BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0057

Length=173
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|254233456|ref|ZP_04926782.1|  hypothetical protein TBCG_00056 ...   351    2e-95
gi|15607199|ref|NP_214571.1|  hypothetical protein Rv0057 [Mycoba...   351    2e-95
gi|328456762|gb|AEB02185.1|  hypothetical protein TBSG_00056 [Myc...   350    4e-95
gi|340625090|ref|YP_004743542.1|  hypothetical protein MCAN_00561...   350    5e-95
gi|289441424|ref|ZP_06431168.1|  conserved hypothetical protein [...   350    6e-95
gi|289445583|ref|ZP_06435327.1|  conserved hypothetical protein [...   349    9e-95
gi|289567943|ref|ZP_06448170.1|  hypothetical protein TBJG_03075 ...   333    4e-90
gi|289764171|ref|ZP_06523549.1|  conserved hypothetical protein [...   325    2e-87
gi|254548989|ref|ZP_05139436.1|  hypothetical protein Mtube_00746...   299    9e-80
gi|294995673|ref|ZP_06801364.1|  hypothetical protein Mtub2_14493...   147    4e-34
gi|118082088|ref|XP_425420.2|  PREDICTED: hypothetical protein [G...  39.7    0.18 
gi|322387386|ref|ZP_08060996.1|  beta-galactosidase [Streptococcu...  33.9    9.6  


>gi|254233456|ref|ZP_04926782.1| hypothetical protein TBCG_00056 [Mycobacterium tuberculosis C]
 gi|289747826|ref|ZP_06507204.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|124603249|gb|EAY61524.1| hypothetical protein TBCG_00056 [Mycobacterium tuberculosis C]
 gi|289688354|gb|EFD55842.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=175

 Score =  351 bits (900),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 173/173 (100%), Positives = 173/173 (100%), Gaps = 0/173 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
            MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  3    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  62

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  63   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  122

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT
Sbjct  123  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  175


>gi|15607199|ref|NP_214571.1| hypothetical protein Rv0057 [Mycobacterium tuberculosis H37Rv]
 gi|15839434|ref|NP_334471.1| hypothetical protein MT0063 [Mycobacterium tuberculosis CDC1551]
 gi|31791234|ref|NP_853727.1| hypothetical protein Mb0058 [Mycobacterium bovis AF2122/97]
 44 more sequence titles
 
