BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0051 Length=560 Score E Sequences producing significant alignments: (Bits) Value gi|15607193|ref|NP_214565.1| transmembrane protein [Mycobacteriu... 1115 0.0 gi|298527449|ref|ZP_07014858.1| conserved transmembrane protein ... 1113 0.0 gi|306805833|ref|ZP_07442501.1| conserved membrane protein [Myco... 1112 0.0 gi|289764165|ref|ZP_06523543.1| conserved hypothetical protein [... 1104 0.0 gi|15839428|ref|NP_334465.1| hypothetical protein MT0057 [Mycoba... 1087 0.0 gi|339293127|gb|AEJ45238.1| transmembrane protein [Mycobacterium... 1062 0.0 gi|167970577|ref|ZP_02552854.1| conserved transmembrane protein ... 1041 0.0 gi|118467279|ref|YP_879372.1| hypothetical protein MAV_0072 [Myc... 879 0.0 gi|296167069|ref|ZP_06849480.1| transmembrane protein [Mycobacte... 851 0.0 gi|342860219|ref|ZP_08716871.1| hypothetical protein MCOL_15120 ... 847 0.0 gi|41406163|ref|NP_958999.1| hypothetical protein MAP0065 [Mycob... 842 0.0 gi|240168781|ref|ZP_04747440.1| hypothetical protein MkanA1_0568... 834 0.0 gi|118615981|ref|YP_904313.1| hypothetical protein MUL_0069 [Myc... 834 0.0 gi|183980105|ref|YP_001848396.1| hypothetical protein MMAR_0070 ... 821 0.0 gi|254818595|ref|ZP_05223596.1| hypothetical protein MintA_01664... 795 0.0 gi|15828451|ref|NP_302714.1| hypothetical protein ML2687 [Mycoba... 784 0.0 gi|108802330|ref|YP_642527.1| hypothetical protein Mmcs_5371 [My... 774 0.0 gi|118474015|ref|YP_891099.1| hypothetical protein MSMEG_6899 [M... 744 0.0 gi|6708175|gb|AAF25828.1|AF187306_1 putative transmembrane prote... 742 0.0 gi|315446782|ref|YP_004079661.1| integral membrane protein [Myco... 741 0.0 gi|145221466|ref|YP_001132144.1| hypothetical protein Mflv_0872 ... 740 0.0 gi|169631973|ref|YP_001705622.1| hypothetical protein MAB_4900c ... 731 0.0 gi|333992949|ref|YP_004525563.1| transmembrane protein [Mycobact... 724 0.0 gi|120406965|ref|YP_956794.1| hypothetical protein Mvan_6035 [My... 717 0.0 gi|886306|gb|AAB53122.1| L222-ORF5; putative [Mycobacterium leprae] 588 7e-166 gi|229489893|ref|ZP_04383748.1| putative membrane protein [Rhodo... 575 6e-162 gi|226309324|ref|YP_002769284.1| hypothetical protein RER_58370 ... 574 2e-161 gi|54027532|ref|YP_121774.1| hypothetical protein nfa55580 [Noca... 570 2e-160 gi|226362647|ref|YP_002780425.1| hypothetical protein ROP_32330 ... 559 4e-157 gi|312141937|ref|YP_004009273.1| integral membrane protein [Rhod... 555 7e-156 gi|111020429|ref|YP_703401.1| hypothetical protein RHA1_ro03440 ... 554 2e-155 gi|325672808|ref|ZP_08152502.1| transmembrane protein [Rhodococc... 553 3e-155 gi|333922192|ref|YP_004495773.1| hypothetical protein AS9A_4541 ... 551 1e-154 gi|134103775|ref|YP_001109436.1| hypothetical protein SACE_7355 ... 479 4e-133 gi|291007698|ref|ZP_06565671.1| hypothetical protein SeryN2_2450... 478 1e-132 gi|296141856|ref|YP_003649099.1| hypothetical protein Tpau_4191 ... 465 9e-129 gi|257057872|ref|YP_003135704.1| putative integral membrane prot... 456 7e-126 gi|256381013|ref|YP_003104673.1| integral membrane protein [Acti... 453 3e-125 gi|262204548|ref|YP_003275756.1| integral membrane protein-like ... 453 3e-125 gi|343928606|ref|ZP_08768051.1| hypothetical protein GOALK_120_0... 436 6e-120 gi|300791090|ref|YP_003771381.1| hypothetical protein AMED_9291 ... 431 2e-118 gi|340532789|gb|AEK47994.1| hypothetical protein RAM_47645 [Amyc... 429 7e-118 gi|319949384|ref|ZP_08023452.1| hypothetical protein ES5_08121 [... 412 7e-113 gi|331700362|ref|YP_004336601.1| integral membrane protein [Pseu... 412 7e-113 gi|302531293|ref|ZP_07283635.1| LOW QUALITY PROTEIN: conserved h... 387 2e-105 gi|25029379|ref|NP_739433.1| hypothetical protein CE2823 [Coryne... 361 2e-97 gi|259508440|ref|ZP_05751340.1| membrane protein [Corynebacteriu... 360 5e-97 gi|325000756|ref|ZP_08121868.1| hypothetical protein PseP1_18402... 343 7e-92 gi|337291872|ref|YP_004630893.1| hypothetical protein CULC22_022... 339 8e-91 gi|334697843|gb|AEG82640.1| putative membrane protein [Corynebac... 337 5e-90 >gi|15607193|ref|NP_214565.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|31791228|ref|NP_853721.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|121635961|ref|YP_976184.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 65 more sequence titles Length=560 Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 559/560 (99%), Positives = 560/560 (100%), Gaps = 0/560 (0%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +TGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT Sbjct 1 MTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE Sbjct 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK Sbjct 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF Sbjct 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART Sbjct 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW Sbjct 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL Sbjct 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC Sbjct 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH Sbjct 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 Query 541 ARERTPDAGRDRTFSGQHRA 560 ARERTPDAGRDRTFSGQHRA Sbjct 541 ARERTPDAGRDRTFSGQHRA 560 >gi|298527449|ref|ZP_07014858.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A] gi|298497243|gb|EFI32537.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A] Length=560 Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/560 (99%), Positives = 559/560 (99%), Gaps = 0/560 (0%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +TGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT Sbjct 1 MTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE Sbjct 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK Sbjct 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF Sbjct 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART Sbjct 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSF GWRGFDPTLGFW Sbjct 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFIGWRGFDPTLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL Sbjct 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC Sbjct 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH Sbjct 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 Query 541 ARERTPDAGRDRTFSGQHRA 560 ARERTPDAGRDRTFSGQHRA Sbjct 541 ARERTPDAGRDRTFSGQHRA 560 >gi|306805833|ref|ZP_07442501.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|306970230|ref|ZP_07482891.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308347722|gb|EFP36573.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308352346|gb|EFP41197.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] Length=560 Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/560 (99%), Positives = 559/560 (99%), Gaps = 0/560 (0%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +TGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT Sbjct 1 MTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE Sbjct 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK Sbjct 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRR WDAALVAASPLVIFQIFTNF Sbjct 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRTWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART Sbjct 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW Sbjct 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL Sbjct 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC Sbjct 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH Sbjct 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 Query 541 ARERTPDAGRDRTFSGQHRA 560 ARERTPDAGRDRTFSGQHRA Sbjct 541 ARERTPDAGRDRTFSGQHRA 560 >gi|289764165|ref|ZP_06523543.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711671|gb|EFD75687.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=560 Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/560 (99%), Positives = 556/560 (99%), Gaps = 0/560 (0%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +TGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT Sbjct 1 MTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE Sbjct 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK Sbjct 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF Sbjct 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART Sbjct 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW Sbjct 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL Sbjct 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC Sbjct 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH Sbjct 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 Query 541 ARERTPDAGRDRTFSGQHRA 560 ARERTPDAG FSGQHRA Sbjct 541 ARERTPDAGPRSHFSGQHRA 560 >gi|15839428|ref|NP_334465.1| hypothetical protein MT0057 [Mycobacterium tuberculosis CDC1551] gi|13879100|gb|AAK44279.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=545 Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/545 (99%), Positives = 545/545 (100%), Gaps = 0/545 (0%) Query 16 LAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLAL 75 +AADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLAL Sbjct 1 MAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLAL 60 Query 76 GWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIE 135 GWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIE Sbjct 61 GWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIE 120 Query 136 TDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFN 195 TDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFN Sbjct 121 TDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFN 180 Query 196 VAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAW 255 VAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAW Sbjct 181 VAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAW 240 Query 256 ARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPV 315 ARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPV Sbjct 241 ARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPV 300 Query 316 MLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFV 375 MLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFV Sbjct 301 MLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFV 360 Query 376 LCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILL 435 LCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILL Sbjct 361 LCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILL 420 Query 436 AWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLV 495 AWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLV Sbjct 421 AWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLV 480 Query 496 RTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARERTPDAGRDRTFS 555 RTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARERTPDAGRDRTFS Sbjct 481 RTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARERTPDAGRDRTFS 540 Query 556 GQHRA 560 GQHRA Sbjct 541 GQHRA 545 >gi|339293127|gb|AEJ45238.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] Length=605 Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/560 (97%), Positives = 541/560 (97%), Gaps = 1/560 (0%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +TGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT Sbjct 1 MTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE Sbjct 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK Sbjct 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF Sbjct 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART Sbjct 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW Sbjct 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL Sbjct 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC Sbjct 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRP G Sbjct 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPPAGRRA 540 Query 541 -ARERTPDAGRDRTFSGQHR 559 ARE R F R Sbjct 541 CAREDARCRSRSHFFRATPR 560 >gi|167970577|ref|ZP_02552854.