BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0044c Length=264 Score E Sequences producing significant alignments: (Bits) Value gi|15607186|ref|NP_214558.1| oxidoreductase [Mycobacterium tuber... 536 1e-150 gi|306801617|ref|ZP_07438285.1| oxidoreductase [Mycobacterium tu... 534 6e-150 gi|308380882|ref|ZP_07491334.2| oxidoreductase [Mycobacterium tu... 528 4e-148 gi|240168773|ref|ZP_04747432.1| oxidoreductase [Mycobacterium ka... 462 3e-128 gi|339293120|gb|AEJ45231.1| oxidoreductase [Mycobacterium tuberc... 455 2e-126 gi|183980098|ref|YP_001848389.1| oxidoreductase [Mycobacterium m... 450 1e-124 gi|296167080|ref|ZP_06849491.1| MmcI protein [Mycobacterium para... 447 8e-124 gi|118615974|ref|YP_904306.1| oxidoreductase [Mycobacterium ulce... 447 1e-123 gi|118463089|ref|YP_879361.1| MmcI protein [Mycobacterium avium ... 445 3e-123 gi|254773106|ref|ZP_05214622.1| MmcI protein [Mycobacterium aviu... 445 3e-123 gi|41406152|ref|NP_958988.1| hypothetical protein MAP0054c [Myco... 441 7e-122 gi|336459431|gb|EGO38373.1| putative oxidoreductase, MSMEG_2906 ... 440 1e-121 gi|342860230|ref|ZP_08716882.1| hypothetical protein MCOL_15175 ... 429 1e-118 gi|108802340|ref|YP_642537.1| hypothetical protein Mmcs_5381 [My... 420 1e-115 gi|118468799|ref|YP_891106.1| MmcI protein [Mycobacterium smegma... 412 2e-113 gi|120406975|ref|YP_956804.1| hypothetical protein Mvan_6045 [My... 412 3e-113 gi|145221454|ref|YP_001132132.1| hypothetical protein Mflv_0860 ... 412 4e-113 gi|333992957|ref|YP_004525571.1| oxidoreductase [Mycobacterium s... 404 7e-111 gi|254820305|ref|ZP_05225306.1| hypothetical protein MintA_10271... 400 1e-109 gi|262204592|ref|YP_003275800.1| Coenzyme F420-dependent N5 N10-... 397 1e-108 gi|343928664|ref|ZP_08768109.1| hypothetical protein GOALK_120_0... 395 4e-108 gi|326383869|ref|ZP_08205553.1| Coenzyme F420-dependent N5 N10-m... 378 4e-103 gi|336320977|ref|YP_004600945.1| oxidoreductase [Cellvibrio gilv... 355 4e-96 gi|332670801|ref|YP_004453809.1| oxidoreductase [Cellulomonas fi... 353 1e-95 gi|226309397|ref|YP_002769357.1| hypothetical protein RER_59100 ... 352 4e-95 gi|296130079|ref|YP_003637329.1| oxidoreductase [Cellulomonas fl... 350 9e-95 gi|257056770|ref|YP_003134602.1| flavin-dependent oxidoreductase... 345 3e-93 gi|296138376|ref|YP_003645619.1| hypothetical protein Tpau_0643 ... 345 3e-93 gi|300784229|ref|YP_003764520.1| hypothetical protein AMED_2321 ... 343 1e-92 gi|325677376|ref|ZP_08157041.1| MmcI protein [Rhodococcus equi A... 342 2e-92 gi|312141963|ref|YP_004009299.1| hypothetical protein REQ_46810 ... 342 4e-92 gi|333922201|ref|YP_004495782.1| hypothetical protein AS9A_4550 ... 342 5e-92 gi|269956124|ref|YP_003325913.1| Coenzyme F420-dependent N5 N10-... 342 5e-92 gi|111020448|ref|YP_703420.1| 5,10-methylenetetrahydromethanopte... 340 1e-91 gi|258650456|ref|YP_003199612.1| coenzyme F420-dependent N5 N10-... 340 2e-91 gi|229820279|ref|YP_002881805.1| oxidoreductase [Beutenbergia ca... 338 5e-91 gi|88855268|ref|ZP_01129933.1| hypothetical protein A20C1_05281 ... 335 5e-90 gi|326332275|ref|ZP_08198555.1| putative F420-dependent oxidored... 332 3e-89 gi|331696947|ref|YP_004333186.1| putative F420-dependent oxidore... 330 1e-88 gi|324999834|ref|ZP_08120946.1| hypothetical protein PseP1_13746... 330 1e-88 gi|334336843|ref|YP_004541995.1| F420-dependent oxidoreductase, ... 328 4e-88 gi|284031593|ref|YP_003381524.1| Coenzyme F420-dependent N5 N10-... 327 1e-87 gi|152966846|ref|YP_001362630.1| hypothetical protein Krad_2902 ... 323 2e-86 gi|317508040|ref|ZP_07965728.1| oxidoreductase [Segniliparus rug... 320 2e-85 gi|319948247|ref|ZP_08022401.1| MmcI protein [Dietzia cinnamea P... 312 4e-83 gi|336119675|ref|YP_004574452.1| hypothetical protein MLP_40350 ... 311 9e-83 gi|226362667|ref|YP_002780445.1| hypothetical protein ROP_32530 ... 310 2e-82 gi|269794474|ref|YP_003313929.1| F420-dependent methylene-tetrah... 305 4e-81 gi|317507402|ref|ZP_07965136.1| oxidoreductase [Segniliparus rug... 303 2e-80 gi|54027512|ref|YP_121754.1| hypothetical protein nfa55380 [Noca... 303 2e-80 >gi|15607186|ref|NP_214558.1| oxidoreductase [Mycobacterium tuberculosis H37Rv] gi|15839421|ref|NP_334458.1| hypothetical protein MT0050 [Mycobacterium tuberculosis CDC1551] gi|31791221|ref|NP_853714.1| oxidoreductase [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=264 Score = 536 bits (1381), Expect = 1e-150, Method: Compositional matrix adjust. Identities = 264/264 (100%), Positives = 264/264 (100%), Gaps = 0/264 (0%) Query 1 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH 60 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH Sbjct 1 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH 60 Query 61 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK 120 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK Sbjct 61 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK 120 Query 121 DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY 180 DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY Sbjct 121 DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY 180 Query 181 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL 240 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL Sbjct 181 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL 240 Query 241 TVGCDGPDYDLSAAAALCRWRDGR 264 TVGCDGPDYDLSAAAALCRWRDGR Sbjct 241 TVGCDGPDYDLSAAAALCRWRDGR 264 >gi|306801617|ref|ZP_07438285.1| oxidoreductase [Mycobacterium tuberculosis SUMu008] gi|308351632|gb|EFP40483.1| oxidoreductase [Mycobacterium tuberculosis SUMu008] Length=264 Score = 534 bits (1375), Expect = 6e-150, Method: Compositional matrix adjust. Identities = 263/264 (99%), Positives = 263/264 (99%), Gaps = 0/264 (0%) Query 1 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH 60 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH Sbjct 1 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH 60 Query 61 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK 120 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK Sbjct 61 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK 120 Query 121 DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY 180 DYDEYGYRFGTAGSRLDDLA ALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY Sbjct 121 DYDEYGYRFGTAGSRLDDLADALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY 180 Query 181 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL 240 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL Sbjct 181 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL 240 Query 241 TVGCDGPDYDLSAAAALCRWRDGR 264 TVGCDGPDYDLSAAAALCRWRDGR Sbjct 241 TVGCDGPDYDLSAAAALCRWRDGR 264 >gi|308380882|ref|ZP_07491334.2| oxidoreductase [Mycobacterium tuberculosis SUMu011] gi|308360230|gb|EFP49081.1| oxidoreductase [Mycobacterium tuberculosis SUMu011] Length=260 Score = 528 bits (1359), Expect = 4e-148, Method: Compositional matrix adjust. Identities = 259/260 (99%), Positives = 260/260 (100%), Gaps = 0/260 (0%) Query 5 VRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECW 64 +RPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECW Sbjct 1 MRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECW 60 Query 65 TVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDE 124 TVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDE Sbjct 61 TVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDE 120 Query 125 YGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIW 184 YGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIW Sbjct 121 YGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIW 180 Query 185 HSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGC 244 HSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGC Sbjct 181 HSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGC 240 Query 245 DGPDYDLSAAAALCRWRDGR 264 DGPDYDLSAAAALCRWRDGR Sbjct 241 DGPDYDLSAAAALCRWRDGR 260 >gi|240168773|ref|ZP_04747432.1| oxidoreductase [Mycobacterium kansasii ATCC 12478] Length=262 Score = 462 bits (1188), Expect = 3e-128, Method: Compositional matrix adjust. Identities = 225/263 (86%), Positives = 238/263 (91%), Gaps = 2/263 (0%) Query 1 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH 60 MTS V PDLP+RIGVQLQPQHAPHY +RDAVRRCEDIGVDIAF WDHFFPLYG PDG H Sbjct 1 MTSAVHPDLPIRIGVQLQPQHAPHYGDIRDAVRRCEDIGVDIAFNWDHFFPLYGAPDGAH 60 Query 61 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK 120 FECWT+LGAWAEQTS I+IGALVTCNSYRNPELLADMARTVDHIS GRL+LGIGSGWKQK Sbjct 61 FECWTMLGAWAEQTSRIQIGALVTCNSYRNPELLADMARTVDHISDGRLVLGIGSGWKQK 120 Query 121 DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY 180 DYDEYGY FGTAGSRLDDLAAALPRIKARL KLNPPPTRDIPVLIGGGGERKTLRLVAE+ Sbjct 121 DYDEYGYEFGTAGSRLDDLAAALPRIKARLAKLNPPPTRDIPVLIGGGGERKTLRLVAEH 180 Query 181 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL 240 AD+WHSFTA D + AK+AVL+ HC+ VGR+PA IERSAAV GG IA AEAL LGVTLL Sbjct 181 ADMWHSFTAADEFEAKAAVLNRHCADVGRDPAAIERSAAVTGG--IADAEALVRLGVTLL 238 Query 241 TVGCDGPDYDLSAAAALCRWRDG 263 TVGCDGPDYDL+AA LCRWRDG Sbjct 239 TVGCDGPDYDLTAAEQLCRWRDG 261 >gi|339293120|gb|AEJ45231.1| oxidoreductase [Mycobacterium tuberculosis CCDC5079] Length=225 Score = 455 bits (1171), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 224/225 (99%), Positives = 225/225 (100%), Gaps = 0/225 (0%) Query 40 VDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMAR 99 +DIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMAR Sbjct 1 MDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMAR 60 Query 100 TVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTR 159 TVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTR Sbjct 61 TVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTR 120 Query 160 DIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAA 219 DIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAA Sbjct 121 DIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAA 180 Query 220 VDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR 264 VDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR Sbjct 181 VDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR 225 >gi|183980098|ref|YP_001848389.1| oxidoreductase [Mycobacterium marinum M] gi|183173424|gb|ACC38534.1| oxidoreductase [Mycobacterium marinum M] Length=265 Score = 450 bits (1158), Expect = 1e-124, Method: Compositional matrix adjust. Identities = 222/265 (84%), Positives = 235/265 (89%), Gaps = 1/265 (0%) Query 1 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH 60 MTS V PD P+RIGVQLQPQHA HY +RDAVRRCEDIGVDIAF WDHFFPL+GDPDG H Sbjct 1 MTSPVHPDRPLRIGVQLQPQHASHYGDIRDAVRRCEDIGVDIAFNWDHFFPLFGDPDGAH 60 Query 61 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK 120 FECWT+L AWAEQTS I+IGALVTCNSYRNPELLADMARTVDHI GRLILGIGSGWKQK Sbjct 61 FECWTMLAAWAEQTSRIQIGALVTCNSYRNPELLADMARTVDHICDGRLILGIGSGWKQK 120 Query 121 DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY 180 DYDEYGY FGTAGSRLDDLA ALPRIK RL KLNP PTRDIPVLIGGGGERKTLRLVAE+ Sbjct 121 DYDEYGYEFGTAGSRLDDLAGALPRIKTRLAKLNPAPTRDIPVLIGGGGERKTLRLVAEH 180 Query 181 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAV-DGGGLIASAEALAGLGVTL 239 ADIWHSFT D + AKSAVL+ HC+ VGR+PATIERSAA+ D G L A A+ALAGLGVTL Sbjct 181 ADIWHSFTGVDEFPAKSAVLARHCADVGRDPATIERSAALQDSGRLSADADALAGLGVTL 240 Query 240 LTVGCDGPDYDLSAAAALCRWRDGR 264 LTVGCDGPDYDL+AA ALCRWRD R Sbjct 241 LTVGCDGPDYDLAAAEALCRWRDSR 265 >gi|296167080|ref|ZP_06849491.1| MmcI protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897570|gb|EFG77165.1| MmcI protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=272 Score = 447 bits (1150), Expect = 8e-124, Method: Compositional matrix adjust. Identities = 216/258 (84%), Positives = 230/258 (90%), Gaps = 1/258 (0%) Query 8 DLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVL 67 DLPV IGVQLQPQHAP YR +RDAVRRCEDIGVDIAF WDHFFPLYGDPDG HFECWT+L Sbjct 15 DLPVHIGVQLQPQHAPDYRQIRDAVRRCEDIGVDIAFNWDHFFPLYGDPDGAHFECWTML 74 Query 68 GAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGY 127 GAWAEQTS I+IGALVTCNSYRNPELLADMARTVDHIS GRL+LGIGSGWKQKDYDEYGY Sbjct 75 GAWAEQTSRIQIGALVTCNSYRNPELLADMARTVDHISDGRLVLGIGSGWKQKDYDEYGY 134 Query 128 RFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSF 187 FGTAGSRLDDLA+ALPRI +RL KLNPPPT DIPVLIGGGGERKTLRLVAEYADIWHSF Sbjct 135 EFGTAGSRLDDLASALPRITSRLAKLNPPPTHDIPVLIGGGGERKTLRLVAEYADIWHSF 194 Query 188 TAGDSYLAKSAVLSTHCSTVGRNPATIERSAAV-DGGGLIASAEALAGLGVTLLTVGCDG 246 T+ D + AKS VL+ HC+ VGR PA IERSAAV + G L+ +AE L GLGVTLLTV CDG Sbjct 195 TSADEFPAKSEVLARHCADVGREPAGIERSAAVPNRGALVDNAETLVGLGVTLLTVACDG 254 Query 247 PDYDLSAAAALCRWRDGR 264 P YDL+AA ALCRWRDGR Sbjct 255 PAYDLAAAEALCRWRDGR 272 >gi|118615974|ref|YP_904306.1| oxidoreductase [Mycobacterium ulcerans Agy99] gi|118568084|gb|ABL02835.1| oxidoreductase [Mycobacterium ulcerans Agy99] Length=265 Score = 447 bits (1149), Expect = 1e-123, Method: Compositional matrix adjust. Identities = 221/265 (84%), Positives = 234/265 (89%), Gaps = 1/265 (0%) Query 1 MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH 60 MTS V PD P+RIGVQLQPQHA HY +RDAVRRCEDIGVDIAF WDHFFPL+GDPDG H Sbjct 1 MTSPVHPDRPLRIGVQLQPQHASHYGDIRDAVRRCEDIGVDIAFNWDHFFPLFGDPDGAH 60 Query 61 FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK 120 FECWT+L AWAEQTS I+IGALVTCNSYRNPELLADMARTVDHI GRLILGIGSGWKQK Sbjct 61 FECWTMLAAWAEQTSRIQIGALVTCNSYRNPELLADMARTVDHICDGRLILGIGSGWKQK 120 Query 121 DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY 180 DYDEYGY FGTAGSRLDDLA ALPRIK RL KL P PTRDIPVLIGGGGERKTLRLVAE+ Sbjct 121 DYDEYGYEFGTAGSRLDDLAGALPRIKTRLAKLIPAPTRDIPVLIGGGGERKTLRLVAEH 180 Query 181 ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAV-DGGGLIASAEALAGLGVTL 239 ADIWHSFT D + AKSAVL+ HC+ VGR+PATIERSAA+ D G L A A+ALAGLGVTL Sbjct 181 ADIWHSFTGVDEFPAKSAVLARHCADVGRDPATIERSAALQDSGRLSADADALAGLGVTL 240 Query 240 LTVGCDGPDYDLSAAAALCRWRDGR 264 LTVGCDGPDYDL+AA ALCRWRD R Sbjct 241 LTVGCDGPDYDLAAAEALCRWRDSR 265 >gi|118463089|ref|YP_879361.1| MmcI protein [Mycobacterium avium 104] gi|118164376|gb|ABK65273.1| MmcI protein [Mycobacterium avium 104] Length=259 Score = 445 bits (1145), Expect = 3e-123, Method: Compositional matrix adjust. Identities = 215/256 (84%), Positives = 230/256 (90%), Gaps = 1/256 (0%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIGVQLQPQHAP Y +RDAVRRCEDIGVDIAF WDHFFPLYGDPDG HFECWT+LGA Sbjct 4 PIRIGVQLQPQHAPQYNQIRDAVRRCEDIGVDIAFNWDHFFPLYGDPDGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTS I+IGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY F Sbjct 64 WAEQTSRIQIGALVTCNSYRNPELLADMARTVDHISEGRLILGIGSGWKQKDYDEYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSRLDDLA ALPRI+ARL KLNP PTRDIPVLIGGGGERKTLRLVA++ADIWHSFT+ Sbjct 124 GTAGSRLDDLAGALPRIEARLAKLNPAPTRDIPVLIGGGGERKTLRLVAQHADIWHSFTS 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG-LIASAEALAGLGVTLLTVGCDGPD 248 + Y AKS VL+ HC+ VGR+P IERSAAV GG L+A+AEAL GLGVTLLTVGCDGPD Sbjct 184 AEEYPAKSEVLARHCADVGRDPDRIERSAAVKGGAELLANAEALVGLGVTLLTVGCDGPD 243 Query 249 YDLSAAAALCRWRDGR 264 YDL A ALC+WRDGR Sbjct 244 YDLRDAQALCKWRDGR 259 >gi|254773106|ref|ZP_05214622.1| MmcI protein [Mycobacterium avium subsp. avium ATCC 25291] Length=259 Score = 445 bits (1145), Expect = 3e-123, Method: Compositional matrix adjust. Identities = 215/256 (84%), Positives = 230/256 (90%), Gaps = 1/256 (0%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIGVQLQPQHAP Y +RDAVRRCEDIGVDIAF WDHFFPLYGDPDG HFECWT+LGA Sbjct 4 PIRIGVQLQPQHAPQYNQIRDAVRRCEDIGVDIAFNWDHFFPLYGDPDGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTS I+IGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY F Sbjct 64 WAEQTSRIQIGALVTCNSYRNPELLADMARTVDHISEGRLILGIGSGWKQKDYDEYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSRLDDLA ALPRI+ARL KLNP PTRDIPVLIGGGGERKTLRLVA++ADIWHSFT+ Sbjct 124 GTAGSRLDDLAGALPRIEARLAKLNPAPTRDIPVLIGGGGERKTLRLVAQHADIWHSFTS 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG-LIASAEALAGLGVTLLTVGCDGPD 248 + Y AKS VL+ HC+ VGR+P IERSAAV GG L+A+AEAL GLGVTLLTVGCDGPD Sbjct 184 AEEYPAKSEVLARHCADVGRDPDRIERSAAVKGGAELLANAEALVGLGVTLLTVGCDGPD 243 Query 249 YDLSAAAALCRWRDGR 264 YDL A ALC+WRDGR Sbjct 244 