gi|121635967|ref|YP_976190.1| hypothetical protein BCG_0088 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148659817|ref|YP_001281340.1| hypothetical protein MRA_0059A [Mycobacterium tuberculosis H37Ra]
 gi|148821247|ref|YP_001286001.1| hypothetical protein TBFG_10056 [Mycobacterium tuberculosis F11]
 gi|167970583|ref|ZP_02552860.1| hypothetical protein MtubH3_22118 [Mycobacterium tuberculosis 
H37Ra]
 gi|224988440|ref|YP_002643107.1| hypothetical protein JTY_0058 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253796972|ref|YP_003029973.1| hypothetical protein TBMG_00056 [Mycobacterium tuberculosis KZN 
1435]
 gi|254366515|ref|ZP_04982559.1| hypothetical protein TBHG_00057 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289552306|ref|ZP_06441516.1| hypothetical protein TBXG_00056 [Mycobacterium tuberculosis KZN 
605]
 gi|289572633|ref|ZP_06452860.1| hypothetical protein TBOG_00477 [Mycobacterium tuberculosis K85]
 gi|289756116|ref|ZP_06515494.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760155|ref|ZP_06519533.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298527455|ref|ZP_07014864.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308370303|ref|ZP_07666910.1| hypothetical protein TMCG_03769 [Mycobacterium tuberculosis SUMu003]
 gi|308375051|ref|ZP_07667933.1| hypothetical protein TMGG_01527 [Mycobacterium tuberculosis SUMu007]
 gi|308376295|ref|ZP_07668246.1| hypothetical protein TMHG_03053 [Mycobacterium tuberculosis SUMu008]
 gi|308378532|ref|ZP_07668778.1| hypothetical protein TMIG_00337 [Mycobacterium tuberculosis SUMu009]
 gi|308379684|ref|ZP_07669022.1| hypothetical protein TMJG_01237 [Mycobacterium tuberculosis SUMu010]
 gi|339630140|ref|YP_004721782.1| hypothetical protein MAF_00570 [Mycobacterium africanum GM041182]
 gi|54039877|sp|P64680.1|Y058_MYCBO RecName: Full=Uncharacterized protein Mb0058; Flags: Precursor
 gi|54042436|sp|P64679.1|Y057_MYCTU RecName: Full=Uncharacterized protein Rv0057/MT0063; Flags: Precursor
 gi|1568596|emb|CAB02535.1| HYPOTHETICAL PROTEIN Rv0057 [Mycobacterium tuberculosis H37Rv]
 gi|13879106|gb|AAK44285.1| hypothetical protein MT0063 [Mycobacterium tuberculosis CDC1551]
 gi|31616819|emb|CAD92920.1| HYPOTHETICAL PROTEIN Mb0058 [Mycobacterium bovis AF2122/97]
 gi|121491614|emb|CAL70072.1| Hypothetical protein BCG_0088 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|134152027|gb|EBA44072.1| hypothetical protein TBHG_00057 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148503969|gb|ABQ71778.1| hypothetical protein MRA_0059A [Mycobacterium tuberculosis H37Ra]
 gi|148719774|gb|ABR04399.1| hypothetical protein TBFG_10056 [Mycobacterium tuberculosis F11]
 gi|224771553|dbj|BAH24359.1| hypothetical protein JTY_0058 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253318475|gb|ACT23078.1| hypothetical protein TBMG_00056 [Mycobacterium tuberculosis KZN 
1435]
 gi|289436938|gb|EFD19431.1| hypothetical protein TBXG_00056 [Mycobacterium tuberculosis KZN 
605]
 gi|289537064|gb|EFD41642.1| hypothetical protein TBOG_00477 [Mycobacterium tuberculosis K85]
 gi|289696703|gb|EFD64132.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289715719|gb|EFD79731.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497249|gb|EFI32543.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308332514|gb|EFP21365.1| hypothetical protein TMCG_03769 [Mycobacterium tuberculosis SUMu003]
 gi|308347728|gb|EFP36579.1| hypothetical protein TMGG_01527 [Mycobacterium tuberculosis SUMu007]
 gi|308351645|gb|EFP40496.1| hypothetical protein TMHG_03053 [Mycobacterium tuberculosis SUMu008]
 gi|308352352|gb|EFP41203.1| hypothetical protein TMIG_00337 [Mycobacterium tuberculosis SUMu009]
 gi|308356252|gb|EFP45103.1| hypothetical protein TMJG_01237 [Mycobacterium tuberculosis SUMu010]
 gi|323717396|gb|EGB26601.1| hypothetical protein TMMG_00476 [Mycobacterium tuberculosis CDC1551A]
 gi|326905817|gb|EGE52750.1| hypothetical protein TBPG_03783 [Mycobacterium tuberculosis W-148]
 gi|339329496|emb|CCC25131.1| hypothetical protein MAF_00570 [Mycobacterium africanum GM041182]
 gi|341599983|emb|CCC62651.1| hypothetical protein BCGM_0058 [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344217874|gb|AEM98504.1| hypothetical protein MTCTRI2_0059 [Mycobacterium tuberculosis 
CTRI-2]
Length=173

 Score =  351 bits (900),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 173/173 (100%), Positives = 173/173 (100%), Gaps = 0/173 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
            MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT
Sbjct  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173


>gi|328456762|gb|AEB02185.1| hypothetical protein TBSG_00056 [Mycobacterium tuberculosis KZN 
4207]
Length=173

 Score =  350 bits (898),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 172/173 (99%), Positives = 173/173 (100%), Gaps = 0/173 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
            MPVVTAVGRRRGFAMPWVSTARSGAVM+ANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  1    MPVVTAVGRRRGFAMPWVSTARSGAVMMANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT
Sbjct  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173


>gi|340625090|ref|YP_004743542.1| hypothetical protein MCAN_00561 [Mycobacterium canettii CIPT 
140010059]
 gi|340003280|emb|CCC42397.1| hypothetical protein MCAN_00561 [Mycobacterium canettii CIPT 
140010059]
Length=173

 Score =  350 bits (898),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 172/173 (99%), Positives = 173/173 (100%), Gaps = 0/173 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
            MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNT+VDGYAHAMHSSINSGPLE
Sbjct  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTEVDGYAHAMHSSINSGPLE  120