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] Length=525 Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/521 (100%), Positives = 521/521 (100%), Gaps = 0/521 (0%) Query 40 ANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANW 99 ANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANW Sbjct 5 ANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANW 64 Query 100 DNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPV 159 DNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPV Sbjct 65 DNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPV 124 Query 160 LTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRR 219 LTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRR Sbjct 125 LTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRR 184 Query 220 IWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLL 279 IWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLL Sbjct 185 IWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLL 244 Query 280 FLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDS 339 FLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDS Sbjct 245 FLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDS 304 Query 340 LYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTF 399 LYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTF Sbjct 305 LYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTF 364 Query 400 LTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRS 459 LTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRS Sbjct 365 LTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRS 424 Query 460 LPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFAN 519 LPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFAN Sbjct 425 LPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFAN 484 Query 520 AADAPPGRLPSWLRPRLGDEHARERTPDAGRDRTFSGQHRA 560 AADAPPGRLPSWLRPRLGDEHARERTPDAGRDRTFSGQHRA Sbjct 485 AADAPPGRLPSWLRPRLGDEHARERTPDAGRDRTFSGQHRA 525 >gi|118467279|ref|YP_879372.1| hypothetical protein MAV_0072 [Mycobacterium avium 104] gi|254773118|ref|ZP_05214634.1| hypothetical protein MaviaA2_00331 [Mycobacterium avium subsp. avium ATCC 25291] gi|118168566|gb|ABK69463.1| conserved hypothetical protein [Mycobacterium avium 104] Length=545 Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/547 (81%), Positives = 474/547 (87%), Gaps = 9/547 (1%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +TGA S+ ISP PLAAD RSADNRDCPSR D LGAA A V+GGPVGRHALIGR R+MT Sbjct 1 MTGAAEPSTTISPGPLAADRRSADNRDCPSRNDFLGAAFAEVIGGPVGRHALIGRARIMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMF IALVFLALGWSTKAACLQSTGTG GDQRVANWDNQRAYY+LCYSDTVPLYGAE Sbjct 61 PLRVMFLIALVFLALGWSTKAACLQSTGTGTGDQRVANWDNQRAYYELCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDS G Q+RYDGQ AVRYMEYPVLTG+YQY+SMA+AKTYTALSK Sbjct 121 LLSQGKFPYKSSWIETDSTGAQQIRYDGQPAVRYMEYPVLTGMYQYVSMALAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 +APLPVVAEVVMFFN+AAFGLALAWL TVWA++GLAGRRIWDAALVA SPL+IFQIFTNF Sbjct 181 LAPLPVVAEVVMFFNIAAFGLALAWLATVWASAGLAGRRIWDAALVAGSPLLIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALAT A +GLLAWARRRPVLAGVLIGLG+AAKLYPLLFL P+L+LGIR GRL A ART Sbjct 241 DALATAFAMAGLLAWARRRPVLAGVLIGLGAAAKLYPLLFLGPMLVLGIRTGRLGAWART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 A ATWLLVNLPV++ FPRGWSEFFRLNTRR +DMDSLYNVVKSFTGWRGFDP LGFW Sbjct 301 AVVAVATWLLVNLPVLVFFPRGWSEFFRLNTRRAEDMDSLYNVVKSFTGWRGFDPKLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 +PP VLNTVV +LFV CCAAIA+IALTAP RPR AQL FL VA+FLL NKVWSPQFSLWL Sbjct 361 QPPTVLNTVVAVLFVTCCAAIAFIALTAPRRPRAAQLVFLVVAAFLLTNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRR+LLAWMT+DALVWVPRMYYLYGNP+RSLPEQ FTTTVLLRDIAV+ LC Sbjct 421 VPLAVLALPHRRVLLAWMTVDALVWVPRMYYLYGNPNRSLPEQVFTTTVLLRDIAVITLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 LV+ QIYRP DLVR G G VDDP GG F A DAPPG LP WLRP G Sbjct 481 ALVIRQIYRPDEDLVRWG--------GRVDDPAGGPFNRAPDAPPGWLPDWLRPA-GSRR 531 Query 541 ARERTPD 547 + P+ Sbjct 532 GQAAEPE 538 >gi|296167069|ref|ZP_06849480.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897559|gb|EFG77154.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=525 Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/533 (82%), Positives = 471/533 (89%), Gaps = 8/533 (1%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +T A +S+ ISP PLA DLR DNRDCPSRTD LGAALA VVGGPVGRHALIGRTRLMT Sbjct 1 MTDAEQRSATISPGPLAGDLRCVDNRDCPSRTDSLGAALAEVVGGPVGRHALIGRTRLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMF I LVFLALGWSTKAACLQSTGTG GDQRVANW+NQRAYY+LCYSDTVPLYGAE Sbjct 61 PLRVMFLIGLVFLALGWSTKAACLQSTGTGTGDQRVANWENQRAYYELCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQG+FPYKSSW+ETD +GTPQ RYDG+ AVRYMEYPVLTG+YQY+SMA+AKTYTALSK Sbjct 121 LLSQGRFPYKSSWVETDGSGTPQTRYDGRPAVRYMEYPVLTGMYQYVSMALAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 +APLPVVAEVVMFFN+AAFGLALAWL T+WAT+GLAGRR+WDAALVAASPLVIFQIFTNF Sbjct 181 LAPLPVVAEVVMFFNIAAFGLALAWLGTIWATAGLAGRRVWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALATGLA +GLLAWARR+PV AGVLIGLG+AAKLYPLLFL P+++L IR GR ALART Sbjct 241 DALATGLAMAGLLAWARRKPVAAGVLIGLGAAAKLYPLLFLGPMVVLAIRTGRFRALART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 AA TWLLVNLPV++LFPRGWSEFFRLNTRRGDDMDS+YNVVKSFTGWRGFDP LGFW Sbjct 301 AGTAAVTWLLVNLPVLVLFPRGWSEFFRLNTRRGDDMDSVYNVVKSFTGWRGFDPKLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPP VLNTVVT+LFV+ CAAIAY+ LTAP RPR+AQL FL VA FLL NKVWSPQFSLWL Sbjct 361 EPPTVLNTVVTVLFVIGCAAIAYVVLTAPQRPRLAQLLFLVVAVFLLTNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRRILLAWMT+DA VWVPRMYYLYGNP+RSLPEQ+FTTTVL+RD AV+ LC Sbjct 421 VPLAVLALPHRRILLAWMTVDAAVWVPRMYYLYGNPNRSLPEQFFTTTVLVRDAAVIALC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLR 533 LV+ QIYRP DLVR G VDDP GG F A DAPPG LP WLR Sbjct 481 ALVIRQIYRPDEDLVRWG--------ARVDDPSGGPFDRAPDAPPGWLPDWLR 525 >gi|342860219|ref|ZP_08716871.1| hypothetical protein MCOL_15120 [Mycobacterium colombiense CECT 3035] gi|342132597|gb|EGT85826.1| hypothetical protein MCOL_15120 [Mycobacterium colombiense CECT 3035] Length=552 Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/548 (80%), Positives = 475/548 (87%), Gaps = 11/548 (2%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +T A + SP LAADLRSADNRDCPSR D LGAALA+VVGGPVGRHALIGR+RLMT Sbjct 1 MTEAAEHGATTSPQRLAADLRSADNRDCPSRNDFLGAALADVVGGPVGRHALIGRSRLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMF IALVFLALGWSTKAACLQSTGTG DQRVANWDNQRAYY+LCYSDTVPLY AE Sbjct 61 PLRVMFLIALVFLALGWSTKAACLQSTGTGAADQRVANWDNQRAYYELCYSDTVPLYSAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSW+ETDS+G Q+RYDGQ AVRYMEYPVLTG+YQY+SMA+AKTYTALSK Sbjct 121 LLSQGKFPYKSSWVETDSSGAQQIRYDGQPAVRYMEYPVLTGVYQYVSMALAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 +APLPVVAEVVMFF++AAFGLALAWL TVWA++GLAGRRIWDAALVA SP++IFQIFTNF Sbjct 181 LAPLPVVAEVVMFFDIAAFGLALAWLATVWASAGLAGRRIWDAALVAGSPILIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALAT A +GLL WARR+PVLAGVLIGLG+AAKLYPLLFL P+LLLGIR GRL A RT Sbjct 241 DALATAFAMAGLLTWARRKPVLAGVLIGLGAAAKLYPLLFLGPMLLLGIRTGRLRAWVRT 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 AA TWLLVNLPV++ FPRGWSEFFRLNTRRGDDMDS+YNV+KSFTGWRGFDP LGFW Sbjct 301 AVAAGVTWLLVNLPVLVFFPRGWSEFFRLNTRRGDDMDSVYNVIKSFTGWRGFDPKLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 +PP VLNTVV +LFV CAAIA+I LTAP RPRVAQL FL VA+FLL NKVWSPQFSLWL Sbjct 361 QPPTVLNTVVAVLFVASCAAIAFIVLTAPQRPRVAQLLFLVVAAFLLTNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRR+LLAWMT+DALVWVPRMYYLYGNP+RSLPEQ+FTTTVLLRDIAV+VLC Sbjct 421 VPLAVLALPHRRLLLAWMTVDALVWVPRMYYLYGNPNRSLPEQFFTTTVLLRDIAVIVLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 LV+ QIYRPG DLVR G G VDDP GG F A DAPP LP WLRP +G Sbjct 481 ALVIRQIYRPGEDLVRWG--------GRVDDPAGGPFDRAPDAPPAWLPDWLRP-VGSR- 530 Query 541 ARERTPDA 548 R PD+ Sbjct 531 -RSSVPDS 537 >gi|41406163|ref|NP_958999.1| hypothetical protein MAP0065 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394511|gb|AAS02382.1| hypothetical protein MAP_0065 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459419|gb|EGO38361.1| putative integral membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=545 Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/547 (81%), Positives = 474/547 (87%), Gaps = 9/547 (1%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +TGA S+ ISP PLAAD RSADNRDCPSR D LGAA A V+GGPVGRHALIGR R+MT Sbjct 1 MTGAAEPSATISPGPLAADRRSADNRDCPSRNDFLGAAFAEVIGGPVGRHALIGRARIMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMF IALVFLALGWSTKAACLQSTGTG GDQRVANWDNQRAYY+LCYSDTVPLYGAE Sbjct 61 PLRVMFLIALVFLALGWSTKAACLQSTGTGTGDQRVANWDNQRAYYELCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDS G Q+RYDGQ AVRYMEYPVLTG+YQY+SMA+AKTYTALSK Sbjct 121 LLSQGKFPYKSSWIETDSTGAQQIRYDGQPAVRYMEYPVLTGMYQYVSMALAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 +APLPVVAEVVMFFN+AAFGLALAWL TVWA++GLAGRRIWDAALVA SPL+IFQIFTNF Sbjct 181 LAPLPVVAEVVMFFNIAAFGLALAWLATVWASAGLAGRRIWDAALVAGSPLLIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALAT A +GLLAWARRRPVLAGVL+GLG+AAKLYPLLFL P+LLLGIR GRL A ART Sbjct 241 DALATAFAMAGLLAWARRRPVLAGVLVGLGAAAKLYPLLFLGPMLLLGIRTGRLGAWART 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 AA ATWLLVNLPV++ FPRGWSEFFRLNTRR +DMDSLYNVVKSFTGWRGFDP LGFW Sbjct 301 AVAAVATWLLVNLPVLVFFPRGWSEFFRLNTRRAEDMDSLYNVVKSFTGWRGFDPKLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 +PP VLNTVV +LFV CCAAIA+IALTAP RPR QL FL VA+FLL NKVWSPQFSLWL Sbjct 361 QPPTVLNTVVAVLFVTCCAAIAFIALTAPRRPRATQLVFLVVAAFLLTNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRR+LLAWMT+DALVWVPRMYYLYGNP+RSLPEQ FTTTVLLRDIAV+ LC Sbjct 421 VPLAVLALPHRRVLLAWMTVDALVWVPRMYYLYGNPNRSLPEQVFTTTVLLRDIAVITLC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 LV+ QIYRP DLVR G G VDDP GG F A DAPPG LP WLRP G Sbjct 481 ALVIRQIYRPDEDLVRWG--------GRVDDPAGGPFDRAPDAPPGWLPDWLRP-AGSRR 531 Query 541 ARERTPD 547 + P+ Sbjct 532 GQAAEPE 538 >gi|240168781|ref|ZP_04747440.1| hypothetical protein MkanA1_05680 [Mycobacterium kansasii ATCC 12478] Length=510 Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/500 (83%), Positives = 449/500 (90%), Gaps = 8/500 (1%) Query 35 LGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQ 94 +GAALA+VVGGPVGRHALIGRTR MTPLRVMF IALVFLALGWSTKAACLQ+TGTGPGD+ Sbjct 1 MGAALADVVGGPVGRHALIGRTRFMTPLRVMFVIALVFLALGWSTKAACLQTTGTGPGDK 60 Query 95 RVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRY 154 RVANWDNQRAYY+LCYSDTVPLYGAELLSQGKFPYKSSW+ETDS G PQ++Y+G++AVRY Sbjct 61 RVANWDNQRAYYELCYSDTVPLYGAELLSQGKFPYKSSWVETDSTGAPQIQYNGRLAVRY 120 Query 155 MEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSG 214 MEYPVLTG+YQY+SMAIAKTYTALS V PLPV+AEVVMFFN AAFGLA+AWL TVWATSG Sbjct 121 MEYPVLTGLYQYMSMAIAKTYTALSNVTPLPVIAEVVMFFNAAAFGLAIAWLATVWATSG 180 Query 215 LAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAK 274 LAGRRIWDAALVAASPL+IFQIFTNFDALAT A GLLAWARRRP LAG+LIGLG+AAK Sbjct 181 LAGRRIWDAALVAASPLLIFQIFTNFDALATAFAMGGLLAWARRRPWLAGLLIGLGAAAK 240 Query 275 LYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRG 334 LYPLLFL PL++LGIR GRL A+ RT AAA TWL VNLP+M+L+PRGWSEFFRLNTRRG Sbjct 241 LYPLLFLGPLVVLGIRTGRLGAVGRTALAAAVTWLAVNLPIMVLYPRGWSEFFRLNTRRG 300 Query 335 DDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRV 394 DDMDSLYNVVKS+TGWRGFDP GFWEPP+VLNTVVT+LF LCCAAIAYIA TAP RPRV Sbjct 301 DDMDSLYNVVKSYTGWRGFDPVRGFWEPPMVLNTVVTVLFALCCAAIAYIAFTAPQRPRV 360 Query 395 AQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYG 454 AQL FL VA+FLL NKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYG Sbjct 361 AQLIFLVVAAFLLTNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYG 420 Query 455 NPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVG 514 NP+RSLP+QWFTTTVLLRDIAV+VLC L++ QIYRP DLVR G VDDP G Sbjct 421 NPNRSLPQQWFTTTVLLRDIAVIVLCALIIRQIYRPREDLVRWN--------GRVDDPAG 472 Query 515 GVFANAADAPPGRLPSWLRP 534 G + A DA PG LP+WLRP Sbjct 473 GGYDRAPDAAPGWLPNWLRP 492 >gi|118615981|ref|YP_904313.1| hypothetical protein MUL_0069 [Mycobacterium ulcerans Agy99] gi|118568091|gb|ABL02842.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length=546 Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/545 (80%), Positives = 469/545 (87%), Gaps = 12/545 (2%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +T A + SP PLA DLRSAD RD PSRTDVLG+ALA +GGPVGRHALIGR R MT Sbjct 1 MTDARTPRCATSPEPLARDLRSADYRDFPSRTDVLGSALAGGIGGPVGRHALIGRARFMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 P+RVMF +ALVFLALGWSTKAACLQ+TGTGPGD+RVANWDNQRAYY+LCYSDTVPLYGAE Sbjct 61 PVRVMFLMALVFLALGWSTKAACLQTTGTGPGDERVANWDNQRAYYELCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LL+QGKFPYKSSWIET+ GTPQ++YDG+IAVRYMEYPVLTG+YQYLSMA+AKTYTALSK Sbjct 121 LLNQGKFPYKSSWIETNGEGTPQIQYDGRIAVRYMEYPVLTGVYQYLSMALAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 VAPLPV+AEVVMFFN AA GLALAWL TVWAT+GLAGRRIWDAALVAASPLVIFQIFTNF Sbjct 181 VAPLPVIAEVVMFFNAAALGLALAWLATVWATAGLAGRRIWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALAT A GLLAWARR+P L+GVLIGLG+AAKLYPLLFL L +LGIR+GRL + R Sbjct 241 DALATAFAMGGLLAWARRKPWLSGVLIGLGAAAKLYPLLFLGVLAVLGIRSGRLGGVLRA 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 AATWL+VNLPVM+L+PRGWSEFFRLNTRRG+DMDSLYNV+KSFTGWRGFDP+LGFW Sbjct 301 TLPTAATWLMVNLPVMVLYPRGWSEFFRLNTRRGEDMDSLYNVIKSFTGWRGFDPSLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPP+VLNTVVT LF L CAAI YIALTAP RPR+AQ+ FL VA+FLL NKVWSPQFSLWL Sbjct 361 EPPVVLNTVVTALFGLACAAIVYIALTAPRRPRLAQVAFLVVAAFLLTNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRR+LLAWMTIDALVWVPRMYYLY N SRSLPEQWFTTTVLLRDIAVM LC Sbjct 421 VPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYDNASRSLPEQWFTTTVLLRDIAVMALC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 LV+ QIYRP DLVR G +DDP GG F AADAPPG LP WLRP H Sbjct 481 ALVIRQIYRPEEDLVRWD--------GRIDDPAGGTFDRAADAPPGWLPGWLRP----VH 528 Query 541 ARERT 545 +R T Sbjct 529 SRRVT 533 >gi|183980105|ref|YP_001848396.1| hypothetical protein MMAR_0070 [Mycobacterium marinum M] gi|183173431|gb|ACC38541.