ GYSGWTIGQL+GEIERDDWIVLSALPSDVLVG RADLW QVLRRQ
Sbjct 125 PDLIAPLVDGLRIFVGYSGWTIGQLKGEIERDDWIVLSALPSDVLVGKRADLWAQVLRRQ 184
Query 186 PLPLSLLATHPIDLSRN 202
PL LSLLATHPID+SRN
Sbjct 185 PLLLSLLATHPIDVSRN 201
>gi|13431996|sp|Q50191.1|Y028_MYCLE RecName: Full=UPF0301 protein ML0028
gi|1262369|emb|CAA94716.1| hypothetical protein [Mycobacterium leprae]
Length=202
Score = 357 bits (917), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 177/197 (90%), Positives = 190/197 (97%), Gaps = 0/197 (0%)
Query 6 EDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVY 65
EDPED+VAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHN+GGTLGVVLNRPSETAVY
Sbjct 6 EDPEDYVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNEGGTLGVVLNRPSETAVY 65
Query 66 NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDAD 125
NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLR+GADP+GV GLRHVAGRLVMVDLDA+
Sbjct 66 NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRIGADPDGVAGLRHVAGRLVMVDLDAE 125
Query 126 PEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQ 185
P+++A V+G+RI+ GYSGWTIGQL+GEIERDDWIVLSALPSDVLVG RADLW QVLRRQ
Sbjct 126 PDLIAPLVDGLRIFVGYSGWTIGQLKGEIERDDWIVLSALPSDVLVGKRADLWAQVLRRQ 185
Query 186 PLPLSLLATHPIDLSRN 202
PL LSLLATHPID+SRN
Sbjct 186 PLLLSLLATHPIDVSRN 202
>gi|120406986|ref|YP_956815.1| hypothetical protein Mvan_6057 [Mycobacterium vanbaalenii PYR-1]
gi|166228789|sp|A1TI09.1|Y6057_MYCVP RecName: Full=UPF0301 protein Mvan_6057
gi|119959804|gb|ABM16809.1| protein of unknown function DUF179 [Mycobacterium vanbaalenii
PYR-1]
Length=201
Score = 353 bits (906), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 175/201 (88%), Positives = 185/201 (93%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+A EDPED VAPAA RVRAGT+LLANTDLLEPTFRRSVIY+VEHNDGGTLGVVLNRPSE
Sbjct 1 MAQPEDPEDFVAPAAYRVRAGTMLLANTDLLEPTFRRSVIYVVEHNDGGTLGVVLNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAVYNVLPQWAKLA KPKTMFIGGPVKRDAALCLA LRVG DP GV GLRHV GR+VMVD
Sbjct 61 TAVYNVLPQWAKLATKPKTMFIGGPVKRDAALCLATLRVGIDPAGVDGLRHVQGRVVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LDADP+ +A VEGVRI+AGYSGWTIGQLEGEIERDDWIVLSALPSDVLV PR DLW ++
Sbjct 121 LDADPDSIAPMVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEPRVDLWARI 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQP+PLSLLATHPIDLSRN
Sbjct 181 LRRQPMPLSLLATHPIDLSRN 201
>gi|145221444|ref|YP_001132122.1| hypothetical protein Mflv_0850 [Mycobacterium gilvum PYR-GCK]
gi|315446804|ref|YP_004079683.1| transcriptional regulator [Mycobacterium sp. Spyr1]
gi|189040618|sp|A4T4R8.1|Y850_MYCGI RecName: Full=UPF0301 protein Mflv_0850
gi|145213930|gb|ABP43334.1| protein of unknown function DUF179 [Mycobacterium gilvum PYR-GCK]
gi|315265107|gb|ADU01849.1| predicted transcriptional regulator [Mycobacterium sp. Spyr1]
Length=204
Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/197 (86%), Positives = 181/197 (92%), Gaps = 0/197 (0%)
Query 6 EDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVY 65
ED +D APAA RVRAGT+LLANTDLLEPTFRRSVIY+VEHNDGGTLGVVLNR SETAVY
Sbjct 8 EDYQDRAAPAAHRVRAGTMLLANTDLLEPTFRRSVIYVVEHNDGGTLGVVLNRASETAVY 67
Query 66 NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDAD 125
NVLPQWAKLA KPKTMFIGGPVKRDAALCL LRVG+DP GVPGLRHV GR+VMVDLDAD
Sbjct 68 NVLPQWAKLAVKPKTMFIGGPVKRDAALCLGTLRVGSDPVGVPGLRHVQGRIVMVDLDAD 127
Query 126 PEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQ 185
P+ LA +EGVRI+AGYSGWTIGQLEGEIERDDWIVLSALP+DVLV P+ DLW ++LRRQ
Sbjct 128 PDELAPILEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPTDVLVEPKVDLWARILRRQ 187
Query 186 PLPLSLLATHPIDLSRN 202
P+PLSLLATHPIDLSRN
Sbjct 188 PMPLSLLATHPIDLSRN 204
>gi|118472576|ref|YP_891116.1| hypothetical protein MSMEG_6921 [Mycobacterium smegmatis str.