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT
Sbjct  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173


>gi|289441424|ref|ZP_06431168.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289414343|gb|EFD11583.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=180

 Score =  350 bits (897),  Expect = 6e-95, Method: Compositional matrix adjust.
 Identities = 172/173 (99%), Positives = 172/173 (99%), Gaps = 0/173 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
             PVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  8    QPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  67

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  68   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  127

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT
Sbjct  128  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  180


>gi|289445583|ref|ZP_06435327.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418541|gb|EFD15742.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=173

 Score =  349 bits (895),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 172/173 (99%), Positives = 172/173 (99%), Gaps = 0/173 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
            MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKAN PGAVT
Sbjct  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANMPGAVT  60

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT
Sbjct  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT  173


>gi|289567943|ref|ZP_06448170.1| hypothetical protein TBJG_03075 [Mycobacterium tuberculosis T17]
 gi|289541696|gb|EFD45345.1| hypothetical protein TBJG_03075 [Mycobacterium tuberculosis T17]
Length=172

 Score =  333 bits (855),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 164/165 (99%), Positives = 164/165 (99%), Gaps = 0/165 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
             PVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  8    QPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  67

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  68   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  127

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGE  165
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGE
Sbjct  128  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGE  172


>gi|289764171|ref|ZP_06523549.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289711677|gb|EFD75693.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=165

 Score =  325 bits (832),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 160/160 (100%), Positives = 160/160 (100%), Gaps = 0/160 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
            MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  3    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  62

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  63   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  122

Query  121  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGAC  160
            YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGAC
Sbjct  123  YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGAC  162


>gi|254548989|ref|ZP_05139436.1| hypothetical protein Mtube_00746 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=147

 Score =  299 bits (766),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%)

Query  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
            MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  1    MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60

Query  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120
            WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE
Sbjct  61   WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE  120

Query  121  YLPATFSVFPALGDVGDLGGGVGAATY  147
            YLPATFSVFPALGDVGDLGGGVGAATY
Sbjct  121  YLPATFSVFPALGDVGDLGGGVGAATY  147


>gi|294995673|ref|ZP_06801364.1| hypothetical protein Mtub2_14493 [Mycobacterium tuberculosis 
210]
Length=80

 Score =  147 bits (372),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60
           MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT
Sbjct  1   MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT  60

Query  61  WLDTPKRFLSTQ  72
           WLDTPKRFLSTQ
Sbjct  61  WLDTPKRFLSTQ  72


>gi|118082088|ref|XP_425420.2| PREDICTED: hypothetical protein [Gallus gallus]
Length=929

 Score = 39.7 bits (91),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 36/109 (34%), Positives = 50/109 (46%), Gaps = 22/109 (20%)

Query  63   DTPKR-FLSTQTASRCMAVNSSD---VVTGRIDPQVLHTPLNTD------VDGYAHAMHS  112
            D+P R F S Q++    ++N S     VTGRID  VL   L+ +      V+   H  HS
Sbjct  360  DSPSRLFYSIQSSDTYFSINPSTGVLQVTGRIDRDVLPLQLHPNISVIVRVEDSPHGGHS  419

Query  113  S----------INSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDR  151
            S          IN  P E  P+TFS++ + G +  LG   G   Y + R
Sbjct  420  SEMEITVIIGDINDNPPECNPSTFSLYYSYGTI--LGIQEGDHIYRMQR  466


>gi|322387386|ref|ZP_08060996.1| beta-galactosidase [Streptococcus infantis ATCC 700779]
 gi|321141915|gb|EFX37410.1| beta-galactosidase [Streptococcus infantis ATCC 700779]
Length=2307

 Score = 33.9 bits (76),  Expect = 9.6, Method: Composition-based stats.
 Identities = 22/70 (32%), Positives = 37/70 (53%), Gaps = 4/70 (5%)

Query  90    IDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYAL  149
             ++P V   P  T   G  +A+ +++N  P EY     +VF A+ +V +  GGV AA  A+
Sbjct  2152  VEPAVHEVPEYT---GGVNAVEAAVNEVP-EYKGGVNAVFAAVNEVPEYTGGVNAAEAAV  2207

Query  150   DRLSNMRSGA  159
             + +   + GA
Sbjct  2208  NDVPEYKGGA  2217



Lambda     K      H
   0.319    0.132    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 143230884104




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40