YDLRDAEALCKWRDGR 259 >gi|41406152|ref|NP_958988.1| hypothetical protein MAP0054c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394500|gb|AAS02371.1| hypothetical protein MAP_0054c [Mycobacterium avium subsp. paratuberculosis K-10] Length=262 Score = 441 bits (1133), Expect = 7e-122, Method: Compositional matrix adjust. Identities = 213/256 (84%), Positives = 228/256 (90%), Gaps = 1/256 (0%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIGVQLQPQH P Y +RDAVRRCEDIGVDIAF WDHFFPLYGDPDG HFECWT+LGA Sbjct 7 PIRIGVQLQPQHTPQYNQIRDAVRRCEDIGVDIAFNWDHFFPLYGDPDGAHFECWTMLGA 66 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTS I+IGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY F Sbjct 67 WAEQTSRIQIGALVTCNSYRNPELLADMARTVDHISEGRLILGIGSGWKQKDYDEYGYEF 126 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSRLDDLA ALPRI+ARL KLNP PTRDIPVLIGGGGERKTLRLVA++ADIWHSFT+ Sbjct 127 GTAGSRLDDLAGALPRIEARLAKLNPAPTRDIPVLIGGGGERKTLRLVAQHADIWHSFTS 186 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG-LIASAEALAGLGVTLLTVGCDGPD 248 + Y AKS VL+ HC+ VGR+P IERSAAV GG L+A+AEAL GLGVTLLTVGCDGP Sbjct 187 AEEYPAKSEVLARHCADVGRDPDRIERSAAVKGGAELLANAEALVGLGVTLLTVGCDGPY 246 Query 249 YDLSAAAALCRWRDGR 264 YDL A ALC+WRDGR Sbjct 247 YDLRDAEALCKWRDGR 262 >gi|336459431|gb|EGO38373.1| putative oxidoreductase, MSMEG_2906 family [Mycobacterium avium subsp. paratuberculosis S397] Length=259 Score = 440 bits (1131), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 213/256 (84%), Positives = 228/256 (90%), Gaps = 1/256 (0%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIGVQLQPQH P Y +RDAVRRCEDIGVDIAF WDHFFPLYGDPDG HFECWT+LGA Sbjct 4 PIRIGVQLQPQHTPQYNQIRDAVRRCEDIGVDIAFNWDHFFPLYGDPDGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTS I+IGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY F Sbjct 64 WAEQTSRIQIGALVTCNSYRNPELLADMARTVDHISEGRLILGIGSGWKQKDYDEYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSRLDDLA ALPRI+ARL KLNP PTRDIPVLIGGGGERKTLRLVA++ADIWHSFT+ Sbjct 124 GTAGSRLDDLAGALPRIEARLAKLNPAPTRDIPVLIGGGGERKTLRLVAQHADIWHSFTS 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG-LIASAEALAGLGVTLLTVGCDGPD 248 + Y AKS VL+ HC+ VGR+P IERSAAV GG L+A+AEAL GLGVTLLTVGCDGP Sbjct 184 AEEYPAKSEVLARHCADVGRDPDRIERSAAVKGGAELLANAEALVGLGVTLLTVGCDGPY 243 Query 249 YDLSAAAALCRWRDGR 264 YDL A ALC+WRDGR Sbjct 244 YDLRDAEALCKWRDGR 259 >gi|342860230|ref|ZP_08716882.1| hypothetical protein MCOL_15175 [Mycobacterium colombiense CECT 3035] gi|342132608|gb|EGT85837.1| hypothetical protein MCOL_15175 [Mycobacterium colombiense CECT 3035] Length=270 Score = 429 bits (1104), Expect = 1e-118, Method: Compositional matrix adjust. Identities = 206/267 (78%), Positives = 227/267 (86%), Gaps = 10/267 (3%) Query 8 DLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVL 67 + PVRIGVQLQPQHAPHYR +RDAVRRCEDIGVDIAF WDHFFPLYGDP+G HFECWT+L Sbjct 4 EFPVRIGVQLQPQHAPHYRQMRDAVRRCEDIGVDIAFNWDHFFPLYGDPEGAHFECWTML 63 Query 68 GAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGY 127 GAWAEQTS I+IGALVTCNSYRNPELLADMARTVDHIS GRLILGIG+GWKQKDYDEYGY Sbjct 64 GAWAEQTSRIQIGALVTCNSYRNPELLADMARTVDHISDGRLILGIGAGWKQKDYDEYGY 123 Query 128 RFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSF 187 FGTAGSRL+DLAAALPRI+ARL KLNP PTRDIP+LIGG G RKTLR+VAEY DIWH F Sbjct 124 EFGTAGSRLNDLAAALPRIQARLAKLNPAPTRDIPILIGGKGPRKTLRMVAEYGDIWHGF 183 Query 188 TAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGG----------GLIASAEALAGLGV 237 T ++Y +AVL HC+ VGR+P+TIERSA V+ GLIA+AE L LGV Sbjct 184 TTVETYPDAAAVLEEHCAAVGRDPSTIERSAGVENNSGVRRGEGLDGLIANAEGLTALGV 243 Query 238 TLLTVGCDGPDYDLSAAAALCRWRDGR 264 TLLTVG +GPDYDL+AA ALC+WRD R Sbjct 244 TLLTVGVNGPDYDLTAAEALCKWRDSR 270 >gi|108802340|ref|YP_642537.1| hypothetical protein Mmcs_5381 [Mycobacterium sp. MCS] gi|119871493|ref|YP_941445.1| hypothetical protein Mkms_5470 [Mycobacterium sp. KMS] gi|126438320|ref|YP_001074011.1| hypothetical protein Mjls_5757 [Mycobacterium sp. JLS] gi|108772759|gb|ABG11481.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697582|gb|ABL94655.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126238120|gb|ABO01521.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=264 Score = 420 bits (1080), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 201/258 (78%), Positives = 221/258 (86%), Gaps = 3/258 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIGVQLQPQH+P YR +RDAVRRCEDIGVD+AF WDHFFPLYGDPDG H+ECWT+L A Sbjct 7 PVRIGVQLQPQHSPEYRHIRDAVRRCEDIGVDVAFNWDHFFPLYGDPDGAHYECWTMLAA 66 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTS IEIGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY F Sbjct 67 WAEQTSRIEIGALVTCNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYDEYGYEF 126 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSRLDDLA ALPRIK+RL KLNP PTR+IP+LIGG GERKTLRLVAEYADIWH FT Sbjct 127 GTAGSRLDDLARALPRIKSRLAKLNPAPTREIPILIGGQGERKTLRLVAEYADIWHGFTD 186 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG---LIASAEALAGLGVTLLTVGCDG 246 +Y K+ VL HC+ VGR+P+ +ERS+ V G ++A A+AL LGVTLLTVG +G Sbjct 187 RTTYPGKAEVLDRHCADVGRDPSAVERSSGVPESGKDAMLAEADALVELGVTLLTVGVNG 246 Query 247 PDYDLSAAAALCRWRDGR 264 PDYDL+AA LCRWRD R Sbjct 247 PDYDLTAAETLCRWRDSR 264 >gi|118468799|ref|YP_891106.1| MmcI protein [Mycobacterium smegmatis str. MC2 155] gi|118170086|gb|ABK70982.1| MmcI protein [Mycobacterium smegmatis str. MC2 155] Length=257 Score = 412 bits (1060), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 200/254 (79%), Positives = 223/254 (88%), Gaps = 4/254 (1%) Query 15 VQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQT 74 +QLQPQH+P YR +RDAVRRCEDIGVDIAF WDHFFPLYGDPDG H+ECWT+LGAWAEQT Sbjct 1 MQLQPQHSPEYRFIRDAVRRCEDIGVDIAFNWDHFFPLYGDPDGAHYECWTMLGAWAEQT 60 Query 75 SHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGS 134 S IEIGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY FGTAGS Sbjct 61 SRIEIGALVTCNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYDEYGYEFGTAGS 120 Query 135 RLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYL 194 RLDDLAAALPRI+ARL KLNP PTR+IP+LIGG GERKTL LVAE+A IWH+F ++Y Sbjct 121 RLDDLAAALPRIRARLDKLNPAPTREIPILIGGQGERKTLPLVAEHAHIWHAFVDRNTYP 180 Query 195 AKSAVLSTHCSTVGRNPATIERSAAV--DGG--GLIASAEALAGLGVTLLTVGCDGPDYD 250 K+ VL +HC +VGR+ A+IERSA V DGG ++A A+ALA LGVT+LTVG +GPDYD Sbjct 181 GKAEVLDSHCESVGRDAASIERSAGVQSDGGIEAMLAEADALADLGVTILTVGANGPDYD 240 Query 251 LSAAAALCRWRDGR 264 L+AA ALCRWRDGR Sbjct 241 LTAAEALCRWRDGR 254 >gi|120406975|ref|YP_956804.1| hypothetical protein Mvan_6045 [Mycobacterium vanbaalenii PYR-1] gi|119959793|gb|ABM16798.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=265 Score = 412 bits (1059), Expect = 3e-113, Method: Compositional matrix adjust. Identities = 196/259 (76%), Positives = 219/259 (85%), Gaps = 3/259 (1%) Query 9 LPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLG 68 P+RIGVQLQPQH+P Y +RDAVRRCED+GVD+AF WDHFFPLYGDPDG HFECWT+LG Sbjct 3 FPIRIGVQLQPQHSPRYGHLRDAVRRCEDLGVDVAFNWDHFFPLYGDPDGAHFECWTMLG 62 Query 69 AWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYR 128 AWAEQTS IEIGALV+CNSYRNPELLADMARTVDHIS GRLILGIGSGWK+KDYDEYGY Sbjct 63 AWAEQTSRIEIGALVSCNSYRNPELLADMARTVDHISDGRLILGIGSGWKRKDYDEYGYE 122 Query 129 FGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFT 188 FGTAGSRLDDLA A+PRI+ARL KLNP P RDIPVLIGGGGE+KTLRLVA +A IWHSF+ Sbjct 123 FGTAGSRLDDLAVAMPRIEARLDKLNPQPVRDIPVLIGGGGEKKTLRLVARHAQIWHSFS 182 Query 189 AGDSYLAKSAVLSTHCSTVGRNPATIERSAAV---DGGGLIASAEALAGLGVTLLTVGCD 245 DSY KS +L+ HC+ GR+PATIERSA D LI +A+AL LG+T+ TVG + Sbjct 183 DTDSYPRKSDILARHCAEAGRDPATIERSAEAMGRDADALIENADALHALGITMFTVGVN 242 Query 246 GPDYDLSAAAALCRWRDGR 264 GPDYDL+ A LCRWRD R Sbjct 243 GPDYDLAQAEVLCRWRDRR 261 >gi|145221454|ref|YP_001132132.1| hypothetical protein Mflv_0860 [Mycobacterium gilvum PYR-GCK] gi|315446794|ref|YP_004079673.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase [Mycobacterium sp. Spyr1] gi|145213940|gb|ABP43344.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315265097|gb|ADU01839.