MC2 155]
gi|166228833|sp|A0R7H8.1|Y6921_MYCS2 RecName: Full=UPF0301 protein MSMEG_6921
gi|118173863|gb|ABK74759.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=201
Score = 341 bits (875), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 166/201 (83%), Positives = 182/201 (91%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+A EDPED +APAA RVR GTLLLANTDLLEPTFRR+VIYIVEHN GGTLGV+LNRPSE
Sbjct 1 MAQSEDPEDFIAPAAHRVRPGTLLLANTDLLEPTFRRTVIYIVEHNSGGTLGVILNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAVYNVLPQWA++ AKPKTMFIGGPVKRD+ALCLA LRVG +GV GLRHV GR+VMVD
Sbjct 61 TAVYNVLPQWAEVTAKPKTMFIGGPVKRDSALCLATLRVGMQADGVDGLRHVQGRVVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LDADPE LA +EGVRI+AGYSGWT GQL+GEIERDDWIVLSALPSDVL+ PR DLWG+V
Sbjct 121 LDADPEELAPVIEGVRIFAGYSGWTTGQLDGEIERDDWIVLSALPSDVLIEPRIDLWGRV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLP+SLLATHPID+SRN
Sbjct 181 LRRQPLPMSLLATHPIDVSRN 201
>gi|333992966|ref|YP_004525580.1| hypothetical protein JDM601_4326 [Mycobacterium sp. JDM601]
gi|333488934|gb|AEF38326.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=204
Score = 333 bits (855), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 161/197 (82%), Positives = 180/197 (92%), Gaps = 0/197 (0%)
Query 6 EDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVY 65
ED E VAPAA RVRAGTLLLANTDLLEPTFRR+VIY+VEHNDGGTLGVVLNRPSETAVY
Sbjct 8 EDAEQFVAPAAHRVRAGTLLLANTDLLEPTFRRTVIYVVEHNDGGTLGVVLNRPSETAVY 67
Query 66 NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDAD 125
NVLPQW++LAAKPKTMFIGGPVKRDAALC+ +L++GADP VPG+RH+ GRLVMVDLDA+
Sbjct 68 NVLPQWSELAAKPKTMFIGGPVKRDAALCVGLLKIGADPNDVPGVRHIDGRLVMVDLDAE 127
Query 126 PEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQ 185
PE +A VEGVRI+AGY+GWTIGQLEGEIERDDWIVLSALPSDVLV PR D+W + LRRQ
Sbjct 128 PESIAPHVEGVRIFAGYAGWTIGQLEGEIERDDWIVLSALPSDVLVPPRVDVWSRALRRQ 187
Query 186 PLPLSLLATHPIDLSRN 202
P P +LLATHP+D+SRN
Sbjct 188 PWPTALLATHPVDISRN 204
>gi|169632001|ref|YP_001705650.1| hypothetical protein MAB_4928c [Mycobacterium abscessus ATCC
19977]
gi|226707634|sp|B1MML1.1|Y4928_MYCA9 RecName: Full=UPF0301 protein MAB_4928c
gi|169243968|emb|CAM64996.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=208
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/194 (81%), Positives = 173/194 (90%), Gaps = 0/194 (0%)
Query 9 EDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVL 68
E ++AP A R+RAGTLL+ANT+L EPTFRRSVI+IVEHNDGGTLGVVLNRPSETAVYNVL
Sbjct 15 EGYMAPPAHRLRAGTLLIANTNLFEPTFRRSVIFIVEHNDGGTLGVVLNRPSETAVYNVL 74
Query 69 PQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEV 128
PQWAKLA KPKTMF+GGPVKRDAALCLA LR G +GV GLRHVAGR+ MVDLDA+PE
Sbjct 75 PQWAKLAGKPKTMFVGGPVKRDAALCLATLRAGVSIDGVKGLRHVAGRMAMVDLDAEPED 134
Query 129 LAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLP 188
+A VEG+R++AGYSGWTIGQLEGE+ERDDWIVLSALPSDVL DLW +VLRRQPLP
Sbjct 135 IAPLVEGIRVFAGYSGWTIGQLEGEVERDDWIVLSALPSDVLTDASEDLWAKVLRRQPLP 194
Query 189 LSLLATHPIDLSRN 202
LSLLATHPID+SRN
Sbjct 195 LSLLATHPIDVSRN 208
>gi|289441406|ref|ZP_06431150.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289414325|gb|EFD11565.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=168
Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 152/152 (100%), Gaps = 0/152 (0%)
Query 1 VVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS 60
+VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS
Sbjct 1 MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS 60
Query 61 ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV 120
ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV
Sbjct 61 ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV 120
Query 121 DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEG 152
DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEG
Sbjct 121 DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEG 152
>gi|111020619|ref|YP_703591.1| hypothetical protein RHA1_ro03630 [Rhodococcus jostii RHA1]
gi|118574354|sp|Q0SAK3.1|Y3630_RHOSR RecName: Full=UPF0301 protein RHA1_ro03630
gi|110820149|gb|ABG95433.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=201
Score = 287 bits (734), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 137/201 (69%), Positives = 168/201 (84%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+A E+PED A VR G+LL+++TDL+EP FRR+VIY++EHND G+LGVV+NRPSE
Sbjct 1 MAHAEEPEDRTASTEPVVRPGSLLVSSTDLVEPAFRRTVIYVIEHNDAGSLGVVINRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAV++VLPQWA LAA+P +++GGPVKRDAALCLA LR GA +GV GLR V GR+VMVD
Sbjct 61 TAVHDVLPQWAPLAARPSALYVGGPVKRDAALCLATLRTGAQADGVAGLRRVHGRVVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LD+DPEV+A VEGVRI+AGYSGWT GQL+ E++RDDWIV+SAL SDV+ R D+W QV
Sbjct 121 LDSDPEVIAPLVEGVRIFAGYSGWTYGQLDSELQRDDWIVISALASDVVAPARVDVWAQV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLPL+LLATHPID+ RN
Sbjct 181 LRRQPLPLALLATHPIDVERN 201
>gi|226362862|ref|YP_002780642.1| hypothetical protein ROP_34500 [Rhodococcus opacus B4]
gi|254801678|sp|C1B7P4.1|Y3450_RHOOB RecName: Full=UPF0301 protein ROP_34500
gi|226241349|dbj|BAH51697.1| hypothetical protein [Rhodococcus opacus B4]