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length=546 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/554 (80%), Positives = 476/554 (86%), Gaps = 12/554 (2%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 +T A +Q SP PLA DLRSAD RD PSRTDVLG+ALA V+GGPVGRHALIGR R MT Sbjct 1 MTDARTQRCATSPEPLARDLRSADYRDFPSRTDVLGSALAGVIGGPVGRHALIGRARFMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 P+RVMF +ALVFLALGWSTKAACLQSTGTGPGD+RVANWDNQRAYY+LCYSDTVPLYGAE Sbjct 61 PVRVMFLMALVFLALGWSTKAACLQSTGTGPGDERVANWDNQRAYYELCYSDTVPLYGAE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LL+QGKFPYKSSWIET+ GTPQ++YDG+IAVRYMEYPVLTG+YQYLSMA+AKTYTALSK Sbjct 121 LLNQGKFPYKSSWIETNGEGTPQIQYDGRIAVRYMEYPVLTGVYQYLSMALAKTYTALSK 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 VAPLPV+AEVVMFFN AA GLALAWL TVWAT+GLAGRRIWDAALVAASPLVIFQIFTNF Sbjct 181 VAPLPVIAEVVMFFNAAALGLALAWLATVWATAGLAGRRIWDAALVAASPLVIFQIFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALAT A GLLAWARR+P L+GVLIGLG+AAKLYPLLFL L +LGIR+GRL + R Sbjct 241 DALATAFAMGGLLAWARRKPWLSGVLIGLGAAAKLYPLLFLGVLAVLGIRSGRLGGVLRA 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 A AATWL+VNLPVM+L+PRGWSEFFRLNTRRG+DMDSLYNV+KSFTGWRGFDP+LGFW Sbjct 301 ALATAATWLMVNLPVMVLYPRGWSEFFRLNTRRGEDMDSLYNVIKSFTGWRGFDPSLGFW 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPP+VLNTVVT+LF L CAAI YIALTAP RPR+AQ+ FL VA FLL NKVWSPQFSLWL Sbjct 361 EPPVVLNTVVTVLFGLACAAIVYIALTAPRRPRLAQVAFLVVAVFLLTNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRR+LLAWMTIDALVWVPRMYYLYGN SRSLPEQWFTTTVLLRDIAVM LC Sbjct 421 VPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNASRSLPEQWFTTTVLLRDIAVMALC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRP----RL 536 LV+ QIYRP DLVR G +DDP GG F AADAPPG LP WLRP R+ Sbjct 481 ALVIRQIYRPEEDLVRWD--------GRIDDPAGGTFDRAADAPPGWLPGWLRPVHSRRV 532 Query 537 GDEHARERTPDAGR 550 A E P GR Sbjct 533 TVAAAPEPVPVGGR 546 >gi|254818595|ref|ZP_05223596.1| hypothetical protein MintA_01664 [Mycobacterium intracellulare ATCC 13950] Length=503 Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/507 (81%), Positives = 444/507 (88%), Gaps = 9/507 (1%) Query 46 PVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAY 105 PVGRHALIGR RLMTPLRVMF I LVFLALGWSTKAACLQSTGTG GDQRVANWDNQRAY Sbjct 1 PVGRHALIGRARLMTPLRVMFLIGLVFLALGWSTKAACLQSTGTGTGDQRVANWDNQRAY 60 Query 106 YQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQ 165 Y+LCYSDTVPLYGAELLSQGKFPYKSSWIETDS G Q+RYDG+ AVRYMEYPVLTG+YQ Sbjct 61 YELCYSDTVPLYGAELLSQGKFPYKSSWIETDSTGAQQIRYDGRPAVRYMEYPVLTGMYQ 120 Query 166 YLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAAL 225 Y+SMA+AKTYTALSK+ PLPVVAEVVMFFNV+AFGLALAWL TVWA++GLAGRR+WDAAL Sbjct 121 YVSMALAKTYTALSKLVPLPVVAEVVMFFNVSAFGLALAWLATVWASAGLAGRRVWDAAL 180 Query 226 VAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLL 285 VAASP++IFQIFTNFDALATG A +GLLAWARRRP+LAGVLIGLG+AAKLYPLLFL P+L Sbjct 181 VAASPVLIFQIFTNFDALATGFAMAGLLAWARRRPMLAGVLIGLGAAAKLYPLLFLGPML 240 Query 286 LLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVK 345 LLGIR GRL A RT AAA TWLLVNLPV++ FPRGWSEFFRLNTRRGDDMDSLYNVVK Sbjct 241 LLGIRTGRLRAWGRTAAAAVVTWLLVNLPVLVFFPRGWSEFFRLNTRRGDDMDSLYNVVK 300 Query 346 SFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASF 405 SFTGWRGFDP LGFW+PP VLNTVV +LFV CCAAIA+I LTAP RPRVAQ+ FL VA+F Sbjct 301 SFTGWRGFDPKLGFWQPPTVLNTVVAVLFVTCCAAIAFIILTAPRRPRVAQVVFLVVAAF 360 Query 406 LLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWF 465 LL NKVWSPQFSLWLVPLAVLALPHRR+LLAWMTIDALVWVPRMYYLYGNP+RSLPEQ+F Sbjct 361 LLTNKVWSPQFSLWLVPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPNRSLPEQFF 420 Query 466 TTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPP 525 TTTVLLRD+AV+ LC LV+ QIYRP DLVR G G VDDP GG F A DAPP Sbjct 421 TTTVLLRDVAVIALCALVIRQIYRPDEDLVRWG--------GRVDDPAGGPFDRAPDAPP 472 Query 526 GRLPSWLRPRLGDEHARERTPDAGRDR 552 G LP WLRP +G A P+ ++ Sbjct 473 GWLPDWLRP-VGSRRASAPVPEDADEQ 498 >gi|15828451|ref|NP_302714.1| hypothetical protein ML2687 [Mycobacterium leprae TN] gi|221230928|ref|YP_002504344.1| hypothetical protein MLBr_02687 [Mycobacterium leprae Br4923] gi|2959413|emb|CAA17955.1| putative transmembrane protein [Mycobacterium leprae] gi|13093881|emb|CAC32219.1| conserved membrane protein [Mycobacterium leprae] gi|219934035|emb|CAR72787.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=564 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/534 (79%), Positives = 451/534 (85%), Gaps = 8/534 (1%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 + A + S+ ISP PLAAD +SADNRDCPSRTD LGAALA+ +GGPVG HALIGR+ LMT Sbjct 1 MINAQTHSTTISPRPLAADRQSADNRDCPSRTDYLGAALADAIGGPVGCHALIGRSWLMT 60 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLRVMF I LVFLALGWSTKAACLQ+TGTGPG QRV NWDNQRAYY+LCYSD VPLYG E Sbjct 61 PLRVMFLIGLVFLALGWSTKAACLQTTGTGPGGQRVPNWDNQRAYYELCYSDIVPLYGTE 120 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LLSQGKFPYKSSWIETDS+GTP+ RYDG++AVRYMEYPVLTGIYQY+SMA+AK+YTALS+ Sbjct 121 LLSQGKFPYKSSWIETDSSGTPRTRYDGRLAVRYMEYPVLTGIYQYVSMAVAKSYTALSE 180 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 LP VAEVVMFF+V AFGLALAWL T+WAT+GLAG RIWDAALVAASPLVIFQ+FTNF Sbjct 181 PVSLPAVAEVVMFFDVVAFGLALAWLATIWATAGLAGLRIWDAALVAASPLVIFQVFTNF 240 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALA AT GLLAW+R RP+ AGVLIGLG+AAKLYPLLFL PL +LG+R GRL +A Sbjct 241 DALAIAFATGGLLAWSRCRPISAGVLIGLGAAAKLYPLLFLVPLFVLGVRTGRLGGVACA 300 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 AA TWLLVNLPV+LLFPRGWSEFFR NTRRGDDMDSLYNVVKS TGWRGFD LGF Sbjct 301 AVTAATTWLLVNLPVLLLFPRGWSEFFRFNTRRGDDMDSLYNVVKSLTGWRGFDTKLGFC 360 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 E PLVLNTVVT+LF LCCAA+AYIALTA RPRV QL FL VA FLL NKVWSPQFSLWL Sbjct 361 ELPLVLNTVVTVLFALCCAAVAYIALTAAQRPRVVQLAFLLVAVFLLTNKVWSPQFSLWL 420 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRR+LLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFT TVLLRDIAV+ LC Sbjct 421 VPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTATVLLRDIAVVALC 480 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRP 534 LV+ QIYRP D VR G G VDDP GG F A APP LP WL P Sbjct 481 ALVIRQIYRPDEDPVRLG--------GRVDDPAGGPFDRAPYAPPSWLPDWLHP 526 >gi|108802330|ref|YP_642527.1| hypothetical protein Mmcs_5371 [Mycobacterium sp. MCS] gi|119871483|ref|YP_941435.1| hypothetical protein Mkms_5460 [Mycobacterium sp. KMS] gi|126438310|ref|YP_001074001.1| hypothetical protein Mjls_5747 [Mycobacterium sp. JLS] gi|108772749|gb|ABG11471.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697572|gb|ABL94645.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126238110|gb|ABO01511.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=544 Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/524 (77%), Positives = 440/524 (84%), Gaps = 8/524 (1%) Query 11 ISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIAL 70 +SP PLA DLRSA++RD PSRTD +GAAL+ +GGPVGRHALIGR RLMTPLRVM IA+ Sbjct 1 MSPSPLAQDLRSAEDRDLPSRTDRIGAALSETIGGPVGRHALIGRQRLMTPLRVMLIIAV 60 Query 71 VFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYK 130 VFLALG+STKAACLQ+TG G DQRVANWDN RAYYQLCYSDTVPLY AELL+QGKFPYK Sbjct 61 VFLALGYSTKAACLQTTGGGSADQRVANWDNNRAYYQLCYSDTVPLYTAELLNQGKFPYK 120 Query 131 SSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEV 190 SSWIETD +G P++ YDGQ+AVRYMEYPVLTG+YQY+SMA+AKTY+A+++ A +PVVAEV Sbjct 121 SSWIETDGSGEPRMTYDGQVAVRYMEYPVLTGLYQYVSMALAKTYSAVTRAASIPVVAEV 180 Query 191 VMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATS 250 VMFFN+AAFGLALAWL TVWAT+ LAGRR+WDAALVAASPLVIFQIFTNFDALAT A Sbjct 181 VMFFNIAAFGLALAWLATVWATAMLAGRRVWDAALVAASPLVIFQIFTNFDALATAFAVG 240 Query 251 GLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLL 310 +LAWARRRPVLAG LIGLG AAKLYPLL L PL LL +R GR +A+T A A ATWLL Sbjct 241 AMLAWARRRPVLAGALIGLGVAAKLYPLLLLVPLALLAVRTGRWREVAKTAATAFATWLL 300 Query 311 VNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVV 370 VNLP+M+LFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGW GFD LGFW+PP VLN V Sbjct 301 VNLPIMVLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWGGFDTGLGFWQPPTVLNAVT 360 Query 371 TLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPH 430 +LF CC AI IALTA RPR+AQL FL VA+FLL NKVWSPQFSLWLVPLAVLALPH Sbjct 361 AVLFASCCIAIGVIALTARQRPRLAQLAFLVVAAFLLTNKVWSPQFSLWLVPLAVLALPH 420 Query 431 RRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRP 490 RRILLAWMTIDALVWVPRM YLYG +R LPEQWFT TVLLRDIAV+ LC LV+ QIYRP Sbjct 421 RRILLAWMTIDALVWVPRMLYLYGEANRGLPEQWFTATVLLRDIAVITLCALVIRQIYRP 480 Query 491 GRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRP 534 DLVR G G VDDP GGVF A D PP LP WLRP Sbjct 481 ELDLVRYG--------GRVDDPAGGVFDRAPDDPPRWLPDWLRP 516 >gi|118474015|ref|YP_891099.1| hypothetical protein MSMEG_6899 [Mycobacterium smegmatis str. MC2 155] gi|118175302|gb|ABK76198.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=554 Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/544 (71%), Positives = 442/544 (82%), Gaps = 9/544 (1%) Query 6 SQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVM 65 Q +SP PLA + SAD+RD PSR D + +AL+ V+GGPVGRHALIGR R MTPLR + Sbjct 4 DQPGGVSPAPLAPNRASADDRDLPSRNDPMSSALSQVIGGPVGRHALIGRARFMTPLRAI 63 Query 66 FAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQG 125 IA+VFLALG+STKAACLQ+TGTG QRVANW+N RAYY+LCYSDTVPLY AELL+ G Sbjct 64 LLIAVVFLALGYSTKAACLQTTGTGTAGQRVANWENNRAYYELCYSDTVPLYTAELLNLG 123 Query 126 KFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLP 185 KFPYKSSWIE DS+G P+++YDG A+RYMEYPV+TGIYQY++M++AKTYTAL+K+ +P Sbjct 124 KFPYKSSWIEKDSSGKPRVQYDGSPAIRYMEYPVITGIYQYVAMSLAKTYTALTKLVAIP 183 Query 186 VVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALAT 245 +VAEVVMFFN+AAFGLALAWL T+WATS +AGRR+WDAALVAASP+VIFQIFTNFDALAT Sbjct 184 IVAEVVMFFNIAAFGLALAWLATIWATSRMAGRRVWDAALVAASPIVIFQIFTNFDALAT 243 Query 246 GLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAA 305 A +LAW+RR+PV+AG LIGLG AAKLYPLL L PL+LL +R GR+ + +T A Sbjct 244 AAAAGAMLAWSRRKPVVAGALIGLGVAAKLYPLLLLIPLVLLAVRTGRMRDVGKTALTAV 303 Query 306 ATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLV 365 ATWL+VNLP+M+LFPRGWSEFFRLNTRRGDDMDS+YNVVKSFTGWRGFDP LGFWEPP Sbjct 304 ATWLVVNLPIMVLFPRGWSEFFRLNTRRGDDMDSIYNVVKSFTGWRGFDPGLGFWEPPTT 363 Query 366 LNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAV 425 LNTV +LF CC AI YI LTAP RPR+AQL FL VA+FLL NKVWSPQFSLWLVPLAV Sbjct 364 LNTVTAILFAACCIAIGYITLTAPQRPRLAQLAFLVVAAFLLTNKVWSPQFSLWLVPLAV 423 Query 426 LALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVW 485 LALPHRRILLAWMTIDALVWVPRM YLYG ++ LPEQ+FTTTVLLRDIAV+ LC LV+ Sbjct 424 LALPHRRILLAWMTIDALVWVPRMLYLYGESNKGLPEQFFTTTVLLRDIAVIALCALVIR 483 Query 486 QIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARERT 545 QIYRP DLVR G +DDP GG++ A D+PP LP LRP A ER Sbjct 484 QIYRPELDLVRWH--------GRIDDPTGGIYDRAPDSPPKWLPDRLRPTASRVRA-ERA 534 Query 546 PDAG 549 AG Sbjct 535 SAAG 538 >gi|6708175|gb|AAF25828.1|AF187306_1 putative transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=692 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/549 (71%), Positives = 445/549 (82%), Gaps = 11/549 (2%) Query 1 VTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMT 60 VTG Q +SP PLA + SAD+RD PSR D + +AL+ V+GGPVGRHALIGR R MT Sbjct 139 VTG--DQPGGVSPAPLAPNRASADDRDLPSRNDPMSSALSQVIGGPVGRHALIGRARFMT 196 Query 61 PLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAE 120 PLR + IA+VFLALG+STKAACLQ+TGTG QRVANW+N RAYY+LCYSDTVPLY AE Sbjct 197 PLRAILLIAVVFLALGYSTKAACLQTTGTGTAGQRVANWENNRAYYELCYSDTVPLYTAE 256 Query 121 LLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK 180 LL+ GKFPYKSSWIE DS+G P+++YDG A+RYMEYPV+TGIYQY++M++AKTYTAL+K Sbjct 257 LLNLGKFPYKSSWIEKDSSGKPRVQYDGSPAIRYMEYPVITGIYQYVAMSLAKTYTALTK 316 Query 181 VAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNF 240 + +P+VAEVVMFFN+AAFGLALAWL T+WATS +AGRR+WDAALVAASP+VIFQIFTNF Sbjct 317 LVAIPIVAEVVMFFNIAAFGLALAWLATIWATSRMAGRRVWDAALVAASPIVIFQIFTNF 376 Query 241 DALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALART 300 DALAT A +LAW+RR+PV+AG LIGLG AAKLYPLL L PL+LL +R GR+ + +T Sbjct 377 DALATAAAAGAMLAWSRRKPVVAGALIGLGVAAKLYPLLLLIPLVLLAVRTGRMRDVGKT 436 Query 301 MAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFW 360 A ATWL+VNLP+M+LFPRGWSEFFRLNTRRGDDMDS+YNVVKSFTGWRGFDP LGFW Sbjct 437 ALTAVATWLVVNLPIMVLFPRGWSEFFRLNTRRGDDMDSIYNVVKSFTGWRGFDPGLGFW 496 Query 361 EPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWL 420 EPP LNTV +LF CC AI YI LTAP RPR+AQL FL VA+FLL NKVWSPQFSLWL Sbjct 497 EPPTTLNTVTAILFAACCIAIGYITLTAPQRPRLAQLAFLVVAAFLLTNKVWSPQFSLWL 556 Query 421 VPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLC 480 VPLAVLALPHRRILLAWMTIDALVWVPRM