BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0060 Length=352 Score E Sequences producing significant alignments: (Bits) Value gi|15607202|ref|NP_214574.1| hypothetical protein Rv0060 [Mycoba... 717 0.0 gi|306795657|ref|ZP_07433959.1| hypothetical protein TMFG_02222 ... 716 0.0 gi|289748525|ref|ZP_06507903.1| conserved hypothetical protein [... 506 2e-141 gi|289760160|ref|ZP_06519538.1| conserved hypothetical protein [... 341 1e-91 gi|209963820|ref|YP_002296735.1| hypothetical protein RC1_0485 [... 303 2e-80 gi|30249341|ref|NP_841411.1| Appr-1-p processing enzyme [Nitroso... 301 1e-79 gi|309811923|ref|ZP_07705695.1| macro domain protein [Dermacoccu... 295 7e-78 gi|251788570|ref|YP_003003291.1| Appr-1-p processing domain-cont... 288 1e-75 gi|192290491|ref|YP_001991096.1| Appr-1-p processing domain-cont... 285 1e-74 gi|153872689|ref|ZP_02001507.1| protein containing Appr-1-p proc... 283 2e-74 gi|333979006|ref|YP_004516951.1| Appr-1-p processing domain-cont... 283 3e-74 gi|261344445|ref|ZP_05972089.1| appr-1-p processing enzyme famil... 283 4e-74 gi|126667034|ref|ZP_01738009.1| Appr-1-p processing enzyme famil... 282 5e-74 gi|37522940|ref|NP_926317.1| hypothetical protein glr3371 [Gloeo... 280 4e-73 gi|336317682|ref|ZP_08572533.1| Putative phosphatase, C-terminal... 279 4e-73 gi|257095820|ref|YP_003169461.1| Appr-1-p processing domain-cont... 279 5e-73 gi|339998309|ref|YP_004729192.1| putative prophage protein [Salm... 278 8e-73 gi|237654250|ref|YP_002890564.1| Appr-1-p processing domain-cont... 278 8e-73 gi|154253369|ref|YP_001414193.1| appr-1-p processing domain-cont... 278 1e-72 gi|307154520|ref|YP_003889904.1| Appr-1-p processing domain-cont... 278 1e-72 gi|343506027|ref|ZP_08743548.1| appr-1-p processing domain-conta... 277 2e-72 gi|332525725|ref|ZP_08401873.1| Appr-1-p processing domain prote... 277 2e-72 gi|339481726|ref|YP_004693512.1| Appr-1-p processing domain-cont... 277 2e-72 gi|329889716|ref|ZP_08268059.1| hypothetical protein BDIM_14050 ... 277 2e-72 gi|56421652|ref|YP_148970.1| hypothetical protein GK3117 [Geobac... 276 5e-72 gi|120608869|ref|YP_968547.1| appr-1-p processing domain-contain... 273 2e-71 gi|119483245|ref|ZP_01618659.1| hypothetical protein L8106_04311... 273 4e-71 gi|74317507|ref|YP_315247.1| Appr-1-p processing protein [Thioba... 273 4e-71 gi|38505776|ref|NP_942395.1| hypothetical protein sll8001 [Synec... 271 2e-70 gi|146294613|ref|YP_001185037.1| appr-1-p processing domain-cont... 270 3e-70 gi|284028171|ref|YP_003378102.1| Appr-1-p processing domain-cont... 268 8e-70 gi|218295755|ref|ZP_03496551.1| Appr-1-p processing domain prote... 268 1e-69 gi|300868769|ref|ZP_07113380.1| Appr-1-p processing domain prote... 268 1e-69 gi|189425257|ref|YP_001952434.1| Appr-1-p processing domain-cont... 266 5e-69 gi|288457845|ref|YP_003422713.1| Appr-1-p processing domain prot... 265 1e-68 gi|335933057|gb|AEH63595.1| Appr-1-p processing domain protein [... 264 1e-68 gi|115375571|ref|ZP_01462829.1| appr-1-p processing protein [Sti... 262 5e-68 gi|85372713|gb|ABC70162.1| Appr-1-p processing enzyme family pro... 262 5e-68 gi|292493385|ref|YP_003528824.1| Appr-1-p processing domain prot... 262 6e-68 gi|298529481|ref|ZP_07016884.1| Appr-1-p processing domain prote... 262 8e-68 gi|209527877|ref|ZP_03276366.1| Appr-1-p processing domain prote... 261 8e-68 gi|284119731|ref|ZP_06386789.1| protein containing Appr-1-p proc... 261 9e-68 gi|209527889|ref|ZP_03276378.1| Appr-1-p processing domain prote... 261 9e-68 gi|238921298|ref|YP_002934813.1| hypothetical protein NT01EI_344... 261 1e-67 gi|256023436|ref|ZP_05437301.1| hypothetical protein E4_08683 [E... 261 1e-67 gi|148654474|ref|YP_001274679.1| appr-1-p processing domain-cont... 261 2e-67 gi|183597178|ref|ZP_02958671.1| hypothetical protein PROSTU_0042... 258 1e-66 gi|338708706|ref|YP_004673789.1| Appr-1-p processing domain-cont... 257 2e-66 gi|269140416|ref|YP_003297117.1| hypothetical protein ETAE_3073 ... 257 3e-66 gi|253687259|ref|YP_003016449.1| Appr-1-p processing domain prot... 256 3e-66 >gi|15607202|ref|NP_214574.1| hypothetical protein Rv0060 [Mycobacterium tuberculosis H37Rv] gi|15839437|ref|NP_334474.1| hypothetical protein MT0066 [Mycobacterium tuberculosis CDC1551] gi|31791237|ref|NP_853730.1| hypothetical protein Mb0061 [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=352 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/352 (100%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM Sbjct 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN Sbjct 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 180 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ Sbjct 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 180 Query 181 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 240 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF Sbjct 181 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 240 Query 241 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV 300 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV Sbjct 241 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV 300 Query 301 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA 352 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA Sbjct 301 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA 352 >gi|306795657|ref|ZP_07433959.1| hypothetical protein TMFG_02222 [Mycobacterium tuberculosis SUMu006] gi|308343947|gb|EFP32798.1| hypothetical protein TMFG_02222 [Mycobacterium tuberculosis SUMu006] Length=352 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/352 (99%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM Sbjct 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN Sbjct 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 180 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ Sbjct 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 180 Query 181 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 240 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF Sbjct 181 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 240 Query 241 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV 300 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV Sbjct 241 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV 300 Query 301 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA 352 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGR+YSDDRIGVALDRILMTA Sbjct 301 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGRMYSDDRIGVALDRILMTA 352 >gi|289748525|ref|ZP_06507903.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289689112|gb|EFD56541.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=258 Score = 506 bits (1303), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 243/243 (100%), Positives = 243/243 (100%), Gaps = 0/243 (0%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM Sbjct 16 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 75 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN Sbjct 76 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 135 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 180 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ Sbjct 136 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 195 Query 181 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 240 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF Sbjct 196 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 255 Query 241 TVG 243 TVG Sbjct 256 TVG 258 >gi|289760160|ref|ZP_06519538.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289715724|gb|EFD79736.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=168 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%) Query 185 MEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAFTVGL 244 MEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAFTVGL Sbjct 1 MEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAFTVGL 60 Query 245 GDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGVELLA 304 GDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGVELLA Sbjct 61 GDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGVELLA 120 Query 305 STHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA 352 STHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA Sbjct 121 STHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA 168 >gi|209963820|ref|YP_002296735.1| hypothetical protein RC1_0485 [Rhodospirillum centenum SW] gi|209957286|gb|ACI97922.