Length=201
Score = 284 bits (727), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/201 (68%), Positives = 167/201 (84%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+A E+PED A VR G+LL+++TDL+EP FRR+VIY++EHN+ G+LGVV+NRPSE
Sbjct 1 MAHAEEPEDRTASTEPVVRPGSLLVSSTDLVEPAFRRTVIYVIEHNEAGSLGVVINRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAV++VLPQWA L A+P +++GGPVKRDAALCLA LR GA +GV GLR V GR+VMVD
Sbjct 61 TAVHDVLPQWAPLTARPSALYVGGPVKRDAALCLATLRTGAQADGVRGLRRVHGRVVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LD+DPEV+A VEGVRI+AGYSGWT GQL+ E++RDDWIV+SAL SDVL R D+W QV
Sbjct 121 LDSDPEVVAPLVEGVRIFAGYSGWTYGQLDSELQRDDWIVISALASDVLAPARVDVWAQV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLPL+LLATHPID+ RN
Sbjct 181 LRRQPLPLALLATHPIDVERN 201
>gi|229491232|ref|ZP_04385060.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321970|gb|EEN87763.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=201
Score = 274 bits (701), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/201 (64%), Positives = 167/201 (84%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+A E+PED +A VR G+LL+++TDL EP FRR+VIY++EHND G+LGVV+NRPSE
Sbjct 1 MAHAEEPEDRMAWIEPEVRPGSLLVSSTDLTEPAFRRTVIYMIEHNDAGSLGVVVNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAV NVLPQW+ L A P ++IGGPVKRD+ALCL + R GA +GV GLR V G++VMVD
Sbjct 61 TAVQNVLPQWSPLTAHPSALYIGGPVKRDSALCLGIARNGARIDGVAGLRRVDGKVVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LD+DPEV+A VEG+RI+AGYSGWT+GQL+ E+ER+DW+V+S+LPSDVL PR D+W +V
Sbjct 121 LDSDPEVIAPLVEGIRIFAGYSGWTLGQLDSELEREDWMVISSLPSDVLTPPRVDVWARV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLP+++LA+HPI++ RN
Sbjct 181 LRRQPLPVAMLASHPIEVERN 201
>gi|226309489|ref|YP_002769451.1| hypothetical protein RER_60040 [Rhodococcus erythropolis PR4]
gi|259647092|sp|C0ZVL8.1|Y6004_RHOE4 RecName: Full=UPF0301 protein RER_60040
gi|226188608|dbj|BAH36712.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=201
Score = 274 bits (700), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/201 (64%), Positives = 167/201 (84%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+A E+PED +A VR G+LL+++TDL EP FRR+VIY++EHND G+LGV++NRPSE
Sbjct 1 MAHAEEPEDRMAWIEPEVRPGSLLVSSTDLTEPAFRRTVIYMIEHNDAGSLGVIVNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
TAV NVLPQW+ L A P ++IGGPVKRD+ALCL + R GA +GV GLR V G++VMVD
Sbjct 61 TAVQNVLPQWSPLTAHPSALYIGGPVKRDSALCLGIARNGARIDGVAGLRRVDGKVVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LD+DPEV+A VEG+RI+AGYSGWT+GQL+ E+ER+DW+V+S+LPSDVL PR D+W +V
Sbjct 121 LDSDPEVIAPLVEGIRIFAGYSGWTLGQLDSELEREDWMVISSLPSDVLTPPRVDVWARV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQPLP+++LA+HPI++ RN
Sbjct 181 LRRQPLPVAMLASHPIEVERN 201
>gi|333922217|ref|YP_004495798.1| hypothetical protein AS9A_4566 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484438|gb|AEF42998.1| hypothetical protein AS9A_4566 [Amycolicicoccus subflavus DQS3-9A1]
Length=201
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/197 (65%), Positives = 164/197 (84%), Gaps = 0/197 (0%)
Query 6 EDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVY 65
EDPED+ A + V+ G+LLLA+TDLLEPTFRR+VIY++EHN+ G+LGVVLNR SETAV+
Sbjct 5 EDPEDYRARLDRTVKPGSLLLASTDLLEPTFRRTVIYVIEHNESGSLGVVLNRASETAVH 64
Query 66 NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDAD 125
NVLPQW L+A+PK +FIGGPVKRD+A+CL VLR G +G+ G+R V GR+VM+DLDAD
Sbjct 65 NVLPQWTSLSARPKALFIGGPVKRDSAICLGVLRAGTHIDGLEGIRAVEGRVVMIDLDAD 124
Query 126 PEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQ 185
PE +A + G+RI+ GY+GWT GQL+ E+ RDDW+V+ +LP+DVL RADLWG+VLRRQ
Sbjct 125 PEDMAPVLTGLRIFVGYAGWTTGQLDSELARDDWMVMPSLPADVLAPARADLWGRVLRRQ 184
Query 186 PLPLSLLATHPIDLSRN 202
+PL++LATHPI+L RN
Sbjct 185 SVPLAMLATHPIELDRN 201
>gi|325677345|ref|ZP_08157010.1| hypothetical protein HMPREF0724_14793 [Rhodococcus equi ATCC
33707]
gi|325551808|gb|EGD21505.1| hypothetical protein HMPREF0724_14793 [Rhodococcus equi ATCC
33707]
Length=201
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/201 (68%), Positives = 167/201 (84%), Gaps = 0/201 (0%)
Query 2 VAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSE 61
+A ++PED A A VR GTLLL++T+L EPTFRR+V+Y++EHND G+LGVVLNRPSE
Sbjct 1 MAHSDEPEDRTASAQPVVRPGTLLLSSTELFEPTFRRTVVYMLEHNDAGSLGVVLNRPSE 60
Query 62 TAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVD 121
T+V VLPQWA LAA P+ ++IGGPV RDAALCLA +R G D GVPGLR + GR+VMVD
Sbjct 61 TSVQEVLPQWAPLAAAPQALYIGGPVTRDAALCLATVRAGVDVSGVPGLRRIDGRVVMVD 120
Query 122 LDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQV 181
LDADPE +AA ++G+R++AGY+GWTIGQL+ EI+ DDWIVLSAL SDV+ PR D+WGQV
Sbjct 121 LDADPEPIAAVIDGLRVFAGYAGWTIGQLDAEIDNDDWIVLSALASDVISPPRVDVWGQV 180
Query 182 LRRQPLPLSLLATHPIDLSRN 202
LRRQP+PL+LLATHPID+ N
Sbjct 181 LRRQPMPLALLATHPIDVDLN 201
>gi|54027485|ref|YP_121727.1| hypothetical protein nfa55110 [Nocardia farcinica IFM 10152]
gi|81372872|sp|Q5YN78.1|Y5511_NOCFA RecName: Full=UPF0301 protein NFA_55110
gi|54018993|dbj|BAD60363.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=214
Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/186 (69%), Positives = 156/186 (84%), Gaps = 0/186 (0%)
