BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0080
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607222|ref|NP_214594.1| hypothetical protein Rv0080 [Mycoba... 296 7e-79
gi|31791258|ref|NP_853751.1| hypothetical protein Mb0083 [Mycoba... 292 9e-78
gi|121635993|ref|YP_976216.1| hypothetical protein BCG_0113 [Myc... 290 5e-77
gi|289572660|ref|ZP_06452887.1| conserved hypothetical protein [... 290 6e-77
gi|340625115|ref|YP_004743567.1| hypothetical protein MCAN_00811... 285 2e-75
gi|289756141|ref|ZP_06515519.1| conserved hypothetical protein [... 267 3e-70
gi|15839461|ref|NP_334498.1| hypothetical protein MT0087 [Mycoba... 265 1e-69
gi|307082546|ref|ZP_07491659.1| hypothetical protein TMLG_00817 ... 240 4e-62
gi|289445610|ref|ZP_06435354.1| conserved hypothetical protein [... 223 5e-57
gi|290955006|ref|YP_003486188.1| hypothetical protein SCAB_4121 ... 144 4e-33
gi|291435536|ref|ZP_06574926.1| conserved hypothetical protein [... 144 5e-33
gi|297197533|ref|ZP_06914930.1| conserved hypothetical protein [... 138 2e-31
gi|345002589|ref|YP_004805443.1| pyridoxamine 5'-phosphate oxida... 132 2e-29
gi|254381595|ref|ZP_04996959.1| conserved hypothetical protein [... 129 1e-28
gi|54024861|ref|YP_119103.1| hypothetical protein nfa28920 [Noca... 127 4e-28
gi|337763697|emb|CCB72407.1| conserved protein of unknown functi... 127 5e-28
gi|291454791|ref|ZP_06594181.1| conserved hypothetical protein [... 118 2e-25
gi|296271455|ref|YP_003654087.1| hypothetical protein Tbis_3506 ... 99.8 1e-19
gi|294633273|ref|ZP_06711832.1| conserved hypothetical protein [... 97.4 6e-19
gi|271965702|ref|YP_003339898.1| hypothetical protein Sros_4254 ... 97.1 7e-19
gi|291441655|ref|ZP_06581045.1| conserved hypothetical protein [... 94.4 5e-18
gi|269124764|ref|YP_003298134.1| pyridoxamine 5'-phosphate oxida... 93.6 9e-18
gi|72163350|ref|YP_291007.1| hypothetical protein Tfu_2951 [Ther... 91.7 3e-17
gi|329941711|ref|ZP_08290976.1| hypothetical protein SGM_6468 [S... 89.7 1e-16
gi|302556716|ref|ZP_07309058.1| helix-turn-helix domain-containi... 89.7 1e-16
gi|294633269|ref|ZP_06711828.1| conserved hypothetical protein [... 89.4 2e-16
gi|331696126|ref|YP_004332365.1| hypothetical protein Psed_2299 ... 88.2 3e-16
gi|269126196|ref|YP_003299566.1| hypothetical protein Tcur_1961 ... 85.1 3e-15
gi|21218768|ref|NP_624547.1| hypothetical protein SCO0214 [Strep... 84.3 5e-15
gi|118469347|ref|YP_889382.1| hypothetical protein MSMEG_5136 [M... 84.3 5e-15
gi|271965559|ref|YP_003339755.1| hypothetical protein Sros_4105 ... 83.6 9e-15
gi|108800588|ref|YP_640785.1| pyridoxamine 5'-phosphate oxidase-... 83.6 9e-15
gi|289774132|ref|ZP_06533510.1| conserved hypothetical protein [... 83.2 1e-14
gi|302562253|ref|ZP_07314595.1| helix-turn-helix domain-containi... 83.2 1e-14
gi|269124763|ref|YP_003298133.1| pyridoxamine 5'-phosphate oxida... 82.4 2e-14
gi|21218753|ref|NP_624532.1| hypothetical protein SCO0197 [Strep... 82.0 2e-14
gi|311899769|dbj|BAJ32177.1| hypothetical protein KSE_64180 [Kit... 80.9 5e-14
gi|271966178|ref|YP_003340374.1| hypothetical protein Sros_4808 ... 75.9 2e-12
gi|29827812|ref|NP_822446.1| DNA-binding protein [Streptomyces a... 75.1 3e-12
gi|46205746|ref|ZP_00048143.2| hypothetical protein Magn03001018... 73.9 7e-12
gi|297561213|ref|YP_003680187.1| hypothetical protein Ndas_2259 ... 73.2 1e-11
gi|271967432|ref|YP_003341628.1| hypothetical protein Sros_6155 ... 72.8 2e-11
gi|220912640|ref|YP_002487949.1| pyridoxamine 5'-phosphate oxida... 72.8 2e-11
gi|271965960|ref|YP_003340156.1| hypothetical protein Sros_4549 ... 68.9 2e-10
gi|72163432|ref|YP_291089.1| helix-hairpin-helix DNA-binding mot... 68.9 3e-10
gi|336117822|ref|YP_004572590.1| hypothetical protein MLP_21730 ... 68.2 4e-10
gi|325963244|ref|YP_004241150.1| flavin-nucleotide-binding prote... 68.2 4e-10
gi|254381383|ref|ZP_04996748.1| hypothetical protein SSAG_01050 ... 67.8 5e-10
gi|257055020|ref|YP_003132852.1| Pyridoxamine 5'-phosphate oxida... 67.8 6e-10
gi|54027872|ref|YP_122112.1| hypothetical protein pnf2620 [Nocar... 66.6 1e-09
>gi|15607222|ref|NP_214594.1| hypothetical protein Rv0080 [Mycobacterium tuberculosis H37Rv]