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length=344 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 158/348 (46%), Positives = 214/348 (62%), Gaps = 13/348 (3%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y +GD+LRAD EA+VNTVNCVG+MG+GIALQFK +P F AYE ACKR EV GKM Sbjct 1 MIRYTTGDILRADAEAIVNTVNCVGIMGRGIALQFKNAFPANFKAYEAACKRDEVQPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV DTG PK+IINFPTK+HWR S++ ID+GL+ L +R+ +I S+A+PPLG G Sbjct 61 FVFDTGTFTNPKYIINFPTKRHWRGKSRMDDIDSGLVALAEEVRQRSIRSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 180 GGL+WEDV R+ +A + LPD+D +++ P+ + E M+ GRA ++ M RYL Sbjct 121 GGLNWEDVRPRIEAALRDLPDLDVIVFEPNNAPVTTKSQEVPTMSPGRAALVVLMNRYLG 180 Query 181 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 240 M+P+ ++ LE+ KLMYF EA L L + YGPY+E +RH+L +EG Sbjct 181 G--LMDPF-----VTLLELHKLMYFMQEAGEPLRLKYAKAPYGPYAENLRHVLHAVEGHL 233 Query 241 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV 300 G DG + P A+ D + + +A +D V ++EGFE P+G+ Sbjct 234 VSGYADG-----GDAPDKQLELVPGAVKDAESFLSDKQDTTARLDRVAELVEGFETPFGL 288 Query 301 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 ELLA+ HWV TRE A A A V W +RK R +S +IG+AL + Sbjct 289 ELLATVHWVTTRENAISAEDAMAKVYAWNERKKR-FSPRQIGIALQTL 335 >gi|30249341|ref|NP_841411.1| Appr-1-p processing enzyme [Nitrosomonas europaea ATCC 19718] gi|30180660|emb|CAD85275.1| Appr-1-p processing enzyme family [Nitrosomonas europaea ATCC 19718] Length=352 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 157/351 (45%), Positives = 218/351 (63%), Gaps = 16/351 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y SGD+LR + +ALVNTVNCVGVMG+GIALQFK YP F AYE ACKR EV G+M Sbjct 1 MIEYTSGDILRCEADALVNTVNCVGVMGRGIALQFKNMYPANFKAYEAACKREEVQPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +T QL P+ IINFPTK+HWR S++ I+AGL+DL+ VIR+ NI S+A+PPLG G Sbjct 61 FVFETKQLTPPRLIINFPTKRHWRGKSRIEDIEAGLVDLVNVIRDKNIRSIAIPPLGAGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGG---SRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW++V R+ A +L V ++Y P+G + E +MT GRA ++E M+R Sbjct 121 GGLDWKEVRPRIEHALGELEGVQVIVYEPNGAPASDKMAHVREVPKMTSGRAALVELMQR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL ++P+ ++ LE+ KLMYF EA L LD+ YGPY++ +RH+L +E Sbjct 181 YLSG--LLDPF-----VTLLEVHKLMYFMQEAGEPLRLDYIKHHYGPYAKNLRHVLNAIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G G DG ++P+SL +L + A + V R++EGFE P Sbjct 234 GHLIAGYADGGD--APDKPLSLVPGAVAEAKSFLDQHEIS---RARFERVTRLVEGFESP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 YG+ELLA+ HWV REGA + + + +W RK R ++ ++ +A +R+ Sbjct 289 YGLELLATVHWVIHREGATQSDSVKRQIYQWNDRK-RQFTQRQLVIAEERL 338 >gi|309811923|ref|ZP_07705695.1| macro domain protein [Dermacoccus sp. Ellin185] gi|308434135|gb|EFP57995.1| macro domain protein [Dermacoccus sp. Ellin185] Length=348 Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 161/347 (47%), Positives = 213/347 (62%), Gaps = 15/347 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MIT SGDLL+A +ALVNTVN VGVMGKGIALQFKR +P+M+ AY RG + G+M Sbjct 1 MITDASGDLLKAPVDALVNTVNTVGVMGKGIALQFKRAFPQMYAAYRADADRGLIMPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 V DTGQ+ P++IINFPTK+HW+ PS+L I+AGL DL+RV++E I S+AVPPLG GN Sbjct 61 HVWDTGQMLPPRYIINFPTKRHWKTPSRLDDIEAGLQDLVRVVQEREIGSLAVPPLGCGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL---RMTWGRAVILEAMRR 177 GGLDW V +V AF P VD ++ P G A V +MT GRA ++E +R Sbjct 121 GGLDWAVVRPLIVEAFAAAPGVDVRLFAPEGPPAAATMVARAARPQMTPGRAALVEMVRA 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y Q + P I E+QKLMYF E L L F YGPY++ +RH+L +E Sbjct 181 YTGQ-----AFSAPGLI---EVQKLMYFLQEDGQPLQLRFKAHHYGPYADNLRHVLSLVE 232 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G F +G GDG+ARV ++P+ + + L A ++++ VL +EGFE P Sbjct 233 GHFLMGFGDGSARVQQSEPLRVVEGAAAEAENVL----AGSEYLSSIERVLATVEGFESP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVA 344 YG+ELLA+THW+ TRE A + V W+ RK R++SD + A Sbjct 289 YGLELLATTHWLMTREHATSVGDLVSHVAAWSDRKRRMFSDQDLAAA 335 >gi|251788570|ref|YP_003003291.1| Appr-1-p processing domain-containing protein [Dickeya zeae Ech1591] gi|247537191|gb|ACT05812.1| Appr-1-p processing domain protein [Dickeya zeae Ech1591] Length=349 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 152/351 (44%), Positives = 211/351 (61%), Gaps = 16/351 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y GD+L+A+TEA++NTVNCVGVMG+GIALQFK YP+ F AY +CK +V GKM Sbjct 1 MIEYRQGDILQAETEAIINTVNCVGVMGRGIALQFKNAYPDNFKAYAASCKAKQVVPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TGQL P++IINFPTK+HW+ S+L I AGL DL+ VIR+ +I S+A+PPLG G Sbjct 61 FVFETGQLTNPRYIINFPTKRHWKGKSRLEDIAAGLDDLVAVIRQHDIRSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGG---SRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW+DV+ + SA Q L V IY P+G R + E +MT GRA ++E M+R Sbjct 121 GGLDWQDVKPLIESAVQPLESVQIAIYDPNGAPSSERMVHKTEVPKMTAGRAALVELMQR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL ++P+ IS LE+ KLMYF E+ L L + YGPY+E +RH+L +E Sbjct 181 YLNG--LLDPF-----ISLLELHKLMYFMQESGEPLRLKYQKAHYGPYAENLRHVLNAIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G G DG + ++ +SL + +L R V ++EGFE P Sbjct 234 GHMISGYSDGGD--MPDKQLSLVPGVAEEAKAFLEQQEETYR---RFQKVSDLVEGFESP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 +G+ELL++ HW E P + W +RK R ++ +I +A+D + Sbjct 289 FGLELLSTVHWTMQHESLTSPEDVTDFIYAWNERK-RQFTPRQISLAVDTL 338 >gi|192290491|ref|YP_001991096.1| Appr-1-p processing domain-containing protein [Rhodopseudomonas palustris TIE-1] gi|192284240|gb|ACF00621.1| Appr-1-p processing domain protein [Rhodopseudomonas palustris TIE-1] Length=345 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 160/351 (46%), Positives = 218/351 (63%), Gaps = 24/351 (6%) Query 6 SGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKMFVVDT 65 +G+LL +A+VNTVN VGVMGKGIALQFKR++P AYE ACKRGEV GKMFV D Sbjct 7 TGNLLERRVDAIVNTVNTVGVMGKGIALQFKRKWPANAKAYEAACKRGEVVPGKMFVFDN 66 Query 66 GQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGNGGLDW 125 G L PK IINFPTK+HWR PS++A I+AGL+DLI IR L I S+A+PPLG GNGGLDW Sbjct 67 GGLIAPKFIINFPTKRHWRQPSRMADIEAGLVDLIVQIRHLQIRSIALPPLGCGNGGLDW 126 Query 126 EDVEQRLVSAFQQLPDVDAVIYPP--SGGSRAIE-GVEGLRMTWGRAVILEAMRRYLQQR 182 + V ++ +AF++LPDVD ++ P + G R +E + RMT GRA IL+ + Y + R Sbjct 127 DQVRPKIEAAFRELPDVDVELFAPAEAAGVRQLEPEAQKPRMTPGRAAILKLLSIYREMR 186 Query 183 RAMEPWEDPAGISHLEIQKLMYFANEADPDL-ALDFTPGRYGPYSERVRHLLQGMEGAFT 241 + S +EIQKL+YF A + +L F YGPY+ +RH+L M+GA+ Sbjct 187 YPL---------SQIEIQKLVYFLASAGQAMGSLTFKKHIYGPYAPELRHVLTKMDGAYL 237 Query 242 VGLGDGTARVLANQPISLTTKGTDAITD---YLATDAAADRVSAAVDTVLRVIEGFEGPY 298 G+GDG+ +P +T G +A+ + +L + + V V+ + R+I+GFE PY Sbjct 238 HGVGDGS------KPSEITVVG-EALREAEAFLNSHQDFETVR-RVEQIARLIDGFETPY 289 Query 299 GVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRIL 349 G+ELLA+ HW A + AV W +RK +I I A DR++ Sbjct 290 GMELLATVHWTANETKTTDLNRIVEAVHSWNERKRQIMLPANIKSARDRLV 340 >gi|153872689|ref|ZP_02001507.1| protein containing Appr-1-p processing domain [Beggiatoa sp. PS] gi|152070846|gb|EDN68494.1| protein containing Appr-1-p processing domain [Beggiatoa sp. PS] Length=343 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 152/349 (44%), Positives = 205/349 (59%), Gaps = 18/349 (5%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y SGD+LRAD +A+VNTVNCVGVMG+GIALQFK+ +P+ F Y +ACK ++ GKM Sbjct 1 MIEYTSGDILRADAQAIVNTVNCVGVMGRGIALQFKKAWPDNFKVYAEACKNKQIQPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV DT +L P +IINFPTK+HWR S++ I++GL LI IRE I S+A+PPLG G Sbjct 61 FVFDTQRLTNPHYIINFPTKRHWRDASRMEDIESGLEALIETIRENQIQSIAIPPLGCGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL---RMTWGRAVILEAMRR 177 GGLDWE V+ R+ A LP+V ++ P G + V +MT GRAV++E ++R Sbjct 121 GGLDWEQVKSRIEPALSALPEVHVIVLEPKGAPENDKMVRNQPVPKMTAGRAVLIELIQR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL DP +S LE+ KL+YF EA L L + YGPY+E +RH+L +E Sbjct 181 YLGGLL------DPT-VSLLEVHKLLYFMQEAGEPLRLKYKKAHYGPYAENLRHVLNAIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAA-DRVSAAVDTVLRVIEGFEG 296 G F +G DG +P+ L D YL +R S D ++EGFE Sbjct 234 GHFILGYADGGDT--PEKPLQLVPYAIDKANVYLNKHQETRERFSKVSD----LVEGFES 287 Query 297 PYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVAL 345 P+G+ELL+S HW+ E A W +RK + +S +I +AL Sbjct 288 PFGLELLSSVHWLIKYEKLNRLEEVVQATHAWNERKQQ-FSLRQIKLAL 335 >gi|333979006|ref|YP_004516951.1| Appr-1-p processing domain-containing protein [Desulfotomaculum kuznetsovii DSM 6115] gi|333822487|gb|AEG15150.1| Appr-1-p processing domain protein [Desulfotomaculum kuznetsovii DSM 6115] Length=346 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 158/351 (46%), Positives = 213/351 (61%), Gaps = 16/351 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y GD+L+A+ EALVNTVNCVGVMG+GIALQFK +PE F AY AC+RGEV G+M Sbjct 3 MIRYVRGDILQAEAEALVNTVNCVGVMGRGIALQFKNAFPENFKAYVAACRRGEVQPGRM 62 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV DTG+L P++IINFPTK+HWR S++ I+AGL L++ +RE NI SVA+PPLG G Sbjct 63 FVFDTGRLTWPRYIINFPTKRHWRNKSRIEDIEAGLTALVKELRERNIRSVAIPPLGSGL 122 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPP---SGGSRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW++V + A LP+VD ++ P R E +MT GRA ++ + R Sbjct 123 GGLDWKEVRPLVERALATLPNVDVQVFEPGDTPADIRVNNSREIPKMTPGRAALVGLINR 182 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y R A+ DP I+ LE+ KLMYF + L L F YGPY+E +RH+L +E Sbjct 183 Y---RAAL---LDPV-ITLLEVHKLMYFLQASGEPLRLRFVKAPYGPYAENLRHVLHAIE 235 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G VG DG + P T A+ D A A + V+R++EGFE P Sbjct 236 GYLIVGYKDG-----GDVPGKQLTIVPGAVRDAEAFLEKNIETRARFERVVRLVEGFETP 290 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 +G+ELL++ HW+ T+E ++P AV W RK R ++ +I +A DR+ Sbjct 291 FGLELLSTVHWLITKEQLQDPEALIEAVYAWAPRKRR-FTPAQIEIATDRL 340 >gi|261344445|ref|ZP_05972089.1| appr-1-p processing enzyme family protein [Providencia rustigianii DSM 4541] gi|282567350|gb|EFB72885.1| appr-1-p processing enzyme family protein [Providencia rustigianii DSM 4541] Length=348 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 154/351 (44%), Positives = 217/351 (62%), Gaps = 24/351 (6%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 +I GDLLRAD EA++NTVNCVGVMG+GIALQFK+ +P+ F AY ACK+ +V GKM Sbjct 3 VIEITRGDLLRADVEAIINTVNCVGVMGRGIALQFKKAWPDNFKAYADACKKKQVQPGKM 62 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ T +L P+ IINFPTK+HWR S + ID+GL