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase [Mycobacterium sp. Spyr1] Length=269 Score = 412 bits (1058), Expect = 4e-113, Method: Compositional matrix adjust. Identities = 194/256 (76%), Positives = 217/256 (85%), Gaps = 3/256 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIGVQLQPQH+P Y +RDAVRRCEDIGVD+ F WDHFFPLYGDPDG HFECWT+LGA Sbjct 8 PIRIGVQLQPQHSPRYDLMRDAVRRCEDIGVDVVFNWDHFFPLYGDPDGAHFECWTMLGA 67 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTS +EIGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY F Sbjct 68 WAEQTSRVEIGALVTCNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYDEYGYEF 127 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT GSRLDDLAAALPRI++RL KLNP P RDIPVLIGGGGERKTLR+VA++A IWHSF+ Sbjct 128 GTVGSRLDDLAAALPRIESRLSKLNPQPVRDIPVLIGGGGERKTLRMVAQHAHIWHSFSD 187 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDG---GGLIASAEALAGLGVTLLTVGCDG 246 ++Y KS +L+ HC+ VGR+P IERSA G L+ +A AL LGV++LTVG +G Sbjct 188 TETYPRKSEILARHCADVGRDPDAIERSAEAKGRTEDALLENAAALTSLGVSMLTVGVNG 247 Query 247 PDYDLSAAAALCRWRD 262 PDYDLS A LCRWRD Sbjct 248 PDYDLSQAETLCRWRD 263 >gi|333992957|ref|YP_004525571.1| oxidoreductase [Mycobacterium sp. JDM601] gi|333488925|gb|AEF38317.1| oxidoreductase [Mycobacterium sp. JDM601] Length=254 Score = 404 bits (1038), Expect = 7e-111, Method: Compositional matrix adjust. Identities = 193/254 (76%), Positives = 218/254 (86%), Gaps = 4/254 (1%) Query 15 VQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQT 74 +QL PQHA Y A+RDAV RCED+GVD+AF WDHFFPLYGDPDGPHFECWT+LGAWAEQT Sbjct 1 MQLHPQHAAQYGAIRDAVGRCEDLGVDVAFNWDHFFPLYGDPDGPHFECWTMLGAWAEQT 60 Query 75 SHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGS 134 S I+IGALVTCNSYRNPELLADMARTVDHI GRLILGIGSGWK +DY EYGY FGTAGS Sbjct 61 SRIQIGALVTCNSYRNPELLADMARTVDHIGDGRLILGIGSGWKDRDYHEYGYEFGTAGS 120 Query 135 RLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYL 194 RLDDLAAALPRIK RL +LNPPPTR IP+LIGGGGERKTLRLVAE+AD+WHSFT D+Y Sbjct 121 RLDDLAAALPRIKTRLSQLNPPPTRHIPLLIGGGGERKTLRLVAEHADMWHSFTDADTYP 180 Query 195 AKSAVLSTHCSTVGRNPATIERSAAVDG----GGLIASAEALAGLGVTLLTVGCDGPDYD 250 K+A+L+ HC+ +GR+PATIE S A+ L+A+AE++A LGV+LLTVG GPDYD Sbjct 181 HKAAILAEHCAALGRDPATIEHSTALGNDHTEAELLAAAESMAELGVSLLTVGSSGPDYD 240 Query 251 LSAAAALCRWRDGR 264 L+AA ALCRWRD R Sbjct 241 LTAAEALCRWRDQR 254 >gi|254820305|ref|ZP_05225306.1| hypothetical protein MintA_10271 [Mycobacterium intracellulare ATCC 13950] Length=234 Score = 400 bits (1028), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 194/234 (83%), Positives = 210/234 (90%), Gaps = 1/234 (0%) Query 32 VRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNP 91 +RRCEDIGVDIAF WDHFFPLYGDPDG HFECWT+LGAWAEQTS I+IGALVTCNSYRNP Sbjct 1 MRRCEDIGVDIAFNWDHFFPLYGDPDGAHFECWTMLGAWAEQTSRIQIGALVTCNSYRNP 60 Query 92 ELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLG 151 ELLADMARTVDHIS GRLILGIGSGWKQKDYDEYGY FGTAGSRLDDLA ALPRIK+RL Sbjct 61 ELLADMARTVDHISDGRLILGIGSGWKQKDYDEYGYEFGTAGSRLDDLATALPRIKSRLA 120 Query 152 KLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNP 211 KLNP PTR+IP+LIGGGGERKTLRLVAE+A IWHSFTA D + AKS VL+ HC+ VGR+P Sbjct 121 KLNPAPTREIPILIGGGGERKTLRLVAEHAHIWHSFTAADEFPAKSEVLARHCADVGRDP 180 Query 212 ATIERSAAV-DGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR 264 A IERSAAV +GG L+A+AE L GLGVTLLTVGCDGP YDLS A ALC+WR+ R Sbjct 181 AGIERSAAVKNGGELLANAETLVGLGVTLLTVGCDGPGYDLSDAEALCKWRNNR 234 >gi|262204592|ref|YP_003275800.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Gordonia bronchialis DSM 43247] gi|262087939|gb|ACY23907.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Gordonia bronchialis DSM 43247] Length=266 Score = 397 bits (1019), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 192/260 (74%), Positives = 212/260 (82%), Gaps = 5/260 (1%) Query 8 DLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVL 67 + P+RIGVQLQPQHA Y +RDAVRR ED+GVD+AF WDHFFPLYGDPDG HFECWT+L Sbjct 5 EFPLRIGVQLQPQHASEYSTIRDAVRRAEDLGVDVAFNWDHFFPLYGDPDGAHFECWTML 64 Query 68 GAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGY 127 GAWAEQT+ +EIGALVTCNSYRNPELLADMARTVDHIS GRLILGIGSGW QKDYDEYGY Sbjct 65 GAWAEQTTRVEIGALVTCNSYRNPELLADMARTVDHISDGRLILGIGSGWFQKDYDEYGY 124 Query 128 RFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSF 187 FGTAG RLDDL AALPRI R GKLNP PTRDIPVLIGGGGE+KTLR VA++ADIWH F Sbjct 125 EFGTAGGRLDDLGAALPRIADRFGKLNPKPTRDIPVLIGGGGEKKTLRHVAQHADIWHYF 184 Query 188 TAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDG--GGL---IASAEALAGLGVTLLTV 242 +SY K +L HC+ VGR+P+ IE SAAVD GG+ + A+AL GVTL+TV Sbjct 185 VDEESYKRKVGILEEHCAAVGRDPSVIEHSAAVDSRDGGVEEALQKADALREAGVTLITV 244 Query 243 GCDGPDYDLSAAAALCRWRD 262 G GPDYDLS ALCRWRD Sbjct 245 GASGPDYDLSVLDALCRWRD 264 >gi|343928664|ref|ZP_08768109.1| hypothetical protein GOALK_120_00920 [Gordonia alkanivorans NBRC 16433] gi|343761413|dbj|GAA15035.1| hypothetical protein GOALK_120_00920 [Gordonia alkanivorans NBRC 16433] Length=263 Score = 395 bits (1015), Expect = 4e-108, Method: Compositional matrix adjust. Identities = 185/260 (72%), Positives = 214/260 (83%), Gaps = 4/260 (1%) Query 9 LPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLG 68 P+RIGVQ+QPQHAP Y +RDAVRR ED GVD+AF WDHF+PLYG P+G HFECWT+LG Sbjct 3 FPLRIGVQIQPQHAPEYGLIRDAVRRAEDAGVDVAFNWDHFYPLYGAPEGEHFECWTMLG 62 Query 69 AWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYR 128 AWAEQTS +EIGALVTCNSYRNPELLADMARTVDHISGGRLILG+G+GW QKDYDEYGY Sbjct 63 AWAEQTSRVEIGALVTCNSYRNPELLADMARTVDHISGGRLILGVGAGWFQKDYDEYGYE 122 Query 129 FGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFT 188 FGT GSRL+D AALPRIK+RLGKLNP PTRDIP+L+GG GE+KTLR +AE+AD WH F Sbjct 123 FGTVGSRLNDFGAALPRIKSRLGKLNPAPTRDIPILVGGSGEKKTLRYIAEHADAWHGFN 182 Query 189 AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG----LIASAEALAGLGVTLLTVGC 244 + Y KS VL+ HC+ VGR+P TIERS+AV G ++ A++LA G++LLTVG Sbjct 183 DVEQYRHKSKVLAEHCAAVGRDPETIERSSAVQFDGDVDAMLRGADSLADEGISLLTVGV 242 Query 245 DGPDYDLSAAAALCRWRDGR 264 GPDYDL+A ALCRWRD R Sbjct 243 TGPDYDLTAVEALCRWRDAR 262 >gi|326383869|ref|ZP_08205553.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Gordonia neofelifaecis NRRL B-59395] gi|326197328|gb|EGD54518.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Gordonia neofelifaecis NRRL B-59395] Length=264 Score = 378 bits (971), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 182/259 (71%), Positives = 206/259 (80%), Gaps = 4/259 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIGVQLQPQH+P Y +RDAV R ED GVDI F WDHFFPLYGD +G HFECWT+LGA Sbjct 4 PIRIGVQLQPQHSPDYSLIRDAVVRAEDSGVDIVFNWDHFFPLYGDAEGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTS +E+GALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGW Q+DY EYGY F Sbjct 64 WAEQTSRVELGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWFQRDYTEYGYDF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT GSRLDDL A+LPRI RL KLNP PTRDIP+LIGG GE+KTLR +A + DIWH+F Sbjct 124 GTKGSRLDDLGASLPRISQRLSKLNPQPTRDIPILIGGSGEKKTLRHIAAHGDIWHAFVD 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAV----DGGGLIASAEALAGLGVTLLTVGCD 245 +SY KS+VL+ HC+ VGR+PA IERSA V D ++ A+ + GVTLLTV Sbjct 184 VESYRHKSSVLAAHCADVGRDPAEIERSAEVRYDGDVDAMLRFADDITAEGVTLLTVATG 243 Query 246 GPDYDLSAAAALCRWRDGR 264 GPDYDL+A AL RWRD R Sbjct 244 GPDYDLTAVEALVRWRDAR 262 >gi|336320977|ref|YP_004600945.1| oxidoreductase [Cellvibrio gilvus ATCC 13127] gi|336104558|gb|AEI12377.1| oxidoreductase [Cellvibrio gilvus ATCC 13127] Length=270 Score = 355 bits (910), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 180/264 (69%), Positives = 200/264 (76%), Gaps = 3/264 (1%) Query 2 TSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHF 61 T + R PVRIGVQLQPQHA Y +RDAVRR ED+GVD+ F WDHFFPL GDPDG HF Sbjct 8 TYVRRMTFPVRIGVQLQPQHA-DYAQIRDAVRRAEDLGVDVIFNWDHFFPLSGDPDGKHF 66 Query 62 ECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKD 121 ECWT+L AWAEQT +EIGALVTCNSYRNPELLADMARTVDHISGGRLILGIG+GW +KD Sbjct 67 ECWTMLAAWAEQTERVEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGAGWFEKD 126 Query 122 YDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYA 181 YDE+GY FGTAGSR+ DLA