gi|148659842|ref|YP_001281365.1| hypothetical protein MRA_0084 [Mycobacterium tuberculosis H37Ra]
gi|148821272|ref|YP_001286026.1| hypothetical protein TBFG_10081 [Mycobacterium tuberculosis F11]
54 more sequence titles
Length=152
Score = 296 bits (758), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/152 (100%), Positives = 152/152 (100%), Gaps = 0/152 (0%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG
Sbjct 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL
Sbjct 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
Query 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Sbjct 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
>gi|31791258|ref|NP_853751.1| hypothetical protein Mb0083 [Mycobacterium bovis AF2122/97]
gi|224988466|ref|YP_002643153.1| hypothetical protein JTY_0084 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289441449|ref|ZP_06431193.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
8 more sequence titles
Length=152
Score = 292 bits (748), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 151/152 (99%), Gaps = 0/152 (0%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVI
Sbjct 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIV 60
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL
Sbjct 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
Query 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Sbjct 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
>gi|121635993|ref|YP_976216.1| hypothetical protein BCG_0113 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121491640|emb|CAL70098.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
Length=152
Score = 290 bits (742), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/152 (99%), Positives = 150/152 (99%), Gaps = 0/152 (0%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHG VVFTRAALPAIRPVNHLVVDGRVI
Sbjct 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGCVVFTRAALPAIRPVNHLVVDGRVIV 60
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL
Sbjct 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
Query 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Sbjct 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
>gi|289572660|ref|ZP_06452887.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339630164|ref|YP_004721806.1| hypothetical protein MAF_00810 [Mycobacterium africanum GM041182]
gi|289537091|gb|EFD41669.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339329520|emb|CCC25155.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=152
Score = 290 bits (741), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/152 (99%), Positives = 150/152 (99%), Gaps = 0/152 (0%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
MSPGSRRASPQSAREVVELDRDEAMRLLAS DHGRVVFTRAALPAIRPVNHLVVDGRVI
Sbjct 1 MSPGSRRASPQSAREVVELDRDEAMRLLASGDHGRVVFTRAALPAIRPVNHLVVDGRVIV 60
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL
Sbjct 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
Query 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Sbjct 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
>gi|340625115|ref|YP_004743567.1| hypothetical protein MCAN_00811 [Mycobacterium canettii CIPT
140010059]
gi|340003305|emb|CCC42422.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=152
Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/152 (96%), Positives = 150/152 (99%), Gaps = 0/152 (0%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVI
Sbjct 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIV 60
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLA +V+DP+QVARY+RL
Sbjct 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLAIKVTDPQQVARYERL 120
Query 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
LHPWVNMAMDTV+AIEPEIVTGIRIVADSRTP
Sbjct 121 LHPWVNMAMDTVIAIEPEIVTGIRIVADSRTP 152
>gi|289756141|ref|ZP_06515519.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289696728|gb|EFD64157.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=157
Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/151 (93%), Positives = 140/151 (93%), Gaps = 0/151 (0%)