Query 17 QRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAA 76
Q VRAGTLLLA TDL EPTFRRSV+YI+EHND G+LGVV+NRPSET++ +VLP+W+ LAA
Sbjct 29 QVVRAGTLLLAATDLTEPTFRRSVVYIMEHNDSGSLGVVINRPSETSLADVLPRWSALAA 88
Query 77 KPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGV 136
P T++ GGPVKRDAALCL L+VGA GVPGLR + GR+V+VDL ADPE +A VEG+
Sbjct 89 DPGTLYFGGPVKRDAALCLGTLKVGASTAGVPGLRRIDGRVVLVDLAADPERIAPLVEGI 148
Query 137 RIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHP 196
R++AGY+GWT GQLEGE++ +DWIVLSALP+D + R DLW VLRRQPLP+SLLATHP
Sbjct 149 RVFAGYAGWTFGQLEGELDNEDWIVLSALPTDPISAARPDLWADVLRRQPLPMSLLATHP 208
Query 197 IDLSRN 202
I++ RN
Sbjct 209 IEVERN 214
>gi|312141994|ref|YP_004009330.1| hypothetical protein REQ_47120 [Rhodococcus equi 103S]
gi|311891333|emb|CBH50654.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=185
Score = 260 bits (665), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/184 (70%), Positives = 157/184 (86%), Gaps = 0/184 (0%)
Query 19 VRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKP 78
VR GTLLL++T+L EPTFRR+V+Y++EHND G+LGVVLNRPSET+V VLPQWA LAA P
Sbjct 2 VRPGTLLLSSTELFEPTFRRTVVYMLEHNDAGSLGVVLNRPSETSVQEVLPQWAPLAAAP 61
Query 79 KTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRI 138
+ ++IGGPV RDAALCLA +R G D GVPGLR + GR+VMVDLDADPE +AA ++G+R+
Sbjct 62 QALYIGGPVTRDAALCLATVRAGVDVSGVPGLRRIDGRVVMVDLDADPEPIAAVIDGLRV 121
Query 139 YAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPID 198
+AGY+GWTI QL+ EI+ DDWIVLSAL SDV+ PR D+WGQVLRRQP+PL+LLATHPID
Sbjct 122 FAGYAGWTIAQLDAEIDNDDWIVLSALASDVISPPRVDVWGQVLRRQPMPLALLATHPID 181
Query 199 LSRN 202
+ N
Sbjct 182 VDLN 185
>gi|262204631|ref|YP_003275839.1| hypothetical protein Gbro_4833 [Gordonia bronchialis DSM 43247]
gi|262087978|gb|ACY23946.1| protein of unknown function DUF179 [Gordonia bronchialis DSM
43247]
Length=225
Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/188 (65%), Positives = 152/188 (81%), Gaps = 0/188 (0%)
Query 15 AAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKL 74
+A RVR GT+LLA+TDL+EPTF RSV+YI+EHND G+LGVV+NR S+TAV+N+LPQW L
Sbjct 38 SAHRVRPGTVLLASTDLIEPTFARSVVYIIEHNDAGSLGVVINRMSQTAVHNLLPQWTDL 97
Query 75 AAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVE 134
AA P+ +++GGPVK+DAALCL + R GAD G P LR V GR+V+VDLDADP+ L +E
Sbjct 98 AASPRALYVGGPVKQDAALCLGIARPGADITGFPALRPVDGRVVLVDLDADPDDLTDVLE 157
Query 135 GVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLAT 194
GVRI+AGY+GW IGQL+GE+ERD W++ SALP DVL P D+W +LRRQP P LLAT
Sbjct 158 GVRIFAGYAGWGIGQLDGELERDSWLLASALPRDVLAPPAVDVWSDILRRQPWPTPLLAT 217
Query 195 HPIDLSRN 202
HPID++ N
Sbjct 218 HPIDVTVN 225
>gi|296141883|ref|YP_003649126.1| hypothetical protein Tpau_4219 [Tsukamurella paurometabola DSM
20162]
gi|296030017|gb|ADG80787.1| protein of unknown function DUF179 [Tsukamurella paurometabola
DSM 20162]
Length=209
Score = 247 bits (630), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 117/200 (59%), Positives = 156/200 (78%), Gaps = 0/200 (0%)
Query 3 APHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSET 62
AP + A + V AGTLL+++ +L EPTFRR+V+Y++EHN+ G+LGVVLNRPSE+
Sbjct 10 APRDASSGENAGSGFEVSAGTLLVSSPELYEPTFRRTVVYLIEHNESGSLGVVLNRPSES 69
Query 63 AVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDL 122
AV+ VLPQW +LAAKPK +F+GGPV + AALCL V++ G D G+ GL+ VAGR+V+VDL
Sbjct 70 AVHGVLPQWHELAAKPKAVFVGGPVNQSAALCLGVVKAGQDVNGIRGLQPVAGRVVLVDL 129
Query 123 DADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVL 182
D+D E++ ++GVR++AGYSGW +GQL+ E+ERDDWI +L +DVL PR DLWG+VL
Sbjct 130 DSDVEMMDELLDGVRVFAGYSGWGMGQLDDELERDDWIPCGSLHTDVLAPPRVDLWGKVL 189
Query 183 RRQPLPLSLLATHPIDLSRN 202
RRQ P SLLATHP+D+S N
Sbjct 190 RRQGFPTSLLATHPVDVSVN 209
>gi|343928703|ref|ZP_08768148.1| hypothetical protein GOALK_120_01310 [Gordonia alkanivorans NBRC
16433]
gi|343761452|dbj|GAA15074.1| hypothetical protein GOALK_120_01310 [Gordonia alkanivorans NBRC
16433]
Length=225
Score = 240 bits (612), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/190 (62%), Positives = 150/190 (79%), Gaps = 0/190 (0%)
Query 13 APAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWA 72
A RVR GT L+A+TDL+EPTF R+VIY++EHN+ G+LGVVLNR S+TAV+N+LPQW
Sbjct 36 ADPTHRVRPGTALIASTDLIEPTFARTVIYVIEHNEAGSLGVVLNRMSQTAVHNLLPQWT 95
Query 73 KLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAA 132
+AA P+ ++IGGPVK+DAALCL V++ G D + P LR V GR+V+VDLDADPE L+
Sbjct 96 DIAASPRALYIGGPVKQDAALCLGVMKHGYDVDDHPALRPVDGRVVLVDLDADPEPLSEV 155
Query 133 VEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLL 192
+EGVRI+AGYSGW IGQL+ E+++ W++ SALP D+L P D+W +LRRQP P+ LL
Sbjct 156 LEGVRIFAGYSGWGIGQLDDELDQFSWMLASALPRDLLAPPGVDVWFDMLRRQPWPMPLL 215
Query 193 ATHPIDLSRN 202
ATHPIDLS N
Sbjct 216 ATHPIDLSLN 225
>gi|300791132|ref|YP_003771423.1| transcriptional regulator [Amycolatopsis mediterranei U32]
gi|299800646|gb|ADJ51021.1| putative transcriptional regulator [Amycolatopsis mediterranei
U32]
Length=190
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/189 (57%), Positives = 139/189 (74%), Gaps = 0/189 (0%)