L++ IR+L I S+A+PPLG G Sbjct 63 FIFTTQELANPRFIINFPTKRHWRGASLIEDIDSGLSALVKDIRKLGIKSIAIPPLGAGL 122 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPS---GGSRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW V Q++ +A + L DV +IY PS G R + E +MT GRAV++E ++R Sbjct 123 GGLDWTIVRQKIETAMEPLDDVHVLIYEPSEDVGNVRVAQQQEIPKMTTGRAVLIELIQR 182 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL + +++P IS LE+ KL+YF EA L L + YGPY+E +RH+L +E Sbjct 183 YL--KGSLDP-----SISLLEVHKLLYFMQEAGEPLRLKYQKAHYGPYAENLRHVLNIIE 235 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLA----TDAAADRVSAAVDTVLRVIEG 293 G F G DG + N+ + L + + +L T +RVSA ++EG Sbjct 236 GHFISGYVDGGD--IPNKELHLISGSVEMAQKFLQQYPETRERFERVSA-------LVEG 286 Query 294 FEGPYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVA 344 FE P G+ELLA+ HW+ E AK AA+ +W +RK +I ++ ++ +A Sbjct 287 FESPQGLELLATVHWLHKYEQAKTTQELLAALDEWNERK-QIMTERQVQIA 336 >gi|126667034|ref|ZP_01738009.1| Appr-1-p processing enzyme family protein [Marinobacter sp. ELB17] gi|126628440|gb|EAZ99062.1| Appr-1-p processing enzyme family protein [Marinobacter sp. ELB17] Length=347 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 154/354 (44%), Positives = 216/354 (62%), Gaps = 17/354 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y +GD+LR D +A++NTVNCVGVMG+GIALQFK+ +P+ F AY ACK +V G+M Sbjct 1 MIEYKTGDILREDADAIINTVNCVGVMGRGIALQFKKAFPDNFKAYAAACKNRQVEPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TGQL P++I+NFPTK+HWR S+L IDAGL L+ I + I S+A+PPLG G Sbjct 61 FVFETGQLTAPRYIVNFPTKRHWRGASRLEDIDAGLKALVDTIHQYQIQSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLR---MTWGRAVILEAMRR 177 GGLDW +V+ R+ SA + L DV ++Y P G A + V+ + MT GRA ++E + R Sbjct 121 GGLDWSEVKPRIESALRPLGDVRVIVYEPKGAPPAQKMVQNRKVPEMTAGRAALVELVNR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL DP+ ++ LE+ KLMYF EA L L + YGPY+E +RH+L +E Sbjct 181 YLGG------LLDPS-VTLLEVHKLMYFMQEAGEPLRLKYQKAGYGPYAENLRHVLNAVE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G G DG ++P+ L D + +L D +S D V +++EGFE P Sbjct 234 GHLLSGYADGGD--APDKPLQLVPGAVDDASRFLLQH--PDTLS-RFDKVAQLVEGFESP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMT 351 +G+ELL++ HWV +E A A V W RK + +S+ +I +A R+L T Sbjct 289 FGLELLSTVHWVIKKESASTREQAIRQVYDWNDRKHQ-FSERQIELAA-RVLET 340 >gi|37522940|ref|NP_926317.1| hypothetical protein glr3371 [Gloeobacter violaceus PCC 7421] gi|35213942|dbj|BAC91312.1| glr3371 [Gloeobacter violaceus PCC 7421] Length=345 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 150/349 (43%), Positives = 207/349 (60%), Gaps = 16/349 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 M+ GD+L AD EAL+NTVNCVGVMG+G+ALQF++ YPE F AYE ACKR EV +G++ Sbjct 1 MVELTKGDILSADAEALINTVNCVGVMGRGVALQFRKAYPENFKAYESACKRKEVRLGEV 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV D P++IINFPTK HW+ S+L+YI++GL LI + +L I S+A+PPLG G Sbjct 61 FVHDLHSFINPRYIINFPTKDHWKGSSRLSYIESGLRSLIGEVEKLGIRSLALPPLGCGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAI---EGVEGLRMTWGRAVILEAMRR 177 GGLDW +V + +AF Q+P V +++ P G + + M+ G+AV+L M R Sbjct 121 GGLDWREVRPLIEAAFAQVPWVHVLLFEPVGAPSPATMPKSNKKPSMSPGKAVLLGLMDR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL M+P+ ++ LE+ KLMYF EA L L++T G YGPY+E +RH+L ++ Sbjct 181 YLAA--LMDPF-----VTLLELHKLMYFMQEAGEALRLNYTKGTYGPYAENLRHVLNAID 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G + G GDG + P +A+ LA + + V+ +IEGFE Sbjct 234 GHYISGYGDGE-----DSPTKQIEPNAEAVGMALAFLEECPQTRERFERVIDLIEGFETS 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALD 346 YG+ELL++ HWVA EGA P A W RK R + I VA D Sbjct 289 YGMELLSTVHWVAKTEGAGTPEKAVQFTHAWNDRK-RTFEPRHIRVAWD 336 >gi|336317682|ref|ZP_08572533.1| Putative phosphatase, C-terminal domain of histone macro H2A1 like protein [Rheinheimera sp. A13L] gi|335878029|gb|EGM75977.1| Putative phosphatase, C-terminal domain of histone macro H2A1 like protein [Rheinheimera sp. A13L] Length=344 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 151/341 (45%), Positives = 211/341 (62%), Gaps = 25/341 (7%) Query 2 ITYGSGDLLRA-DTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 I +GDLL+ D +A++NTVNCVGVMGKGIALQFK+++P + AY ACK G+V +G+M Sbjct 3 IESSTGDLLKQQDVDAIINTVNCVGVMGKGIALQFKKKWPANYQAYANACKAGQVQLGRM 62 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ D G L P++IINFPTK HWR PS LA ID+GL DL+ I+ L+I SVA+PPLG GN Sbjct 63 FIFDLGALATPRYIINFPTKGHWRNPSVLADIDSGLQDLVTQIKALDIRSVAMPPLGCGN 122 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSG---GSRAIEGVEGLRMTWGRAVILEAMRR 177 GGL+W +V + + F +LPDV ++ PS +R +MT GRA IL + Sbjct 123 GGLNWAEVRPLIEAYFVKLPDVTLRLFDPSETAVDARLEINTTEPKMTAGRAAILALLEC 182 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y +A+ G+S LE+QKL YF EA DL L + +GPY++++RH+L M+ Sbjct 183 Y----QAVS-----YGLSKLEVQKLAYFLQEAGEDLKLSYQKHNFGPYADQLRHVLDRMD 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITD---YLATDAAADRVSAAVDTVLRVIEGF 294 G + G+GDG S T +A+ +LAT A + V+ V ++IEGF Sbjct 234 GHYIHGVGDGVVE-------SAITPNLNALARAKAFLAT--AKPDLKTRVERVAQLIEGF 284 Query 295 EGPYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRI 335 + P+G+ELLAS HWVA +EGA+ A ++ W RK ++ Sbjct 285 QSPFGMELLASVHWVAKQEGAQNAQQALQKIQSWNPRKNQL 325 >gi|257095820|ref|YP_003169461.1| Appr-1-p processing domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048344|gb|ACV37532.1| Appr-1-p processing domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length=353 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 156/351 (45%), Positives = 208/351 (60%), Gaps = 24/351 (6%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y SGD+L+ T+ALVNTVNCVGVMG+GIALQFK YPE F AY AC+RGEV G+M Sbjct 1 MIEYASGDILKCATDALVNTVNCVGVMGRGIALQFKHAYPENFRAYAAACRRGEVQPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TGQL P +IINFPTK+HWR S++ I+AGL+ L+ VIR I S+A+PPLG G Sbjct 61 FVFETGQLTAPCYIINFPTKRHWRGKSRIEDIEAGLVALVEVIRARRIRSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRA---IEGVEGLRMTWGRAVILEAMRR 177 GGLDW +V R+ +A L DV +I P G + + E MT GRA ++E M R Sbjct 121 GGLDWVEVRPRIEAALAGLADVRVMILEPRGAPTSEAMVHSREVPGMTAGRAALVELMHR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL ++P+ ++ LE+ KLMYF EA L L + YGPY+E +RH+L +E Sbjct 181 YLGG--LLDPF-----VTLLEVHKLMYFMQEAGEPLKLKYVKAPYGPYAENLRHVLHLIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLA----TDAAADRVSAAVDTVLRVIEG 293 G G DG ++P++L + + +LA T +RV+A VD G Sbjct 234 GHLIAGYADGGD--APDKPLTLVPGAVEDASSFLAQHPETRERFNRVAALVD-------G 284 Query 294 FEGPYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVA 344 FE +G+ELL++ HWV E AV W RK R ++ +IG+A Sbjct 285 FESSFGLELLSTVHWVMKHESVTTLDDLVEAVYAWNSRKRR-FTRRQIGIA 334 >gi|339998309|ref|YP_004729192.1| putative prophage protein [Salmonella bongori NCTC 12419] gi|339511670|emb|CCC29379.1| hypothetical prophage protein [Salmonella bongori NCTC 12419] Length=350 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 149/351 (43%), Positives = 208/351 (60%), Gaps = 16/351 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y GD+L+++TEA++NTVNCVGVMG+GIALQFK YP+ F AY ACK G+V GKM Sbjct 1 MIEYRHGDILQSETEAIINTVNCVGVMGRGIALQFKNAYPDNFKAYAAACKAGQVIPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TG+L GP++IINFPTK+HW+ S++ I AGL DL+ VIR +I S+A+PPLG G Sbjct 61 FVFETGRLTGPRYIINFPTKRHWKGKSRIEDIVAGLDDLVSVIRHYDIHSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGG---SRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW DV+ + SA + L V IY P G R E +MT GRA ++E M+R Sbjct 121 GGLDWLDVKPLIESAVRPLEGVQVEIYDPKGAPSSERMAHKTEVPKMTPGRAALVELMQR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL ++P+ IS LE+ KLMYF E+ L L + YGPY+E +RH+L +E Sbjct 181 YLNG--LLDPF-----ISLLELHKLMYFMQESGEPLRLKYQKAHYGPYAENLRHVLNAIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G G DG + ++ + L + YL + V +++GFE P Sbjct 234 GHMISGYSDGGD--IPDKQLMLVPGAAEEAKRYLERQ---EDTRMRFQKVSELVDGFESP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 +G+ELL++ HW E P + W +RK R ++ +I +A+D + Sbjct 289 FGLELLSTVHWAMRHESLTSPEDVTEYIYAWNERK-RQFTPRQISLAVDTL 338 >gi|237654250|ref|YP_002890564.1| Appr-1-p processing domain-containing protein [Thauera sp. MZ1T] gi|237625497|gb|ACR02187.1| Appr-1-p processing domain protein [Thauera sp. MZ1T] Length=351 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 156/353 (45%), Positives = 207/353 (59%), Gaps = 19/353 (5%) Query 1 MITYGSGDLLRAD-TEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGK 59 MI GDLL+ D +A+VNTVNCVGVMGKGIALQFK ++P+ F Y ACK G+V G+ Sbjct 1 MIKLTQGDLLKQDDVDAIVNTVNCVGVMGKGIALQFKNKWPDNFAEYAAACKAGQVRPGR 60 Query 60 MFVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVG 119 MF+ D+G L P +IINFPTK HWR S++A+I GLIDL+ +R L I S+A+PPLG G Sbjct 61 MFIHDSGGLVKPNYIINFPTKDHWRGASRMAFIRDGLIDLVTQVRRLGIRSIAIPPLGCG 120 Query 120 NGGLDWEDVEQRLVSAFQQLPDVDAVIYPPSG--GSRAIE-GVEGLRMTWGRAVILEAMR 176 NGGLDW V + ++F+ LPDV+ ++ P G + +E + RMT GRA I++ + Sbjct 121 NGGLDWTQVRPLIEASFEALPDVEVRLFEPGGAPNPKTMEVRTKRPRMTPGRAAIVKVLS 180 Query 177 RYLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 Y E G+S +E+QKL YF EA L L F YGPYS+ +RH L M Sbjct 181 TY---------GELNYGLSKIEVQKLAYFLQEAGEPLQLQFVKHHYGPYSDTLRHALNTM 231 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEG 296 EG F GLGDG I T ++A + + +SA V+ V R+I+G++ Sbjct 232 EGHFIRGLGDGVVEA----EIEPTEDALAEAEAFIANEGHS-ALSARVERVGRLIDGYQS 286 Query 297 PYGVELLASTHWVATRE-GAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 YG+ELLAS HWVA E G + A AV W RK + D + A R+ Sbjct 287 SYGMELLASVHWVAAHEPGVRSVDEAITAVHGWNDRKKLLMQPDHVKFAWHRL 