Query 2 SPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGR 61
PG P REVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVI R
Sbjct 7 EPGLAARQPAKRREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIVR 66
Query 62 TRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLL 121
TRLTA VSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLL
Sbjct 67 TRLTANVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLL 126
Query 122 HPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
HPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Sbjct 127 HPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 157
>gi|15839461|ref|NP_334498.1| hypothetical protein MT0087 [Mycobacterium tuberculosis CDC1551]
gi|13879135|gb|AAK44312.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=137
Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/137 (99%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 16 VVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSS 75
+VELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSS
Sbjct 1 MVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSS 60
Query 76 ADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAI 135
ADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAI
Sbjct 61 ADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAI 120
Query 136 EPEIVTGIRIVADSRTP 152
EPEIVTGIRIVADSRTP
Sbjct 121 EPEIVTGIRIVADSRTP 137
>gi|307082546|ref|ZP_07491659.1| hypothetical protein TMLG_00817 [Mycobacterium tuberculosis SUMu012]
gi|308367715|gb|EFP56566.1| hypothetical protein TMLG_00817 [Mycobacterium tuberculosis SUMu012]
Length=123
Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)
Query 30 SVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVVVAYEADDL 89
SVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVVVAYEADDL
Sbjct 1 SVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVVVAYEADDL 60
Query 90 DPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADS 149
DPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADS
Sbjct 61 DPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADS 120
Query 150 RTP 152
RTP
Sbjct 121 RTP 123
>gi|289445610|ref|ZP_06435354.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289418568|gb|EFD15769.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=117
Score = 223 bits (569), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/117 (99%), Positives = 116/117 (99%), Gaps = 0/117 (0%)
Query 36 VVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRT 95
+VFTRAALPAIRPVNHLVVDGRVI RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRT
Sbjct 1 MVFTRAALPAIRPVNHLVVDGRVIVRTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRT 60
Query 96 GWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
GWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Sbjct 61 GWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP 117
>gi|290955006|ref|YP_003486188.1| hypothetical protein SCAB_4121 [Streptomyces scabiei 87.22]
gi|260644532|emb|CBG67617.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=152
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/150 (51%), Positives = 100/150 (67%), Gaps = 0/150 (0%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
M P S AR V+LD DEA+RLL +V GR+VFTR ALP +RPVNH++ G ++
Sbjct 1 MMPISNHQGAAVARRSVDLDSDEALRLLGTVSFGRIVFTRHALPTVRPVNHVLDRGEIVI 60
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RT A ++ + + D GVVVAYEAD +DP GWSVVVTG A V+DPE++ARY+ +
Sbjct 61 RTLEGAALTARAQEADDRGVVVAYEADVIDPDTHLGWSVVVTGYARPVTDPEELARYRAM 120
Query 121 LHPWVNMAMDTVVAIEPEIVTGIRIVADSR 150
L PWV+ MD V I P++VTGIR++ R
Sbjct 121 LRPWVSGTMDHAVRIRPDLVTGIRLMTVDR 150
>gi|291435536|ref|ZP_06574926.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291338431|gb|EFE65387.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=154
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/138 (55%), Positives = 93/138 (68%), Gaps = 0/138 (0%)
Query 10 PQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVS 69
P + R VELD DEA+RLL SV GR+VFTR ALP IRPVNH++ G V+ RT ++
Sbjct 10 PAAPRRSVELDTDEALRLLGSVSFGRIVFTRHALPTIRPVNHVLDRGDVVIRTHEGMALT 69