Query 14 PAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAK 73
PA V GTLL+A +++P FRR+V+++++H + GTLGVVLNRPS+ AV++VLP W
Sbjct 2 PADAEVEPGTLLVAAPTMVDPNFRRTVVFVIDHREEGTLGVVLNRPSDVAVHDVLPNWGG 61
Query 74 LAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAV 133
A+P+ +F+GGPV++ ALCLA LR G VPG+ V G + +VDLD DPE L V
Sbjct 62 HVAEPQAVFVGGPVEKKTALCLAALRTGETAASVPGVIAVRGPVALVDLDTDPEALVPKV 121
Query 134 EGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLA 193
GVR++AGY+GW GQL GEIER+DW+++ ALPSD+L P DLW QVLRRQ +PL+LLA
Sbjct 122 RGVRVFAGYAGWNSGQLAGEIEREDWVIVPALPSDILASPDGDLWSQVLRRQGIPLALLA 181
Query 194 THPIDLSRN 202
THP DL RN
Sbjct 182 THPGDLQRN 190
>gi|302531328|ref|ZP_07283670.1| UPF0301 protein [Streptomyces sp. AA4]
gi|302440223|gb|EFL12039.1| UPF0301 protein [Streptomyces sp. AA4]
Length=193
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/189 (57%), Positives = 138/189 (74%), Gaps = 0/189 (0%)
Query 14 PAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAK 73
PA V GTLL+A + +P F+R+V+++++H GTLGVVLNRPS+ V +VLP W
Sbjct 5 PADAEVEPGTLLVAAPTMFDPNFKRTVVFVIDHRAEGTLGVVLNRPSDVPVNDVLPGWGA 64
Query 74 LAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAV 133
A+P+++F+GGPV + ALCLA LR G VPG+ V G + +VDLD+DPEVL V
Sbjct 65 HVAEPQSVFVGGPVDKKTALCLAALRTGETASSVPGVVAVRGPVALVDLDSDPEVLVPKV 124
Query 134 EGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLA 193
GVR++AGY+GW GQL GEIER+DW+++ ALPSD+L P DLWGQVLRRQ +PL+LLA
Sbjct 125 RGVRVFAGYAGWDSGQLAGEIEREDWVIVPALPSDILAPPSRDLWGQVLRRQGVPLALLA 184
Query 194 THPIDLSRN 202
THP DL RN
Sbjct 185 THPGDLQRN 193
>gi|257057894|ref|YP_003135726.1| hypothetical protein Svir_39570 [Saccharomonospora viridis DSM
43017]
gi|256587766|gb|ACU98899.1| predicted transcriptional regulator [Saccharomonospora viridis
DSM 43017]
Length=198
Score = 220 bits (561), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/188 (57%), Positives = 139/188 (74%), Gaps = 0/188 (0%)
Query 15 AAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKL 74
A +V GTLL+A + +P FRR+V+++++H GTLGVVLNRPSE AV VLP+W
Sbjct 11 ADAQVEPGTLLVAAPTMFDPNFRRTVVFVIDHRAEGTLGVVLNRPSEVAVREVLPRWGDH 70
Query 75 AAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVE 134
A+P+++F+GGPV++ ALCLA LR G VPG+ V G + +VDLD+DPE+LA+ V
Sbjct 71 VAEPRSVFVGGPVEKKTALCLAALRTGETAATVPGVIGVRGPVALVDLDSDPEMLASKVR 130
Query 135 GVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLAT 194
G+R++AGY+GW GQL EIER DW+++ ALPSDV+ GP DLWG VLRRQ LP +LLAT
Sbjct 131 GLRVFAGYAGWDGGQLASEIERGDWLIVPALPSDVMAGPTRDLWGHVLRRQGLPTALLAT 190
Query 195 HPIDLSRN 202
HP DL RN
Sbjct 191 HPGDLQRN 198
>gi|340532831|gb|AEK48036.1| hypothetical protein RAM_47855 [Amycolatopsis mediterranei S699]
Length=172
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/172 (57%), Positives = 130/172 (76%), Gaps = 0/172 (0%)
Query 31 LLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTMFIGGPVKRD 90
+++P FRR+V+++++H + GTLGVVLNRPS+ AV++VLP W A+P+ +F+GGPV++
Sbjct 1 MVDPNFRRTVVFVIDHREEGTLGVVLNRPSDVAVHDVLPNWGGHVAEPQAVFVGGPVEKK 60
Query 91 AALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQL 150
ALCLA LR G VPG+ V G + +VDLD DPE L V GVR++AGY+GW GQL
Sbjct 61 TALCLAALRTGETAASVPGVIAVRGPVALVDLDTDPEALVPKVRGVRVFAGYAGWNSGQL 120
Query 151 EGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN 202
GEIER+DW+++ ALPSD+L P DLW QVLRRQ +PL+LLATHP DL RN
Sbjct 121 AGEIEREDWVIVPALPSDILASPDGDLWSQVLRRQGIPLALLATHPGDLQRN 172
>gi|331700372|ref|YP_004336611.1| hypothetical protein Psed_6670 [Pseudonocardia dioxanivorans
CB1190]
gi|326955061|gb|AEA28758.1| UPF0301 protein yqgE [Pseudonocardia dioxanivorans CB1190]
Length=201
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/184 (55%), Positives = 132/184 (72%), Gaps = 0/184 (0%)
Query 19 VRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKP 78
V GTLL+A+ L +P FRR+V+++VEH D G+LGVVLNRPSE V +VLP W L+++P
Sbjct 18 VAPGTLLVASPALSDPNFRRTVVFVVEHRDDGSLGVVLNRPSEADVRDVLPAWEALSSQP 77
Query 79 KTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRI 138
+++F+GGPV ALCLA LR G G+ G+ V + +VDLD+DP LA + G+R+
Sbjct 78 RSVFVGGPVDARTALCLAALRTGVATSGLDGVVAVRAPVALVDLDSDPAALAPKLRGLRV 137
Query 139 YAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPID 198
+AGYSGW GQL GEIER DWIV+ ALP DV+ ADLWG+VLRRQ PL+LLAT P +
Sbjct 138 FAGYSGWGPGQLAGEIERGDWIVVPALPDDVITERHADLWGRVLRRQGTPLALLATFPAE 197
Query 199 LSRN 202
+ N
Sbjct 198 VGLN 201
>gi|256381053|ref|YP_003104713.1| hypothetical protein Amir_7076 [Actinosynnema mirum DSM 43827]
gi|255925356|gb|ACU40867.1| protein of unknown function DUF179 [Actinosynnema mirum DSM 43827]
Length=193
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/188 (54%), Positives = 135/188 (72%), Gaps = 0/188 (0%)
Query 15 AAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKL 74
A V G+LL+A L + FRR+V+Y+++H G+LGVVLNRPSE AV++VLP W
Sbjct 6 ADAEVEPGSLLVAAPTLNDSNFRRTVVYVIDHRGEGSLGVVLNRPSEVAVHDVLPAWGPH 65
Query 75 AAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVE 134
++P+ +FIGGPV++ ALCLA LR G D + G+ V G + +VDLD++PE L V
Sbjct 66 VSRPQAVFIGGPVEQKTALCLAALRPGEDHRSLDGVVGVHGPVALVDLDSEPESLLPRVR 125