YLYG ++ LPEQ+FTTTVLLRDIAV+ LC Sbjct 557 VPLAVLALPHRRILLAWMTIDALVWVPRMLYLYGESNKGLPEQFFTTTVLLRDIAVIALC 616 Query 481 GLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 LV+ QIYRP DLVR G +DDP GG++ A D+PP LP LRP Sbjct 617 ALVIRQIYRPELDLVRWH--------GRIDDPTGGIYDRAPDSPPKWLPDRLRPTASRVR 668 Query 541 ARERTPDAG 549 A ER AG Sbjct 669 A-ERASAAG 676 >gi|315446782|ref|YP_004079661.1| integral membrane protein [Mycobacterium sp. Spyr1] gi|315265085|gb|ADU01827.1| predicted integral membrane protein [Mycobacterium sp. Spyr1] Length=530 Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/525 (76%), Positives = 436/525 (84%), Gaps = 10/525 (1%) Query 12 SPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALV 71 SP PL DLRS D+RD PSRTD LGAAL+ +GGPVGRHALIGRTR MTPLRVM IALV Sbjct 3 SPSPLGTDLRSLDSRDMPSRTDTLGAALSGTIGGPVGRHALIGRTRFMTPLRVMLIIALV 62 Query 72 FLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKS 131 FLALG+STKAACLQ+TGTG DQRV NW+NQRAYYQLCYSDTVPLY AELL+ GKFPYKS Sbjct 63 FLALGYSTKAACLQTTGTGTADQRVGNWENQRAYYQLCYSDTVPLYTAELLNLGKFPYKS 122 Query 132 SWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVV 191 SW+ETD+ G P+++YDG+ AVRYMEYPVLTG+YQYLSM +AKTYTAL+KV +PV+AEVV Sbjct 123 SWVETDAEGRPRVQYDGEPAVRYMEYPVLTGLYQYLSMTVAKTYTALTKVVSIPVIAEVV 182 Query 192 MFFNVAAFGLALAWLTTVWATSGLAG-RRIWDAALVAASPLVIFQIFTNFDALATGLATS 250 MFFN+AA GLALAWLTT+WAT+ LAG RRIWDAAL+AASP+VIFQIFTNFDALAT A Sbjct 183 MFFNIAALGLALAWLTTLWATAMLAGPRRIWDAALIAASPIVIFQIFTNFDALATAFAAC 242 Query 251 GLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLL 310 G+LAWARRRPVLAGVLIGLG AAKLYPLL L PL+LL +R GR+ +T+ AA WL Sbjct 243 GMLAWARRRPVLAGVLIGLGVAAKLYPLLLLIPLVLLAVRTGRVREAGKTVVAAVVAWLA 302 Query 311 VNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVV 370 VNLP+M+LFPRGWSEFFRLNTRRGDDMDS+YNVVKSFTGW GFDP LGFWEPP+VLNTV Sbjct 303 VNLPIMVLFPRGWSEFFRLNTRRGDDMDSIYNVVKSFTGWGGFDPDLGFWEPPVVLNTVT 362 Query 371 TLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPH 430 LF C AIAYI LTA RPRVAQ+ FL VA+FLL NKVWSPQFSLWLVPLAVLALPH Sbjct 363 AALFAACLIAIAYIVLTATRRPRVAQIAFLVVAAFLLTNKVWSPQFSLWLVPLAVLALPH 422 Query 431 RRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRP 490 RRILLAWMT+D LVWVPRM YL+G LPEQ FT TVLLRDIAV+ LC LV+ QIYRP Sbjct 423 RRILLAWMTVDMLVWVPRMLYLFGEQRMGLPEQAFTATVLLRDIAVITLCALVIRQIYRP 482 Query 491 GRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPR 535 DLVR GGVDDP GGVF A DAPP LP WLRPR Sbjct 483 ELDLVRH---------GGVDDPAGGVFDRAIDAPPKWLPDWLRPR 518 >gi|145221466|ref|YP_001132144.1| hypothetical protein Mflv_0872 [Mycobacterium gilvum PYR-GCK] gi|145213952|gb|ABP43356.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=530 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/525 (76%), Positives = 436/525 (84%), Gaps = 10/525 (1%) Query 12 SPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALV 71 SP PL DLRS D+RD PSRTD LGAAL+ +GGPVGRHALIGRTR MTPLRVM IALV Sbjct 3 SPSPLETDLRSLDSRDMPSRTDTLGAALSGTIGGPVGRHALIGRTRFMTPLRVMLIIALV 62 Query 72 FLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKS 131 FLALG+STKAACLQ+TGTG DQRV NW+NQRAYYQLCYSDTVPLY AELL+ GKFPYKS Sbjct 63 FLALGYSTKAACLQTTGTGTADQRVGNWENQRAYYQLCYSDTVPLYTAELLNLGKFPYKS 122 Query 132 SWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVV 191 SW+ETD+ G P+++YDG+ AVRYMEYPVLTG+YQYLSM +AKTYTAL+KV +PV+AEVV Sbjct 123 SWVETDAEGRPRVQYDGEPAVRYMEYPVLTGLYQYLSMTVAKTYTALTKVVSIPVIAEVV 182 Query 192 MFFNVAAFGLALAWLTTVWATSGLAG-RRIWDAALVAASPLVIFQIFTNFDALATGLATS 250 MFFN+AA GLALAWLTT+WAT+ LAG RRIWDAAL+AASP+VIFQIFTNFDALAT A Sbjct 183 MFFNIAALGLALAWLTTLWATAMLAGPRRIWDAALIAASPIVIFQIFTNFDALATAFAAC 242 Query 251 GLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLL 310 G+LAWARRRPVLAGVLIGLG AAKLYPLL L PL+LL +R GR+ +T+ AA WL Sbjct 243 GMLAWARRRPVLAGVLIGLGVAAKLYPLLLLIPLVLLAVRTGRVREAGKTVVAAVVAWLA 302 Query 311 VNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVV 370 VNLP+M+LFPRGWSEFFRLNTRRGDDMDS+YNVVKSFTGW GFDP LGFWEPP+VLNTV Sbjct 303 VNLPIMVLFPRGWSEFFRLNTRRGDDMDSIYNVVKSFTGWGGFDPDLGFWEPPVVLNTVT 362 Query 371 TLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPH 430 LF C AIAYI LTA RPRVAQ+ FL VA+FLL NKVWSPQFSLWLVPLAVLALPH Sbjct 363 AALFAACLIAIAYIVLTATRRPRVAQIAFLVVAAFLLTNKVWSPQFSLWLVPLAVLALPH 422 Query 431 RRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRP 490 RRILLAWMT+D LVWVPRM YL+G LPEQ FT TVLLRDIAV+ LC LV+ QIYRP Sbjct 423 RRILLAWMTVDMLVWVPRMLYLFGEQRMGLPEQAFTATVLLRDIAVITLCALVIRQIYRP 482 Query 491 GRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPR 535 DLVR GGVDDP GGVF A DAPP LP WLRPR Sbjct 483 ELDLVRH---------GGVDDPAGGVFDRAIDAPPRWLPDWLRPR 518 >gi|169631973|ref|YP_001705622.1| hypothetical protein MAB_4900c [Mycobacterium abscessus ATCC 19977] gi|169243940|emb|CAM64968.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=543 Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/537 (70%), Positives = 431/537 (81%), Gaps = 11/537 (2%) Query 5 LSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRV 64 + S +SP PLA DLRSAD+RD PSRTD LGA L+ VVGGP+GRHAL+GR TPLRV Sbjct 1 MPTESTVSPEPLADDLRSADDRDFPSRTDALGAELSEVVGGPLGRHALVGRQPFWTPLRV 60 Query 65 MFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQ 124 +F IAL FL LGW++KA CLQ +GTG G QRVANWDN RAYYQLCYSDTVPLYGAELL+Q Sbjct 61 VFVIALGFLILGWTSKAPCLQQSGTGNGAQRVANWDNNRAYYQLCYSDTVPLYGAELLNQ 120 Query 125 GKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPL 184 G+FPYKSSW+ETDS G +++YDG AVRYMEYPV+TG+YQY +MA+AKTYT S V L Sbjct 121 GRFPYKSSWLETDSGGHQKIQYDGTPAVRYMEYPVVTGVYQYTAMALAKTYTQASDVLGL 180 Query 185 PVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGR-RIWDAALVAASPLVIFQIFTNFDAL 243 P+VAEVVMFFN+ AFGLALAWL T+WA++GL+ R WD ++AASP+VIFQIFTNFDAL Sbjct 181 PIVAEVVMFFNIVAFGLALAWLVTIWASAGLSPHTRPWDVVMIAASPIVIFQIFTNFDAL 240 Query 244 ATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAA 303 AT + + L AWAR++P LAGVLIGLG AAKLYP+L L PLLL+ +R+G+++ ++T A Sbjct 241 ATAFSMTALWAWARKKPWLAGVLIGLGVAAKLYPVLLLLPLLLVSLRSGKVHEFSKTAAG 300 Query 304 AAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPP 363 AAA+W+LVN+PV LFPRGW EFFRLNTRRGDDMDSLYNV KSFTGW+GFD LGFWEPP Sbjct 301 AAASWVLVNMPVATLFPRGWGEFFRLNTRRGDDMDSLYNVFKSFTGWQGFDGPLGFWEPP 360 Query 364 LVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPL 423 ++LN V +LF LCC I Y+ALTAP RPRVAQL FL VA FLL NKVWSPQFSLWLVPL Sbjct 361 VILNAVSAVLFGLCCLGIGYVALTAPRRPRVAQLAFLVVAVFLLTNKVWSPQFSLWLVPL 420 Query 424 AVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLV 483 AV+ALPHRRILLAWMT+DALVWVPRMYYL G ++ LPEQWFT TVL+RD+AV+ LC LV Sbjct 421 AVVALPHRRILLAWMTVDALVWVPRMYYLLGIENKGLPEQWFTGTVLVRDLAVIGLCALV 480 Query 484 VWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEH 540 + QIY PG DLVR G DDP GG ADAPPG LP+WLRPR H Sbjct 481 LRQIYHPGEDLVRAGD----------DDPAGGPCDGVADAPPGWLPAWLRPRKPAPH 527 >gi|333992949|ref|YP_004525563.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333488917|gb|AEF38309.1| transmembrane protein [Mycobacterium sp. JDM601] Length=530 Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/526 (73%), Positives = 435/526 (83%), Gaps = 15/526 (2%) Query 11 ISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIAL 70 +SPLPLA DLRSAD+RD P+RTD + AL+N +GGPVGRHAL+GR R MTPLRVMF IA+ Sbjct 2 VSPLPLAEDLRSADDRDLPTRTDDVVHALSNTIGGPVGRHALVGRARFMTPLRVMFLIAV 61 Query 71 VFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYK 130 +FLALGW+TK+ACLQS G+G D+RVANWDN+RAY+QLCYSD VPLY AELL+QGKFPYK Sbjct 62 LFLALGWTTKSACLQSVGSGGPDERVANWDNERAYFQLCYSDVVPLYTAELLNQGKFPYK 121 Query 131 SSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPV---V 187 SSW+E D G PQ+RYDG A RYMEYPVLTG+YQY +MA+AKTYTA++KV +P V Sbjct 122 SSWVEKDGTGKPQIRYDGLPAQRYMEYPVLTGLYQYSAMALAKTYTAITKVVKIPALSGV 181 Query 188 AEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGL 247 AEVV+FF++ A GLALAWL TVW+T+GLAGRR+WDAALVAASPLVIFQ+FTNFDALAT Sbjct 182 AEVVVFFDIVAVGLALAWLVTVWSTAGLAGRRVWDAALVAASPLVIFQVFTNFDALATAF 241 Query 248 ATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAAT 307 A +GLLAWARRRPV AGVL+GLG+AAKLYP+L LYPLLLLG+R GRL + RT+ A A + Sbjct 242 AGAGLLAWARRRPVAAGVLLGLGTAAKLYPVLLLYPLLLLGLRTGRLRDVRRTVVATALS 301 Query 308 WLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLN 367 WL VNLPV++ PRGW+EFFRLN+RRGDDMDS+YNVVKS TGWRGFD LG W+PP VLN Sbjct 302 WLAVNLPVLVFAPRGWTEFFRLNSRRGDDMDSIYNVVKSLTGWRGFDGELGLWQPPTVLN 361 Query 368 TVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLA 427 VV + F LCCA I YIALTAP RPRV QL FL VA+FLL NKVWSPQFSLWLVPLAVLA Sbjct 362 IVVAVSFALCCAGIGYIALTAPRRPRVTQLAFLLVAAFLLTNKVWSPQFSLWLVPLAVLA 421 Query 428 LPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQI 487 LPHRR+LLAWM +DALVWVPRMYYLY RSLPEQ FT+TVLLRD+AV+ LC LV+ QI Sbjct 422 LPHRRLLLAWMAVDALVWVPRMYYLYSVSDRSLPEQVFTSTVLLRDLAVLGLCALVIRQI 481 Query 488 YRPGR---DLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPS 530 YRP + DLVR GVDDP GGVF AADAPP LP+ Sbjct 482 YRPDQAPVDLVRE---------RGVDDPAGGVFDRAADAPPAWLPA 518 >gi|120406965|ref|YP_956794.1| hypothetical protein Mvan_6035 [Mycobacterium vanbaalenii PYR-1] gi|119959783|gb|ABM16788.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=561 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/535 (75%), Positives = 437/535 (82%), Gaps = 10/535 (1%) Query 12 SPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALV 71 SP P A D RS D RD PSRTD +GAAL+ +GGPVGRHALIGRTR +TPLRVM IALV Sbjct 16 SPAPPAEDRRSLDTRDLPSRTDTIGAALSETIGGPVGRHALIGRTRFLTPLRVMMIIALV 75 Query 72 FLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKS 131 FLALG+STKAACLQ+TGTG DQRV NW+NQRAYYQLCYSDTVPLY AELL+ GKFPYKS Sbjct 76 FLALGYSTKAACLQTTGTGAADQRVGNWENQRAYYQLCYSDTVPLYTAELLNLGKFPYKS 135 Query 132 SWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVV 191 SW+ETD+ G P+ +YDG+ AVRYMEYPVLTGIYQYLSM++AKTYTAL+K+ +PV+AEVV Sbjct 136 SWLETDAEGKPRAQYDGEPAVRYMEYPVLTGIYQYLSMSLAKTYTALTKLVSVPVIAEVV 195 Query 192 MFFNVAAFGLALAWLTTVWATSGLAG-RRIWDAALVAASPLVIFQIFTNFDALATGLATS 250 MFFN+AA GLALAWLTT+WAT+ LAG RRIWDAAL+AASPLVIFQIFTNFDALAT A Sbjct 196 MFFNIAALGLALAWLTTLWATAMLAGPRRIWDAALLAASPLVIFQIFTNFDALATAFAAG 255 Query 251 GLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLL 310 LLAWARRRP LAGVLIGLG AAKLYPLL L PL LL +R GRL +T AAA W++ Sbjct 256 ALLAWARRRPTLAGVLIGLGVAAKLYPLLLLVPLTLLAVRTGRLREAGKTAAAAVLAWVV 315 Query 311 VNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVV 370 VNLP+M+LFPRGWSEFFRLNTRRGDDMDS+YNVVKSFTGWRGFDP LGFWEPP+VLNTV Sbjct 316 VNLPIMVLFPRGWSEFFRLNTRRGDDMDSIYNVVKSFTGWRGFDPELGFWEPPVVLNTVT 375 Query 371 TLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPH 430 LF CC I YI LTA RPRVAQ+ FL VA+FLL NKVWSPQFSLWLVPLAVLALPH Sbjct 376 AALFAACCIVIGYIVLTAERRPRVAQIAFLVVAAFLLTNKVWSPQFSLWLVPLAVLALPH 435 Query 431 RRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRP 490 RRILLAWMT+D LVWVPRM YL+G LPEQ FT TVLLRD+AV+ LC LV+ +IYRP Sbjct 436 RRILLAWMTVDMLVWVPRMLYLFGEQKMGLPEQAFTATVLLRDLAVVGLCALVIREIYRP 495 Query 491 GRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARERT 545 G DLVR GGVDDP GGVF A DAPP LP WLRPR AR+ T Sbjct 496 GLDLVRQ---------GGVDDPAGGVFDGAPDAPPRWLPDWLRPRPLVNSARQAT 541 >gi|886306|gb|AAB53122.1| L222-ORF5; putative [Mycobacterium leprae] Length=418 Score = 588 bits (1517), Expect = 7e-166, Method: Compositional matrix adjust. Identities = 323/412 (79%), Positives = 348/412 (85%), Gaps = 8/412 (1%) Query 114 VPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAK 173 +PLYG ELLSQGKFPYKSSWIETDS+GTP+ RYDG++AVRYMEYPVLTGIYQY+SMA+AK Sbjct 1 MPLYGTELLSQGKFPYKSSWIETDSSGTPRTRYDGRLAVRYMEYPVLTGIYQYVSMAVAK 60 Query 174 TYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVI 233 +YTALS+ LP VAEVVMFF+V AFGLALAWL T+WAT+GLAG RIWDAALVAASPLVI Sbjct 61 SYTALSEPVSLPAVAEVVMFFDVVAFGLALAWLATIWATAGLAGLRIWDAALVAASPLVI 120 Query 234 FQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGR 293 FQ+FTNFDALA AT GLLAW+R RP+ AGVLIGLG+AAKLYPLLFL PL +LG+R R Sbjct 121 FQVFTNFDALAIAFATGGLLAWSRCRPISAGVLIGLGAAAKLYPLLFLVPLFVLGVRRRR 180 Query 294 LNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGF 353 L +A AA TWLLVNLPV+LLFPRGWSEFFR NTRRGDDMDSLYNVVKS TGWRGF Sbjct 181 LGGVACAAVTAATTWLLVNLPVLLLFPRGWSEFFRFNTRRGDDMDSLYNVVKSLTGWRGF 240 Query 354 DPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWS 413 D LGF E PLVLNTVVT+LF LCCAA+AYIALTA RPRV QL FL VA FLL NKVWS Sbjct 241 DTKLGFCELPLVLNTVVTVLFALCCAAVAYIALTAAQRPRVVQLAFLLVAVFLLTNKVWS 300 Query 414 PQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRD 473 PQFSLWLVPLAVLALPHRR+LLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFT TVLLRD Sbjct 301 PQFSLWLVPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTATVLLRD 360 Query 474 IAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPP 525 IAV+ LC LV+ QIYRP D VR G G VDDP GG F A APP Sbjct 361 IAVVALCALVIRQIYRPDEDPVRLG--------GRVDDPAGGPFDRAPYAPP 404 >gi|229489893|ref|ZP_04383748.