Query 70 VAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAM 129
+ + D GVVVAYEAD +DP GWSVVVTG A V+DP ++A Y LL PWV+ M
Sbjct 70 ARAQEADDHGVVVAYEADAIDPLTHLGWSVVVTGYAHLVTDPRELAHYHSLLRPWVDRTM 129
Query 130 DTVVAIEPEIVTGIRIVA 147
D V I P++VTGIR+ A
Sbjct 130 DYAVRIRPDLVTGIRLTA 147
>gi|297197533|ref|ZP_06914930.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715597|gb|EDY59631.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=155
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/146 (49%), Positives = 95/146 (66%), Gaps = 0/146 (0%)
Query 5 SRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRL 64
+ R + R VELD EA+RLL SV GR+VFT+ ALP +RPVNH++ G ++ RT
Sbjct 6 NHRPTTVEPRRRVELDSVEALRLLGSVSLGRIVFTQHALPTVRPVNHVLDGGDIVIRTHE 65
Query 65 TAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPW 124
A ++ R + GVVVAYEADD+ P GWSVVVTG A V+DP ++ARYQ ++ PW
Sbjct 66 AAALTSHARQTDGPGVVVAYEADDIAPDTHLGWSVVVTGYARLVTDPAELARYQGMMRPW 125
Query 125 VNMAMDTVVAIEPEIVTGIRIVADSR 150
AMD + I P++VTG+ + AD R
Sbjct 126 TEGAMDQAIRIHPDLVTGVLLTADGR 151
>gi|345002589|ref|YP_004805443.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Streptomyces
sp. SirexAA-E]
gi|344318215|gb|AEN12903.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Streptomyces sp. SirexAA-E]
Length=169
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/134 (50%), Positives = 86/134 (65%), Gaps = 0/134 (0%)
Query 14 REVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVR 73
R VEL +AM LL GR+VFTR ALPA+RPVNHL+ G+++ RT + + R
Sbjct 36 RHTVELTAVQAMALLGGAPLGRIVFTRRALPAVRPVNHLLDGGQIVIRTHRDSDLFHQAR 95
Query 74 SSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVV 133
GVVVAY+ADD+DP GWSVV TG V+DPE + RYQRL+ PW + M+ V
Sbjct 96 QHGGLGVVVAYQADDIDPLTHLGWSVVATGYCRPVTDPEALLRYQRLIRPWPDRPMEAAV 155
Query 134 AIEPEIVTGIRIVA 147
I P++VTG+R+ A
Sbjct 156 RISPDLVTGVRLTA 169
>gi|254381595|ref|ZP_04996959.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340504|gb|EDX21470.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=164
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (49%), Positives = 92/150 (62%), Gaps = 0/150 (0%)
Query 3 PGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRT 62
P R +AR + +LDR EA+RLL++V GR+VFTR ALPA+RPVNHLVV VI R
Sbjct 9 PAGRFGGMTAARHMRDLDRSEALRLLSTVSLGRIVFTRHALPAVRPVNHLVVGEDVIVRI 68
Query 63 RLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLH 122
+ V GVVVAYEAD +DP GWSVVVTG A V+D ++ RY LL
Sbjct 69 HEDGALGSLVAPGDVPGVVVAYEADVIDPVTHLGWSVVVTGYARVVADTDEADRYASLLR 128
Query 123 PWVNMAMDTVVAIEPEIVTGIRIVADSRTP 152
PWV M + + I P++VTG R+ A+ P
Sbjct 129 PWVARPMTSALRIHPDLVTGFRLEAEPTRP 158
>gi|54024861|ref|YP_119103.1| hypothetical protein nfa28920 [Nocardia farcinica IFM 10152]
gi|54016369|dbj|BAD57739.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=154
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/137 (54%), Positives = 92/137 (68%), Gaps = 2/137 (1%)
Query 12 SAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVA 71
AR ++E+ R EAM LLA + GR+VFTR ALPAIRPVNHLV ++ RT T ++ +
Sbjct 13 CARTMLEIGRGEAMALLARMPFGRIVFTRDALPAIRPVNHLVDGQSIVVRTGATTGLAAS 72
Query 72 VRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDT 131
VR A VVVAYEAD++DP R GWSVVVTG A V+DP+ +A Y L WV+ A D
Sbjct 73 VR--ARGSVVVAYEADEIDPVRGLGWSVVVTGCARPVTDPDLLAGYSARLRSWVDPAPDE 130
Query 132 VVAIEPEIVTGIRIVAD 148
VVAIE +V G+R+ A
Sbjct 131 VVAIEATLVHGVRLAAQ 147
>gi|337763697|emb|CCB72407.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=180
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/143 (54%), Positives = 88/143 (62%), Gaps = 9/143 (6%)
Query 3 PGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRT 62
PG P A + R EA+ LLASV GRVVF+ ALPAIRPVNHL+ VI RT
Sbjct 14 PGDAEPPPGPA-----MSRQEALDLLASVPVGRVVFSHRALPAIRPVNHLLDGDEVIIRT 68
Query 63 RLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLH 122
A A+ A G VVAYEAD LDP RRTGWSVVVTG+A V+DPE++ RY L
Sbjct 69 HCGA----ALLGPAGQGAVVAYEADALDPVRRTGWSVVVTGVAAPVTDPERLRRYHHTLR 124
Query 123 PWVNMAMDTVVAIEPEIVTGIRI 145
PWV AM + I ++VTG RI
Sbjct 125 PWVGGAMAHAIRISTDVVTGFRI 147