Query 135 GVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLAT 194
G+R++AGY+GW GQLEGE+ER+DWIV+ LP DVL P DLWG+VLRRQ +P +LLAT
Sbjct 126 GLRVFAGYAGWGEGQLEGEVEREDWIVVPGLPDDVLSPPGVDLWGRVLRRQGMPTALLAT 185
Query 195 HPIDLSRN 202
+P D+ RN
Sbjct 186 YPEDVRRN 193
>gi|326383885|ref|ZP_08205569.1| hypothetical protein SCNU_13168 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197344|gb|EGD54534.1| hypothetical protein SCNU_13168 [Gordonia neofelifaecis NRRL
B-59395]
Length=196
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/179 (56%), Positives = 126/179 (71%), Gaps = 0/179 (0%)
Query 18 RVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAK 77
V AG+LL+A+T L PTF R+VIY++EH+ GTLGVVLNR S+ AVYNVLP W +LAA
Sbjct 12 EVSAGSLLIASTALTGPTFARTVIYVIEHDPQGTLGVVLNRMSDAAVYNVLPAWTELAAS 71
Query 78 PKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVR 137
P+ +F+GGPV +ALCL V + G D P L V G + MVDLDADP+ LA + GVR
Sbjct 72 PRAVFVGGPVATSSALCLGVAKTGVDVAKQPQLHQVLGPVAMVDLDADPDELAQVLTGVR 131
Query 138 IYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHP 196
I+AGY+GW GQL+ E+ WIV LP+D+L P D+W +VL RQP PL LL+T+P
Sbjct 132 IFAGYAGWDAGQLDEELAEGSWIVAQGLPTDLLSEPAVDVWQRVLARQPWPLPLLSTYP 190
>gi|134103796|ref|YP_001109457.1| hypothetical protein SACE_7376 [Saccharopolyspora erythraea NRRL
2338]
gi|291005746|ref|ZP_06563719.1| hypothetical protein SeryN2_14594 [Saccharopolyspora erythraea
NRRL 2338]
gi|133916419|emb|CAM06532.1| putative transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
Length=190
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/184 (53%), Positives = 128/184 (70%), Gaps = 0/184 (0%)
Query 19 VRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKP 78
V GTLL+A LL+ FRR+V++I+ H GTLGVVLNRPSE +V +VLP+W A++P
Sbjct 7 VEPGTLLVAAPQLLDQNFRRTVVFIIHHRAEGTLGVVLNRPSEVSVDDVLPRWGPHASEP 66
Query 79 KTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRI 138
+++F+GGPV++ A+CLA LR G D V G+ V G + +VDLD DP L G+R
Sbjct 67 QSLFVGGPVEQRTAICLAALRTGVDVGSVSGMIGVRGPIGLVDLDGDPADLVPRARGLRF 126
Query 139 YAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPID 198
+AGY+GW QL GEI+R DW+V+ ALP DV+ P +LWG+VLRRQ PL+ LATHP D
Sbjct 127 FAGYAGWDADQLAGEIDRGDWLVVPALPDDVIAPPGPELWGRVLRRQGPPLAFLATHPGD 186
Query 199 LSRN 202
+ N
Sbjct 187 VKLN 190
>gi|258655491|ref|YP_003204647.1| hypothetical protein Namu_5395 [Nakamurella multipartita DSM
44233]
gi|258558716|gb|ACV81658.1| protein of unknown function DUF179 [Nakamurella multipartita
DSM 44233]
Length=190
Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/186 (55%), Positives = 128/186 (69%), Gaps = 0/186 (0%)
Query 17 QRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAA 76
+ +RAG LL+A L +P FRR+V+Y+V H+ GT+GV+LNRPSETAV NVLP WA A
Sbjct 5 ESLRAGMLLVATPGLRDPHFRRTVVYLVAHSVDGTVGVILNRPSETAVQNVLPGWASHTA 64
Query 77 KPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGV 136
+P +F GGPV+ AA+CL V R+G +P V G+ V G +V+VDLD DP + ++ G+
Sbjct 65 RPHAVFAGGPVQTSAAMCLGVCRIGTNPREVQGVVGVTGPVVLVDLDGDPATVTQSLRGI 124
Query 137 RIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHP 196
RIYAG +GW QL EI W V+ LP DVL GPR DLW VLRRQP P SL+A HP
Sbjct 125 RIYAGRAGWDAEQLVDEIIEGSWYVVPGLPDDVLAGPRTDLWFSVLRRQPYPQSLMAYHP 184
Query 197 IDLSRN 202
DL+RN
Sbjct 185 GDLTRN 190
>gi|324998735|ref|ZP_08119847.1| hypothetical protein PseP1_08219 [Pseudonocardia sp. P1]
Length=198
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/184 (53%), Positives = 124/184 (68%), Gaps = 0/184 (0%)
Query 19 VRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKP 78
V G+LL+A L +P F RSV+Y++EH G+LGVVLNRP AV +VLP+WA + + P
Sbjct 15 VTPGSLLVAAPGLGDPNFARSVVYMIEHRPHGSLGVVLNRPGPAAVRDVLPRWAGVTSDP 74
Query 79 KTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRI 138
+MF+GGPV+ ALCLA LR G G+ GL V + +VDLD+DP LA + G+RI
Sbjct 75 GSMFVGGPVEAQTALCLAALRTGESGRGLSGLMPVRPPVQLVDLDSDPARLAPRLRGLRI 134
Query 139 YAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPID 198
+AGYSGW GQL GEI R DW V+ LP D+L LW +VLRRQ +PL+LLAT P+D
Sbjct 135 FAGYSGWDAGQLGGEIARGDWFVVPGLPDDLLTVAHDRLWERVLRRQGIPLALLATFPLD 194
Query 199 LSRN 202
+ N
Sbjct 195 PAHN 198
>gi|319951179|ref|ZP_08025022.1| hypothetical protein ES5_16099 [Dietzia cinnamea P4]
gi|319435156|gb|EFV90433.1| hypothetical protein ES5_16099 [Dietzia cinnamea P4]
Length=210
Score = 184 bits (466), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/182 (49%), Positives = 124/182 (69%), Gaps = 0/182 (0%)
Query 21 AGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT 80
AG+LL+A D+ +P FRR++IY++EH+ G+LGVV+ R SET V +LP W++L A P
Sbjct 29 AGSLLIAAPDMPDPNFRRAIIYMIEHDHSGSLGVVITRRSETDVEEILPAWSELCAPPSV 88
Query 81 MFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYA 140
IGGPVK D + L VL G D GL+ + GR+ +VDLD+DP++L ++G+R++
Sbjct 89 FHIGGPVKPDTGIALVVLSAGVDGHRFSGLQQIEGRVHVVDLDSDPDLLREHIDGMRVFV 148
Query 141 GYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLS 200
GY+GW GQL+ E++R DW V +LPSD+L R D+WG VLRRQ +PL L AT+ D
Sbjct 149 GYTGWAPGQLQDELDRGDWYVAPSLPSDLLAPARVDVWGAVLRRQEMPLPLYATYLQDGD 208
Query 201 RN 202
N
Sbjct 209 LN 210