339 >gi|154253369|ref|YP_001414193.1| appr-1-p processing domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157319|gb|ABS64536.1| Appr-1-p processing domain protein [Parvibaculum lavamentivorans DS-1] Length=345 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 152/348 (44%), Positives = 207/348 (60%), Gaps = 13/348 (3%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 +I + +GD+L AD EALVNTVNCVG+MG+GIALQFK +PE F AY+ AC EV GKM Sbjct 5 VIEFRTGDILDADVEALVNTVNCVGIMGRGIALQFKNAFPENFKAYKAACDCQEVQPGKM 64 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +T + GP+ +INFPTK+HWR S++ ID+GL L+ IR+ I S+AVPPLG G Sbjct 65 FVFETHKFTGPRFVINFPTKRHWRGKSRMEDIDSGLKALVGEIRQRGIRSIAVPPLGSGL 124 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQ 180 GGL W DV R+ +A Q + + +++ PS + E +MT GRA ++ M RYL Sbjct 125 GGLVWADVRPRIKAALQDIEGLKVIVFEPSAAVVTTKSREIPKMTAGRAALVVLMYRYLG 184 Query 181 QRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAF 240 M+P+ ++ LEI KL+YF EA L L + YGPY+E +RH+L +EG Sbjct 185 G--LMDPF-----VTLLEIHKLLYFMQEAGESLRLKYAKAPYGPYAENLRHVLSAVEGHL 237 Query 241 TVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGV 300 G DG ++ I L YL D D +S D V +++EGFE P+G+ Sbjct 238 VSGYADGGD--TPDKQIELVPGAVQDAEAYL--DHNTDTIS-RFDRVGKLVEGFETPFGL 292 Query 301 ELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 ELLA+ HWV TRE A AA V W+ RK R ++ +I +A D + Sbjct 293 ELLATVHWVVTRENASSAEEAAEKVYAWSDRKKR-FTPRQIAIAFDTL 339 >gi|307154520|ref|YP_003889904.1| Appr-1-p processing domain-containing protein [Cyanothece sp. PCC 7822] gi|306984748|gb|ADN16629.1| Appr-1-p processing domain protein [Cyanothece sp. PCC 7822] Length=349 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 150/355 (43%), Positives = 213/355 (60%), Gaps = 24/355 (6%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+LL ADTEALVNTVN VGVMGKGIALQFK+ YPE F AY+KAC +V G+M Sbjct 1 MIEFKQGNLLEADTEALVNTVNTVGVMGKGIALQFKQAYPENFRAYKKACDAQQVKPGQM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ L PK+IINFPTK HWR SKL I+ GL LI +++L I S+AVPPLG GN Sbjct 61 FIFVANSLFNPKYIINFPTKTHWRGKSKLEDIETGLKALIEEVKQLEIKSIAVPPLGCGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSG---GSRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW +V+ +V AF QLP+V +I+ P G + MT RA+++ Sbjct 121 GGLDWAEVKPMIVGAFAQLPEVKVIIFEPIGTPVSDKMQVNTAKPEMTRARALLI----- 175 Query 178 YLQQRRAMEPWEDPA-GISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 R +E + P ++ LEIQKL YF EA L L + ++GPY++ + H+LQ + Sbjct 176 -----RLLELYNIPGYSLTKLEIQKLAYFLQEAGEPLKLRYVKDQFGPYADNLNHVLQRL 230 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEG 296 +G + G GD + + + + +G++A +L D A+ ++ V +I GFE Sbjct 231 DGHYIRGYGDRSQK----SQMYVLPEGSEAAHQFLEQDPDAN---IRLERVSNLIFGFET 283 Query 297 PYGVELLASTHWVATRE---GAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 PYG+E+LA+ HWVA +E A +P A V++W++RK I+ + + A +R+ Sbjct 284 PYGMEMLATVHWVAIQEDTQAAIDPECAICRVQQWSERKRNIFKPNHLRKAWERL 338 >gi|343506027|ref|ZP_08743548.1| appr-1-p processing domain-containing protein [Vibrio ichthyoenteri ATCC 700023] gi|342804598|gb|EGU39911.1| appr-1-p processing domain-containing protein [Vibrio ichthyoenteri ATCC 700023] Length=346 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 148/347 (43%), Positives = 206/347 (60%), Gaps = 16/347 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI GD+LRAD EA+VNTVNCVGVMG+GIALQFK+ +P+ F AYE ACK +V GKM Sbjct 1 MIEITRGDILRADAEAIVNTVNCVGVMGRGIALQFKKAWPDNFKAYEVACKSKDVQPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ +TGQL P+ I+NFPTK+HWR S++ I++GL L+ I+ L I S+A+PPLG G Sbjct 61 FIFETGQLANPRFIVNFPTKRHWRGASRIEDIESGLAALVEDIQHLGIKSIAIPPLGAGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSG---GSRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW V +++ +A + L DV ++Y PSG R E +MT GRAV++E M+R Sbjct 121 GGLDWLVVREKIEAAMKPLTDVQVLLYEPSGAPQNDRIARQKEVPKMTAGRAVLIELMQR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL + ++P +S LE+ KL+YF EA L L + YGPY++ +RH+L +E Sbjct 181 YL--KGLLDP-----SVSLLEVHKLLYFMQEAGEPLRLKYQKAHYGPYAQNLRHVLNAIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G F G DG + P + AI + A + V R++EGFE P Sbjct 234 GHFVSGYSDG-----GDAPDKVLQLVPGAIKEAQAYLEQHPDTRERFEKVSRLVEGFESP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVA 344 G+ELLA+ HW+ E A+ V W RK + ++ +I +A Sbjct 289 QGLELLATVHWLNRYEQARNTDQVIEGVHSWNARKQQ-FTPRQISIA 334 >gi|332525725|ref|ZP_08401873.1| Appr-1-p processing domain protein [Rubrivivax benzoatilyticus JA2] gi|332109283|gb|EGJ10206.1| Appr-1-p processing domain protein [Rubrivivax benzoatilyticus JA2] Length=359 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 158/354 (45%), Positives = 210/354 (60%), Gaps = 22/354 (6%) Query 1 MITYGSGDLLRAD-TEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGK 59 MI GDLL+ D +A+VNTVNCVGVMGKGIALQFK ++P+ F AY ACK G+V G+ Sbjct 1 MIKLTQGDLLKQDDVDAIVNTVNCVGVMGKGIALQFKNKWPDNFDAYAAACKAGQVRPGR 60 Query 60 MFVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVG 119 MFV D+G L P I+NFPTK HWR S +A+I GL+DL+ +R L I S+AVPPLG G Sbjct 61 MFVFDSGGLVKPNFIVNFPTKDHWRGSSDIAFIRDGLVDLVSQVRRLGIRSIAVPPLGCG 120 Query 120 NGGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGG--SRAIE-GVEGLRMTWGRAVILEAMR 176 NGGLDW +V + +AF +PDV+ ++ P +++E RMT GRA I++ + Sbjct 121 NGGLDWSNVRPLIEAAFADVPDVEVRLFEPGAAPQPKSMEVRTRRPRMTPGRAAIVKMLD 180 Query 177 RYLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 Y R + G+S +E+QKL YF EA L L F YGPYS+ +RH L M Sbjct 181 TY----RGLN-----YGLSRIEVQKLAYFLQEAGGPLGLHFVKHHYGPYSDPLRHALNKM 231 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADR-VSAAVDTVLRVIEGFE 295 EG + G+GDGT + DA+ + A AA ++ V V R+I+G++ Sbjct 232 EGHYIRGMGDGTVE-------AEIEPTEDALAEAEAFIAAQHSDLAEQVARVGRLIDGYQ 284 Query 296 GPYGVELLASTHWVATR-EGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 YG+ELLAS HWVATR EG A AAV+ W RK R+ + + A R+ Sbjct 285 SSYGMELLASVHWVATREEGVTSSDDALAAVQAWNDRKRRLMKREHVAAAWQRL 338 >gi|339481726|ref|YP_004693512.1| Appr-1-p processing domain-containing protein [Nitrosomonas sp. Is79A3] gi|338803871|gb|AEJ00113.1| Appr-1-p processing domain protein [Nitrosomonas sp. Is79A3] Length=352 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 148/349 (43%), Positives = 203/349 (59%), Gaps = 16/349 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y GD+LR + EA++NTVNCVGVMG+GIALQFK+ +P+ F AY ACK+ EV GKM Sbjct 1 MIEYKQGDILRENAEAIINTVNCVGVMGRGIALQFKKAFPQNFLAYAAACKKKEVQPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TGQL P++IINFPTK+HWR S++ IDAGL L+ I+ NI S+A+PPLG G Sbjct 61 FVFETGQLANPRYIINFPTKRHWRGASRMEDIDAGLRALVETIQRYNIKSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGV---EGLRMTWGRAVILEAMRR 177 GGLDW DV+ R+ + Q L D+ +IY P A + V E +MT GRA ++E MRR Sbjct 121 GGLDWTDVKPRIEAVLQPLTDLRVMIYGPQSAPAAEKMVYNREVPKMTAGRAALVELMRR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL ++P+ ++ LE+ KLMYF A L L + YGPY+E +RH+L +E Sbjct 181 YLGG--LLDPY-----VTLLEVHKLMYFMQAAGEPLKLKYQKASYGPYAENLRHVLNAIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G G DG + P A+ D A D V ++EGFE P Sbjct 234 GHLVSGYADG-----GDAPDKTLQLVPGAVEDAAAFLQQHPDTRERFDKVSALVEGFESP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALD 346 +G+ELL++ HW+ E W++RK R ++ +I +A+ Sbjct 289 FGLELLSTVHWIMKNETVSSINDVVKHTYAWSERK-RQFTLRQIELAMQ 336 >gi|329889716|ref|ZP_08268059.1| hypothetical protein BDIM_14050 [Brevundimonas diminuta ATCC 11568] gi|328845017|gb|EGF94581.1| hypothetical protein BDIM_14050 [Brevundimonas diminuta ATCC 11568] Length=349 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 159/356 (45%), Positives = 206/356 (58%), Gaps = 27/356 (7%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MIT+ GDLL++ EA++NTVNCVGVMGKGIALQFK+ +P + AY +AC GEV +G+M Sbjct 1 MITFSKGDLLQSGAEAVINTVNCVGVMGKGIALQFKQAFPRNYDAYRRACDAGEVRLGEM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV DTG + P+ IINFPTK HW+A S+L+ I+ GL DL RVI E I S+AVPPLG GN Sbjct 61 FVFDTGSMINPRWIINFPTKGHWKAKSRLSDIETGLEDLKRVILENGIRSIAVPPLGCGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIE---GVEGLRMTWGRAVILEAMRR 177 GGLDW +VE + A L +VD ++ P + E G M+ GRA++L + Sbjct 121 GGLDWAEVEPVIRRALGDLNEVDVRLFAPGAAPKVDEMRVGTTRPNMSRGRALVLTLLGL 180 Query 178 YLQQRRAMEPWEDPAGISH--LEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQG 235 Y AG H LE+QKL YF A DL L F +YGPY+E + H+LQ Sbjct 181 Y-----------GAAGYRHSLLEVQKLTYFLQAAGEDLKLGFQKYQYGPYAENLNHVLQR 229 Query 236 MEGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAA-DRVSAAVDTVLRVIEGF 294 +EG F G GD + I++ G YLA D AA DR +D V +I GF Sbjct 230 IEGHFIRGYGDRSQAA----EIAVLEGGRREAEAYLAGDEAARDR----LDRVAELIAGF 281 Query 295 EGPYGVELLASTHWVATR--EGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 E PYG+ELL++ HWV E + +P AV W RK + + I ALD + Sbjct 282 ETPYGLELLSTVHWVLVHDAEASGDPDRVVQAVHAWNSRKAAVMREPHIRTALDHL 337 >gi|56421652|ref|YP_148970.1| hypothetical protein GK3117 [Geobacillus kaustophilus HTA426] gi|56381494|dbj|BAD77402.