>gi|291454791|ref|ZP_06594181.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291357740|gb|EFE84642.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=150
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/150 (47%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query 1 MSPGSRRASP-QSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVI 59
M+ R P + R VEL R EA+ LL V GRVVFT+ ALPA+RPVNHL+ ++
Sbjct 1 MTSTDHRTPPTRQERHTVELGRTEALALLGQVSLGRVVFTQRALPAVRPVNHLLDGDDIV 60
Query 60 GRTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQR 119
RT ++ + R G VVAY+AD LDP GWSVVVTG V+DP +ARY R
Sbjct 61 VRTHDSSALLGQARPH---GAVVAYQADALDPVTHLGWSVVVTGYCRPVTDPADLARYAR 117
Query 120 LLHPWVNM---AMDTVVAIEPEIVTGIRIV 146
LL PW + MD+ V I P +V+G+R+V
Sbjct 118 LLRPWPRLPGQVMDSAVRITPHLVSGVRLV 147
>gi|296271455|ref|YP_003654087.1| hypothetical protein Tbis_3506 [Thermobispora bispora DSM 43833]
gi|296094242|gb|ADG90194.1| hypothetical protein Tbis_3506 [Thermobispora bispora DSM 43833]
Length=135
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/129 (42%), Positives = 81/129 (63%), Gaps = 6/129 (4%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADA 78
L R+E ++LLAS GR+VFT ALPA++PVN + +G ++ RT T+++++A R++
Sbjct 11 LTREECLKLLASTPIGRIVFTDRALPAVQPVNFCLHEGLIVIRTTATSRLAMAARNT--- 67
Query 79 GVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMAMDTVVAIEP 137
+VA+E D D RTGWSV G A V+DPE++ R +L L PW + + I P
Sbjct 68 --IVAFEGDHFDIETRTGWSVTAVGHARGVTDPEELERLSKLPLIPWAPGVREHYIVISP 125
Query 138 EIVTGIRIV 146
E V+G R+V
Sbjct 126 EQVSGRRLV 134
>gi|294633273|ref|ZP_06711832.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292831054|gb|EFF89404.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=141
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/137 (49%), Positives = 86/137 (63%), Gaps = 14/137 (10%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLV-VDGRVIGRTRLTAKVSVAVRSSAD 77
LDR E +RLLA V GRVV+TR ALPA+ PVN ++ D V+ RT + + AV
Sbjct 10 LDRPECLRLLAEVPVGRVVYTRQALPAVLPVNFVLGPDASVLLRTSAGSDLVRAVD---- 65
Query 78 AGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLH----PWVNMAMDTVV 133
GVVVA+EAD+ DP R+GWSVVVTG AT V+DP A ++RLL W+ + D +
Sbjct 66 -GVVVAFEADEFDPASRSGWSVVVTGQATVVTDP---AEHERLLRTGPDSWMPIRDDVFI 121
Query 134 AIEPEIVTGIRIVADSR 150
IE +VTG R +AD R
Sbjct 122 RIESTMVTG-RALADLR 137
>gi|271965702|ref|YP_003339898.1| hypothetical protein Sros_4254 [Streptosporangium roseum DSM
43021]
gi|270508877|gb|ACZ87155.1| hypothetical protein Sros_4254 [Streptosporangium roseum DSM
43021]
Length=136
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/126 (45%), Positives = 76/126 (61%), Gaps = 6/126 (4%)
Query 23 EAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVVV 82
E M LLA+ GR+VFT ALPA++PVN ++ ++ RT + +K++ A R + +V
Sbjct 15 ECMALLATAPIGRIVFTDRALPAVQPVNFVLDGTDIVIRTTVGSKLAAATRRT-----IV 69
Query 83 AYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMAMDTVVAIEPEIVT 141
A+EADD DP+ RTGWSV V G A V DP++ AR L L PW D + IE E V+
Sbjct 70 AFEADDFDPQGRTGWSVTVVGHARAVDDPQEAARLAGLPLMPWAPGERDHFIVIEAEQVS 129
Query 142 GIRIVA 147
G RI
Sbjct 130 GRRITG 135
>gi|291441655|ref|ZP_06581045.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291344550|gb|EFE71506.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=149
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/132 (49%), Positives = 80/132 (61%), Gaps = 7/132 (5%)
Query 18 ELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLV-VDGRVIGRTRLTAKVSVAVRSSA 76
EL R E +RL+ V GR+VFTR ALPA+ PVN + DG V+ RT A S VR A
Sbjct 9 ELGRQECLRLMTQVPVGRIVFTRRALPAVLPVNFCLDADGAVLLRT---ASASELVR--A 63
Query 77 DAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLH-PWVNMAMDTVVAI 135
G VVA+EAD +D R+ GWSVVVTG AT V+DP + R R+ WV + V +
Sbjct 64 IDGAVVAFEADHVDAVRQAGWSVVVTGPATVVTDPAEHERLTRVGPVSWVPAQREVFVRV 123
Query 136 EPEIVTGIRIVA 147
EPE+VTG +V
Sbjct 124 EPELVTGRELVG 135
>gi|269124764|ref|YP_003298134.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Thermomonospora
curvata DSM 43183]
gi|268309722|gb|ACY96096.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Thermomonospora curvata DSM 43183]
Length=142