ALPRIKAR NP PTR+IP+LIGGGGERKTLR+VAE+A Sbjct 127 YDEFGYEFGTAGSRIADLADALPRIKARWAASNPAPTREIPILIGGGGERKTLRVVAEHA 186 Query 182 DIWHSFTAGDSYLAKSAVLSTHCSTVGRNPAT-IERSAAVDGGGLIASAEALAGLGVTLL 240 WHSF + KSA+L H + VGR+ AT +ERS AV A A G TLL Sbjct 187 HAWHSFGDAPTLTRKSAILDEHGAAVGRDTATLVERSVAVSAPP-AEQAAAFLDAGATLL 245 Query 241 TVGCDGPDYDLSAAAALCRWRDGR 264 TVG GPDYDLS AA WRD + Sbjct 246 TVGTSGPDYDLSLAAQWVAWRDAQ 269 >gi|332670801|ref|YP_004453809.1| oxidoreductase [Cellulomonas fimi ATCC 484] gi|332339839|gb|AEE46422.1| oxidoreductase [Cellulomonas fimi ATCC 484] Length=258 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 177/255 (70%), Positives = 199/255 (79%), Gaps = 3/255 (1%) Query 11 VRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAW 70 +RIGVQ+QPQHA Y +RDAVRR ED GVDI F WDHFFPL GDPDG HFECWT+LGAW Sbjct 5 IRIGVQIQPQHA-DYAQIRDAVRRAEDAGVDIVFNWDHFFPLSGDPDGKHFECWTMLGAW 63 Query 71 AEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFG 130 AEQTS +EIGALVTCNSYRNPELLADMARTVDHISGGRL+LGIG+GW +KDYD++GY FG Sbjct 64 AEQTSRVEIGALVTCNSYRNPELLADMARTVDHISGGRLVLGIGAGWFEKDYDQFGYEFG 123 Query 131 TAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAG 190 TAGSR+ DLA ALPRIK RL NP PTRDIPVLIGGGGERKTLR+VAE+AD WHSF Sbjct 124 TAGSRIADLADALPRIKRRLAVANPAPTRDIPVLIGGGGERKTLRIVAEHADAWHSFGDV 183 Query 191 DSYLAKSAVLSTHCSTVGRNPAT-IERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 ++ KSA+L H S VGR+ A+ +ERS V G A+ L GVTL T+G DGPDY Sbjct 184 ETLRRKSAILDEHGSAVGRDTASLVERSIGV-GAPPEEVADELVQAGVTLFTIGVDGPDY 242 Query 250 DLSAAAALCRWRDGR 264 DLS WRD + Sbjct 243 DLSLVERWVAWRDAQ 257 >gi|226309397|ref|YP_002769357.1| hypothetical protein RER_59100 [Rhodococcus erythropolis PR4] gi|226188514|dbj|BAH36618.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=278 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 172/253 (68%), Positives = 194/253 (77%), Gaps = 3/253 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIGVQLQPQHAP Y +RDAV R ED GVDI F WDHF+PL GDPDG HFECWT+LGA Sbjct 18 PVRIGVQLQPQHAPDYGLIRDAVLRSEDAGVDIVFNWDHFYPLTGDPDGAHFECWTMLGA 77 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQT +EIGALVT YRNP+LLADMARTVDHISGGRLILGIG+GW +KDYD++GY F Sbjct 78 WAEQTERVEIGALVTGGGYRNPDLLADMARTVDHISGGRLILGIGAGWFEKDYDQFGYDF 137 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT GSRL L LPRI RL K NPPPTR+IPVLIGGGGE+KTLRLVAEYAD+WHSF Sbjct 138 GTPGSRLKLLGEYLPRITGRLAKGNPPPTRNIPVLIGGGGEKKTLRLVAEYADVWHSFGD 197 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 +++L KS +LS HC+ VGRNP +E S G + +A L GV+L TVG GPDY Sbjct 198 RETHLRKSGILSDHCADVGRNPLEVEHSVPWPG---LENAADLVADGVSLFTVGVSGPDY 254 Query 250 DLSAAAALCRWRD 262 DL+ A WRD Sbjct 255 DLTTLAEAIAWRD 267 >gi|296130079|ref|YP_003637329.1| oxidoreductase [Cellulomonas flavigena DSM 20109] gi|296021894|gb|ADG75130.1| oxidoreductase [Cellulomonas flavigena DSM 20109] Length=264 Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 170/253 (68%), Positives = 197/253 (78%), Gaps = 2/253 (0%) Query 11 VRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAW 70 VR+GVQ+QPQHA Y +RDAV R ED+GVD+ WDHFFPL GDPDG HFECWT+LGAW Sbjct 9 VRVGVQIQPQHA-DYAQIRDAVLRAEDLGVDVVLNWDHFFPLSGDPDGKHFECWTMLGAW 67 Query 71 AEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFG 130 AEQTS +EIGALV+CNSYRNPELLADMARTVDHISGGRLILGIG+GW ++DY EYGY FG Sbjct 68 AEQTSRVEIGALVSCNSYRNPELLADMARTVDHISGGRLILGIGAGWFERDYTEYGYEFG 127 Query 131 TAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAG 190 TAGSR+ DLA ALPRI+AR +NP PTRDIPV++GG GERK LR+VAE+AD+WHSF Sbjct 128 TAGSRIADLAQALPRIRARWAAMNPAPTRDIPVMVGGSGERKMLRIVAEHADVWHSFGDV 187 Query 191 DSYLAKSAVLSTHCSTVGRNPAT-IERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 ++ KSAVL H + VGR+ A+ + RS VDG +AL G LLT+G DGPDY Sbjct 188 ETLRRKSAVLDEHGAAVGRDTASLVTRSVGVDGADPREVGDALLDAGARLLTLGVDGPDY 247 Query 250 DLSAAAALCRWRD 262 DLS A RWRD Sbjct 248 DLSTVAQWVRWRD 260 >gi|257056770|ref|YP_003134602.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase [Saccharomonospora viridis DSM 43017] gi|256586642|gb|ACU97775.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase [Saccharomonospora viridis DSM 43017] Length=262 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 170/255 (67%), Positives = 195/255 (77%), Gaps = 2/255 (0%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIG+QLQPQHA Y +R AV E++GVDI F WDHF+PL GDP+G HFECWT+LGA Sbjct 8 PIRIGLQLQPQHA-DYDDIRRAVAEAEELGVDIVFNWDHFYPLSGDPEGKHFECWTMLGA 66 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAE TS +EIGALVTCNSYRNPELLADMARTVDHISGGRLILGIG+GW +KDY EYGY F Sbjct 67 WAETTSRVEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGAGWFEKDYVEYGYEF 126 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSR+ DL ALPRI+ R KLNPPPTR+IPVLIGGGGE+KTLRLVA++ADIWHS+ Sbjct 127 GTAGSRIADLGKALPRIEQRFAKLNPPPTREIPVLIGGGGEKKTLRLVAKHADIWHSWGD 186 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 + K +L HC+ VGR+PA IERS V G AS + LA LG+TL T+ GPDY Sbjct 187 VEVARRKVRILDQHCADVGRDPAEIERSIGVSGSP-SASGDQLAELGITLFTLSSSGPDY 245 Query 250 DLSAAAALCRWRDGR 264 D WRD R Sbjct 246 DFGPLREWLAWRDSR 260 >gi|296138376|ref|YP_003645619.1| hypothetical protein Tpau_0643 [Tsukamurella paurometabola DSM 20162] gi|296026510|gb|ADG77280.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=258 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 164/258 (64%), Positives = 193/258 (75%), Gaps = 4/258 (1%) Query 11 VRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAW 70 +RIGVQLQPQH Y+ +RDAV + E++GVD+ + WDHFFPL GDPDG H ECWT+L AW Sbjct 1 MRIGVQLQPQHFTEYQQLRDAVAKLEELGVDVVYNWDHFFPLSGDPDGTHLECWTMLAAW 60 Query 71 AEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFG 130 AEQTS +EIGALVTCNSYRNP+LLADMARTVDHIS GRLILGIGSGW Q+DYDEYGY FG Sbjct 61 AEQTSRVEIGALVTCNSYRNPDLLADMARTVDHISNGRLILGIGSGWFQRDYDEYGYEFG 120 Query 131 TAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAG 190 TAGSRLDDLA ALPRI R KLNP PTRDIP+LIGGGGE+KTL LVA+YA +WH F Sbjct 121 TAGSRLDDLATALPRITERWAKLNPKPTRDIPILIGGGGEKKTLPLVAQYASVWHYFVDL 180 Query 191 DSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG----LIASAEALAGLGVTLLTVGCDG 246 ++Y KSAVL+ C+ +GR+P I + A+ G IA A+ L G T T Sbjct 181 ETYRHKSAVLADACAKIGRDPKQIAHNVAIPRGSSVEEAIAFADVLVAEGATEFTAELAA 240 Query 247 PDYDLSAAAALCRWRDGR 264 P++D + AL RWRD + Sbjct 241 PEFDYTVIEALLRWRDAQ 258 >gi|300784229|ref|YP_003764520.1| hypothetical protein AMED_2321 [Amycolatopsis mediterranei U32] gi|299793743|gb|ADJ44118.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340525648|gb|AEK40853.1| hypothetical protein RAM_11815 [Amycolatopsis mediterranei S699] Length=259 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 170/252 (68%), Positives = 193/252 (77%), Gaps = 2/252 (0%) Query 11 VRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAW 70 +RIG+QLQPQHA Y ++R ED+G DI F WDHF+PLYGDP+G HFECWT+LGAW Sbjct 6 IRIGLQLQPQHA-DYDSIRRTASAAEDLGADIVFNWDHFYPLYGDPEGMHFECWTMLGAW 64 Query 71 AEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFG 130 AE TS +EIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGW +KDYDEYGY FG Sbjct 65 AESTSRVEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWFEKDYDEYGYEFG 124 Query 131 TAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAG 190 TAG RLDDLA +LPRI++RLGKLNP PTR IPVLIGGGGE+KTL+LVA++ADIWH F Sbjct 125 TAGGRLDDLAESLPRIESRLGKLNPAPTRKIPVLIGGGGEKKTLKLVAKHADIWHGFGDP 184 Query 191 DSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYD 250 + K +L HC+ VGR+PA IERS V G + L LGVT TVG GPDYD Sbjct 185 EVVGRKVKILDRHCADVGRDPAEIERSCGVQGEPDELGPKLLE-LGVTTFTVGVGGPDYD 243 Query 251 LSAAAALCRWRD 262 L A WR+ Sbjct 244 LGALEKWIAWRE 255 >gi|325677376|ref|ZP_08157041.1| MmcI protein [Rhodococcus equi ATCC 33707] gi|325551839|gb|EGD21536.1| MmcI protein [Rhodococcus equi ATCC 33707] Length=264 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 166/253 (66%), Positives = 188/253 (75%), Gaps = 3/253 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIG+QLQPQHAP Y +RDAV R ED G D+ F WDHF+PLYGD +G HFECWT+LGA Sbjct 4 PVRIGIQLQPQHAPDYGMIRDAVLRAEDAGADVVFNWDHFYPLYGDQEGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQT +EIGALV+C YRNP+LLADMARTVDHISGGRLILGIG+GW +KDYD YGY F Sbjct 64 WAEQTERVEIGALVSCAGYRNPDLLADMARTVDHISGGRLILGIGAGWFEKDYDAYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT GSR+ L LPRI +RLGKLNP PTR IP++IGG GE+KTLRLVAEYADIWH F Sbjct 124 GTPGSRIKLLGEYLPRITSRLGKLNPAPTRHIPLMIGGSGEKKTLRLVAEYADIWHGFGD 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 D ++ KSA+L HC V R+P IERS G + A A GVTL TV GPDY Sbjct 184 RDEFVRKSAILGEHCGDVQRDPHEIERSTWWHG---VDEAAAYVDAGVTLFTVNASGPDY 240 Query 250 DLSAAAALCRWRD 262 DL+A WRD Sbjct 241 DLTALREAVAWRD 253 >gi|312141963|ref|YP_004009299.1| hypothetical protein REQ_46810 [Rhodococcus equi 103S] gi|311891302|emb|CBH50623.