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length=344 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 147/349 (43%), Positives = 207/349 (60%), Gaps = 21/349 (6%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI G+LL + EALVNTVNCVGVMGKGIALQFK+ YPEMF+ YEKAC+R EV GKM Sbjct 1 MIILKQGNLLEDEAEALVNTVNCVGVMGKGIALQFKQAYPEMFSEYEKACRRKEVQPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 VV T L PK+IINFPTK+HW+ S++ I+ GL DLI+V++ELNI S+A+PPLG GN Sbjct 61 HVVSTKSLLNPKYIINFPTKRHWKNKSRMEDIELGLADLIKVVKELNIKSIALPPLGCGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIE---GVEGLRMTWGRAVILEAMRR 177 GGL W++V ++ +AF+ L +V+ +Y P+G + + +MT RA++L M Sbjct 121 GGLRWDEVRPKIEAAFKHLKEVEVHLYEPAGSPNPDQIKIRTKPPKMTRSRALLLMLMND 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y ++ ++ +S LE+QKL YF + L F G+YGPY++ + H+L ++ Sbjct 181 Y-----SIPGYK----LSLLEVQKLAYFLQVVGEPMRLRFEKGKYGPYADNLNHVLLRLD 231 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G F G GD + I L YL D+ AD ++ V VI+GFE P Sbjct 232 GHFIRGFGDRN----RDAEIYLLPNAVQEAEQYLQGDSEADE---HLEKVRNVIQGFETP 284 Query 298 YGVELLASTHWVATREG--AKEPATAAAAVRKWTKRKGRIYSDDRIGVA 344 YG+ELL++ HWV + + + W +RK +I+ + I A Sbjct 285 YGLELLSTVHWVVKENPDIKDDVRSIIEEIHNWNERKRKIFKEKHITKA 333 >gi|120608869|ref|YP_968547.1| appr-1-p processing domain-containing protein [Acidovorax citrulli AAC00-1] gi|120587333|gb|ABM30773.1| Appr-1-p processing domain protein [Acidovorax citrulli AAC00-1] Length=353 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 157/352 (45%), Positives = 209/352 (60%), Gaps = 21/352 (5%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI SGD+L+ D++A+VNTVNCVG+MG+GIALQFK +PE F AY+ AC R EV G+M Sbjct 1 MIELTSGDILKDDSDAIVNTVNCVGIMGRGIALQFKNAWPENFKAYKAACDREEVQPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ DT QL P++I+NFPTK+HW+ S++ IDAGL L+R + L I S+A+PPLG G Sbjct 61 FIYDTEQLAAPRYIVNFPTKRHWKGKSRMQDIDAGLEALVRDVARLGIRSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRA---IEGVEGLRMTWGRAVILEAMRR 177 GGL+W++V R+ +A Q LPDV IY P G A E RMT GRA ++E M R Sbjct 121 GGLEWDEVRPRIEAAMQALPDVRVRIYEPKGAPAADKMQHSREVPRMTAGRAALVELMNR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y+Q DP IS LE+ KLMYF EA L L + YGPY+E +RH+LQ +E Sbjct 181 YVQGLL------DPT-ISLLEVHKLMYFMQEAGEPLRLSYVKAPYGPYAENLRHVLQKIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G G DG + P T A+ + A A D V ++EGFE P Sbjct 234 GHMVAGYADG-----GDDPTKPLTVVPGAVEEAGAFLGEHVDTRARFDRVGDLVEGFETP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRK---WTKRKGRIYSDDRIGVALD 346 +G+ELLA+ HWVA+ A VR+ W RK + ++ +IG+AL+ Sbjct 289 FGLELLATVHWVASHTVAG--GGVEDVVRETHAWNDRK-KQFTPRQIGIALN 337 >gi|119483245|ref|ZP_01618659.1| hypothetical protein L8106_04311 [Lyngbya sp. PCC 8106] gi|119458012|gb|EAW39134.1| hypothetical protein L8106_04311 [Lyngbya sp. PCC 8106] Length=354 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 145/355 (41%), Positives = 211/355 (60%), Gaps = 25/355 (7%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+L++ + EALVNTVNCVGVMGKGIALQFK+ +PE F Y+K C+ E+ GKM Sbjct 1 MIEFKEGNLIKENIEALVNTVNCVGVMGKGIALQFKQAFPENFKQYKKGCEAKEIQPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F TG+L P++IINFPTK+HW+ SK+ I +GL L+ +++L I S+A+PPLG GN Sbjct 61 FTTSTGKL-FPRYIINFPTKRHWKGKSKIEDIASGLKALVEEVQQLKIKSIAIPPLGCGN 119 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIE---GVEGLRMTWGRAVILEAMRR 177 GGLDW V+ +V+AF + DV VI+ P A + + +MT RA+ + Sbjct 120 GGLDWVQVKPMIVNAFAEFTDVKIVIFEPGSAPVADKIQVATKKTKMTLARALFI----- 174 Query 178 YLQQRRAMEPWEDPA-GISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 R +E + P ++ LEIQKL YF EA L L++ YGPY++ + H+LQ + Sbjct 175 -----RLLELYAIPGYQLTKLEIQKLAYFLQEAQEPLKLNYEKHLYGPYADNLNHVLQAL 229 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEG 296 +G F G GD + R + + +G+ A YL A+ A V +I GFE Sbjct 230 DGHFIRGYGDRSQR----SQMYVLPEGSKAAHSYLEKHPEANNRLAKVSN---LITGFET 282 Query 297 PYGVELLASTHWVATRE---GAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 PYG+E+LA+ HWV TRE A++ A A V++W +RK +++ + A +R+ Sbjct 283 PYGMEMLATIHWVVTREDPQAAEDCERAIALVQQWNERKRKLFKPSHLRKAWERL 337 >gi|74317507|ref|YP_315247.1| Appr-1-p processing protein [Thiobacillus denitrificans ATCC 25259] gi|74057002|gb|AAZ97442.1| Appr-1-p processing protein [Thiobacillus denitrificans ATCC 25259] Length=331 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 148/338 (44%), Positives = 205/338 (61%), Gaps = 18/338 (5%) Query 15 EALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKMFVVDTGQLDGPKHI 74 +A+VNTVNCVGVMGKGIALQFK ++P ++AYE ACK +V G MFV D+G L P +I Sbjct 2 DAIVNTVNCVGVMGKGIALQFKNKWPANYSAYEAACKAKQVRPGTMFVFDSGGLVKPNYI 61 Query 75 INFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGNGGLDWEDVEQRLVS 134 INFPTK HWR S++ +I GL+DL+ ++ L I S+A+PPLG GNGGL+W++V + Sbjct 62 INFPTKDHWRGKSRVEFIRDGLVDLVAQVKRLGIRSIAIPPLGCGNGGLEWDEVRPLIEQ 121 Query 135 AFQQLPDVDAVIYPPSGG--SRAIE-GVEGLRMTWGRAVILEAMRRYLQQRRAMEPWEDP 191 AF LPDV+ ++ P+G +++E +MT GRA IL+ + Y R++E Sbjct 122 AFAVLPDVEVRLFAPAGAPDPKSMEVKTSRPKMTAGRAAILKVLDTY----RSLE----- 172 Query 192 AGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAFTVGLGDGTARV 251 G+S +E+QKL YF EA L+L F +YGPYS+++RH L MEG F GLGDG Sbjct 173 YGLSRIEVQKLAYFLQEAGESLSLSFVKNQYGPYSDQLRHALNRMEGHFIRGLGDG---- 228 Query 252 LANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGVELLASTHWVAT 311 + + I Y++ A ++ V+ V +IEGF+ PYG+ELLA+ HWVAT Sbjct 229 VVDAEIEPLEDALAEAEQYVSASGHA-ALARHVERVANLIEGFQTPYGMELLATVHWVAT 287 Query 312 RE-GAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 E A +AV W +RK RI + A R+ Sbjct 288 HEPTAHSFDQVVSAVHAWNERKARIMQPAHVRAAWSRL 325 >gi|38505776|ref|NP_942395.1| hypothetical protein sll8001 [Synechocystis sp. PCC 6803] gi|38423800|dbj|BAD02009.1| sll8001 [Synechocystis sp. PCC 6803] Length=348 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/353 (42%), Positives = 210/353 (60%), Gaps = 24/353 (6%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 M SG++L DTEALVNTVNCVGVMG+GIALQFK+ +PE F AY +ACK +V G+M Sbjct 1 MFECKSGNILTEDTEALVNTVNCVGVMGRGIALQFKKAFPENFKAYAQACKEEKVKPGEM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV TGQL P+ IINFPTK+HWR S++ I+ GL L I++ I S+A+PPLG G Sbjct 61 FVFQTGQLVNPRFIINFPTKRHWRTHSRIDDIENGLKALKCTIQKYKIRSIAIPPLGCGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLR---MTWGRAVILEAMRR 177 GGLDW +V+ R+ + L +V ++Y P G + V+ LR MT GRAV++E + R Sbjct 121 GGLDWAEVKTRIEVILKPLDNVQIILYEPHGELSQAKTVQSLRAPKMTPGRAVLVELVSR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YLQ ++P+ I+ LEI KLMYF E+ L L + YGPY+E +RH+L +E Sbjct 181 YLQG--LLDPF-----ITLLEIHKLMYFMQESGEFLQLRYAKAPYGPYAENLRHVLNVIE 233 Query 238 GAFTVGLGDGTARVLANQPISL----TTKGTDAITDYLATDAAADRVSAAVDTVLRVIEG 293 G G DG + N+PI+L K T + DY T ++V+ ++EG Sbjct 234 GHLITGYADGGDQ--PNKPIALLPNAIEKATTFLQDYPETHTRFEKVTD-------LVEG 284 Query 294 FEGPYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALD 346 FE P+G+ELL++ HW+ E + W +RK + ++ +I +A++ Sbjct 285 FESPFGLELLSTVHWIVKNEPVNSLSDVIDRTYAWNQRKQQ-FTQRQIELAVN 336 >gi|146294613|ref|YP_001185037.1| appr-1-p processing domain-containing protein [Shewanella putrefaciens CN-32] gi|145566303|gb|ABP77238.1| Appr-1-p processing domain protein [Shewanella putrefaciens CN-32] Length=346 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/348 (42%), Positives = 206/348 (60%), Gaps = 18/348 (5%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI GD+LRADTEA+VNTVNCVGVMG+GIALQFK+ +P+ F AY AC V GKM Sbjct 1 MIEITHGDILRADTEAIVNTVNCVGVMGRGIALQFKKAWPDNFKAYAAACNSKNVQPGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ +TGQL P+ IINFPTK+HW+ S++ I++GL+ L+ I+ L I S+A+PPLG G Sbjct 61 FIFETGQLANPRFIINFPTKRHWKGASRIEDIESGLVALVADIQRLGIKSIAIPPLGAGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSG---GSRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW V ++ +A Q L DV ++Y P+G R + E +MT GRAV++E M+R Sbjct 121 GGLDWLVVRDKIEAAMQPLTDVQILLYEPAGAPQNDRIAKQKEVPKMTAGRAVLIELMQR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL+ DP +S LE+ KL+YF EA L L + YGPY++ +RH+L +E Sbjct 181 YLKGLL------DPT-VSLLEVHKLLYFMQEAGEPLRLKYEKAHYGPYAQNLRHVLNAIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDA-AADRVSAAVDTVLRVIEGFEG 296 G F G DG + + + L ++L +R + V ++EGFE Sbjct 234 GHFISGYADGGDK--PEKELRLVPGAVKEAQEFLEQHPDTRERFT----KVSELVEGFES 287 Query 297 PYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVA 344 P G+ELLA+ HW+ E + +V W RK ++++ +I +A Sbjct 288 PLGLELLATVHWLNKYEHVRSTDQVIESVHSWNTRK-QLFTARQITIA 334 >gi|284028171|ref|YP_003378102.1| Appr-1-p processing domain-containing protein [Kribbella flavida DSM 17836] gi|283807464|gb|ADB29303.1| Appr-1-p processing domain protein [Kribbella flavida DSM 17836] Length=352 Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 147/347 (43%), Positives = 204/347 (59%), Gaps = 17/347 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI +GDLLR D +ALVNTVN VG+MGKGIALQFKR +P+MF Y AC+RGEV +G M Sbjct 1 MIRNVTGDLLRQDADALVNTVNTVGIMGKGIALQFKRAWPQMFEDYVAACERGEVQLGSM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 V L P++IINFPTK+HWR+ S+L+ I+ GL DL R I +LNI S+A+PPLG GN Sbjct 61 HVWTPDALPPPRYIINFPTKQHWRSRSRLSDIETGLQDLARTIADLNITSIALPPLGCGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPD-VDAVIYPPSGGSRAIEGVEGLR---MTWGRAVILEAMR 176 GGLDW DVE + S + D I+ P+G + V + + R+ +L + Sbjct 121 GGLDWADVEPLIHSYLGPVAHKTDVRIFAPAGAPEPQKMVNREKPPPLNSTRSAMLALIH 180 Query 177 RYLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 Y+Q P + +E+QKL YF + DL ++F P YGPY++ +R L M Sbjct 181 AYVQFTFG------PPSL--IEVQKLAYFLQLSGEDLNMEFRPHIYGPYADALRRALSAM 232 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEG 296 EG + G GDG+ARV PI + + + Y+A +A + +V+ I GFE Sbjct 233 EGHYITGFGDGSARVADAAPIEVLPEAVSQVESYIAEHP---ETAARIASVMDEIAGFES 289 Query 297 PYGVELLASTHWVATREGAKEPATAAA--AVRKWTKRKGRIYSDDRI 341 YG+ELLAS HWV T + + AA AVR+W++RK +++ + Sbjct 290 AYGLELLASVHWVMTHDAEARSSLEAAHTAVRRWSQRKSTLFTPSHV 336 >gi|218295755|ref|ZP_03496551.1| Appr-1-p