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/135 (46%), Positives = 79/135 (59%), Gaps = 6/135 (4%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADA 78
LD DE LLA GR+VFT+ ALPAI+PVN V +G VI R K++ A R++
Sbjct 11 LDEDECRALLAKAPLGRIVFTQRALPAIQPVNFTVDNGDVIIRAAQGTKLAAAARNAI-- 68
Query 79 GVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMAMDTVVAIEP 137
VA+E DD D RTGWSVV+ G A VSDP++VAR Q L L PW + + I P
Sbjct 69 ---VAFEVDDFDEASRTGWSVVIVGPARVVSDPKEVARLQELPLRPWAPGRREHFIRIRP 125
Query 138 EIVTGIRIVADSRTP 152
+++G RI S P
Sbjct 126 TLISGRRIPEHSAPP 140
>gi|72163350|ref|YP_291007.1| hypothetical protein Tfu_2951 [Thermobifida fusca YX]
gi|71917082|gb|AAZ56984.1| conserved hypothetical protein [Thermobifida fusca YX]
Length=145
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/132 (42%), Positives = 77/132 (59%), Gaps = 6/132 (4%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADA 78
L R+E ++LLA GR+VFT ALPA++PVN ++ +I RT +K++ A+R +
Sbjct 19 LAREECLQLLAEAPIGRIVFTDHALPAVQPVNFAMLGTDIIIRTSPESKLAQAIRDT--- 75
Query 79 GVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMAMDTVVAIEP 137
VVA+E DD D RTGWSV V G+ V DPE++A + L L PW + I
Sbjct 76 --VVAFEVDDYDVETRTGWSVAVVGIGRAVDDPEELALLESLPLQPWAPGPKPHFIRIMT 133
Query 138 EIVTGIRIVADS 149
+IV+G RI S
Sbjct 134 DIVSGRRIPKKS 145
>gi|329941711|ref|ZP_08290976.1| hypothetical protein SGM_6468 [Streptomyces griseoaurantiacus
M045]
gi|329299428|gb|EGG43328.1| hypothetical protein SGM_6468 [Streptomyces griseoaurantiacus
M045]
Length=139
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/135 (45%), Positives = 79/135 (59%), Gaps = 25/135 (18%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADA 78
+DR E +RLLA V GR+V+TR ALPA+ PVN V+DG SV +R+SA +
Sbjct 9 MDRQECLRLLAEVPVGRIVYTRHALPAVLPVN-FVLDG----------DSSVLLRTSAGS 57
Query 79 -------GVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLL----HPWVNM 127
GVVVA+EAD D +GWSVVVTG A+ V+DP A ++RLL W+ +
Sbjct 58 DLLRAVDGVVVAFEADSFDAVSHSGWSVVVTGPASAVTDP---AEHERLLRTGPQSWMPI 114
Query 128 AMDTVVAIEPEIVTG 142
D + IE +VTG
Sbjct 115 QEDVFIRIEAAMVTG 129
>gi|302556716|ref|ZP_07309058.1| helix-turn-helix domain-containing protein [Streptomyces griseoflavus
Tu4000]
gi|302474334|gb|EFL37427.1| helix-turn-helix domain-containing protein [Streptomyces griseoflavus
Tu4000]
Length=149
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/136 (47%), Positives = 80/136 (59%), Gaps = 15/136 (11%)
Query 18 ELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNH-LVVDGRVIGRTRLTAKVSVAVRSSA 76
EL R E +RL+A V GR+VFTR ALPA+ PVN L DG V+ RT +++ AV
Sbjct 9 ELGRQECLRLMARVPVGRIVFTRRALPAVLPVNFRLDADGAVLLRTAADSELVRAVD--- 65
Query 77 DAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLH-----PWVNMAMDT 131
G VVA+EADD+DP R GWSVVVTG A V+D + QR L W A +
Sbjct 66 --GAVVAFEADDIDPDRHAGWSVVVTGPARVVTDTAE----QRRLAVTGPVSWAPSAREV 119
Query 132 VVAIEPEIVTGIRIVA 147
V +E E+V+G +VA
Sbjct 120 FVRVESELVSGRELVA 135
>gi|294633269|ref|ZP_06711828.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292831050|gb|EFF89400.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=146
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/132 (48%), Positives = 80/132 (61%), Gaps = 7/132 (5%)
Query 18 ELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNH-LVVDGRVIGRTRLTAKVSVAVRSSA 76
EL+R E +RLLA GRVV TR ALPA+ PVN L DG V+ RT A S VRS
Sbjct 9 ELERQECLRLLAKAPVGRVVHTRHALPAVLPVNFWLDGDGAVLLRT---AADSGLVRSID 65
Query 77 DAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQR-LLHPWVNMAMDTVVAI 135
G +VA+EAD++D +GWSVVVTG A+ V+DP ++ R R W + +V I
Sbjct 66 --GAIVAFEADEVDAGAHSGWSVVVTGTASVVTDPAELRRLDRDGPRSWAPSPREVIVRI 123
Query 136 EPEIVTGIRIVA 147
EPE+VTG +V
Sbjct 124 EPELVTGRELVG 135
>gi|331696126|ref|YP_004332365.1| hypothetical protein Psed_2299 [Pseudonocardia dioxanivorans
CB1190]
gi|326950815|gb|AEA24512.1| hypothetical protein Psed_2299 [Pseudonocardia dioxanivorans
CB1190]
Length=133
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/98 (49%), Positives = 63/98 (65%), Gaps = 5/98 (5%)
Query 18 ELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSAD 77
ELDR E +RLLA GR+VFT AA+PA PVN LV ++ RT + AV
Sbjct 7 ELDRGECLRLLAGAAIGRLVFTHAAMPAAHPVNFLVDGDEIVFRTCPDGPLLRAVN---- 62