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229323189|gb|EEN88955.1| putative membrane protein [Rhodococcus erythropolis SK121] Length=525 Score = 575 bits (1483), Expect = 6e-162, Method: Compositional matrix adjust. Identities = 319/528 (61%), Positives = 373/528 (71%), Gaps = 20/528 (3%) Query 12 SPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALV 71 SP PLA DLRSAD RD PSR D + +AL+ VGGPVGRHALIGRTR TP+RV+ +A+V Sbjct 12 SPAPLAEDLRSADWRDVPSRNDAIVSALSGTVGGPVGRHALIGRTRFFTPMRVILLLAVV 71 Query 72 FLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKS 131 FLA GW KA C+Q G Q +W R Y +CYSDTVPLYGAE L QG FPYK+ Sbjct 72 FLAFGWFAKAGCIQQAPVGESGQVGLDWSGSRQYVAMCYSDTVPLYGAERLDQGAFPYKT 131 Query 132 SWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVV 191 SW E +R DG I +RYMEYPV++G+YQY +M +AK + +++ LP +V Sbjct 132 SWEE--------VRGDGSIQMRYMEYPVISGLYQYGAMKVAKAWDSITW---LPGAIQVA 180 Query 192 MFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSG 251 ++FNV AFGLALAWL TVWA++ LAGRR+WD AL+A SPLVI +FTNFD LAT A G Sbjct 181 LYFNVVAFGLALAWLVTVWASTLLAGRRVWDGALIACSPLVIVHVFTNFDPLATAFAAGG 240 Query 252 LLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLV 311 LLAWAR+RPVLAG+L+GLG AAKLYPLL L PLL+L +RAG+ T +A A WL V Sbjct 241 LLAWARKRPVLAGILLGLGGAAKLYPLLLLGPLLVLCLRAGKTRDWLVTALSAVAAWLAV 300 Query 312 NLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVT 371 NLP+ L+P GW EFFRLN+ RG D DSLYNV+ SFT W+G D L E P LN V Sbjct 301 NLPIAALYPHGWYEFFRLNSERGADPDSLYNVIASFTSWKGLDGPLAQGESPSNLNAVSL 360 Query 372 LLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHR 431 LLFV C + Y+ALTA RPRVAQL FL VA FLL NKVWSPQ+SLWLVPLAVLALPHR Sbjct 361 LLFVAVCIGVGYVALTAQRRPRVAQLCFLLVAGFLLTNKVWSPQYSLWLVPLAVLALPHR 420 Query 432 RILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPG 491 R+LLAWMTIDALVWVPRM Y G ++ LPEQWFT TV++RDIAV+VLC LV+ QIYRP Sbjct 421 RLLLAWMTIDALVWVPRMMYYLGVSNKGLPEQWFTGTVVIRDIAVLVLCALVLRQIYRPS 480 Query 492 RDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDE 539 DLVR G +DDP GGV A D P LP WL+P E Sbjct 481 EDLVRY---------GFIDDPAGGVLDQAPDKQPAWLPGWLKPSKAKE 519 >gi|226309324|ref|YP_002769284.1| hypothetical protein RER_58370 [Rhodococcus erythropolis PR4] gi|226188441|dbj|BAH36545.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=525 Score = 574 bits (1479), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 317/528 (61%), Positives = 371/528 (71%), Gaps = 20/528 (3%) Query 12 SPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALV 71 SP PLA DLRSAD RD PSR D + +AL+ VGGPVGRHALIGRTR TP+RV+ +A+V Sbjct 12 SPAPLAEDLRSADWRDVPSRNDAMVSALSGTVGGPVGRHALIGRTRFFTPMRVILLLAVV 71 Query 72 FLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKS 131 FLA GW KA C+Q G Q +W R Y +CYSDTVPLYGAE L QG FPYK+ Sbjct 72 FLAFGWFAKAGCIQQAPVGESGQVGLDWSGSRQYVAMCYSDTVPLYGAERLDQGAFPYKT 131 Query 132 SWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVV 191 SW E +R DG I +RYMEYPV++G+YQY +M +AK + +++ LP +V Sbjct 132 SWEE--------VRGDGSIQMRYMEYPVISGLYQYGAMKVAKAWDSITW---LPGAIQVA 180 Query 192 MFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSG 251 ++FNV AFGLALAWL TVWA++ LAGRR+WD AL+A SPLVI +FTNFD LAT A G Sbjct 181 LYFNVVAFGLALAWLVTVWASTLLAGRRVWDGALIACSPLVIVHVFTNFDPLATAFAAGG 240 Query 252 LLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLV 311 LLAWAR+RPVLAG+L+GLG AAKLYPLL L PL +L +RAG+ T +A A WL V Sbjct 241 LLAWARKRPVLAGILLGLGGAAKLYPLLLLGPLFVLCLRAGKTRDWLVTALSAVAAWLAV 300 Query 312 NLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVT 371 NLP+ L+P GW EFFRLN+ RG D DSLYNV+ SFT W+G D L E P LN V Sbjct 301 NLPIAALYPHGWYEFFRLNSERGADPDSLYNVIASFTSWKGLDGPLAQGESPSNLNAVSL 360 Query 372 LLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHR 431 LLFV C + Y+ALTA RPRVAQL FL VA FLL NKVWSPQ+SLWLVPLAVLALPHR Sbjct 361 LLFVAVCIGVGYVALTAQRRPRVAQLCFLLVAGFLLTNKVWSPQYSLWLVPLAVLALPHR 420 Query 432 RILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPG 491 R+LLAWMTIDALVWVPRM Y G ++ LPEQWFT TV++RDIAV+VLC LV+ QIYR Sbjct 421 RLLLAWMTIDALVWVPRMMYYLGVSNKGLPEQWFTGTVVIRDIAVLVLCALVLRQIYRQS 480 Query 492 RDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDE 539 DLVR G +DDP GGV A D P LP WL+P E Sbjct 481 EDLVRY---------GFIDDPAGGVLDQAPDKQPAWLPGWLKPSKAKE 519 >gi|54027532|ref|YP_121774.1| hypothetical protein nfa55580 [Nocardia farcinica IFM 10152] gi|54019040|dbj|BAD60410.1| putative membrane protein [Nocardia farcinica IFM 10152] Length=575 Score = 570 bits (1469), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 342/575 (60%), Positives = 395/575 (69%), Gaps = 66/575 (11%) Query 12 SPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALV 71 +P P+AADLRSAD RD PSRTD L A + V+GGPVG HALIGR R TPLRV+FA ++ Sbjct 27 APGPVAADLRSADARDRPSRTDSLTAQASTVIGGPVGDHALIGRVRFWTPLRVLFAFTVI 86 Query 72 FLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKS 131 FLALGW+TKA C+Q T G + +W + R Y +CYSDTVPLYGAE L +G FPYK Sbjct 87 FLALGWATKAGCIQQTEAADGSLTL-DWHDGRQYVAMCYSDTVPLYGAERLDEGAFPYKK 145 Query 132 SWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVV 191 SW+E TP DG VRYMEYPVL+G+YQYL+M +AKT+ AL PLP +VV Sbjct 146 SWVEQ----TP----DGGTEVRYMEYPVLSGLYQYLAMQVAKTWDAL----PLPGALQVV 193 Query 192 MFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSG 251 ++FNV A GLA+AWL TVWA++ LAGRR+WDAALVA SPLVI FTNFDALAT A +G Sbjct 194 IYFNVVAVGLAMAWLVTVWASALLAGRRVWDAALVACSPLVIVHAFTNFDALATAFAATG 253 Query 252 LLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALAR-----TMA---- 302 LLAWARRRP+LAGVL+GLG AAKLYPLL L P+L+L +RA + L R T+A Sbjct 254 LLAWARRRPLLAGVLLGLGGAAKLYPLLLLGPILVLCLRADPMQRLPRPRRVTTLADLDG 313 Query 303 -------------------------------AAAATWLLVNLPVMLLFPRGWSEFFRLNT 331 A ATW++VNLP+ LFP+GW EFFRLNT Sbjct 314 PAAVLDWLRDIPYRVRFLSLRPLGAAAVTVAGALATWVVVNLPIAALFPQGWREFFRLNT 373 Query 332 RRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHR 391 R D DS+YNVV SFTGW GFD L E P VLN V LFVL C AIA++ALTAP R Sbjct 374 TRHADPDSIYNVVTSFTGWTGFDGPLRHGEAPTVLNAVSLALFVLACGAIAWLALTAPRR 433 Query 392 PRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYY 451 PR+AQL FL VA+FLL NKVWSPQ+SLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYY Sbjct 434 PRLAQLCFLVVAAFLLTNKVWSPQYSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYY 493 Query 452 LYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDD 511 G S+ LPEQWFT TV+LRD+AV+ LC L+V QI+RP DLVR G DD Sbjct 494 YLGTGSKGLPEQWFTGTVVLRDLAVIGLCALIVRQIFRPDEDLVRR---------DGADD 544 Query 512 PVGGVFANAADAPPGRLPSWLRPRLGDEHARERTP 546 PVGGV +A D LP+WLRPR A RTP Sbjct 545 PVGGVLDHAPDPLLPWLPTWLRPR----DAPARTP 575 >gi|226362647|ref|YP_002780425.1| hypothetical protein ROP_32330 [Rhodococcus opacus B4] gi|226241132|dbj|BAH51480.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=536 Score = 559 bits (1441), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 322/543 (60%), Positives = 384/543 (71%), Gaps = 24/543 (4%) Query 7 QSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMF 66 +++++SP PLA D RSAD RD P RTD L A L+ V+GGPVGRHA++GR+R TP+R + Sbjct 15 ETNSVSPAPLAKDRRSADWRDLPGRTDPLTADLSGVIGGPVGRHAVVGRSRFFTPMRAIL 74 Query 67 AIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGK 126 +A+VFLALGW KA C+Q G +W R Y +CYSDTVPLYGAE L++G Sbjct 75 LLAIVFLALGWFAKAPCIQQAPVGENGALGLDWSGSRQYVAMCYSDTVPLYGAERLNEGA 134 Query 127 FPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPV 186 FPYK W E NG QI RYMEYPV++G+YQY +M IAK++ A V LP Sbjct 135 FPYKKWWEEQAGNG--------QIQRRYMEYPVISGLYQYGAMTIAKSWDA---VRWLPG 183 Query 187 VAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATG 246 +V ++FNV AFGLALAWL TVWA++ LAGRRIWDAAL+AASPLVI FTNFD LAT Sbjct 184 ALQVAIYFNVVAFGLALAWLVTVWASALLAGRRIWDAALIAASPLVIVHAFTNFDPLATA 243 Query 247 LATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAA 306 A GLLAW+R+RPVLAG+L+GLG AAKLYPLL L PLL+L +R G++ + T Sbjct 244 FAAGGLLAWSRKRPVLAGILLGLGGAAKLYPLLLLGPLLVLCLRTGKVRDWSVTALTGVG 303 Query 307 TWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVL 366 W+ VNLP+ +LFPRGW+EFFRLN+ RG D DS+YNV+ SFTGW GFD L E P VL Sbjct 304 AWVAVNLPIAVLFPRGWAEFFRLNSERGADPDSVYNVISSFTGWTGFDGVLSAGEAPTVL 363 Query 367 NTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVL 426 N V LLF L CA I Y+ALTAP RPR+ QL FL VA FLL NKVWSPQ+SLWLVPLAVL Sbjct 364 NAVSFLLFALVCAGIGYVALTAPRRPRLTQLCFLLVAGFLLTNKVWSPQYSLWLVPLAVL 423 Query 427 ALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQ 486 A PHRRILLAWMTIDALVWVPRM+Y G ++ LPEQWFT V++RD+AV+V+C L+V Q Sbjct 424 AFPHRRILLAWMTIDALVWVPRMFYYLGVSNKGLPEQWFTAAVVVRDVAVVVICALIVRQ 483 Query 487 IYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARERTP 546 IYRPG DLVR G +DD GGV A DA P LP WLRPR+ E TP Sbjct 484 IYRPGEDLVRY---------GFIDDMAGGVLDQAPDAQPRWLPDWLRPRV----RVEATP 530 Query 547 DAG 549 +G Sbjct 531 ASG 533 >gi|312141937|ref|YP_004009273.1| integral membrane protein [Rhodococcus equi 103S] gi|311891276|emb|CBH50597.1| putative integral membrane protein [Rhodococcus equi 103S] Length=519 Score = 555 bits (1430), Expect = 7e-156, Method: Compositional matrix adjust. Identities = 327/526 (63%), Positives = 379/526 (73%), Gaps = 20/526 (3%) Query 11 ISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIAL 70 +SP PLAAD RSAD RD P TD L + LA+ +GGPVGRHALIGRTR TP+RV+ +A+ Sbjct 2 VSPAPLAADRRSADWRDVPGHTDPLTSKLASTIGGPVGRHALIGRTRFFTPMRVILLLAV 61 Query 71 VFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYK 130 VFLALGW TKA C+Q G +W R Y +CYSDTVPLYGAE L +G FPYK Sbjct 62 VFLALGWFTKAGCIQQAPVGADGALGLDWSGNRQYVAMCYSDTVPLYGAEHLDEGAFPYK 121 Query 131 SSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEV 190 W E R DG I RYMEYPVL+G+YQY SM +AK + A LP +V Sbjct 122 KWWEEP--------RSDGSIQQRYMEYPVLSGLYQYGSMVVAKAWDATPW---LPGGLQV 170 Query 191 VMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATS 250 ++FNV AFGLA+AWL TVWA++ LAGRR+WDAALVA SPLVI FTNFD LAT A Sbjct 171 AIYFNVVAFGLAMAWLVTVWASALLAGRRVWDAALVACSPLVIVHAFTNFDPLATAFAMG 230 Query 251 GLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLL 310 GLLAWAR+RPVLAG+L+GLG AAKL+PL+ L PLL+L +R+GR+ A R AAAA WL+ Sbjct 231 GLLAWARKRPVLAGILLGLGGAAKLFPLMLLGPLLVLCLRSGRMRAWTRATLAAAAAWLV 290 Query 311 VNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVV 370 VNLP+ LLFPRGW+EFFRLN+ RG D DS+YNV+ SFTGW GFD L E P VLN V Sbjct 291 VNLPIALLFPRGWAEFFRLNSERGADPDSIYNVIASFTGWTGFDGPLAPGESPSVLNAVT 350 Query 371 TLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPH 430 LLF C I Y+ALTAP RPRVAQL FL VA FLL NKVWSPQ+SLWLVPLAVLALPH Sbjct 351 LLLFAAVCVGIGYVALTAPRRPRVAQLCFLLVAGFLLTNKVWSPQYSLWLVPLAVLALPH 410 Query 431 RRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRP 490 RRILLAWMTIDALVWVPRM Y G ++ LPE+WFT V++RD+AV+ LC LV+ QIYRP Sbjct 411 RRILLAWMTIDALVWVPRMMYYLGVSNKGLPEEWFTGAVVVRDLAVVALCVLVLRQIYRP 470 Query 491 GRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRL 536 DLVR G +DDP GGV A DAPP LP+WLRP++ Sbjct 471 ADDLVR---------FGFIDDPAGGVLDQAEDAPPRWLPAWLRPKV 507 >gi|111020429|ref|YP_703401.1| hypothetical protein RHA1_ro03440 [Rhodococcus jostii RHA1] gi|110819959|gb|ABG95243.1| possible membrane protein [Rhodococcus jostii RHA1] Length=534 Score = 554 bits (1427), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 316/529 (60%), Positives = 373/529 (71%), Gaps = 20/529 (3%) Query 7 QSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMF 66 ++ +SP PLA D RSAD RD P RTD L A L+ V+GGPVGRHA++GR+R TP+R + Sbjct 15 ETGFVSPAPLAKDRRSADWRDLPGRTDPLTADLSGVIGGPVGRHAVVGRSRFFTPMRAIL 74 Query 67 AIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGK 126 +A+VFLALGW KA C+Q G +W R Y +CYSDTVPLYGAE L++G Sbjct 75 LLAIVFLALGWFAKAPCIQQAPVGENGALGLDWSGSRQYVAMCYSDTVPLYGAERLNEGA 134 Query 127 FPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPV 186 FPYK W E NG Q RYMEYPV++G+YQY +M IAK++ A V LP Sbjct 135 FPYKKWWEEDAGNG--------QTQRRYMEYPVISGLYQYGAMTIAKSWDA---VHWLPG 183 Query 187 VAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATG 246 +V ++FNV A GLALAWL TVWA++ LAGRRIWDAAL+A SPLVI FTNFD LAT Sbjct 184 ALQVAIYFNVVALGLALAWLVTVWASALLAGRRIWDAALIAVSPLVIVHAFTNFDPLATA 243 Query 247 LATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAA 306 A GLLAW+R+RPVLAG+L+GLG AAKLYPLL L PLL+L +R G++ + T Sbjct 244 FAAGGLLAWSRKRPVLAGILLGLGGAAKLYPLLLLGPLLVLCLRTGKVREWSVTALTGIG 303 Query 307 TWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVL 366 WL VNLP+ LLFPRGW+EFFRLN+ RG D DS+YNV+ SFTGW GFD L + P VL Sbjct 304 AWLTVNLPIALLFPRGWAEFFRLNSERGADPDSVYNVISSFTGWTGFDGILSAGQAPTVL 363 Query 367 NTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVL 426 N V +LF L C I YIALTAP RPR+ QL FL VA FLL NKVWSPQ+SLWLVPLAVL Sbjct 364 NAVSFMLFALVCVGIGYIALTAPRRPRLTQLCFLLVAGFLLTNKVWSPQYSLWLVPLAVL 423 Query 427 ALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQ 486 A PHRRILLAWMTIDALVWVPRM+Y G + LPEQWFT V++RDIAV+V+C L++ Q Sbjct 424 AFPHRRILLAWMTIDALVWVPRMFYYLGVADKGLPEQWFTAAVVVRDIAVVVICALIIRQ 483 Query 487 IYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPR 535 IYRPG DLVR G +DDP GGV A DA P LP+WLRPR