processing domain protein [Thermus aquaticus Y51MC23] gi|218243914|gb|EED10441.1| Appr-1-p processing domain protein [Thermus aquaticus Y51MC23] Length=360 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/356 (44%), Positives = 208/356 (59%), Gaps = 28/356 (7%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 M+ + G+LL A EALVNTVN VGVMGKG+ALQFKR +P+ + AY KAC+RG+V IG++ Sbjct 1 MLRFVRGNLLEAPVEALVNTVNTVGVMGKGVALQFKRAFPDNYQAYVKACERGQVQIGRI 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV D G L P++I NFPTKKHWR PS++ Y++ GL DL+ I+EL + S+A+PPLG GN Sbjct 61 FVYDRGPLAQPRYIFNFPTKKHWRHPSRMEYVEEGLKDLVCRIQELRVRSIALPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVE---GLRMTWGRAVILEAMRR 177 GGL W +V+QR+ A + L V+ +Y P +A V R+T RA +L+ Sbjct 121 GGLPWPEVKQRIQEALEALEGVEVWVYEPVENPKAHSIVPLKTKPRLTPARAALLKLFGL 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y EP + LE QKL YF EA DL LDF ++GPY+E + H+L +E Sbjct 181 Y---GALGEP------LGRLEAQKLAYFLQEAGLDLKLDFACKQFGPYAEPLNHVLARLE 231 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDA----ITDYLATDAAADRVSAAVDTVLRVIEG 293 G + G GD T I L + D + DY D AA R A D V +G Sbjct 232 GHYIQGFGDRT----GISQIRLKPQALDEAVLFLADYPKADEAATR---AADWV----KG 280 Query 294 FEGPYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRIL 349 FE PYG+ELLA+ HW EGA++ A+ ++ W RK + + VALD +L Sbjct 281 FETPYGLELLATVHWAVRHEGARDWASLQKRLQAWNPRKA-TFPKTHLQVALDALL 335 >gi|300868769|ref|ZP_07113380.1| Appr-1-p processing domain protein [Oscillatoria sp. PCC 6506] gi|300333330|emb|CBN58572.1| Appr-1-p processing domain protein [Oscillatoria sp. PCC 6506] Length=349 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 145/354 (41%), Positives = 206/354 (59%), Gaps = 23/354 (6%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI G+LL AD EALVNTVNCVG+MGKGIALQFK+ +PE F Y +AC+ +V G+M Sbjct 1 MIELTQGNLLDADAEALVNTVNCVGIMGKGIALQFKQAFPENFRQYAQACRSSKVQPGQM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+V TG L P++IINFPTK+HW+ S++ I+ GL LI I+ LNI S+A+PPLG GN Sbjct 61 FIVSTGNLFNPRYIINFPTKRHWKGNSRIEDIEIGLKALIAEIKRLNIKSIAIPPLGCGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGG---SRAIEGVEGLRMTWGRAVILEAMRR 177 GGL W V+ + SAF LP+V +++ P R E +MT RA+ + Sbjct 121 GGLSWTQVKPLIESAFIYLPNVKVLLFAPQNTPEVDRMRVATENPKMTRARALYI----- 175 Query 178 YLQQRRAMEPWEDPA-GISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 R +E + P ++ LEIQKL YF A L L +T +YGPY+ + H+ Q + Sbjct 176 -----RLLELYRLPGYRLTMLEIQKLAYFLQVAGESLKLQYTRDKYGPYANNLHHVFQTL 230 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEG 296 EG + G GD + + + +G A +L + A+ A ++ V R+IEGFE Sbjct 231 EGHYIRGYGDRSQEA----QVYVLPEGKKAAETFLENNPDAN---ARLERVSRLIEGFET 283 Query 297 PYGVELLASTHWVAT--REGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 PYG+ELLA+ HWV +E ++ A + V++W+ RK ++ I A R+ Sbjct 284 PYGMELLATVHWVTQEDQEAVEDVEKAISLVKEWSIRKRDLFKPQHIRKAWQRL 337 >gi|189425257|ref|YP_001952434.1| Appr-1-p processing domain-containing protein [Geobacter lovleyi SZ] gi|189421516|gb|ACD95914.1| Appr-1-p processing domain protein [Geobacter lovleyi SZ] Length=351 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 145/348 (42%), Positives = 205/348 (59%), Gaps = 16/348 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y +G++L D EA+VNTVNCVG+MG+GIALQFK YP+ F AY ACK EV G+M Sbjct 1 MIEYKTGNILAEDVEAVVNTVNCVGIMGRGIALQFKNTYPDNFKAYAAACKLNEVQPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TG+L P+ +INFPTK+HW+A S++ IDAGL+ L+ IR I+S+A+PPLG G Sbjct 61 FVYETGRLTNPRFVINFPTKRHWKAKSRIEDIDAGLVALVEEIRIRKISSIAIPPLGAGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPS---GGSRAIEGVEGLRMTWGRAVILEAMRR 177 GGLDW+ V R+ +A Q + + VI+ P+ RA + +MT GRA ++ M R Sbjct 121 GGLDWKQVRPRIEAALQGVEGLRVVIFEPAPDKADERANRSSDVPKMTPGRAALVGLMHR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL ++P+ I+ LE+ KLMYF A L L++T YGPY+E +RH+L+ +E Sbjct 181 YLAG--LLDPF-----ITLLEVHKLMYFMQAAQEPLRLNYTKAPYGPYAENLRHVLRAVE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G G DG + P A+ D ++ V ++EGFE P Sbjct 234 GHLVSGYADG-----GDAPDKQLELVPGALVDAQTFLQEQPDTVNRMNRVFELVEGFETP 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVAL 345 +G+ELLA+ HWV ++E A A V W RK R ++ +I +A+ Sbjct 289 FGLELLATVHWVVSQEQACSLEEVTARVYGWNDRK-RQFTPRQIALAV 335 >gi|288457845|ref|YP_003422713.1| Appr-1-p processing domain protein [Zymomonas mobilis subsp. mobilis ZM4] gi|285026820|gb|ADC33910.1| Appr-1-p processing domain protein [Zymomonas mobilis subsp. mobilis ZM4] Length=359 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 156/371 (43%), Positives = 213/371 (58%), Gaps = 36/371 (9%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+LL A EALVNTVN VGVMGKGIAL FK R+ E F Y ACK EV IGKM Sbjct 1 MIIFTQGNLLEAKVEALVNTVNTVGVMGKGIALMFKERFHENFRLYSAACKAKEVQIGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +L + I+NFPTK+HWR PS++ +I GL DL RV+ E NI S+A+PPLG GN Sbjct 61 FVTPVYELGETRWIVNFPTKQHWRNPSRIEWIIKGLQDLRRVLLEKNIKSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL W+DV ++ A L D+D ++ P+ + + G+ ++T RA+I E +RRY Sbjct 121 GGLSWKDVRGQIELALSDL-DIDIFVFEPTSQYQNVAKRTGVEKLTPARALIAELVRRY- 178 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANEA----DPD---LALDFTPGRYGPYSERVRHL 232 W S LEIQKL +F A PD L LDF P +YGPY+ ++ HL Sbjct 179 --------WVMGIECSLLEIQKLAWFLQRAIEQYSPDNNPLNLDFQPHKYGPYTHQLNHL 230 Query 233 LQGMEGAFTVGLGDGTARVLANQP---ISLTTKGTDAITDYLATDAAADRVSAAVDTVLR 289 L ++G++ R+ + P I K D + YL ++A R A+++ Sbjct 231 LNSLDGSYL----HSDKRISDSDPLDVILFVNKRKDDLQAYLKSEAKPYR--QALESAAM 284 Query 290 VIEGFEGPYGVELLASTHWVATREGAKEPATAA--AAVRKW------TKRKGRIYSDDRI 341 +I+GFE P+G+ELLA+ W+ TRE EP A +R W RK RI++D + Sbjct 285 LIDGFESPFGMELLATVDWLLTRENI-EPNVPALRKGLRSWRGGEDAALRKDRIFNDRSL 343 Query 342 GVALDRILMTA 352 G+ALDR+ T+ Sbjct 344 GIALDRLTKTS 354 >gi|335933057|gb|AEH63595.1| Appr-1-p processing domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length=359 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 155/367 (43%), Positives = 212/367 (58%), Gaps = 36/367 (9%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+LL A EALVNTVN VGVMGKGIAL FK R+ E F Y ACK EV IGKM Sbjct 1 MIIFTQGNLLEAKVEALVNTVNTVGVMGKGIALMFKERFHENFRLYSAACKAKEVQIGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +L + I+NFPTK+HWR PS++ +I GL DL RV+ E NI S+A+PPLG GN Sbjct 61 FVTPVYELGETRWIVNFPTKQHWRNPSRIEWIIKGLQDLRRVLLEKNIKSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL W+DV ++ A L D+D ++ P+ + + G+ ++T RA+I E +RRY Sbjct 121 GGLSWKDVRGQIELALSDL-DIDIFVFEPTTQYQNVAKRTGVEKLTPARALIAELVRRY- 178 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANEA----DPD---LALDFTPGRYGPYSERVRHL 232 W S LEIQKL +F A PD L LDF P +YGPY+ ++ HL Sbjct 179 --------WVMSIECSLLEIQKLAWFLQRAIEQYSPDNNPLNLDFQPHKYGPYTHQLNHL 230 Query 233 LQGMEGAFTVGLGDGTARVLANQP---ISLTTKGTDAITDYLATDAAADRVSAAVDTVLR 289 L ++G++ R+ + P I K D + YL ++A R A+++ Sbjct 231 LNNLDGSYL----HSDKRISDSDPLDVILFVDKRKDDLQAYLKSEAKPYR--QALESAAM 284 Query 290 VIEGFEGPYGVELLASTHWVATREGAKEPATAA--AAVRKW------TKRKGRIYSDDRI 341 +I+GFE P+G+ELLA+ W+ TRE EP +A +R W RK RI++D + Sbjct 285 LIDGFESPFGMELLATVDWLLTRENI-EPNVSALRKGLRSWRGGADAALRKDRIFNDRSL 343 Query 342 GVALDRI 348 G+ALDR+ Sbjct 344 GIALDRL 350 >gi|115375571|ref|ZP_01462829.1| appr-1-p processing protein [Stigmatella aurantiaca DW4/3-1] gi|310818320|ref|YP_003950678.1| appr-1-p processing protein [Stigmatella aurantiaca DW4/3-1] gi|115367438|gb|EAU66415.1| appr-1-p processing protein [Stigmatella aurantiaca DW4/3-1] gi|309391392|gb|ADO68851.1| Appr-1-p processing protein [Stigmatella aurantiaca DW4/3-1] Length=345 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 147/351 (42%), Positives = 206/351 (59%), Gaps = 18/351 (5%) Query 2 ITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKMF 61 I G G+LL A+ +ALVNTVN GVMGKG+ALQFK+ +PE F +YE+ACK GEV G+M Sbjct 3 IESGKGNLLTAEVDALVNTVNTEGVMGKGLALQFKKAFPENFVSYERACKAGEVVPGRMH 62 Query 62 VVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGNG 121 +V +L P+ IINFPTKKHWR PSKL Y+ GL DL+ +R+L I S+A+PPLG GNG Sbjct 63 IVH--RLASPRFIINFPTKKHWRNPSKLEYVRDGLRDLVTHVRKLGIQSIAIPPLGCGNG 120 Query 122 GLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRA---IEGVEGLRMTWGRAVILEAMRRY 178 GLDW DV+ +V +F+ L DV V++ P+ A I+ E MT R IL M RY Sbjct 121 GLDWADVKPLIVQSFEALHDVRVVLFEPADAPSADKIIDRRETPVMTPARGAILALMGRY 180 Query 179 LQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEG 238 ++ +S +E+QKL YF +A L L++ YGPY++ +R L+ +EG Sbjct 181 IETGYNYR-------LSLVEVQKLAYFLQDAGEPLRLEYRAHHYGPYADNLRKALRNIEG 233 Query 239 AFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPY 298 +T G+GDG P+ L + ++L T A ++ V+++I+GFE P+ Sbjct 234 HYTRGMGDGKNS--PETPLELLPNTVTSAREFLKTRP---ETLARLERVVQLIDGFETPF 288 Query 299 GVELLASTHWVATRE-GAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 G+ELL + HWV E + + A V W++RK D I A R+ Sbjct 289 GMELLGTVHWVMRHEANSGDVEGVIAKVHAWSERKRSQMKDGHIRAAWTRL 339 >gi|85372713|gb|ABC70162.1| Appr-1-p processing enzyme family protein [Laribacter hongkongensis] Length=358 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 149/346 (44%), Positives = 203/346 (59%), Gaps = 18/346 (5%) Query 2 ITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKMF 61 I +G+LL A E LVNTVN GVMGKGIALQFK+ +P M+ YE+ACK GE+ +GK+ Sbjct 4 INIVNGNLLNAPVEVLVNTVNIEGVMGKGIALQFKQAFPAMYKEYERACKLGEMKLGKVH 63 Query 62 VVDTGQL-DGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 V D G L GP+ I+NFPTK HWR+ SKL+ + AGL DL+ ++ L I S+A+PPLG G Sbjct 64 