Query 78 AGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVA 115
GVVV ++ADD+DP RTGWSV+ G A E++DP+++A
Sbjct 63 -GVVVGFQADDVDPATRTGWSVLAVGEAYEITDPQRLA 99
>gi|269126196|ref|YP_003299566.1| hypothetical protein Tcur_1961 [Thermomonospora curvata DSM 43183]
gi|268311154|gb|ACY97528.1| hypothetical protein Tcur_1961 [Thermomonospora curvata DSM 43183]
Length=155
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/138 (38%), Positives = 73/138 (53%), Gaps = 5/138 (3%)
Query 14 REVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVR 73
R + L E++RL + GR+VF +P IRPVNH+V +I RT + V V
Sbjct 20 RRIQRLRSAESLRLAGTSPLGRLVFNLYGVPTIRPVNHIVEGEDIIFRTHGDSAV---VE 76
Query 74 SSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDT-- 131
+ ++VAYE D D R GWSVV+ G A V D + ARY L PW++ D
Sbjct 77 ALGTGEMLVAYEVDHFDLDARLGWSVVINGTARRVLDVREAARYLALTDPWLDNGRDKNY 136
Query 132 VVAIEPEIVTGIRIVADS 149
V+ I P++V G ++V D
Sbjct 137 VIRIRPKLVFGFQVVPDE 154
>gi|21218768|ref|NP_624547.1| hypothetical protein SCO0214 [Streptomyces coelicolor A3(2)]
gi|289774116|ref|ZP_06533494.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|5777687|emb|CAB53438.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289704315|gb|EFD71744.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=137
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/129 (47%), Positives = 73/129 (57%), Gaps = 7/129 (5%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNH-LVVDGRVIGRTRLTAKVSVAVRSSAD 77
L+R E +RLL S GR+V+TR ALPA+ PVN L D V+ RT + + AV
Sbjct 10 LERAECLRLLGSAPVGRIVYTREALPAVLPVNFSLDTDASVVLRTSAGSDLVRAVD---- 65
Query 78 AGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARY-QRLLHPWVNMAMDTVVAIE 136
G VVA+EAD D R+GWSVVVTG AT V+DP AR + WV V IE
Sbjct 66 -GAVVAFEADAFDAHDRSGWSVVVTGRATVVTDPAARARLAENGPRSWVVSRDGLYVRIE 124
Query 137 PEIVTGIRI 145
E+VTG I
Sbjct 125 SEMVTGREI 133
>gi|118469347|ref|YP_889382.1| hypothetical protein MSMEG_5136 [Mycobacterium smegmatis str.
MC2 155]
gi|118170634|gb|ABK71530.1| helix-turn-helix motif [Mycobacterium smegmatis str. MC2 155]
Length=150
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (56%), Gaps = 6/135 (4%)
Query 12 SAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVA 71
+E+ L R + + LL V GR+VFT ALPA++PVN + VI R K+S A
Sbjct 3 KGQELDVLSRRQCLDLLQRVRVGRLVFTEDALPAVQPVNFRLSHDDVIIRVAGGGKLSAA 62
Query 72 VRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQ-RLLHPWVNMAMD 130
++ VVA+EAD+LDP RTGWSV V G A ++D +Q+ + PWV+ D
Sbjct 63 AKNQ-----VVAFEADELDPDLRTGWSVTVVGHAEPITDIDQLVEVAGTFVQPWVDGKRD 117
Query 131 TVVAIEPEIVTGIRI 145
V I E +TG +I
Sbjct 118 HFVRIRTERITGRQI 132
>gi|271965559|ref|YP_003339755.1| hypothetical protein Sros_4105 [Streptosporangium roseum DSM
43021]
gi|270508734|gb|ACZ87012.1| hypothetical protein Sros_4105 [Streptosporangium roseum DSM
43021]
Length=135
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/128 (40%), Positives = 69/128 (54%), Gaps = 6/128 (4%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADA 78
L R E + LLAS GR+VFT ALPA++PV + ++ T + K++ A R +
Sbjct 11 LSRQECIDLLASTPIGRIVFTDRALPAVQPVGFCIDGEDIVIHTGVGTKLAAATRDA--- 67
Query 79 GVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMAMDTVVAIEP 137
VVA+EADD DP+ TGWSV G A V DP ++AR L L W + +
Sbjct 68 --VVAFEADDFDPQAHTGWSVTAVGRARAVCDPSEIARLSALPLTTWAPGDRGHFITVRT 125
Query 138 EIVTGIRI 145
E V+G RI
Sbjct 126 EQVSGRRI 133
>gi|108800588|ref|YP_640785.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. MCS]
gi|119869727|ref|YP_939679.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. KMS]
gi|126436204|ref|YP_001071895.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. JLS]
gi|108771007|gb|ABG09729.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. MCS]
gi|119695816|gb|ABL92889.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. KMS]
gi|126236004|gb|ABN99404.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. JLS]
Length=147
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/128 (40%), Positives = 72/128 (57%), Gaps = 6/128 (4%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADA 78
L+R + + LL V GR+VFT LPA+ PVN + VI R AK++ +A+