Sbjct 484 IYRPGEDLVRY---------GFIDDPAGGVLDQAPDAQPQWLPAWLRPR 523 >gi|325672808|ref|ZP_08152502.1| transmembrane protein [Rhodococcus equi ATCC 33707] gi|325556061|gb|EGD25729.1| transmembrane protein [Rhodococcus equi ATCC 33707] Length=535 Score = 553 bits (1426), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 328/526 (63%), Positives = 377/526 (72%), Gaps = 20/526 (3%) Query 11 ISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIAL 70 +SP PLAAD RSAD RD P TD L + LA+ +GGPVGRHALIGRTR TP+RV+ +A+ Sbjct 18 VSPAPLAADRRSADWRDVPGHTDPLTSKLASTIGGPVGRHALIGRTRFFTPMRVILLLAV 77 Query 71 VFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYK 130 VFLALGW TKA C+Q G +W R Y +CYSDTVPLYGAE L +G FPYK Sbjct 78 VFLALGWFTKAGCIQQAPVGADGALGLDWRGNRQYVAMCYSDTVPLYGAEHLDEGAFPYK 137 Query 131 SSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEV 190 W E R DG I RYMEYPVL+G+YQY SM IAK + A LP +V Sbjct 138 KWWEEP--------RSDGSIQQRYMEYPVLSGLYQYGSMVIAKAWDATPW---LPGGLQV 186 Query 191 VMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATS 250 ++FNV AFGLA+AWL TVWA++ LAGRR+WDAALVA SPLVI FTNFD LAT A Sbjct 187 AIYFNVVAFGLAMAWLVTVWASALLAGRRVWDAALVACSPLVIVHAFTNFDPLATAFAMG 246 Query 251 GLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLL 310 GLLAWARRRPVLAG+L+GLG AAKL+PL+ L PLL+L +R+GR+ R AAAA WL+ Sbjct 247 GLLAWARRRPVLAGILLGLGGAAKLFPLMLLGPLLVLCLRSGRMRDWTRATLAAAAAWLV 306 Query 311 VNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVV 370 VNLP+ LLFPRGW+EFFRLN+ RG D DS+YNV+ SFTGW GFD L E P VLN V Sbjct 307 VNLPIALLFPRGWAEFFRLNSERGADPDSIYNVIASFTGWTGFDGPLAPGESPSVLNVVT 366 Query 371 TLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPH 430 LLF C I Y+ALTAP RPRVAQL FL VA FLL NKVWSPQ+SLWLVPLAVLALPH Sbjct 367 LLLFAAVCVGIGYVALTAPRRPRVAQLCFLLVAGFLLTNKVWSPQYSLWLVPLAVLALPH 426 Query 431 RRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRP 490 RRILLAWMTIDALVWVPRM Y G ++ LPE+WFT V++RD+AV+ LC LV+ QIYRP Sbjct 427 RRILLAWMTIDALVWVPRMMYYLGVSNKGLPEEWFTGAVVVRDLAVVALCVLVLRQIYRP 486 Query 491 GRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRL 536 DLVR G +DDP GGV A DAPP LP WLRP++ Sbjct 487 ADDLVR---------FGFIDDPAGGVLDQAEDAPPRWLPPWLRPKV 523 >gi|333922192|ref|YP_004495773.1| hypothetical protein AS9A_4541 [Amycolicicoccus subflavus DQS3-9A1] gi|333484413|gb|AEF42973.1| Putative membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=496 Score = 551 bits (1419), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 296/509 (59%), Positives = 365/509 (72%), Gaps = 19/509 (3%) Query 39 LANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVAN 98 L+ V+GGPVG+HALIGR R +TPLRV+ IA+ +ALGW KAAC+Q GP + + Sbjct 4 LSTVIGGPVGKHALIGRARFLTPLRVVLVIAVAIMALGWLGKAACIQQYPGGPDGAQTID 63 Query 99 WDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYP 158 W + R Y LCYSDTVPLYG L+Q FPYK++ +E ++ DG I RYMEYP Sbjct 64 WRDGRQYVALCYSDTVPLYGVHRLNQLAFPYKTA-LEQEAA-------DGSITTRYMEYP 115 Query 159 VLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGR 218 VLTG+YQ+ + AI ++ ++ LP VV++FNV+A GLALAWL TVWAT+ LAGR Sbjct 116 VLTGLYQFAAAAIGSVWSEGARAGLLPGALPVVVYFNVSAVGLALAWLVTVWATALLAGR 175 Query 219 RIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPL 278 RIWDAALVA SPLVI +FTNFDA+AT A + LLAW+R++P+LAGVL+GLG+AAKLYPL Sbjct 176 RIWDAALVAISPLVIVHLFTNFDAIATAFAATALLAWSRKKPMLAGVLLGLGTAAKLYPL 235 Query 279 LFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMD 338 L L+L IR+ L + + +A AATWL +NLP+ +L+P GW+EFFRLN RG D D Sbjct 236 FILGAFLVLAIRSATLRSWLQAVATTAATWLAINLPIAMLYPNGWNEFFRLNRERGMDPD 295 Query 339 SLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLT 398 S+YNV+++FTGW+GFD L E P +LN V LLF+L CA + YIALTAP RPRVAQL Sbjct 296 SIYNVIRTFTGWQGFDGPLLPGESPSILNLVSLLLFLLVCAGVGYIALTAPRRPRVAQLC 355 Query 399 FLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSR 458 FL VA FLL NKVWSPQ+SLWLVPLAVLALPH RILLAWM +DALVW PRM Y +G ++ Sbjct 356 FLLVAGFLLTNKVWSPQYSLWLVPLAVLALPHIRILLAWMAVDALVWAPRMMYYHGISNK 415 Query 459 SLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFA 518 LPEQWFT TV++RD+AV+ LC L++ QIYRP DLVR GVDDPVGGV Sbjct 416 GLPEQWFTATVVVRDLAVLALCALIIRQIYRPQEDLVRQ---------HGVDDPVGGVIT 466 Query 519 NAADAPPGRLPSWLRPRLGDEHARERTPD 547 DAPP LP WL PR +R+R P+ Sbjct 467 GKPDAPPRWLPKWLHPR--GHQSRQRQPE 493 >gi|134103775|ref|YP_001109436.1| hypothetical protein SACE_7355 [Saccharopolyspora erythraea NRRL 2338] gi|133916398|emb|CAM06511.1| possible membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=540 Score = 479 bits (1234), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 276/524 (53%), Positives = 342/524 (66%), Gaps = 18/524 (3%) Query 4 ALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLR 63 A +++S + D +R P+ T+ + L+ GGP+GRHA +GR TPLR Sbjct 8 ASTETSEPVSAAVDGDSLGPADRVAPTWTESVALRLSRPFGGPLGRHAQVGRQWFWTPLR 67 Query 64 VMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYG-AELL 122 V+ +A + LA G+ KA CLQ+ T G Q +W N R Y +CY+D +P YG +L Sbjct 68 VVLLLATLTLAAGFLFKAPCLQTYDTKNGQQ--LDWRNSRQYTAMCYTDIIPRYGMGDLA 125 Query 123 SQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVA 182 G FPYK++W+E GTPQ + VRYMEYPVLTG++Q+++ IA ++ L+ + Sbjct 126 PDGVFPYKTAWLE--RAGTPQEK------VRYMEYPVLTGLFQWVNAKIADGWSTLASMG 177 Query 183 PLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDA 242 LP + V++FNV+ F L AWLTTVWA L RR+WDAAL A SPL +FTNFDA Sbjct 178 WLPAMMITVLYFNVSVFWLTAAWLTTVWALVMLCRRRVWDAALAAVSPLAFVHVFTNFDA 237 Query 243 LATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMA 302 LAT T+GLLAW+RRRPVLAGVLIGLG AAKLYPL FL PLL+L +R+GRL T+ Sbjct 238 LATAFGTAGLLAWSRRRPVLAGVLIGLGGAAKLYPLFFLGPLLVLCLRSGRLREGMHTLL 297 Query 303 AAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEP 362 AAA +WL VNLP++LL+P GW EFFRLN R D DSLYN + FTGW GFD L + Sbjct 298 AAAVSWLAVNLPILLLYPTGWREFFRLNAERPADPDSLYNALSYFTGWPGFDGPLASGQA 357 Query 363 PLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVP 422 P+VLN V LFVL CA IA++AL AP RPR+AQL FL VA FLL NKVWSPQ+SLWLVP Sbjct 358 PVVLNLVSGALFVLACAGIAWLALAAPVRPRLAQLCFLVVAVFLLTNKVWSPQYSLWLVP 417 Query 423 LAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGL 482 LAVLA+P R+LL+WM +DALVW PRMYY G ++ LPE WF V+LRD V+ LC L Sbjct 418 LAVLAIPRWRLLLSWMLVDALVWAPRMYYYLGTGNKGLPEGWFLGAVVLRDAVVVALCVL 477 Query 483 VVWQIYRPGRDLVRTG----GPGALPACGGVDDPVGGVFANAAD 522 VV +I P RD VRT G P DDP GG A D Sbjct 478 VVREILDPARDRVRTTLALRGNRTAPVA---DDPCGGFLDGARD 518 >gi|291007698|ref|ZP_06565671.1| hypothetical protein SeryN2_24504 [Saccharopolyspora erythraea NRRL 2338] Length=521 Score = 478 bits (1230), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 273/503 (55%), Positives = 335/503 (67%), Gaps = 18/503 (3%) Query 25 NRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACL 84 +R P+ T+ + L+ GGP+GRHA +GR TPLRV+ +A + LA G+ KA CL Sbjct 10 DRVAPTWTESVALRLSRPFGGPLGRHAQVGRQWFWTPLRVVLLLATLTLAAGFLFKAPCL 69 Query 85 QSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYG-AELLSQGKFPYKSSWIETDSNGTPQ 143 Q+ T G Q +W N R Y +CY+D +P YG +L G FPYK++W+E GTPQ Sbjct 70 QTYDTKNGQQ--LDWRNSRQYTAMCYTDIIPRYGMGDLAPDGVFPYKTAWLE--RAGTPQ 125 Query 144 LRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLAL 203 + VRYMEYPVLTG++Q+++ IA ++ L+ + LP + V++FNV+ F L Sbjct 126 EK------VRYMEYPVLTGLFQWVNAKIADGWSTLASMGWLPAMMITVLYFNVSVFWLTA 179 Query 204 AWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLA 263 AWLTTVWA L RR+WDAAL A SPL +FTNFDALAT T+GLLAW+RRRPVLA Sbjct 180 AWLTTVWALVMLCRRRVWDAALAAVSPLAFVHVFTNFDALATAFGTAGLLAWSRRRPVLA 239 Query 264 GVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGW 323 GVLIGLG AAKLYPL FL PLL+L +R+GRL T+ AAA +WL VNLP++LL+P GW Sbjct 240 GVLIGLGGAAKLYPLFFLGPLLVLCLRSGRLREGMHTLLAAAVSWLAVNLPILLLYPTGW 299 Query 324 SEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAY 383 EFFRLN R D DSLYN + FTGW GFD L + P+VLN V LFVL CA IA+ Sbjct 300 REFFRLNAERPADPDSLYNALSYFTGWPGFDGPLASGQAPVVLNLVSGALFVLACAGIAW 359 Query 384 IALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDAL 443 +AL AP RPR+AQL FL VA FLL NKVWSPQ+SLWLVPLAVLA+P R+LL+WM +DAL Sbjct 360 LALAAPVRPRLAQLCFLVVAVFLLTNKVWSPQYSLWLVPLAVLAIPRWRLLLSWMLVDAL 419 Query 444 VWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTG----G 499 VW PRMYY G ++ LPE WF V+LRD V+ LC LVV +I P RD VRT G Sbjct 420 VWAPRMYYYLGTGNKGLPEGWFLGAVVLRDAVVVALCVLVVREILDPARDRVRTTLALRG 479 Query 500 PGALPACGGVDDPVGGVFANAAD 522 P DDP GG A D Sbjct 480 NRTAPVA---DDPCGGFLDGARD 499 >gi|296141856|ref|YP_003649099.1| hypothetical protein Tpau_4191 [Tsukamurella paurometabola DSM 20162] gi|296029990|gb|ADG80760.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=552 Score = 465 bits (1197), Expect = 9e-129, Method: Compositional matrix adjust. Identities = 302/536 (57%), Positives = 353/536 (66%), Gaps = 25/536 (4%) Query 25 NRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACL 84 +RD PS TD + A +GGPVG HALIG R TPLR++ +A++FLALGW+TKA CL Sbjct 29 DRDIPSHTDPVARDFAAALGGPVGAHALIGFQRFFTPLRLILLVAVLFLALGWTTKAGCL 88 Query 85 QSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQL 144 Q G V +W R Y +CYSDTVPLY AE L +G PYK+ + +TD G PQ Sbjct 89 QQKNDG--GSLVLDWSANRPYTAMCYSDTVPLYSAERLDEGLMPYKTQFFDTDPLGQPQ- 145 Query 145 RYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALA 204 RYMEYPVLTG+YQY+SM IAK +T L + +P EVV+FF VAA GLAL Sbjct 146 -------ERYMEYPVLTGMYQYVSMRIAKLWTYLHEEWGVPAAIEVVLFFTVAAVGLALF 198 Query 205 WLTTVWATSGL--AGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVL 262 WL VWAT+ L AGRR WDA LVAASPLVI FTNFDA+A LL WAR RP Sbjct 199 WLIAVWATTLLSGAGRRPWDAMLVAASPLVIVHAFTNFDAIAVAATAVALLLWARNRPAW 258 Query 263 AGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRG 322 AGV+IGLG+AAKLYP L LLLL +RAG L + A A+AAA WL VNLPV+ L+P+G Sbjct 259 AGVVIGLGAAAKLYPAFLLVVLLLLCLRAGLLRSWATAAASAAAAWLAVNLPVLALWPQG 318 Query 323 WSEFFRLNTRRGDDMDSLYNVVKSFTG---WRGFDPTLGFWEPPLVLNTVVTLLFVLCCA 379 W EFF N+ R DMDS+Y V+ SFTG + G P G + N + LFVL A Sbjct 319 WWEFFHRNSIRAVDMDSIYAVISSFTGGWVFGGQGPRGG---ASTLANMITLGLFVLVIA 375 Query 380 AIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMT 439 +AY+AL AP RPRVAQL FL VA FLLVNKVWSPQ+SLWLVPLAVLALPH RILLAWMT Sbjct 376 GVAYLALKAPRRPRVAQLAFLLVAGFLLVNKVWSPQYSLWLVPLAVLALPHTRILLAWMT 435 Query 440 IDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGG 499 IDALVWVPRM Y G ++ LPEQ FT TVLLRDIAV+ LC LV+ QIY+P DLVR+ Sbjct 436 IDALVWVPRMMYFLGVSNKGLPEQAFTFTVLLRDIAVIGLCALVIRQIYKPDEDLVRSTF 495 Query 500 PGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLG--DEHARERTPDAGRDRT 553 PG P +DDP GG A D P L LR R G + R+ + A R +T Sbjct 496 PG--PFSPPLDDPAGGPLDGAPDVP---LSESLRSRSGRPGRYQRKNSSIAARPQT 546 >gi|257057872|ref|YP_003135704.1| putative integral membrane protein [Saccharomonospora viridis DSM 43017] gi|256587744|gb|ACU98877.1| predicted integral membrane protein [Saccharomonospora viridis DSM 43017] Length=535 Score = 456 bits (1172), Expect = 7e-126, Method: Compositional matrix adjust. Identities = 279/518 (54%), Positives = 346/518 (67%), Gaps = 20/518 (3%) Query 6 SQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVM 65 S S + P A L A R PS +D L A+ VGGP+GRHA +GR TPLRV Sbjct 5 SYGSQQTSTPDTASL-DASQRVIPSWSDPLAEAVTRPVGGPLGRHAAVGRHWFWTPLRVC 63 Query 66 FAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQ- 124 +A++ L GW KAAC+Q T GD + +W + R Y +CYSD VPLY AE L + Sbjct 64 LLLAVLGLTAGWFGKAACIQQYVTEQGDIEL-DWRSGRQYVAMCYSDIVPLYTAERLDED 122 Query 125 GKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPL 184 G FPY +SW+E + Q VRYMEYPVL+G++Q+++ +A + ++ L Sbjct 123 GTFPYATSWVENEGTEYEQ--------VRYMEYPVLSGLFQWVNAKLAHGWDDAAESGWL 174 Query 185 PVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALA 244 P VV++FN+ AF L+ AWL TVWA + A RIWDAALVA SPLV+ FTNFDALA Sbjct 175 PGALPVVVYFNITAFFLSAAWLITVWAVARTARHRIWDAALVAVSPLVVVHAFTNFDALA 234 Query 245 TGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAA 304 T A +GLLAWARR+PVLAGVL+G+G+AAKLYPL FL PLL+L +RA RL ART AA Sbjct 235 TAAAATGLLAWARRKPVLAGVLLGVGAAAKLYPLFFLGPLLVLCVRAQRLKVWARTAGAA 294 Query 305 AATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPL 364 A TW +NLP M+ GW+EFFRLNT+R D DSLYNV+ FTGW+GFD LG E P Sbjct 295 ATTWAALNLPFMVFLREGWAEFFRLNTQRDMDPDSLYNVISYFTGWQGFDGPLGPGESPA 354 Query 365 VLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLA 424 +LN V LF+ C IAY+AL+AP RPRVAQL FL VA+FLL NKVWSPQ+SLWLVPLA Sbjct 355 ILNAVSGALFLALCGGIAYVALSAPRRPRVAQLCFLVVAAFLLTNKVWSPQYSLWLVPLA 414 Query 425 VLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVV 484 VLA+P R+LL WM +DALVW PRM+Y G ++ LPE WF TV++RD+ V++LC L++ Sbjct 415 VLAIPRWRLLLGWMVVDALVWAPRMFYYLGVSNKGLPEGWFLGTVVVRDVVVVLLCVLIL 474 Query 485 WQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAAD 522 +IYRP +D VR GVDDPVGGV A D Sbjct 475 REIYRPAQDAVRV---------HGVDDPVGGVLDGAED 503 >gi|256381013|ref|YP_003104673.1| integral membrane protein [Actinosynnema mirum DSM 43827] gi|255925316|gb|ACU40827.1| putative integral membrane protein [Actinosynnema mirum DSM 43827] Length=519 Score = 453 bits (1166), Expect = 3e-125, Method: Compositional matrix adjust. Identities = 270/506 (54%), Positives = 341/506 (68%), Gaps = 20/506 (3%) Query 19 DLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWS 78 D + + R P+ T+ L L+ GGP GRHA +GR TPLRV+ + LV L+L + Sbjct 16 DSLTPEERVHPTWTESLARGLSRPFGGPAGRHASLGRQWFWTPLRVVLLLTLVTLSLAFL 75 Query 79 TKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQ-GKFPYKSSWIETD 137 K+ C+Q G ++ +W + Y +CYSDT+PLY AE L Q G FPYK+ W D Sbjct 76 QKSPCIQQYVDSNGVVQL-DWRGGKQYTAMCYSDTIPLYTAERLDQPGMFPYKTHWF--D 132 Query 138 SNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSK-VAPLPVVAEVVMFFNV 196 G P +RYMEYPVLTG++Q+++ +A+ +TA+++ LP V+++F+ Sbjct 133 DQGKPTEH------IRYMEYPVLTGLFQWVNARMAQGWTAIAESTGLLPSPMTVIVYFDF 186 Query 197 AAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWA 256 A L LAWL T WAT +A RR WDAALVA SPLV+ FTNFD LAT AT+G+LAWA Sbjct 187 TALWLGLAWLVTAWATLRIARRRPWDAALVAVSPLVLVHAFTNFDTLATAFATAGMLAWA 246 Query 257 RRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVM 316 R +PVLAGVLIGLG+AAKLYPL L PL+LL R+G++ T+ AAA WL VNLPV Sbjct 247 RSKPVLAGVLIGLGAAAKLYPLFLLGPLVLLCFRSGKMREALNTVLAAALAWLAVNLPVR 306 Query 317 LLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVL 376 L +P GW EFFRLNT RG D D++YNV+ +TGW GFDP LGF EPP VLN V LF+L Sbjct 307 LAYPEGWGEFFRLNTLRGVDPDTVYNVLVQWTGWTGFDPGLGFREPPAVLNAVTAALFLL 366 Query 377 CCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLA 436 CCA IA +AL+AP RPR+AQL FL VA+FLL NKVWSPQ+SLWLVPLAVLA+P ++LLA Sbjct 367 CCAGIAVVALSAPTRPRLAQLCFLVVAAFLLTNKVWSPQYSLWLVPLAVLAVPRWKLLLA 426 Query 437 WMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVR 496 WMT+DALVWVPRM++ G ++ LP WF VLLRD AV++LC +V+ +IY+P DLVR Sbjct 427 WMTVDALVWVPRMFFYLGEENKGLPIDWFLGAVLLRDAAVLLLCVVVLREIYKPSLDLVR 486 Query 497 TGGPGALPACGGVDDPVGGVFANAAD 522 G DDP GGV A D Sbjct 487 VSGD---------DDPAGGVLDGAPD 503 >gi|262204548|ref|YP_003275756.1| integral membrane protein-like protein [Gordonia bronchialis DSM 43247] gi|262087895|gb|ACY23863.1| integral membrane protein-like protein [Gordonia bronchialis DSM 43247] Length=586 Score = 453 bits (1166), Expect = 3e-125, Method: Compositional matrix adjust. Identities = 271/549 (50%), Positives = 341/549 (63%), Gaps = 36/549 (6%) Query 11 ISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIAL 70 +SP ++ADLR D+R PS TD L ++VVGGP G HA++GR+R +TP+RV+F +AL Sbjct 26 VSPTRMSADLRVDDDRIRPSHTDGLVREASSVVGGPSGAHAVVGRSRHLTPVRVLFGLAL 85 Query 71 VFLALGWSTKAACLQS------TGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQ 124 + LAL W KA CLQ T PG +WDNQR + LCYSD + LYGAE L+ Sbjct 86 ITLALSWFGKAGCLQQAEPDDGTAGQPGAVMRLDWDNQRQFTDLCYSDVISLYGAERLND 145 Query 125 GKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPL 184 G PY+ W + D G Q++ RYMEYPVLTG+Y Y + +A + ++ + Sbjct 146 GALPYRDYWYQDDGTGK-QIK-------RYMEYPVLTGMYMYGAARLAGWWGWANEHWGV 197 Query 185 PVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALA 244 P +VVMFFN+ A GLAL WL T+WAT+ A R+W L A SPLV+ FTNFDA+A Sbjct 198 PGALDVVMFFNLVALGLALFWLVTIWATALTARTRMWSVWLAALSPLVLVHAFTNFDAIA 257 Query 245 TGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAA 304 T L LLAW+RR+P LAGV +GLG+AAKLYP L L +L +RAG++ A A A Sbjct 258 TALVALALLAWSRRQPWLAGVCLGLGTAAKLYPALLLVVFAVLCLRAGKMREFAVLAATA 317 Query 305 AATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPL 364 +WLLVNLPV++ +P GW EFFR NT RG D DS Y V+ G+ W L Sbjct 318 VGSWLLVNLPVLIPYPSGWREFFRFNTDRGADPDSWYRVLSDIGGFT--------WNIDL 369 Query 365 VLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLA 424 + + LL VL A+ I L AP+RPRVAQL FL VA FLLVNKVWSPQ+SLWLVPLA Sbjct 370 LNGLTMLLL-VLVIGAVIAIGLLAPYRPRVAQLAFLLVAGFLLVNKVWSPQYSLWLVPLA 428 Query 425 VLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVV 484 VLALPH R+LL+WM IDAL+W+PRM R LP++WFT V+LR + V++LCG+V+ Sbjct 429 VLALPHTRLLLSWMVIDALLWIPRMGLFLDADRRWLPDEWFTGAVILRGLMVIMLCGVVI 488 Query 485 WQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARER 544 WQI+ P DLVR G G DDP GGV D P RL S R+ + R Sbjct 489 WQIWHPTEDLVRQRRLG-----GYYDDPAGGVL----DGAPDRLGS----RVVADVGANR 535 Query 545 TPDAGRDRT 553 DAG D T Sbjct 536 PHDAGDDGT 544 >gi|343928606|ref|ZP_08768051.1| hypothetical protein GOALK_120_00340 [Gordonia alkanivorans NBRC 16433] gi|343761355|dbj|GAA14977.1| hypothetical protein GOALK_120_00340 [Gordonia alkanivorans NBRC 16433] Length=554 Score = 436 bits (1120), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 256/517 (50%), Positives = 321/517 (63%), Gaps = 28/517 (5%) Query 12 SPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALV 71 SP PLA D R R P+R+D L +++VGGP G HA+IGR+R +TPLRV+FA+AL Sbjct 32 SPAPLARDERVDAERVLPTRSDNLVREASSLVGGPAGAHAVIGRSRHLTPLRVLFALALC 91 Query 72 FLALGWSTKAACLQS------TGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQG 125 LALGW KA+CLQ + PG + +WD+QR + LCYSD + LYGAE L+ G Sbjct 92 GLALGWFGKASCLQQAPPDDGSAGRPGAEMRLDWDDQRQFTNLCYSDVISLYGAERLNIG 151 Query 126 KFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLP 185 PY+ W + D+ G Q RYMEYPVLTG++ Y + + + + + +P Sbjct 152 ALPYRDFWFQEDAGG--------QTIKRYMEYPVLTGMFMYGAAQLTRGWVWAEENWGVP 203 Query 186 VVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALAT 245 +VV+FF + A GLAL WL T+WAT+ A R+W L A SPLV FTNFD +AT Sbjct 204 GALDVVLFFTIVALGLALFWLVTIWATALTARTRMWAVWLAALSPLVFVHAFTNFDTIAT 263 Query 246 GLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAA 305 LLAW+R RP +AGV IG+G+AAKLYP L L L L +R+GR+ T AAA Sbjct 264 AAVAVALLAWSRDRPWIAGVAIGVGAAAKLYPALLLVVLGALCLRSGRVREFGATAAAAL 323 Query 306 ATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLV 365 WLLVNLP+++ +P GW EFFR N R D D++Y ++ TLGF Sbjct 324 TAWLLVNLPILIPYPTGWWEFFRFNGDRSADADTIYRILAD---------TLGFTWNINH 374 Query 366 LNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAV 425 LN + L VL A+A I L AP RPRVAQL FL VA FLLVNKVWSPQ+SLWLVPLAV Sbjct 375 LNALSVGLTVLVLVAVALIGLCAPFRPRVAQLAFLAVAGFLLVNKVWSPQYSLWLVPLAV 434 Query 426 LALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVW 485 LA+PH R+LL WMTIDAL+W+PRM R LP+QWFTT V+LR + V+VLC +V+W Sbjct 435 LAIPHTRLLLTWMTIDALIWIPRMGLFLDQERRWLPDQWFTTAVVLRGLIVIVLCAVVIW 494 Query 486 QIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAAD 522 QI+ P DLVR G G DDP GGV A D Sbjct 495 QIWHPKDDLVRAGNDGRW-----YDDPAGGVLDGAPD 526 >gi|300791090|ref|YP_003771381.1| hypothetical protein AMED_9291 [Amycolatopsis mediterranei U32] gi|299800604|gb|ADJ50979.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length=516 Score = 431 bits (1108), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 252/519 (49%), Positives = 320/519 (62%), Gaps = 20/519 (3%) Query 5 LSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRV 64 + + + P P L A+ R PS + L AA+ +GGP+G HA +GR +P RV Sbjct 1 MPEETTREPEPGPVTLTRAE-RIVPSWNEPLAAAVTRPLGGPLGEHAAVGRHWFWSPQRV 59 Query 65 MFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQ 124 +A + L L W K +C+Q G ++ +W R + +CYSD VPLYG+E L + Sbjct 60 GLLLATLALMLCWFGKGSCIQQYQDSSGATQL-DWRAGRPFVAMCYSDIVPLYGSERLDR 118 Query 125 -GKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAP 183 FPY +SW E+ + RYMEYPVLTG++Q+ + +A + +++ Sbjct 119 PATFPYYTSWKESSQTA--------ENNTRYMEYPVLTGLFQWANAKLAAGWLNVAETGW 170 Query 184 LPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDAL 243 LP V ++F++ AF LA+AWL TVWAT RR WD LVA SPLV+ FTNFDA+ Sbjct 171 LPGALPVAIYFDITAFFLAVAWLVTVWATGRTMRRRPWDMVLVAISPLVLVHAFTNFDAI 230 Query 244 ATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAA 303 AT +GLLAWAR+RP+LAGVL+GLG+ AKLYPL L L L +RAG+L +T A Sbjct 231 ATAFTATGLLAWARKRPLLAGVLLGLGATAKLYPLFLLGVLFALCLRAGKLTPFWKTAGA 290 Query 304 AAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPP 363 A TWL VN P +L RGW EFFR++ R D DSLYNV +GW GFD L + P Sbjct 291 AVVTWLAVNAPFILTATRGWWEFFRMSALRPMDPDSLYNVFSYTSGWAGFDGVLQKNQTP 350 Query 364 LVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPL 423 LN V +LF+ CCA IAY+AL AP RPRV QL FL VA+FLL NKVWSPQ+SLWLVPL Sbjct 351 TYLNITVAVLFLTCCAGIAYLALAAPRRPRVGQLAFLVVAAFLLTNKVWSPQYSLWLVPL 410 Query 424 AVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLV 483 AVLA+P R+LL WM IDA+VWVPRM+Y G + LPE WF TV++RD+AV+ LC LV Sbjct 411 AVLAIPRWRLLLGWMLIDAVVWVPRMFYYLGVDHKGLPEGWFLGTVVVRDLAVIGLCVLV 470 Query 484 VWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAAD 522 V +IYRP DLVR G DDP GG A D Sbjct 471 VREIYRPATDLVRMDGD---------DDPAGGFLDGARD 500 >gi|340532789|gb|AEK47994.1| hypothetical protein RAM_47645 [Amycolatopsis mediterranei S699] Length=503 Score = 429 bits (1102), Expect = 7e-118, Method: Compositional matrix adjust. Identities = 248/499 (50%), Positives = 312/499 (63%), Gaps = 19/499 (3%) Query 25 NRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACL 84 R PS + L AA+ +GGP+G HA +GR +P RV +A + L L W K +C+ Sbjct 7 ERIVPSWNEPLAAAVTRPLGGPLGEHAAVGRHWFWSPQRVGLLLATLALMLCWFGKGSCI 66 Query 85 QSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQ-GKFPYKSSWIETDSNGTPQ 143 Q G ++ +W R + +CYSD VPLYG+E L + FPY +SW E+ Sbjct 67 QQYQDSSGATQL-DWRAGRPFVAMCYSDIVPLYGSERLDRPATFPYYTSWKESSQTA--- 122 Query 144 LRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLAL 203 + RYMEYPVLTG++Q+ + +A + +++ LP V ++F++ AF LA+ Sbjct 123 -----ENNTRYMEYPVLTGLFQWANAKLAAGWLNVAETGWLPGALPVAIYFDITAFFLAV 177 Query 204 AWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLA 263 AWL TVWAT RR WD LVA SPLV+ FTNFDA+AT +GLLAWAR+RP+LA Sbjct 178 AWLVTVWATGRTMRRRPWDMVLVAISPLVLVHAFTNFDAIATAFTATGLLAWARKRPLLA 237 Query 264 GVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGW 323 GVL+GLG+ AKLYPL L L L +RAG+L +T AA TWL VN P +L RGW Sbjct 238 GVLLGLGATAKLYPLFLLGVLFALCLRAGKLTPFWKTAGAAVVTWLAVNAPFILTATRGW 297 Query 324 SEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAY 383 EFFR++ R D DSLYNV +GW GFD L + P LN V +LF+ CCA IAY Sbjct 298 WEFFRMSALRPMDPDSLYNVFSYTSGWAGFDGVLQKNQTPTYLNITVAVLFLTCCAGIAY 357 Query 384 IALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDAL 443 +AL AP RPRV QL FL VA+FLL NKVWSPQ+SLWLVPLAVLA+P R+LL WM IDA+ Sbjct 358 LALAAPRRPRVGQLAFLVVAAFLLTNKVWSPQYSLWLVPLAVLAIPRWRLLLGWMLIDAV 417 Query 444 VWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGAL 503 VWVPRM+Y G + LPE WF TV++RD+AV+ LC LVV +IYRP DLVR G Sbjct 418 VWVPRMFYYLGVDHKGLPEGWFLGTVVVRDLAVIGLCVLVVREIYRPATDLVRMDGD--- 474 Query 504 PACGGVDDPVGGVFANAAD 522 DDP GG A D Sbjct 475 ------DDPAGGFLDGARD 487 >gi|319949384|ref|ZP_08023452.1| hypothetical protein ES5_08121 [Dietzia cinnamea P4] gi|319436949|gb|EFV92001.1| hypothetical protein ES5_08121 [Dietzia cinnamea P4] Length=501 Score = 412 bits (1060), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 238/482 (50%), Positives = 301/482 (63%), Gaps = 21/482 (4%) Query 46 PVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAY 105 P+GRHA++GR R TPLRV+ A++FLA G+ +KAACL++T G Q NWD R Y Sbjct 20 PLGRHAVVGRQRFWTPLRVIMLFAVIFLAFGFFSKAACLETTHPTDGSQPGLNWDG-RQY 78 Query 106 YQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQ 165 Y+ CY+D +PLY AE L G PYK SWI VRYMEYPVL+G++Q Sbjct 79 YKACYADPLPLYSAEGLDTGALPYKYSWIAEGGE------------VRYMEYPVLSGMFQ 126 Query 166 YLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAAL 225 Y++ A+ + PL EVV +F + LA W+ VWAT AGRR WD L Sbjct 127 YVTAQAAQALHEIFPGGPL----EVVTYFALGCVLLAFMWMVAVWATYRSAGRRPWDTLL 182 Query 226 VAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLL 285 +AASPLVIFQ FTN+D +A A+ LL WARRRPV AGV++GLG AAKLYPL LL Sbjct 183 MAASPLVIFQAFTNYDLMAVMFASVALLLWARRRPVWAGVVLGLGVAAKLYPLFLFGALL 242 Query 286 LLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVK 345 ++ IR R L + AAA WL VNLP+M+LFP GW EFFRLN+ R + +S+Y V++ Sbjct 243 VVAIRRRRFVELGKAAAAAVVAWLAVNLPIMVLFPDGWREFFRLNSDRPANPESIYVVIQ 302 Query 346 SFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASF 405 + TGW+GFD E P LNTV +LF C A+ I LTAP PRVAQL FL VA F Sbjct 303 TLTGWQGFDAGRAVGEAPATLNTVSLVLFAFACLAVLVIGLTAPVTPRVAQLAFLIVAFF 362 Query 406 LLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWF 465 LL NKVWSPQ+SLWLVPLAVLA+P R+LL WM DAL+WV M Y +G ++ + + F Sbjct 363 LLTNKVWSPQYSLWLVPLAVLAVPRVRLLLTWMAFDALLWVAHMSYFHGVANKGIGPELF 422 Query 466 TTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPP 525 VL+RD+ V+ +C +V+ +IYRP D VR A DP+ GV A+ + P Sbjct 423 HPLVLVRDLLVLAVCAVVILEIYRPHLDRVRM----THQATPEGHDPLAGVLADPGERPV 478 Query 526 GR 527 R Sbjct 479 TR 480 >gi|331700362|ref|YP_004336601.1| integral membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326955051|gb|AEA28748.1| integral membrane protein [Pseudonocardia dioxanivorans CB1190] Length=533 Score = 412 bits (1059), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 263/500 (53%), Positives = 321/500 (65%), Gaps = 21/500 (4%) Query 26 RDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQ 85 R PS T+ + AA + +VGGP+GRHA++GR+R TPLRV+ A+V +AL W K+ CLQ Sbjct 23 RVVPSWTEPMAAAASRLVGGPLGRHAIVGRSRFWTPLRVVLLFAVVVMALSWLGKSPCLQ 82 Query 86 STGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLR 145 G G + +W N R Y +CYSDTVPLYG E L +G PY+ +W+E GTPQ Sbjct 83 QYRAGDGSLAL-DWRNDRQYVAMCYSDTVPLYGLEGLDRGSVPYRDAWVE--GAGTPQE- 138 Query 146 YDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAW 205 +RYMEYPV+TG +Q+ + + + AL+ PLPV VV++F+++A LALAW Sbjct 139 -----TLRYMEYPVVTGFFQWFNARLTDGWLALADTLPLPVGLPVVVYFDISAAWLALAW 193 Query 206 LTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGV 265 L WA L R WDA LVA SPLV+ +FTNFDALA AT+G+LA ARRRPVLAG+ Sbjct 194 LVVAWAVCRLRPSRPWDATLVAVSPLVLVHLFTNFDALAAACATAGMLALARRRPVLAGI 253 Query 266 LIGLGSAAKLYPLLFLYPLLLLGIR---AGRLNALARTMAAAAATWLLVNLPVMLLFPRG 322 LIG+G AAKLYPL+ L P+LL+GIR AG L RT+ AA W VNLPV LL+ G Sbjct 254 LIGIGGAAKLYPLMLLLPVLLVGIRRRDAGGLRPAVRTIVAALVAWAAVNLPVALLWTPG 313 Query 323 WSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIA 382 W EFFRLN R D DS+Y + FTGW GFD +L + P +LNTV LFV C + Sbjct 314 WWEFFRLNQSRPADPDSIYFAISYFTGWPGFDGSLAPGQTPSILNTVTLGLFVAACVGVV 373 Query 383 YIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDA 442 +AL AP PR+A L FL VASFLLVNKVWSPQ+SLWLVPLAVLALP R+LLAWM DA Sbjct 374 VLALQAPRPPRLASLAFLVVASFLLVNKVWSPQYSLWLVPLAVLALPRWRLLLAWMAFDA 433 Query 443 LVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGG--- 499 VWVPRM+Y + LP WF VL+RD V+VL LVV + RP D VR G Sbjct 434 AVWVPRMFYYLTPEKKGLPPDWFLGAVLIRDALVVVLIVLVVRSVLRPDTDAVRLHGSDD 493 Query 500 ---PGALPAC---GGVDDPV 513 PGA P G V PV Sbjct 494 PDWPGAGPVGALRGAVRAPV 513 >gi|302531293|ref|ZP_07283635.