>gi|213966270|ref|ZP_03394454.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213951122|gb|EEB62520.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length=213
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 93/189 (50%), Positives = 125/189 (67%), Gaps = 7/189 (3%)
Query 21 AGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT 80
AG LLLA +L P F RSVI+++EH++ GTLGV L + S+T V+NVL WA L AKP
Sbjct 25 AGMLLLAAPGILSPEFARSVIFLIEHDEHGTLGVDLTQRSQTPVHNVLEPWAPLMAKPPV 84
Query 81 MFIGGPVKRDAALCLAVLRVGAD-PE------GVPGLRHVAGRLVMVDLDADPEVLAAAV 133
+++GGPV + +C+ V+R GA PE G P + +A R +V+L A+PE + +
Sbjct 85 LYVGGPVNQTQPICIGVVRNGATLPEETDSITGAPLMERIAHRFALVNLGAEPEDVRDRI 144
Query 134 EGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLA 193
+G RI+AGY+GW GQLE E+ER DW V ALPSDVL AD+WG +RRQP PL L
Sbjct 145 DGARIFAGYAGWDPGQLEDELERGDWYVAPALPSDVLAPAAADIWGDCMRRQPWPLPLYG 204
Query 194 THPIDLSRN 202
T+P+D+ N
Sbjct 205 TYPVDVRDN 213
>gi|296392446|ref|YP_003657330.1| hypothetical protein Srot_0006 [Segniliparus rotundus DSM 44985]
gi|296179593|gb|ADG96499.1| protein of unknown function DUF179 [Segniliparus rotundus DSM
44985]
Length=200
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/191 (49%), Positives = 127/191 (67%), Gaps = 5/191 (2%)
Query 17 QRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAA 76
+ VRAG+LLLA+TDL TF+R+V+YI+EH++ GT G+V+NRP++ +V +V P W AA
Sbjct 10 ESVRAGSLLLASTDLRGDTFQRTVVYILEHDERGTFGLVVNRPTKISVASVAPAWEDFAA 69
Query 77 KPKTMFIGGPVKRDAALCLAVLR--VGADPEGVP---GLRHVAGRLVMVDLDADPEVLAA 131
+P + GGPV++D LCL + R V A G G VA + +VDL+ D +++A+
Sbjct 70 EPCVVHNGGPVRKDGLLCLGLPREGVAAAESGSTESLGFSVVAPDIAVVDLEGDAQLIAS 129
Query 132 AVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSL 191
+++ VRI+AGYSGW GQL E+ R W V+S LP DV VG DLWGQV+RR +
Sbjct 130 SLQYVRIFAGYSGWASGQLAAELSRGAWYVVSGLPQDVFVGAGVDLWGQVIRRHGARAGV 189
Query 192 LATHPIDLSRN 202
LATHPID N
Sbjct 190 LATHPIDTGVN 200
>gi|25029483|ref|NP_739537.1| hypothetical protein CE2927 [Corynebacterium efficiens YS-314]
gi|23494772|dbj|BAC19737.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=217
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/186 (49%), Positives = 117/186 (63%), Gaps = 0/186 (0%)
Query 17 QRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAA 76
V G+LL+A DL P F RSVI ++EH+ T GV L S+ AV NVLP+W +L A
Sbjct 32 NEVAPGSLLVAAPDLASPEFSRSVILVIEHSHATTFGVNLASRSDLAVANVLPEWTELTA 91
Query 77 KPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGV 136
KP+ ++IGGP+ + A + L V + G D E +A RLV VDL P+ + +EG+
Sbjct 92 KPQALYIGGPLSQQAVVGLGVTKPGVDIESSTKFNKLANRLVHVDLRVTPDEVRDDLEGM 151
Query 137 RIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHP 196
R +AGY+ W GQL EIE+ DW V ALPSDVL R D+WG V+RRQP+PL L +THP
Sbjct 152 RFFAGYAEWAPGQLNDEIEQGDWYVAPALPSDVLAPGRVDVWGDVMRRQPMPLPLYSTHP 211
Query 197 IDLSRN 202
D S N
Sbjct 212 SDPSDN 217
>gi|259508337|ref|ZP_05751237.1| transcriptional regulator [Corynebacterium efficiens YS-314]
gi|46577489|sp|Q8FSW7.2|Y2927_COREF RecName: Full=UPF0301 protein CE2927
gi|259164071|gb|EEW48625.1| transcriptional regulator [Corynebacterium efficiens YS-314]
Length=201
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/186 (49%), Positives = 117/186 (63%), Gaps = 0/186 (0%)
Query 17 QRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAA 76
V G+LL+A DL P F RSVI ++EH+ T GV L S+ AV NVLP+W +L A
Sbjct 16 NEVAPGSLLVAAPDLASPEFSRSVILVIEHSHATTFGVNLASRSDLAVANVLPEWTELTA 75
Query 77 KPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGV 136
KP+ ++IGGP+ + A + L V + G D E +A RLV VDL P+ + +EG+
Sbjct 76 KPQALYIGGPLSQQAVVGLGVTKPGVDIESSTKFNKLANRLVHVDLRVTPDEVRDDLEGM 135
Query 137 RIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHP 196
R +AGY+ W GQL EIE+ DW V ALPSDVL R D+WG V+RRQP+PL L +THP
Sbjct 136 RFFAGYAEWAPGQLNDEIEQGDWYVAPALPSDVLAPGRVDVWGDVMRRQPMPLPLYSTHP 195
Query 197 IDLSRN 202
D S N
Sbjct 196 SDPSDN 201
>gi|296118580|ref|ZP_06837158.1| putative transcriptional regulator [Corynebacterium ammoniagenes
DSM 20306]
gi|295968479|gb|EFG81726.1| putative transcriptional regulator [Corynebacterium ammoniagenes
DSM 20306]
Length=198
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/181 (49%), Positives = 116/181 (65%), Gaps = 0/181 (0%)
Query 22 GTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTM 81
G LL++ + P F R+V+ ++EH D + GVVL SE AV+NVLP W + AKP+ +
Sbjct 18 GQLLVSAPGTMSPHFNRTVVLVIEHTDAMSFGVVLTARSEVAVFNVLPDWLPVIAKPQAL 77
Query 82 FIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAG 141
+IGGP+ + + + LA+ + G + + P L +A RL VD+ DPE LA V+GVR++AG
Sbjct 78 YIGGPLNQQSVVGLAMTKTGVNIDAHPQLNRLAPRLAHVDMRTDPEDLANYVDGVRLFAG 137
Query 142 YSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSR 201
Y+ W GQL EIER DW V ALP DV+ ADLWG VLRRQ +PL L AT P DL
Sbjct 138 YAEWGPGQLNDEIERGDWFVTPALPQDVITPGPADLWGDVLRRQDMPLPLYATFPEDLEA 197
Query 202 N 202
N
Sbjct 198 N 198
>gi|227506206|ref|ZP_03936255.1| protein of hypothetical function DUF179 [Corynebacterium striatum
ATCC 6940]
gi|227197230|gb|EEI77278.1| protein of hypothetical function DUF179 [Corynebacterium striatum
ATCC 6940]
Length=198
Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/181 (49%), Positives = 117/181 (65%), Gaps = 0/181 (0%)