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=264 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 166/253 (66%), Positives = 188/253 (75%), Gaps = 3/253 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIG+QLQPQHAP Y +RDAV R ED D+ F WDHF+PLYGD +G HFECWT+LGA Sbjct 4 PVRIGIQLQPQHAPDYGMIRDAVLRAEDACADVVFNWDHFYPLYGDQEGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQT +EIGALV+C YRNP+LLADMARTVDHISGGRLILGIG+GW +KDYD YGY F Sbjct 64 WAEQTERVEIGALVSCAGYRNPDLLADMARTVDHISGGRLILGIGAGWFEKDYDAYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT GSR+ L LPRI +RLGKLNP PTRDIP++IGG GE+KTLRLVAEYADIWH F Sbjct 124 GTPGSRIKLLGEYLPRITSRLGKLNPAPTRDIPLMIGGSGEKKTLRLVAEYADIWHGFGD 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 D ++ KSA+L HC V R+P IERS G + A A GVTL TV GPDY Sbjct 184 RDEFVRKSAILGEHCGDVQRDPHEIERSTWWHG---VDEAAAYVDAGVTLFTVNASGPDY 240 Query 250 DLSAAAALCRWRD 262 DL+A WRD Sbjct 241 DLTALREAVAWRD 253 >gi|333922201|ref|YP_004495782.1| hypothetical protein AS9A_4550 [Amycolicicoccus subflavus DQS3-9A1] gi|333484422|gb|AEF42982.1| hypothetical protein AS9A_4550 [Amycolicicoccus subflavus DQS3-9A1] Length=255 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 160/257 (63%), Positives = 192/257 (75%), Gaps = 3/257 (1%) Query 8 DLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVL 67 D P+RIGVQ+QPQHAP YR +RDAV R ED GVD+ F WDHFFPLYG+PDGPHFECWT+L Sbjct 2 DRPLRIGVQIQPQHAPDYRLIRDAVLRAEDAGVDVVFNWDHFFPLYGEPDGPHFECWTML 61 Query 68 GAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGY 127 GAWAEQT +E GALVTC +YRNP+LLADMARTVDH+SGGRLI GIGSGW ++D+DEYGY Sbjct 62 GAWAEQTERVEFGALVTCGAYRNPDLLADMARTVDHMSGGRLIFGIGSGWFERDFDEYGY 121 Query 128 RFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSF 187 FGT SRL+ L LPRI+ R KLNPPPTR++PVLIGGGG +KTLRLVA +ADIWHSF Sbjct 122 EFGTKVSRLNLLGEYLPRIEERWKKLNPPPTRNMPVLIGGGGVKKTLRLVARHADIWHSF 181 Query 188 TAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGP 247 +++ KS VL+ HC GR+ + IERS G +A A+ G + TV +GP Sbjct 182 GDLETFTYKSGVLAEHCGAEGRHSSEIERSIQFPG---VADADDFVAAGASFFTVPINGP 238 Query 248 DYDLSAAAALCRWRDGR 264 YD++ +WR R Sbjct 239 HYDMAPVIEAIKWRGSR 255 >gi|269956124|ref|YP_003325913.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Xylanimonas cellulosilytica DSM 15894] gi|269304805|gb|ACZ30355.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Xylanimonas cellulosilytica DSM 15894] Length=261 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 168/256 (66%), Positives = 198/256 (78%), Gaps = 3/256 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVR+ VQLQPQHA Y +RDAVRR ED+GVD+ WDHF+PL GDPDG H ECWT+LGA Sbjct 8 PVRVAVQLQPQHA-DYHQLRDAVRRAEDLGVDLVMNWDHFYPLSGDPDGKHLECWTMLGA 66 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQT +EIGALVTCNSYRNP+LLADMARTVDHISGGRL+LGIG+GW ++DYD++GY F Sbjct 67 WAEQTERVEIGALVTCNSYRNPDLLADMARTVDHISGGRLVLGIGAGWFRRDYDQFGYEF 126 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT G+R+ LAA LPRI+ARL NP PTRDIP+LIGGGGERKTLR+VAE+ADIWHSF+ Sbjct 127 GTPGTRIARLAADLPRIRARLAAGNPAPTRDIPILIGGGGERKTLRIVAEHADIWHSFSD 186 Query 190 GDSYLAKSAVLSTHCSTVGRNP-ATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPD 248 ++ KSA+L H + VGR+ A +ERS V G +A+AL G TLL VG GPD Sbjct 187 AETLARKSAILDEHGAAVGRDTVAAVERSVEVRGEPR-DTADALVAAGATLLIVGVSGPD 245 Query 249 YDLSAAAALCRWRDGR 264 YDL+ A WRD R Sbjct 246 YDLTDLAKWVAWRDAR 261 >gi|111020448|ref|YP_703420.1| 5,10-methylenetetrahydromethanopterin reductase [Rhodococcus jostii RHA1] gi|110819978|gb|ABG95262.1| probable 5,10-methylenetetrahydromethanopterin reductase [Rhodococcus jostii RHA1] Length=264 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 168/253 (67%), Positives = 190/253 (76%), Gaps = 3/253 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIGVQLQPQHAP Y +RDAV R ED GVDI F WDHF+PLYGDP G HFECWT+LGA Sbjct 4 PVRIGVQLQPQHAPDYGLIRDAVLRAEDAGVDIVFNWDHFYPLYGDPAGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 +AEQT +EIGALVTC YRNP+LLADMARTVDHISGGRLILGIGSGW ++DYDEYGY F Sbjct 64 FAEQTERVEIGALVTCAGYRNPDLLADMARTVDHISGGRLILGIGSGWFERDYDEYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSRL+ LA LPRI AR GKL P PTR IP+LIGGGGE+KTL LV +Y DIWHSF+ Sbjct 124 GTAGSRLNLLAEYLPRITARFGKLEPAPTRHIPILIGGGGEKKTLPLVGQYGDIWHSFSD 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 D+Y KS +L+ + GR+P +I+ S + G + A A GVTL TVG GPDY Sbjct 184 MDTYKRKSGILAGYARDAGRSPDSIQHSTSWPG---VDDAAAHVDAGVTLFTVGVGGPDY 240 Query 250 DLSAAAALCRWRD 262 DL WRD Sbjct 241 DLGTLKEAIAWRD 253 >gi|258650456|ref|YP_003199612.1| coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Nakamurella multipartita DSM 44233] gi|258553681|gb|ACV76623.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Nakamurella multipartita DSM 44233] Length=264 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 170/255 (67%), Positives = 190/255 (75%), Gaps = 2/255 (0%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 P+RIG+QLQPQHA Y +RDA+ R ED+GVDI F WDHFFPL GDPDG HFECWT+LGA Sbjct 6 PIRIGIQLQPQHA-DYAQLRDALLRAEDLGVDIVFNWDHFFPLTGDPDGKHFECWTMLGA 64 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQT +EIGALVT YRNP+LLADMARTVDHISGGRLI GIG GW +KDYDEYGY F Sbjct 65 WAEQTERVEIGALVTGGGYRNPDLLADMARTVDHISGGRLIFGIGGGWFEKDYDEYGYDF 124 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT GSRL L L RI AR +LNPPP R IPVLIGGGGERKTLR VA YA IWH+F Sbjct 125 GTPGSRLSLLGDGLARITARWERLNPPPVRPIPVLIGGGGERKTLRHVARYAHIWHAFGG 184 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 D+ K+A+L+ HC+ VGR+P IERS A G A+AL LGVTL T+G GPDY Sbjct 185 PDTQARKAAILAEHCAVVGRDPNEIERSTAAPRWG-SPDAQALLDLGVTLFTIGVSGPDY 243 Query 250 DLSAAAALCRWRDGR 264 DLS +WRD R Sbjct 244 DLSVIPEWVKWRDSR 258 >gi|229820279|ref|YP_002881805.1| oxidoreductase [Beutenbergia cavernae DSM 12333] gi|229566192|gb|ACQ80043.1| oxidoreductase [Beutenbergia cavernae DSM 12333] Length=256 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 167/257 (65%), Positives = 196/257 (77%), Gaps = 3/257 (1%) Query 9 LPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLG 68 + +RI VQ+QPQHA Y A+RDAVRR ED+GVDI F WDHFFPL GD DG HFECWT+LG Sbjct 1 MTLRIAVQIQPQHA-DYSAIRDAVRRSEDLGVDIIFNWDHFFPLRGDADGKHFECWTMLG 59 Query 69 AWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYR 128 AWAEQT +EIGALVTCNSYRNP+LLADMARTVDH+SGGRLILGIG+GW ++DYD++GY Sbjct 60 AWAEQTERVEIGALVTCNSYRNPDLLADMARTVDHMSGGRLILGIGAGWFERDYDDFGYE 119 Query 129 FGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFT 188 FGTAG+R+ DLA A+PRIKAR NP PTRDIP+LIGGGGE+KTLR+VAE+AD WHSF Sbjct 120 FGTAGARIADLAEAMPRIKARWAASNPTPTRDIPILIGGGGEKKTLRIVAEHADAWHSFG 179 Query 189 AGDSYLAKSAVLSTHCSTVGRNPAT-IERSAAVDGGGLIASAEALAGLGVTLLTVGCDGP 247 + KSA+L H + VGR+ AT +ERS V A A+ L G TL T+G GP Sbjct 180 DVTTLRRKSAILDEHGAAVGRDTATLVERSIGVSAPPE-AVAQPLVDAGATLFTIGASGP 238 Query 248 DYDLSAAAALCRWRDGR 264 DYDLS WRD + Sbjct 239 DYDLSLVEKWIAWRDAQ 255 >gi|88855268|ref|ZP_01129933.1| hypothetical protein A20C1_05281 [marine actinobacterium PHSC20C1] gi|88815796|gb|EAR25653.1| hypothetical protein A20C1_05281 [marine actinobacterium PHSC20C1] Length=260 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 157/255 (62%), Positives = 191/255 (75%), Gaps = 2/255 (0%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRI VQLQPQHA Y +RD VR E +GVD+ F WDHFFPLYG+PDG HFE WT L + Sbjct 6 PVRIAVQLQPQHA-EYSVIRDRVRELEQLGVDVLFNWDHFFPLYGEPDGLHFEAWTELAS 64 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAE TS +E G LV CNSYRNP+L ADMART+DHISGGR I G GSGW ++DY+EYGY F Sbjct 65 WAELTSRVEFGTLVNCNSYRNPDLQADMARTLDHISGGRFIFGTGSGWFERDYNEYGYEF 124 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAG+RLD LA ALPRI++R KLNP PTR IPVLIGGGGE+KTL+LVA++ADIWHSF Sbjct 125 GTAGTRLDALADALPRIESRWSKLNPAPTRKIPVLIGGGGEKKTLKLVAKHADIWHSFAT 184 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 GD+ + K +VL+ HC TVGR+ + IE S + + A+++ G+TL T+G GPDY Sbjct 185 GDALVHKLSVLAGHCETVGRDISEIELSNELRDKS-VEDADSMREQGITLFTLGITGPDY 243 Query 250 DLSAAAALCRWRDGR 264 DL++ WRD + Sbjct 244 DLTSTKQWLSWRDSQ 258 >gi|326332275|ref|ZP_08198555.1| putative F420-dependent oxidoreductase family protein [Nocardioidaceae bacterium Broad-1] gi|325949981|gb|EGD42041.1| putative F420-dependent oxidoreductase family protein [Nocardioidaceae bacterium Broad-1] Length=256 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 158/256 (62%), Positives = 191/256 (75%), Gaps = 4/256 (1%) Query 9 LPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLG 68 + +RIGVQ+QPQHA Y +R+A RR E+IGVD+ F WDHF+PLYG+PDG HFE WT+L Sbjct 1 MTIRIGVQIQPQHAD-YAQIREAARRAEEIGVDVIFNWDHFYPLYGEPDGKHFEAWTMLA 59 Query 69 AWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYR 128 AWAEQT+ +EIG LVTCNSYRNPELLADMARTVDHIS GRL+ GIGSGW ++DY EYGY Sbjct 60 AWAEQTTRVEIGCLVTCNSYRNPELLADMARTVDHISDGRLLFGIGSGWFERDYTEYGYD 119 Query 129 FGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFT 188 FGTAGSRLD L ALPRI+ R +LNP P R IPV+IGGGGE+KTL+ VA++ADIWHSF+ Sbjct 120 FGTAGSRLDALGEALPRIEKRWSELNPAPVRKIPVMIGGGGEKKTLKYVAKHADIWHSFS 179 Query 189 AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPD 248 + K +L+ HC VGR+ + IE S V + SA+ A G TL T G +GPD Sbjct 180 DIPTLERKHGILAEHCKNVGRDVSEIEISVEVSD---VESAKEFADAGATLFTHGVNGPD 236 Query 249 YDLSAAAALCRWRDGR 264 Y+LS L WRDG+ Sbjct 237 YELSFLEELVAWRDGQ 252 >gi|331696947|ref|YP_004333186.1| putative F420-dependent oxidoreductase [Pseudonocardia dioxanivorans CB1190] gi|326951636|gb|AEA25333.1| putative F420-dependent oxidoreductase, MSMEG_2906 family [Pseudonocardia dioxanivorans CB1190] Length=506 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 169/259 (66%), Positives = 192/259 (75%), Gaps = 4/259 (1%) Query 6 RPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWT 65 RP L R+GVQLQPQHA + R +RDAV E+ GVDI F WDHFFPL G DG HFECWT Sbjct 250 RPAL--RVGVQLQPQHADYGR-IRDAVAEAEEAGVDIVFNWDHFFPLRGAADGKHFECWT 306 Query 66 VLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEY 125 +LGAWAE TS +EIGALVTCN YRNPELLADMARTVDHISGGRLILGIG+GW ++D+DEY Sbjct 307 MLGAWAEATSRVEIGALVTCNGYRNPELLADMARTVDHISGGRLILGIGAGWFRRDFDEY 366 Query 126 GYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWH 185 GY FGTAGSRL LA ALPRI++R +LNPPPTRDIP+L+GGGGE+KTLR AEYADIWH Sbjct 367 GYDFGTAGSRLAGLADALPRIRSRWERLNPPPTRDIPILVGGGGEKKTLRCTAEYADIWH 426 Query 186 SFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCD 245 F ++ KS VL HC+ VGR+P +I RSA V A A+ L GV L T+G Sbjct 427 GFGDAETIAHKSRVLDAHCTDVGRDPRSIVRSAGVQAAP-DAVADDLLAAGVGLFTIGVG 485 Query 246 GPDYDLSAAAALCRWRDGR 264 GP YDL WRD R Sbjct 486 GPRYDLGLLKDWIAWRDER 504 >gi|324999834|ref|ZP_08120946.1| hypothetical protein PseP1_13746 [Pseudonocardia sp. P1] Length=261 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 169/256 (67%), Positives = 188/256 (74%), Gaps = 3/256 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIG+QLQPQHA Y +R V E+ G D+ F WDHFFPLYG+PDG HFECWT+LGA Sbjct 6 PVRIGLQLQPQHA-DYSEIRRTVAAAEEAGADVVFNWDHFFPLYGEPDGKHFECWTMLGA 64 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAE TS IEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIG+GW Q+DYDEYGY F Sbjct 65 WAEATSRIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGAGWFQRDYDEYGYEF 124 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAG RL DLA ALPRI+ R LNP PTRDIPVL+GGGGE+KTLR AE+A IWH F Sbjct 125 GTAGGRLRDLAQALPRIRDRWAALNPAPTRDIPVLVGGGGEKKTLRYTAEHATIWHGFGD 184 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGP-D 248 ++ K +VL HC +GR+PA IERS AV+G S L GV L TVG DG Sbjct 185 AETVAHKCSVLDGHCRDLGRDPAEIERSCAVEGSPE-ESGPGLYDAGVRLFTVGQDGQGG 243 Query 249 YDLSAAAALCRWRDGR 264 YDL+ WRD R Sbjct 244 YDLARLKDWIAWRDER 259 >gi|334336843|ref|YP_004541995.1| F420-dependent oxidoreductase, MSMEG_2906 family [Isoptericola variabilis 225] gi|334107211|gb|AEG44101.1| putative F420-dependent oxidoreductase, MSMEG_2906 family [Isoptericola variabilis 225] Length=261 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/262 (63%), Positives = 195/262 (75%), Gaps = 3/262 (1%) Query 4 LVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFEC 63 + P P+RI VQL PQHA Y +RDAV R ED+GVD F WDHFFPL GD +G HFEC Sbjct 1 MTSPPRPLRIAVQLHPQHA-EYADIRDAVLRAEDLGVDAVFNWDHFFPLRGDENGKHFEC 59 Query 64 WTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYD 123 WT+LGAWAEQT +EIGALVT N YRNP+LLADMARTVDHISGGRLILGIG+GW +KDY+ Sbjct 60 WTMLGAWAEQTERVEIGALVTGNGYRNPDLLADMARTVDHISGGRLILGIGAGWNRKDYE 119 Query 124 EYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADI 183 E+GY FGTAGSR+ LAAA+PRI+ARL NP PTR IP+L+GGGGE+KTLR+VAE+ADI Sbjct 120 EFGYEFGTAGSRIAALAAAMPRIRARLAAGNPSPTRHIPILLGGGGEKKTLRVVAEHADI 179 Query 184 WHSFTAGDSYLAKSAVLSTHCSTVGRNPAT-IERSAAVDGGGLIASAEALAGLGVTLLTV 242 WHSF + KSA+L H + VGR+ A +ERS V G +A+ G TLLT+ Sbjct 180 WHSFGDPEVLRRKSAILDQHGAAVGRDTARLVERSVEVTGPP-SEVGDAITAAGATLLTL 238 Query 243 GCDGPDYDLSAAAALCRWRDGR 264 G +GPDYDL+ A WRD R Sbjct 239 GMNGPDYDLTLAKEWVAWRDDR 260 >gi|284031593|ref|YP_003381524.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Kribbella flavida DSM 17836] gi|283810886|gb|ADB32725.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein [Kribbella flavida DSM 17836] Length=271 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 158/254 (63%), Positives = 184/254 (73%), Gaps = 1/254 (0%) Query 9 LPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLG 68 PVRIGVQ+QPQHA Y +R AV E++GVD+AF WDHF+PL G+P+G HFE WT+L Sbjct 14 FPVRIGVQIQPQHA-QYADIRRAVAAVEELGVDVAFNWDHFYPLSGEPEGLHFEAWTMLA 72 Query 69 AWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYR 128 AWAE T IE GALVTCNSYRNP+LLADMARTVDHIS GRLI GIGSGW +KDYDEYGY Sbjct 73 AWAEATERIEFGALVTCNSYRNPDLLADMARTVDHISDGRLIFGIGSGWFEKDYDEYGYE 132 Query 129 FGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFT 188 FGTAG RLD L ALPRI+ R +LNP PTRDIPVLIGGGGE+KTL+LVA++A+IWH F Sbjct 133 FGTAGGRLDALGEALPRIERRWARLNPRPTRDIPVLIGGGGEKKTLKLVAQHANIWHGFG 192 Query 189 AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPD 248 ++ K VL HC T+GR+P IERSA V ++L +G L T+ GPD Sbjct 193 DAETIAHKHEVLDGHCRTIGRDPGEIERSAGVGDKSPEEVGKSLLDVGTRLFTISTSGPD 252 Query 249 YDLSAAAALCRWRD 262 YDL WRD Sbjct 253 YDLGLVREWVAWRD 266 >gi|152966846|ref|YP_001362630.1| hypothetical protein Krad_2902 [Kineococcus radiotolerans SRS30216] gi|151361363|gb|ABS04366.1| conserved hypothetical protein [Kineococcus radiotolerans SRS30216] Length=267 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/260 (63%), Positives = 195/260 (75%), Gaps = 6/260 (2%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIG+Q+QPQHA Y A+R A R E++G DIAF WDHF+PLYGDP+G HFE WT+L A Sbjct 7 PVRIGIQIQPQHA-QYPAIRAAAARAEEMGADIAFNWDHFYPLYGDPEGLHFEAWTMLAA 65 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISG-----GRLILGIGSGWKQKDYDE 124 WAE TS IEIGALV+CNSYRNPELLADMARTVDH+S GRL+LGIGSGW +KDYDE Sbjct 66 WAEATSRIEIGALVSCNSYRNPELLADMARTVDHVSAHDTGTGRLVLGIGSGWFEKDYDE 125 Query 125 YGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIW 184 YGY FGTAG RL+ L LPRI++RL KLNP PTR IPVLIGGGGE+KTLR+VA++ADIW Sbjct 126 YGYEFGTAGGRLNKLRDDLPRIESRLAKLNPAPTRHIPVLIGGGGEQKTLRIVAKHADIW 185 Query 185 HSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGC 244 HSF +++ KS +L C+ +GR+P IERS ++ +A+AL G L TVG Sbjct 186 HSFGDVETFTRKSGILDERCAEIGRDPLEIERSVGIEPKDGTETADALHAAGGRLFTVGV 245 Query 245 DGPDYDLSAAAALCRWRDGR 264 GPDYD+ A + WRD + Sbjct 246 GGPDYDMGFLADVIAWRDAK 265 >gi|317508040|ref|ZP_07965728.1| oxidoreductase [Segniliparus rugosus ATCC BAA-974] gi|316253666|gb|EFV13048.1| oxidoreductase [Segniliparus rugosus ATCC BAA-974] Length=272 