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces sp. AA4] gi|302440188|gb|EFL12004.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces sp. AA4] Length=522 Score = 387 bits (995), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 226/424 (54%), Positives = 279/424 (66%), Gaps = 10/424 (2%) Query 25 NRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACL 84 R PSR D L AA +GGP+G HA +GR +P RV A+A++ L L W KA+C+ Sbjct 24 ERIAPSRHDPLVAAATRPIGGPIGAHAAVGRQWFWSPQRVGLAMAVLALVLCWFGKASCI 83 Query 85 QSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGK-FPYKSSWIETDSNGTPQ 143 Q G ++ +W + R + +CYSD VPLY +E L K FPY +SW E Q Sbjct 84 QQYSDSNGVHQL-DWRSGRPFVAMCYSDIVPLYSSEKLDDAKTFPYVTSWQEDSQTAENQ 142 Query 144 LRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLAL 203 RYMEYPV+TG++Q+++ +A +T+++ LP V ++FN++AF LAL Sbjct 143 --------TRYMEYPVVTGLFQWINAKLAAGWTSVANAGWLPGALPVAIYFNISAFWLAL 194 Query 204 AWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLA 263 AWL TVWAT RR WDA LVA SPLV+ FTNFDALAT +G+LAW+R+RP +A Sbjct 195 AWLVTVWATGRTTKRRPWDAVLVAISPLVLVHTFTNFDALATAATAAGILAWSRKRPEVA 254 Query 264 GVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGW 323 GVL GLG A KLYPLL L L LL +RAG+L A +RT A WL+VN+P ++ PRGW Sbjct 255 GVLFGLGVATKLYPLLLLGVLFLLCLRAGKLRAWSRTAVFAVLAWLVVNVPFIVAAPRGW 314 Query 324 SEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAY 383 EFFRLNT R D DSLYNVV TGW GFD L + P VLN VV +LF+ CCA IAY Sbjct 315 WEFFRLNTLRPMDPDSLYNVVSYATGWAGFDGVLQKGQTPTVLNIVVAVLFLACCAGIAY 374 Query 384 IALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDAL 443 +ALTAP RPR QL FL VA+FLL NKVWSPQ+SLWLVPLAVLA+P R+LL WM IDA Sbjct 375 VALTAPRRPRFGQLAFLVVAAFLLTNKVWSPQYSLWLVPLAVLAIPRWRLLLGWMVIDAA 434 Query 444 VWVP 447 VW P Sbjct 435 VWAP 438 >gi|25029379|ref|NP_739433.1| hypothetical protein CE2823 [Corynebacterium efficiens YS-314] gi|23494667|dbj|BAC19633.1| putative membrane protein [Corynebacterium efficiens YS-314] Length=572 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 212/506 (42%), Positives = 282/506 (56%), Gaps = 32/506 (6%) Query 15 PLAADLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLA 74 P + D + +R P+ T+++ N +GG +GR A +G R TPLRV+ +LVFLA Sbjct 77 PTSMDQKVITDRVSPADTEIVANDFINAIGGRLGRFAKVGTQRFWTPLRVLITTSLVFLA 136 Query 75 LGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWI 134 +G+ TKA C+Q G G NW R Y CY+D VPLYGA L FPY SW Sbjct 137 VGFLTKANCIQG-GRGDDGTLSLNWSGNRQYTSACYNDIVPLYGARGLDSPGFPYAYSWQ 195 Query 135 ETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFF 194 E D RYMEYPVL GI+Q+++ I + L + P + E +F Sbjct 196 EGD-------------LTRYMEYPVLGGIFQWIASIITRFLYPLVETLPFNSLPEAAFYF 242 Query 195 NVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLA 254 ++A GLA W+ + L G R+WD LVAASPLV FTN+D + LLA Sbjct 243 IISALGLAFFWVLVIRMMVELTGNRVWDTVLVAASPLVAVHAFTNWDTPSIAAVVGALLA 302 Query 255 WARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLP 314 R PV AGVLIGLG+A KL+PL L L+LG+R+G+L + + AA TWL+VN+P Sbjct 303 VKRGNPVWAGVLIGLGTAFKLWPLYLLGAFLVLGVRSGKLREFSSMLGAAVVTWLVVNIP 362 Query 315 VMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGF-WEPPLVLNTVVTLL 373 VM+ +P W EF RLN RG + ++Y ++ D L F P LNTV LL Sbjct 363 VMIAYPSAWYEFIRLNQTRGAEWTTIYQIL---------DRNLPFPINDPEGLNTVSFLL 413 Query 374 FVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRI 433 F C AIA L RPRVA+L FL VA+FLLVNKVWSPQ+SLWLVPLAVLALP R+ Sbjct 414 FAAACLAIAIFGLKVQRRPRVAELAFLIVAAFLLVNKVWSPQYSLWLVPLAVLALPRWRL 473 Query 434 LLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRD 493 L WM +DA+VW M+++ G + +P ++ RD ++ + +V+ Q+ Sbjct 474 LFPWMVVDAMVWPILMWHMLGTENMGIPSGLLDIVLITRDGFIIAMVVMVIRQM------ 527 Query 494 LVRTGGPGALPACGGVDDPVGGVFAN 519 + R P L A GG DP+ GVF + Sbjct 528 MGRIPDP-VLDAHGG-KDPLVGVFGD 551 >gi|259508440|ref|ZP_05751340.1| membrane protein [Corynebacterium efficiens YS-314] gi|259163994|gb|EEW48548.1| membrane protein [Corynebacterium efficiens YS-314] Length=493 Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 211/502 (43%), Positives = 280/502 (56%), Gaps = 32/502 (6%) Query 19 DLRSADNRDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWS 78 D + +R P+ T+++ N +GG +GR A +G R TPLRV+ +LVFLA+G+ Sbjct 2 DQKVITDRVSPADTEIVANDFINAIGGRLGRFAKVGTQRFWTPLRVLITTSLVFLAVGFL 61 Query 79 TKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDS 138 TKA C+Q G G NW R Y CY+D VPLYGA L FPY SW E D Sbjct 62 TKANCIQG-GRGDDGTLSLNWSGNRQYTSACYNDIVPLYGARGLDSPGFPYAYSWQEGD- 119 Query 139 NGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAA 198 RYMEYPVL GI+Q+++ I + L + P + E +F ++A Sbjct 120 ------------LTRYMEYPVLGGIFQWIASIITRFLYPLVETLPFNSLPEAAFYFIISA 167 Query 199 FGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARR 258 GLA W+ + L G R+WD LVAASPLV FTN+D + LLA R Sbjct 168 LGLAFFWVLVIRMMVELTGNRVWDTVLVAASPLVAVHAFTNWDTPSIAAVVGALLAVKRG 227 Query 259 RPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLL 318 PV AGVLIGLG+A KL+PL L L+LG+R+G+L + + AA TWL+VN+PVM+ Sbjct 228 NPVWAGVLIGLGTAFKLWPLYLLGAFLVLGVRSGKLREFSSMLGAAVVTWLVVNIPVMIA 287 Query 319 FPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGF-WEPPLVLNTVVTLLFVLC 377 +P W EF RLN RG + ++Y ++ D L F P LNTV LLF Sbjct 288 YPSAWYEFIRLNQTRGAEWTTIYQIL---------DRNLPFPINDPEGLNTVSFLLFAAA 338 Query 378 CAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAW 437 C AIA L RPRVA+L FL VA+FLLVNKVWSPQ+SLWLVPLAVLALP R+L W Sbjct 339 CLAIAIFGLKVQRRPRVAELAFLIVAAFLLVNKVWSPQYSLWLVPLAVLALPRWRLLFPW 398 Query 438 MTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRT 497 M +DA+VW M+++ G + +P ++ RD ++ + +V+ Q+ + R Sbjct 399 MVVDAMVWPILMWHMLGTENMGIPSGLLDIVLITRDGFIIAMVVMVIRQM------MGRI 452 Query 498 GGPGALPACGGVDDPVGGVFAN 519 P L A GG DP+ GVF + Sbjct 453 PDP-VLDAHGG-KDPLVGVFGD 472 >gi|325000756|ref|ZP_08121868.1| hypothetical protein PseP1_18402 [Pseudonocardia sp. P1] Length=419 Score = 343 bits (879), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 219/412 (54%), Positives = 264/412 (65%), Gaps = 12/412 (2%) Query 65 MFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQ 124 M A+V LA+ W KAACLQ T G + +W N R Y +CYSDTVPLYG E L+ Sbjct 1 MLLFAVVVLAVSWLGKAACLQEYRTADGVLAL-DWRNDRQYVAMCYSDTVPLYGLEGLAD 59 Query 125 GKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPL 184 PY+ +W E+ + DG RYMEYPVLTG +QYL+ + + LS+ PL Sbjct 60 DGVPYRDAWFESAA--------DGSRVERYMEYPVLTGFFQYLNAQLTDGWMWLSERLPL 111 Query 185 PVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALA 244 P +VV++F++ AF LA WL VWA L R WDAALVA SPL + FTNFD + Sbjct 112 PSALDVVVYFDITAFWLAAGWLAVVWAVLMLRPERPWDAALVALSPLALVHAFTNFDTVT 171 Query 245 TGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIR---AGRLNALARTM 301 LAT LLA R RP AGVLIGLG+AAKLYP L L P+LL+G R +G L A + Sbjct 172 VALATGALLALRRDRPGWAGVLIGLGAAAKLYPALLLLPILLVGWRRRSSGGLPRAAWVI 231 Query 302 AAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWE 361 AA +WL VNLPV L +PRGW+EFF LN R D DS++ + FTGW GFD L Sbjct 232 GAAIGSWLAVNLPVALAWPRGWAEFFLLNRTRPADPDSIWYSLYWFTGWAGFDGRLADGA 291 Query 362 PPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLV 421 P VLN V L VL AAIA++A AP P VA+L FL VA+FLL+NKVWSPQ+SLWLV Sbjct 292 APSVLNAVTAALMVLAFAAIAWLAWRAPRPPAVAELGFLVVAAFLLLNKVWSPQYSLWLV 351 Query 422 PLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTTTVLLRD 473 PLAVLALP R+LLAWMT+DALVWVPRMY G ++ LP + F TVL+RD Sbjct 352 PLAVLALPRWRLLLAWMTVDALVWVPRMYQYLGVEAKGLPVEPFLVTVLVRD 403 >gi|337291872|ref|YP_004630893.1| hypothetical protein CULC22_02272 [Corynebacterium ulcerans BR-AD22] gi|334700178|gb|AEG84974.1| putative membrane protein [Corynebacterium ulcerans BR-AD22] Length=513 Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 200/483 (42%), Positives = 272/483 (57%), Gaps = 21/483 (4%) Query 26 RDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQ 85 R P RT+ + + +GGP+GR + +G R TPLR++ +AL FL+L + TKA CL Sbjct 23 RISPGRTEPIARSFTEFLGGPLGRFSQVGTQRWWTPLRLLVTVALSFLSLAYMTKANCLH 82 Query 86 STGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLR 145 Q +W + Y CY+D +PLY L Q FPY SW E Sbjct 83 GNEVAGTAQ--LDWSGNKQYVSACYTDIIPLYSGRGLDQPGFPYAYSWQEGG-------- 132 Query 146 YDGQIAVRYMEYPVLTGIYQYLSMAIAKT-YTALSKVAPLPVVAEVVMFFNVAAFGLALA 204 RYMEYPVLTGI+Q++ AI + Y A+ A P V EV +F + A +AL Sbjct 133 -----VTRYMEYPVLTGIFQWIMAAITRLGYPAIH--AMFPSVPEVSFYFTITALTMALV 185 Query 205 WLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAG 264 W V + LAG R+WD LVAASPLV+ FTN+D LA A L+A+ R V+ G Sbjct 186 WGAVVAMLAELAGNRVWDVVLVAASPLVVVHAFTNWDILAIAAAIGALVAFRRHHLVITG 245 Query 265 VLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWS 324 VLIG+G++ KL+P L LL++ +R+ +L A A A TWL++N+PVML +P W Sbjct 246 VLIGVGTSFKLWPAFLLGALLIVALRSKKLRAWFVLAAGALVTWLIINVPVMLAYPNAWG 305 Query 325 EFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYI 384 EF RLN++RG + ++Y V+ GW G DP + P+ LN + LLFV C IA + Sbjct 306 EFLRLNSQRGWEWTTIYAVLSREFGWSGLDPAG---KAPVNLNILTLLLFVAACVGIAVL 362 Query 385 ALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALV 444 L RPRVA+L FL VA+FLL+NKVWSPQ+SLWLVPLAVLALP R++ AW IDA Sbjct 363 GLCVRRRPRVAELIFLIVAAFLLINKVWSPQYSLWLVPLAVLALPRWRLIFAWGLIDAAT 422 Query 445 WVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALP 504 W M++L G ++ P +L RD ++++ +V+ Q+ D V G P Sbjct 423 WPILMWHLLGAENKGAPAGLLDLFILGRDGLILIIAVMVIRQMLGKTVDKVSRDHGGCDP 482 Query 505 ACG 507 G Sbjct 483 LAG 485 >gi|334697843|gb|AEG82640.1| putative membrane protein [Corynebacterium ulcerans 809] Length=513 Score = 337 bits (863), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 199/486 (41%), Positives = 271/486 (56%), Gaps = 21/486 (4%) Query 26 RDCPSRTDVLGAALANVVGGPVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQ 85 R P RT+ + + +GGP+GR + +G R TPLR++ +AL FL+L + TKA CL Sbjct 23 RISPGRTEPIARSFTEFLGGPLGRFSQVGAQRWWTPLRLLVTVALSFLSLAYMTKANCLH 82 Query 86 STGTGPGDQRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLR 145 Q +W + Y CY+D +PLY L Q FPY SW E Sbjct 83 GNEVAGTAQ--LDWSGNKQYVSACYTDIIPLYSGRGLDQPGFPYAYSWQEGG-------- 132 Query 146 YDGQIAVRYMEYPVLTGIYQYLSMAIAKT-YTALSKVAPLPVVAEVVMFFNVAAFGLALA 204 RYMEYPVLTGI+Q++ AI + Y A+ A P V EV +F + A +AL Sbjct 133 -----VTRYMEYPVLTGIFQWIMAAITRLGYPAIH--AMFPSVPEVSFYFTITALAMALV 185 Query 205 WLTTVWATSGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAG 264 W V + LA R+WD LVAASPLV+ FTN+D LA A L+A+ R V+ G Sbjct 186 WGAVVAMLAELAENRVWDVVLVAASPLVVVHAFTNWDILAIAAAIGALVAFRRHHLVITG 245 Query 265 VLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWS 324 VLIG+G++ KL+P L LL++ +R+ +L A A A TWL++N+PVML +P W Sbjct 246 VLIGVGTSFKLWPAFLLGALLIVALRSKKLRAWFVLAAGALVTWLIINVPVMLAYPNAWG 305 Query 325 EFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYI 384 EF RLN++RG + ++Y V+ GW G DP + P+ LN + LLFV C I + Sbjct 306 EFLRLNSQRGWEWTTIYAVLSREFGWSGLDPAG---KAPVNLNILTLLLFVAACVGIVVL 362 Query 385 ALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALV 444 L RPRVA+L FL VA+FLL+NKVWSPQ+SLWLVPLAVLALP R++ AW IDA Sbjct 363 GLCVRRRPRVAELIFLIVAAFLLINKVWSPQYSLWLVPLAVLALPRWRLIFAWGLIDAAT 422 Query 445 WVPRMYYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALP 504 W M++L G ++ P +L RD ++++ +V+ Q+ D V G P Sbjct 423 WPILMWHLLGAENKGAPAGLLDLFILGRDGLILIIAVMVIRQMLGKTVDKVSRDHGGCDP 482 Query 505 ACGGVD 510 G D Sbjct 483 LAGPFD 488 Lambda K H 0.325 0.139 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1249804985370 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40