Query 22 GTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTM 81
G LL+A L P F RSVI ++EHND T GV L + SE AV+NVLP+W + AKP+ +
Sbjct 18 GQLLVAAPGTLSPEFARSVILVIEHNDMMTFGVDLTKRSEVAVFNVLPEWLPVVAKPQAL 77
Query 82 FIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAG 141
+IGGP+ + + + L + + G E P L +A RLV VDL ++PE +A V G R++AG
Sbjct 78 YIGGPLNQQSVVALGMTKQGVRIEEHPQLNKLAPRLVHVDLRSEPEDIAELVTGARLFAG 137
Query 142 YSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSR 201
Y+ W GQL EIER DW V AL DVL ADLWG V++RQP+PL L +T+P ++
Sbjct 138 YAEWGPGQLAEEIERGDWYVAPALAQDVLTPGAADLWGDVMKRQPMPLPLYSTYPANIDD 197
Query 202 N 202
N
Sbjct 198 N 198
>gi|302331755|gb|ADL21949.1| Hypothetical protein Cp1002_2094 [Corynebacterium pseudotuberculosis
1002]
Length=201
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/181 (46%), Positives = 116/181 (65%), Gaps = 0/181 (0%)
Query 22 GTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTM 81
G LL+A + +P F RSVI ++EHN+ T GV L S+ AV+NV+P+WA L +KP+ +
Sbjct 21 GMLLIAAPSMEDPVFARSVILLLEHNEATTFGVNLASRSDVAVFNVMPEWAPLVSKPQAL 80
Query 82 FIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAG 141
+IGGP+ + + + V G D P +A RLV VDL PE +AA + G+R++AG
Sbjct 81 YIGGPLNQQGVIGIGVSAPGVDIVSHPHFNRLANRLVHVDLRTQPEDVAADLSGLRLFAG 140
Query 142 YSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSR 201
Y+ W GQL EIE+ +W V AL SDV D+WG V+RRQP+PL L +T+P+D+S
Sbjct 141 YAEWEPGQLNEEIEKGEWYVAPALSSDVTAAGNVDVWGDVMRRQPMPLPLYSTYPMDVSE 200
Query 202 N 202
N
Sbjct 201 N 201
>gi|300859511|ref|YP_003784494.1| hypothetical protein cpfrc_02094 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686965|gb|ADK29887.1| hypothetical protein cpfrc_02094 [Corynebacterium pseudotuberculosis
FRC41]
gi|302207194|gb|ADL11536.1| Hypothetical protein CpC231_2087 [Corynebacterium pseudotuberculosis
C231]
gi|308277447|gb|ADO27346.1| Conserved Hypothetical protein [Corynebacterium pseudotuberculosis
I19]
gi|341825886|gb|AEK93407.1| Hypothetical protein CpPAT10_2097 [Corynebacterium pseudotuberculosis
PAT10]
Length=198
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/181 (46%), Positives = 116/181 (65%), Gaps = 0/181 (0%)
Query 22 GTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTM 81
G LL+A + +P F RSVI ++EHN+ T GV L S+ AV+NV+P+WA L +KP+ +
Sbjct 18 GMLLIAAPSMEDPVFARSVILLLEHNEATTFGVNLASRSDVAVFNVMPEWAPLVSKPQAL 77
Query 82 FIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAG 141
+IGGP+ + + + V G D P +A RLV VDL PE +AA + G+R++AG
Sbjct 78 YIGGPLNQQGVIGIGVSAPGVDIVSHPHFNRLANRLVHVDLRTQPEDVAADLSGLRLFAG 137
Query 142 YSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSR 201
Y+ W GQL EIE+ +W V AL SDV D+WG V+RRQP+PL L +T+P+D+S
Sbjct 138 YAEWEPGQLNEEIEKGEWYVAPALSSDVTAAGNVDVWGDVMRRQPMPLPLYSTYPMDVSE 197
Query 202 N 202
N
Sbjct 198 N 198
>gi|255324027|ref|ZP_05365152.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311740247|ref|ZP_07714078.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|255298884|gb|EET78176.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311304630|gb|EFQ80702.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=198
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/181 (46%), Positives = 117/181 (65%), Gaps = 0/181 (0%)
Query 22 GTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTM 81
G LL+A +L P F RSVI ++EHND T GV L + SE A++NVLP+W + AKP+ +
Sbjct 18 GQLLIAAPGMLSPEFARSVILVIEHNDMMTFGVDLTKRSEVAIFNVLPEWLPVVAKPQAL 77
Query 82 FIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAG 141
+IGGP+ + + + LA G DP+ L +A RL VDL A+PE + V G+R++AG
Sbjct 78 YIGGPLNQQSVVGLAQTNQGVDPDKHDRLTRLAPRLAHVDLRAEPEEIEPLVSGMRMFAG 137
Query 142 YSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSR 201
Y+ W GQLE EIE +W V AL DV+ ADLW V++RQP+PL L +T+P+++
Sbjct 138 YAEWGPGQLEEEIEAGEWFVSPALAQDVITPGPADLWSDVMKRQPMPLPLYSTYPVNVED 197
Query 202 N 202
N
Sbjct 198 N 198
>gi|19554273|ref|NP_602275.1| hypothetical protein NCgl2978 [Corynebacterium glutamicum ATCC
13032]
gi|62391930|ref|YP_227332.1| hypothetical protein cg3414 [Corynebacterium glutamicum ATCC
13032]
gi|41223077|emb|CAF19022.1| Putative transcriptional regulator [Corynebacterium glutamicum
ATCC 13032]
Length=201
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/186 (45%), Positives = 115/186 (62%), Gaps = 0/186 (0%)
Query 17 QRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAA 76
V G LL+A D+ F RS++ I+EH+ T GV ++ S+ AV NVLP+W L +
Sbjct 16 NEVAPGMLLVAAPDMASEDFERSIVLIIEHSPATTFGVNISSRSDVAVANVLPEWVDLTS 75
Query 77 KPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGV 136
KP+ ++IGGP+ + A + L V + G D E +A RLV VDL + PE +A +EG+
Sbjct 76 KPQALYIGGPLSQQAVVGLGVTKPGVDIENSTSFNKLANRLVHVDLRSAPEDVADDLEGM 135
Query 137 RIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHP 196
R +AGY+ W GQL EIE+ DW V ALPSD++ R D+WG V+RRQ +PL L +T P
Sbjct 136 RFFAGYAEWAPGQLNEEIEQGDWFVTPALPSDIIAPGRVDIWGDVMRRQAMPLPLYSTFP 195
Query 197 IDLSRN 202
D S N
Sbjct 196 SDPSDN 201
Lambda K H
0.320 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 220408776486
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40