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 159/264 (61%), Positives = 189/264 (72%), Gaps = 12/264 (4%) Query 11 VRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHF-ECWTVLGA 69 +R+GVQLQ QHA YRA+R+AV R ED GVDI F WDHF+PL+GDPDG HF + WT+L A Sbjct 6 IRVGVQLQQQHAHDYRAIREAVSRAEDTGVDIIFNWDHFYPLHGDPDGTHFGDGWTLLAA 65 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 WAEQTSH+E+G LVTC YRNP+LLAD+ARTVDHISGGR+ LG+G+GW QKDYDEYGY F Sbjct 66 WAEQTSHVELGVLVTCLGYRNPDLLADIARTVDHISGGRVTLGVGAGWFQKDYDEYGYEF 125 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 G GSRL + L R+KARL +LNPPP D+P+LIGG GERKTLR VA++ADIWHSF Sbjct 126 GAPGSRLGLFSENLERVKARLARLNPPPRHDMPILIGGSGERKTLREVAKHADIWHSFLP 185 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGG-----LIASAEA------LAGLGVT 238 +L K+A+L H + VGR+ A IERS G G +A +EA GVT Sbjct 186 LPEFLRKNALLEEHGAAVGRDTAQIERSMNWPGSGSTVIEAVAPSEAPGVADDFLKAGVT 245 Query 239 LLTVGCDGPDYDLSAAAALCRWRD 262 L TVG GPDYD + RWRD Sbjct 246 LFTVGASGPDYDFATLREAIRWRD 269 >gi|319948247|ref|ZP_08022401.1| MmcI protein [Dietzia cinnamea P4] gi|319438079|gb|EFV93045.1| MmcI protein [Dietzia cinnamea P4] Length=229 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 150/229 (66%), Positives = 173/229 (76%), Gaps = 4/229 (1%) Query 40 VDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMAR 99 +D+ F WDHFFPLYGDPDG HFECWT+L AWAEQT +EIGALVTCN+YRNP+LLADMAR Sbjct 1 MDVVFNWDHFFPLYGDPDGAHFECWTMLAAWAEQTERVEIGALVTCNTYRNPDLLADMAR 60 Query 100 TVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTR 159 TVDHISGGRLILG+GSGW ++DY EYGY FGT GSRLDDL +L RI+ R L P PTR Sbjct 61 TVDHISGGRLILGLGSGWFERDYAEYGYEFGTKGSRLDDLGHSLERIEQRFATLTPAPTR 120 Query 160 DIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAA 219 DIPVL+GGGGE+KTLR VA +ADIWHSF ++Y KS VL+ HC+ VGR+P IERS Sbjct 121 DIPVLLGGGGEKKTLRHVARHADIWHSFVDVETYRHKSEVLAGHCADVGRDPGEIERSTE 180 Query 220 VDGGGLIASAEALA----GLGVTLLTVGCDGPDYDLSAAAALCRWRDGR 264 + G A+ LA GVTL TVG +GPDY L +L WRDGR Sbjct 181 IGGASSPDEAKRLAEDLHAEGVTLFTVGLNGPDYPLDLVESLVAWRDGR 229 >gi|336119675|ref|YP_004574452.1| hypothetical protein MLP_40350 [Microlunatus phosphovorus NM-1] gi|334687464|dbj|BAK37049.1| hypothetical protein MLP_40350 [Microlunatus phosphovorus NM-1] Length=276 Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 160/267 (60%), Positives = 181/267 (68%), Gaps = 6/267 (2%) Query 2 TSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHF 61 T+ P PVR+ VQ+ PQHA Y +R E +GVD F WDHFFPL G+PDG HF Sbjct 9 TTRSAPRRPVRLAVQIAPQHAA-YEQIRQTAAELEAMGVDALFNWDHFFPLSGEPDGLHF 67 Query 62 ECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISG----GRLILGIGSGW 117 E WT+L A AEQTS +EIGALV CNSYRNP L ADMART+DHIS GR I IGSGW Sbjct 68 ESWTMLAALAEQTSRVEIGALVNCNSYRNPNLQADMARTIDHISAKGGRGRFIFAIGSGW 127 Query 118 KQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLV 177 Q+DYDEYGY FGTAGSRLD LA LP IK R +LNPPPTR IPVLIGGGGE+KTLR+V Sbjct 128 FQRDYDEYGYEFGTAGSRLDSLADNLPIIKQRWTQLNPPPTRKIPVLIGGGGEKKTLRIV 187 Query 178 AEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGV 237 A++ADIWHSF + K VL+ H VGR+ A IE S V + A+ L LG Sbjct 188 AKHADIWHSFGDAATLERKLGVLADHGQAVGRDVAEIEISTDV-SRHTVDVADQLHALGA 246 Query 238 TLLTVGCDGPDYDLSAAAALCRWRDGR 264 TL TVG GPDYDLSA RWRD + Sbjct 247 TLFTVGISGPDYDLSAVREWLRWRDEK 273 >gi|226362667|ref|YP_002780445.1| hypothetical protein ROP_32530 [Rhodococcus opacus B4] gi|226241152|dbj|BAH51500.1| hypothetical protein [Rhodococcus opacus B4] Length=264 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 166/253 (66%), Positives = 188/253 (75%), Gaps = 3/253 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIGVQLQPQHAP Y +RDAV R ED GVDI F WDHF+PLYGDP G HFECWT+LGA Sbjct 4 PVRIGVQLQPQHAPEYGLIRDAVLRAEDAGVDIVFNWDHFYPLYGDPAGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 +AEQT +EIGALVTC YRNP+LLADMARTVDHISGGRLILGIG GW ++DYDEYGY F Sbjct 64 FAEQTERVEIGALVTCAGYRNPDLLADMARTVDHISGGRLILGIGGGWFERDYDEYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GTAGSRL+ L LPRI AR GKL P PTR IP+LIGGGGE+KTL LV +Y DIWHSF+ Sbjct 124 GTAGSRLNLLGEYLPRIIARFGKLEPAPTRHIPILIGGGGEKKTLPLVGKYGDIWHSFSD 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 D+Y KS +L+ + GR+P +I+ S + G A A GVTL TVG GPDY Sbjct 184 MDTYKRKSGLLAGYAHDAGRSPDSIQHSTSWPG---ADDAAAHVDAGVTLFTVGVGGPDY 240 Query 250 DLSAAAALCRWRD 262 DL+ WRD Sbjct 241 DLTTLKEAIAWRD 253 >gi|269794474|ref|YP_003313929.1| F420-dependent methylene-tetrahydromethanopterin reductase [Sanguibacter keddieii DSM 10542] gi|269096659|gb|ACZ21095.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase [Sanguibacter keddieii DSM 10542] Length=280 Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 150/258 (59%), Positives = 178/258 (69%), Gaps = 6/258 (2%) Query 11 VRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAW 70 VRIGVQ+ PQHA Y +R+ ED+GVDI F WDHF+PL G+PDG HFE WT+L A Sbjct 19 VRIGVQIAPQHAS-YEKIRETAAALEDLGVDILFNWDHFYPLSGEPDGLHFESWTMLAAL 77 Query 71 AEQTSHIEIGALVTCNSYRNPELLADMARTVDHISG----GRLILGIGSGWKQKDYDEYG 126 AEQTS +EIGALV CNSYRN L ADMART+DHIS GR I G GSGW ++DYDEYG Sbjct 78 AEQTSRVEIGALVNCNSYRNANLQADMARTIDHISAKGGQGRFIFGTGSGWFERDYDEYG 137 Query 127 YRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHS 186 Y FGT G+RLD LA LP I+ R GKLNP PTR IPVLIGGGGE+KTLR+VA++ADIWHS Sbjct 138 YEFGTVGTRLDALARDLPTIEDRWGKLNPAPTRKIPVLIGGGGEKKTLRIVAQHADIWHS 197 Query 187 FTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDG 246 F+ ++ K +L+ H VGR+ IE S + G + E LG TL T+G G Sbjct 198 FSDAETLERKLGILAEHARVVGRDVTEIEISTEI-GKRSVEEVEQQHALGATLFTIGISG 256 Query 247 PDYDLSAAAALCRWRDGR 264 PDYD+S A WRD + Sbjct 257 PDYDISGVADWLAWRDAK 274 >gi|317507402|ref|ZP_07965136.1| oxidoreductase [Segniliparus rugosus ATCC BAA-974] gi|316254287|gb|EFV13623.1| oxidoreductase [Segniliparus rugosus ATCC BAA-974] Length=263 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 148/251 (59%), Positives = 182/251 (73%), Gaps = 3/251 (1%) Query 12 RIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWA 71 R+G+ + Q AP+Y+A+RD R E++G D+ F DHFFP GDP G HFECW++L AWA Sbjct 9 RVGLLVSQQRAPNYQALRDVAARAEELGADVLFNTDHFFPWSGDPTGAHFECWSMLAAWA 68 Query 72 EQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGT 131 EQT +E+GALVT YRNP+LLADMARTVDHISGGRLILG+G+GW ++DY EY Y FGT Sbjct 69 EQTDRVELGALVTGAGYRNPDLLADMARTVDHISGGRLILGLGAGWLERDYVEYRYEFGT 128 Query 132 AGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAGD 191 AGSR+D LA +L RIKARLG+LNPPP +P+LIGGGGERK LR+VAE+ADIWHSF+A Sbjct 129 AGSRIDLLAESLARIKARLGRLNPPPVGKLPILIGGGGERKMLRIVAEHADIWHSFSAVA 188 Query 192 SYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDL 251 KSAVL+ HC+ VGR+PA I R+A+ G L + L G L+ PDYDL Sbjct 189 QLRHKSAVLAEHCAAVGRDPAEIVRAASWSGPELT---DELVAAGAGLILCDTSAPDYDL 245 Query 252 SAAAALCRWRD 262 +A WRD Sbjct 246 TALGHALAWRD 256 >gi|54027512|ref|YP_121754.1| hypothetical protein nfa55380 [Nocardia farcinica IFM 10152] gi|54019020|dbj|BAD60390.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=264 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 167/253 (67%), Positives = 187/253 (74%), Gaps = 3/253 (1%) Query 10 PVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGA 69 PVRIGVQLQPQHAP Y +RDAV R ED GVDI F WDHF+PL GDPDG HFECWT+LGA Sbjct 4 PVRIGVQLQPQHAPDYGRIRDAVLRAEDAGVDIVFNWDHFYPLTGDPDGAHFECWTMLGA 63 Query 70 WAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRF 129 +AEQT +EIGALVT YRNP+LLADMARTVDHISGGRLILGIG GW QKDY EYGY F Sbjct 64 FAEQTERVEIGALVTGGGYRNPDLLADMARTVDHISGGRLILGIGGGWFQKDYTEYGYEF 123 Query 130 GTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTA 189 GT G+RL+ L + RI ARL LNP P RDIP+LIGGGGERKTLRLVAEYADIWHSF+ Sbjct 124 GTPGTRLNLLKQNMERITARLRALNPAPLRDIPILIGGGGERKTLRLVAEYADIWHSFSD 183 Query 190 GDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDY 249 D+ K+ +L+ H + G + A IERS G + A A GV+L T+G GPDY Sbjct 184 LDTLARKNKILADHAAAAGTDAARIERSVQWPG---LDQAPAYLAAGVSLFTIGTSGPDY 240 Query 250 DLSAAAALCRWRD 262 DLS RWRD Sbjct 241 DLSEVDTALRWRD 253 Lambda K H 0.321 0.139 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 397943428394 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40