VYDLGGLVGGPRWIVNFPTKGHWRSKSKLSDVKAGLDDLVSEVQRLGIRSIALPPLGCGL 123 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIE---GVEGLRMTWGRAVILEAMRR 177 GGL WEDV + AF VD +Y P+G A E E +MT GRA ++ M+R Sbjct 124 GGLKWEDVRPLIEQAFSTCEGVDVQLYAPTGAPSAAEMPNRTECPKMTVGRAALILMMKR 183 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y+ ++P+ +S LEI KLMYF EA L L + P +YGP++ +R +L +E Sbjct 184 YVDA--LLDPF-----VSLLEIHKLMYFLQEAGQPLRLKYEPMKYGPFASNLRQVLIKIE 236 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G + G GDG ++P+ +++ D R +D V ++I GFE P Sbjct 237 GHYLTGYGDGFD--YPDKPMETINDADQLAQEFVQHDLELQR---RMDRVSQLINGFEDP 291 Query 298 YGVELLASTHWVATREG-AKEPATAA-AAVRKWTKRKGRIYSDDRI 341 YG+ELL++ HWV E A E A AA AAV W RK + D+ + Sbjct 292 YGLELLSTVHWVMHHEAEAMESADAAIAAVHCWNSRKKAVLKDEHL 337 >gi|292493385|ref|YP_003528824.1| Appr-1-p processing domain protein [Nitrosococcus halophilus Nc4] gi|291581980|gb|ADE16437.1| Appr-1-p processing domain protein [Nitrosococcus halophilus Nc4] Length=353 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 154/369 (42%), Positives = 210/369 (57%), Gaps = 40/369 (10%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y G+LL+AD EALVNTVN VG+MGKGIAL FK + + F AY ACK GEV IG+M Sbjct 1 MIEYTKGNLLKADVEALVNTVNTVGIMGKGIALMFKEAFKDNFDAYAAACKAGEVKIGQM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F +TG L GP+ IINFPTKKHWR +KLA+I+ GL DL R I + I S+A+PPLG GN Sbjct 61 FTTETGNLMGPQWIINFPTKKHWRNKTKLAWIEEGLEDLRRTIIKYGIDSIAIPPLGCGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLR-MTWGRAVILEAMRRYL 179 GGLDW +V + L + ++Y P+ + + +G++ +T RA+I E +RRY Sbjct 121 GGLDWREVRPLIEKCLVDLNGIHILVYEPTQKYQNVAKRKGVQTLTPARALIAELVRRY- 179 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANE------ADPDLALDFTPGRYGPYSERVRHLL 233 W S LEIQKL +F D L LDF RYGPY++R+RHLL Sbjct 180 --------WVLGIECSLLEIQKLAWFLERRLEESGLDNPLQLDFKANRYGPYADRLRHLL 231 Query 234 QGMEGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLAT--DAAADRVSAAVDTVLRVI 291 ++G++ + LA+ T D +Y+AT + A A++ ++I Sbjct 232 DALDGSYL-----RCDKRLADAKPEDTIAFNDTQKEYVATYLKSKAKAYLPALEATTKLI 286 Query 292 EGFEGPYGVELLASTHWVATREGAKE------------PATAAAAVRKWTKRKGRIYSDD 339 +GFE P G+ELLA+ W+ RE K PA+ +AA+ RK RI+ D Sbjct 287 DGFESPLGMELLATVDWLLVREHCKPEVEDVKRGIAHWPASRSAAL-----RKQRIFDDR 341 Query 340 RIGVALDRI 348 I +AL+R+ Sbjct 342 LISLALERL 350 >gi|298529481|ref|ZP_07016884.1| Appr-1-p processing domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510917|gb|EFI34820.1| Appr-1-p processing domain protein [Desulfonatronospira thiodismutans ASO3-1] Length=344 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 146/352 (42%), Positives = 211/352 (60%), Gaps = 20/352 (5%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G++L A TEALVNTVNCVGVMGKGIALQFK+ +PE F Y AC+RGEV G+M Sbjct 1 MIEHVQGNILNAQTEALVNTVNCVGVMGKGIALQFKKAFPENFKTYRNACQRGEVKPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV DTGQ + P++IINFPTK+HWR S+ I+AGL L++ I NI+S+AVPPLG G Sbjct 61 FVFDTGQ-ELPRYIINFPTKRHWRDKSRYEDIEAGLQALVKEITARNISSIAVPPLGSGL 119 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIE---GVEGLRMTWGRAVILEAMRR 177 GGLDW ++ + AF LP+V ++ P G +A E G + +T RA+ ++ M++ Sbjct 120 GGLDWAKIKPMIERAFSDLPNVQIQLFKPEGSPQASEMPVGSDRPHLTTARALFIKLMQQ 179 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 Y +R A ++ LEIQKL Y E+ +L L + YGPY+ + +L+ +E Sbjct 180 Y--KRFAYR-------LTLLEIQKLAYLLQESGLNLRLSYVRHYYGPYAHNLNKVLEILE 230 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G + G GD + I L DA L+ A + ++ V +++GFE P Sbjct 231 GHYISGYGDTQK---PDVEIKLLPDAIDAADVLLSKHLEAYK---HLNRVADLVDGFETP 284 Query 298 YGVELLASTHWVATREG-AKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 YG+E+L+S HW+A E A + +A +A+ W +RK ++ + I +A DR+ Sbjct 285 YGMEMLSSVHWLAVHERLAVDQQSAISAMAGWNERKKCLFKPEHICIAWDRL 336 >gi|209527877|ref|ZP_03276366.1| Appr-1-p processing domain protein [Arthrospira maxima CS-328] gi|209491680|gb|EDZ92046.1| Appr-1-p processing domain protein [Arthrospira maxima CS-328] Length=351 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 146/354 (42%), Positives = 212/354 (60%), Gaps = 24/354 (6%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+LL +ALVNTVNCVGVMGKGIALQFK+ +PE F AY+ AC + G+M Sbjct 1 MIHFKQGNLLTEKADALVNTVNCVGVMGKGIALQFKQAFPENFRAYKTACDAKRIHPGQM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FVV T +L PK+IINFPTK+HW+ SK+ I AGLI L+ ++ L I S+A+PPLG GN Sbjct 61 FVVATDKL-FPKYIINFPTKRHWKGKSKIEDIKAGLIALVEEVKRLEITSIAIPPLGCGN 119 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIE---GVEGLRMTWGRAVILEAMRR 177 GGLDW V+ +V +F ++PD++ +I+ P+G A + +MT GRA+++ Sbjct 120 GGLDWAAVKPLIVQSFAEVPDIEVMIFEPTGAPVADQIPVATSTPKMTIGRALLI----- 174 Query 178 YLQQRRAMEPWEDPA-GISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 R +E + P ++ LEIQKL YF A L L + ++GPY++ + H+LQ + Sbjct 175 -----RLLELYGIPGYRLTKLEIQKLAYFLQVAGEPLRLRYVKHQFGPYADNLNHVLQKI 229 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEG 296 EG + G GD T + + KG DA +L +A A V +IEGFE Sbjct 230 EGHYIRGYGDRT----ETSAMYVLEKGRDAADRFL---SAHPDTGARRQRVSDLIEGFET 282 Query 297 PYGVELLASTHWVATR--EGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 PYG+E+LA+ HWVAT + A + A V++W+ RK ++ + + +A +R+ Sbjct 283 PYGLEMLATLHWVATEDPQAAIDCDRAIEKVQEWSDRKRHLFKPNHLRIAWERL 336 >gi|284119731|ref|ZP_06386789.1| protein containing Appr-1-p processing domain [Candidatus Poribacteria sp. WGA-A3] gi|283829435|gb|EFC33813.1| protein containing Appr-1-p processing domain [Candidatus Poribacteria sp. WGA-A3] Length=349 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 141/349 (41%), Positives = 205/349 (59%), Gaps = 16/349 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y +GD+L + EALVN+VNCVGVMG+GIALQFK+ +P + AY CKR E+ G + Sbjct 1 MIEYKTGDILAEEAEALVNSVNCVGVMGRGIALQFKKAFPGNYNAYVARCKRNEMQPGHV 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TG P++IINFPTK+HWR S++ I++GL+ L + +R I S+A+PPLG G Sbjct 61 FVFETGGTVFPRYIINFPTKRHWRGKSRIEDIESGLVSLAKAVRSHGIRSIAIPPLGSGL 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGG---SRAIEGVEGLRMTWGRAVILEAMRR 177 GGL W +V RL +A ++ DV +I+ P GG RA MT RA ++ M R Sbjct 121 GGLHWPEVRARLETALKEYEDVKVMIFEPGGGPIDERANSSSTVPNMTPARAALIGLMDR 180 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL R ++P+ ++ LE+ KLMYF EA L L + YGPY+E +RHLL +E Sbjct 181 YL--RGLLDPF-----VTLLEVHKLMYFMQEAGERLRLKYQEAPYGPYAENLRHLLHTIE 233 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G F G DG ++ + L + +LA+ + + V+++IEGFE Sbjct 234 GHFISGYADGGD--APDKQLELVPGAVEEAHTFLASHPETHK---RFNKVVKLIEGFESS 288 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALD 346 +G+ELL++ HW+A++E AK W RK + +S +I +A+D Sbjct 289 FGLELLSTVHWLASKEQAKTLDDVVQRTYAWNDRK-KQFSRRQIALAVD 336 >gi|209527889|ref|ZP_03276378.1| Appr-1-p processing domain protein [Arthrospira maxima CS-328] gi|209491692|gb|EDZ92058.1| Appr-1-p processing domain protein [Arthrospira maxima CS-328] Length=351 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 148/358 (42%), Positives = 214/358 (60%), Gaps = 32/358 (8%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+LL +ALVNTVNCVGVMGKGIALQFK+ +PE F AY+ AC + G+M Sbjct 1 MIHFKQGNLLTEKADALVNTVNCVGVMGKGIALQFKQAFPENFRAYKTACDAKRIHPGQM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FVV T +L PK+IINFPTK+HW+ SK+ I AGLI L+ ++ L I S+A+PPLG GN Sbjct 61 FVVATDKL-FPKYIINFPTKRHWKGKSKIEDIKAGLIALVEEVKRLEITSIAIPPLGCGN 119 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIE---GVEGLRMTWGRAVILEAMRR 177 GGLDW V+ +V +F ++PD++ +I+ P+G A + +MT GRA+++ Sbjct 120 GGLDWAAVKPLIVQSFAEVPDIEVMIFEPTGAPVADQIPVATSTPKMTIGRALLI----- 174 Query 178 YLQQRRAMEPWEDPA-GISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGM 236 R +E + P ++ LEIQKL YF A L L + ++GPY++ + H+LQ + Sbjct 175 -----RLLELYGIPGYRLTKLEIQKLAYFLQVAGEPLRLRYVKHQFGPYADNLNHVLQKI 229 Query 237 EGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLA----TDAAADRVSAAVDTVLRVIE 292 EG + G GD T + + KG DA +L+ T A RVS +IE Sbjct 230 EGHYIRGYGDRT----ETSAMYVLEKGRDAADRFLSAHPDTGARRQRVSD-------LIE 278 Query 293 GFEGPYGVELLASTHWVATR--EGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRI 348 GFE PYG+E+LA+ HWVAT + A + A V++W+ RK ++ + + +A +R+ Sbjct 279 GFETPYGLEMLATLHWVATEDPQAAIDCDRAIEKVQEWSDRKRHLFKPNHLRIAWERL 336 >gi|238921298|ref|YP_002934813.1| hypothetical protein NT01EI_3441 [Edwardsiella ictaluri 93-146] gi|238870867|gb|ACR70578.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length=355 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 148/366 (41%), Positives = 211/366 (58%), Gaps = 32/366 (8%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MITY G+LL A EALVNTVN VGVMGKGIAL FK R+P+ AY ACK+ +V GKM Sbjct 1 MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPDNMKAYADACKQKQVMTGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ +TG+L GP+ I+NFPTK+HWRA S++A+I+ GL DL R + E N+ S+A+PPLG GN Sbjct 61 FITETGELMGPRWIVNFPTKQHWRADSRMAWIEDGLQDLRRFLIEENVQSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL+W DV R+ SA L D + +IY P+ + + G+ ++T RA+I E +RRY Sbjct 121 GGLNWPDVRARIESALGDLQDTEILIYEPTEKYQNVAKSSGVKKLTPARAMIAELVRRY- 179 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANEA------DPDLALDFTPGRYGPYSERVRHLL 233 W S LEIQKL + A + L L F YGPY+ + HLL Sbjct 180 --------WVLGMECSLLEIQKLAWLLQRAIEQHQQEDVLKLRFEAHYYGPYAPNLNHLL 231 Query 234 QGMEGAFTVGLGDGTARVLANQP---ISLTTKGTDAITDYLATDAAADRVSAAVDTVLRV 290 ++G + R+ +QP I + + I +L ++A A A++ V ++ Sbjct 232 NALDGTYL----KAEKRIPDSQPLDVIWFNDREKEHINLWLNSEAKA--WLPALEQVSQL 285 Query 291 IEGFEGPYGVELLASTHWVATR-------EGAKEPATAAAAVRKWTKRKGRIYSDDRIGV 343 I+GFE P+G+ELLA+ W+ TR + KE A W RK +++ D + Sbjct 286 IDGFESPFGLELLATVDWLLTRGQCQPTLDSVKEGLHQWPAGEPWASRKIKLFDDKNLQF 345 Query 344 ALDRIL 349 A++R++ Sbjct 346 AINRVM 351 >gi|256023436|ref|ZP_05437301.1| hypothetical protein E4_08683 [Escherichia sp. 4_1_40B] gi|315618352|gb|EFU98940.1| macro domain protein [Escherichia coli 3431] Length=355 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 147/366 (41%), Positives = 209/366 (58%), Gaps = 32/366 (8%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MITY G+LL A EALVNTVN VGVMGKGIAL FK R+PE Y ACK+ +V GKM Sbjct 1 MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPENMKVYALACKQKQVITGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ +TG+L GP+ I+NFPTK+HWRA S++ +I+ GL DL R + E N+ S+A+PPLG GN Sbjct 61 FITETGELMGPRWIVNFPTKQHWRADSRMEWIEDGLQDLRRFLIEENVQSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL+W DV ++ SA L DVD +IY P+ + + G+ ++T RA I E +RRY Sbjct 121 GGLNWPDVRAQIESALGDLQDVDILIYQPTEKYQNVAKSTGVKKLTPARAAIAELVRRY- 179 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANEA------DPDLALDFTPGRYGPYSERVRHLL 233 W S LEIQKL + A D L L F YGPY+ + HLL Sbjct 180 --------WVLGMECSLLEIQKLAWLLQRAIEQHQQDDILKLRFEAHYYGPYAPNLNHLL 231 Query 234 QGMEGAFTVGLGDGTARVLANQP---ISLTTKGTDAITDYLATDAAADRVSAAVDTVLRV 290 ++G + R+ +QP I + + + YL +A A++ V ++ Sbjct 232 NALDGTYL----KAEKRIPDSQPLDAIWFNDQKKEHVNAYLNNEAR--EWLPALEQVSQL 285 Query 291 IEGFEGPYGVELLASTHWVATR-------EGAKEPATAAAAVRKWTKRKGRIYSDDRIGV 343 I+GFE P+G+ELLA+ W+ +R + KE A +W RK R++ ++ + Sbjct 286 IDGFESPFGLELLATVDWLLSRGECQPTLDSVKEGLHQWPAGERWASRKLRLFDNNNLQF 345 Query 344 ALDRIL 349 A++R++ Sbjct 346 AINRVM 351 >gi|148654474|ref|YP_001274679.1| appr-1-p processing domain-containing protein [Roseiflexus sp. RS-1] gi|148566584|gb|ABQ88729.1| Appr-1-p processing domain protein [Roseiflexus sp. RS-1] Length=354 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 150/347 (44%), Positives = 206/347 (60%), Gaps = 17/347 (4%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI Y +G++L A+ EALVN+VNCVGVMG+G+ALQFK+ +PE F AY AC+R EV G+M Sbjct 1 MIEYVTGNILEAEVEALVNSVNCVGVMGRGVALQFKKDWPENFKAYAAACRRQEVQPGRM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TG L P++IINFPTK+HWR +++ I+AGL L+ I+ I SVA+PPLG G Sbjct 61 FVFETGNLF-PRYIINFPTKRHWRGKARIEDIEAGLSALVEEIQRRGIRSVALPPLGCGL 119 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGS---RAIEGVEGLRMTWGRAVILEAMRR 177 GGL+W +V R+ L DV +++ P+ R++ MT GRA ++ M R Sbjct 120 GGLEWSEVRARIEETLAGLVDVRILVFEPTEVQPLPRSMRRGPVPSMTPGRAAMVVLMER 179 Query 178 YLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGME 237 YL ++P+ IS LE+ KLMYF EA L L FT G YGP +E +RH+L +E Sbjct 180 YLVG--LLDPF-----ISLLEVHKLMYFLQEAGEPLRLRFTKGPYGPCAENLRHVLSAVE 232 Query 238 GAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGP 297 G + G G+G +QP + AI D + + V R++EGFE P Sbjct 233 GYYISGFGNG-----GDQPDKVLELVPGAIDDARRVLDQQPEMRERFERVGRLVEGFESP 287 Query 298 YGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVA 344 +G+ELLA+ HWVATRE V W +RK R +S D+I +A Sbjct 288 FGLELLATVHWVATRERPATEEELIEHVYAWAERK-RQFSRDQILLA 333 >gi|183597178|ref|ZP_02958671.1| hypothetical protein PROSTU_00421 [Providencia stuartii ATCC 25827] gi|188023492|gb|EDU61532.1| hypothetical protein PROSTU_00421 [Providencia stuartii ATCC 25827] Length=357 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 146/365 (40%), Positives = 210/365 (58%), Gaps = 32/365 (8%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+LL AD EALVNTVN VGVMGKGIAL FK R+P AY KACK EV GKM Sbjct 1 MIEFTQGNLLEADVEALVNTVNTVGVMGKGIALMFKERFPANMAAYAKACKTHEVQTGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +TG+L GP+ I+NFPTK+HWRA S++ +I GL DL I E ++ S+A+PPLG GN Sbjct 61 FVTETGELMGPRWIVNFPTKQHWRAKSQIQWIIDGLFDLRNFIEENHVKSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL+W+DV+ +V L +V ++Y P + + +G+ ++T RA+I E +RRY Sbjct 121 GGLNWDDVKPHIVEILGDLQNVKIIVYEPIAKYQNVAKPKGVEKLTPARALIAELIRRY- 179 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYF------ANEADPDLALDFTPGRYGPYSERVRHLL 233 W S LEIQKL +F A L L F YGPY++++RHLL Sbjct 180 --------WVMGMDCSLLEIQKLAWFLERTIEAEGLKNPLNLKFEAKNYGPYADKLRHLL 231 Query 234 QGMEGAFTVGLGDGTARVLANQPISLTTKGTD---AITDYLATDAAADRVSAAVDTVLRV 290 G++G++ R+ P+ + D I YL T+ A D +S A++ ++ Sbjct 232 NGLDGSYL----KSEKRISDCSPLDVIWFNDDKRATIELYLKTE-AKDYLS-ALEKTTKL 285 Query 291 IEGFEGPYGVELLASTHWVATR-------EGAKEPATAAAAVRKWTKRKGRIYSDDRIGV 343 I+GFE P+G+ELL++ W+ + E E A +W +RK R++ ++ + Sbjct 286 IDGFESPFGIELLSTVDWLLYKKQSSPSIESLLEGIRQWPAGDRWAQRKLRLFDSSKLEL 345 Query 344 ALDRI 348 AL+ + Sbjct 346 ALNHL 350 >gi|338708706|ref|YP_004673789.1| Appr-1-p processing domain-containing protein [Zymomonas mobilis subsp. pomaceae ATCC 29192] gi|336295510|gb|AEI38616.1| Appr-1-p processing domain protein [Zymomonas mobilis subsp. pomaceae ATCC 29192] Length=359 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 152/367 (42%), Positives = 213/367 (59%), Gaps = 36/367 (9%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MI + G+LL A EALVNTVN VGVMGKGIAL FK R+ E F Y ACK EV IGKM Sbjct 1 MIIFTQGNLLEATVEALVNTVNTVGVMGKGIALMFKERFHENFRLYSAACKAKEVQIGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 FV +L + I+NFPTK+HWR PS++ +I GL DL R++ E NI S+A+PPLG GN Sbjct 61 FVTPVYELGETRWIVNFPTKQHWRNPSQIEWIIKGLQDLRRILIEKNIKSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL W++V +++ A + L D+D ++ P+ + + G+ ++T RA+I E +RRY Sbjct 121 GGLPWKEVREQIELALRDL-DIDIFVFEPTIQYQNVAKRTGVEKLTPARALIAELVRRY- 178 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANEA----DPD---LALDFTPGRYGPYSERVRHL 232 W S LEIQKL +F A PD L LDF P +YGPY+ ++ +L Sbjct 179 --------WVMGIECSLLEIQKLAWFLQRAIEQHSPDNNPLNLDFQPHKYGPYTHQLNYL 230 Query 233 LQGMEGAFTVGLGDGTARVLANQP---ISLTTKGTDAITDYLATDAAADRVSAAVDTVLR 289 L ++G++ R+ + P I K D + YL ++A R A+++ Sbjct 231 LNSLDGSYL----HSDKRISDSDPLDVILFVDKRKDDLQAYLKSEAKPYR--QALESAAM 284 Query 290 VIEGFEGPYGVELLASTHWVATREGAKEPATAA--AAVRKW------TKRKGRIYSDDRI 341 +I+GFE P+G+ELLA+ W+ TRE EP A +R W RK RI++D + Sbjct 285 LIDGFESPFGMELLATVDWLLTRENI-EPNVPALRKGLRSWRGGADAALRKDRIFNDRSL 343 Query 342 GVALDRI 348 G+ALDR+ Sbjct 344 GIALDRL 350 >gi|269140416|ref|YP_003297117.1| hypothetical protein ETAE_3073 [Edwardsiella tarda EIB202] gi|267986077|gb|ACY85906.1| hypothetical protein ETAE_3073 [Edwardsiella tarda EIB202] Length=355 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 146/366 (40%), Positives = 209/366 (58%), Gaps = 32/366 (8%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MITY G+LL A EALVNTVN VGVMGKGIAL FK R+P+ AY ACK+ +V GKM Sbjct 1 MITYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPDNMKAYAHACKQKQVMTGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ +TG+L GP+ I+NFPTK+HWRA S++A+I+ GL DL R + E + S+A+PPLG GN Sbjct 61 FITETGELMGPRWIVNFPTKQHWRADSRMAWIEDGLQDLRRFLIEKKVRSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL+W DV R+ S L D + +IY P+ + + G+ ++T RA+I E +RRY Sbjct 121 GGLNWPDVRARIESTLGDLQDTEILIYEPTEKYQNVAKSSGVKKLTPARAMIAELVRRY- 179 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANEA------DPDLALDFTPGRYGPYSERVRHLL 233 W S LEIQKL + A + L L F YGPY+ + HLL Sbjct 180 --------WVLGMECSLLEIQKLAWLLQRAIEQHQQEDVLKLRFEAHYYGPYAPNLNHLL 231 Query 234 QGMEGAFTVGLGDGTARVLANQP---ISLTTKGTDAITDYLATDAAADRVSAAVDTVLRV 290 ++G + R+ +QP I + + I +L ++A A A++ V ++ Sbjct 232 NALDGTYL----KAEKRIPDSQPLDVIWFNDREKEHINLWLNSEAKA--WLPALEQVSQL 285 Query 291 IEGFEGPYGVELLASTHWVATR-------EGAKEPATAAAAVRKWTKRKGRIYSDDRIGV 343 I+GFE P+G+ELLA+ W+ TR + KE A W RK +++ D + Sbjct 286 IDGFESPFGLELLATVDWLLTRGQCQPTLDSVKEGLHQWPAGEPWASRKIKLFDDKNLQF 345 Query 344 ALDRIL 349 A++R++ Sbjct 346 AINRVM 351 >gi|253687259|ref|YP_003016449.1| Appr-1-p processing domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753837|gb|ACT11913.1| Appr-1-p processing domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length=355 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 146/366 (40%), Positives = 208/366 (57%), Gaps = 32/366 (8%) Query 1 MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKRGEVTIGKM 60 MIT+ G+LL A EALVNTVN VGVMGKGIAL FK R+P AY ACK+ +V GKM Sbjct 1 MITFTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPANMKAYALACKQKQVMTGKM 60 Query 61 FVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGN 120 F+ +TG+L GP+ I+NFPTK+HWRA S++A+I+ GL DL R + E + S+A+PPLG GN Sbjct 61 FITETGELMGPRWIVNFPTKQHWRADSRMAWIEDGLQDLRRFLIEKQVQSIAIPPLGAGN 120 Query 121 GGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGL-RMTWGRAVILEAMRRYL 179 GGL+W DV + SA L D++ +IY P+ + G+ ++T RA+I E +RRY Sbjct 121 GGLNWPDVRAHIESALGDLQDINILIYEPTEKYLNVAKSTGVKKLTPARAMIAELVRRY- 179 Query 180 QQRRAMEPWEDPAGISHLEIQKLMYFANEA------DPDLALDFTPGRYGPYSERVRHLL 233 W S LEIQKL + A D L L F YGPY+ + HLL Sbjct 180 --------WVLGIECSLLEIQKLAWLLQRAIELHRQDDVLKLRFDAHYYGPYAPNLSHLL 231 Query 234 QGMEGAFTVGLGDGTARVLANQP---ISLTTKGTDAITDYLATDAAADRVSAAVDTVLRV 290 ++G + R+ +QP I + D I YL ++ A A+ V ++ Sbjct 232 NALDGTYL----KAEKRIPDSQPLDVIWFNDREKDRIEAYL--NSEAKEWLPALKQVSQL 285 Query 291 IEGFEGPYGVELLASTHWVATR-------EGAKEPATAAAAVRKWTKRKGRIYSDDRIGV 343 I+GFE P+G+ELLA+ W+ R + KE + A +W RK +++ D+ + Sbjct 286 IDGFESPFGMELLATVDWLLARGECQPTLDSVKEGLSQWPAGERWASRKMKLFDDNNLQF 345 Query 344 ALDRIL 349 A++R++ Sbjct 346 AINRVM 351 Lambda K H 0.320 0.137 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 654597672016 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40