Sbjct 12 LNRRQCLDLLEGVRVGRLVFTEDGLPAVHPVNFRMKRDDVIIRVAGGAKLA-----AANK 66
Query 79 GVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQ-RLLHPWVNMAMDTVVAIEP 137
+VVA+EAD+LDP RTGWSV + G A +SD +++ L PWV D + IE
Sbjct 67 NMVVAFEADELDPDLRTGWSVTIVGTAHPISDVDELVEVSGTFLEPWVEGRRDHFIRIEA 126
Query 138 EIVTGIRI 145
+ +TG R
Sbjct 127 QKMTGRRF 134
>gi|289774132|ref|ZP_06533510.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289704331|gb|EFD71760.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=146
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/134 (42%), Positives = 84/134 (63%), Gaps = 11/134 (8%)
Query 18 ELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVD-GRVIGRTRLTAKVSVAVRSSA 76
EL+R E+++ LA+ GR+V TR ALPA+ PVN ++ + G V+ RT ++++ AV
Sbjct 9 ELNRQESLQRLANAPVGRIVHTRDALPAVLPVNFILEESGAVLLRTSASSELVRAVD--- 65
Query 77 DAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDP---EQVARYQRLLHPWVNMAMDTVV 133
G VVA+EAD++D +GWSVVVTGLA+ V+DP EQ+ R WV ++ V
Sbjct 66 --GAVVAFEADEVDAVTHSGWSVVVTGLASVVTDPGEHEQLVRTGP--RSWVPWPVEVFV 121
Query 134 AIEPEIVTGIRIVA 147
I P++V+G +V
Sbjct 122 RIAPDLVSGRELVG 135
>gi|302562253|ref|ZP_07314595.1| helix-turn-helix domain-containing protein [Streptomyces griseoflavus
Tu4000]
gi|302479871|gb|EFL42964.1| helix-turn-helix domain-containing protein [Streptomyces griseoflavus
Tu4000]
Length=137
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/129 (46%), Positives = 74/129 (58%), Gaps = 13/129 (10%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNH-LVVDGRVIGRTRLTAKVSVAVRSSAD 77
L+R E +RLLA GRVV+TR ALPA+ PVN L D V+ T + + AV
Sbjct 10 LERQECLRLLAKAPVGRVVYTRQALPAVLPVNFALDTDSAVVLCTSAASDLVRAVD---- 65
Query 78 AGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLL----HPWVNMAMDTVV 133
GVVVA+EADD D R+GWSVVVTG A V+D A + RLL W+ M +
Sbjct 66 -GVVVAFEADDFDAGSRSGWSVVVTGRAAVVTD---AAEHGRLLRTGPRSWLPMRDGVFI 121
Query 134 AIEPEIVTG 142
I+ E+VTG
Sbjct 122 RIDAEMVTG 130
>gi|269124763|ref|YP_003298133.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Thermomonospora
curvata DSM 43183]
gi|268309721|gb|ACY96095.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Thermomonospora curvata DSM 43183]
Length=201
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/146 (42%), Positives = 80/146 (55%), Gaps = 9/146 (6%)
Query 2 SPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGR-VIG 60
+PG+R P +V L E + LL + GR+VFT ALPAI+PVN +DG +I
Sbjct 57 APGTRH-PPGDGGQVASLSPQECLALLRTASIGRIVFTDRALPAIQPVN-FALDGEDIII 114
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RTR K++ A R + VA+EADDLDP GW+V + G A V DP QV R RL
Sbjct 115 RTRPGTKLAAATRRAV-----VAFEADDLDPETGAGWTVTLVGQAEAVRDPGQVVRLLRL 169
Query 121 -LHPWVNMAMDTVVAIEPEIVTGIRI 145
L+PW + + I +TG R+
Sbjct 170 PLYPWSPEPLHHFIRIRTHRITGRRV 195
>gi|21218753|ref|NP_624532.1| hypothetical protein SCO0197 [Streptomyces coelicolor A3(2)]
gi|5777672|emb|CAB53421.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length=146
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/134 (43%), Positives = 82/134 (62%), Gaps = 11/134 (8%)
Query 18 ELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNH-LVVDGRVIGRTRLTAKVSVAVRSSA 76
EL+R E+++ LA+ GR+V TR ALPA+ PVN L G V+ RT ++++ AV
Sbjct 9 ELNRQESLQRLANAPVGRIVHTRDALPAVLPVNFVLEKSGAVLLRTSASSELVRAVD--- 65
Query 77 DAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDP---EQVARYQRLLHPWVNMAMDTVV 133
G VVA+EAD++D +GWSVVVTGLA+ V+DP EQ+ R WV ++ V
Sbjct 66 --GAVVAFEADEVDAVTHSGWSVVVTGLASVVTDPGEHEQLVRTGP--RSWVPWPVEVFV 121
Query 134 AIEPEIVTGIRIVA 147
I P++V+G +V
Sbjct 122 RIAPDLVSGRELVG 135
>gi|311899769|dbj|BAJ32177.1| hypothetical protein KSE_64180 [Kitasatospora setae KM-6054]
Length=152
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/136 (42%), Positives = 74/136 (55%), Gaps = 7/136 (5%)
Query 19 LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLV-VDGRVIGRTRLTAKVSVAVRSSAD 77
L E +RLL +V GRVV+T ALPA+ PV V DGR+I R +V+ A+
Sbjct 10 LSEAECLRLLGTVPLGRVVYTEHALPAVLPVAFRVAADGRLILALRAGTRVARAL----- 64
Query 78 AGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDP-EQVARYQRLLHPWVNMAMDTVVAIE 136
G V A++ DD D R GWSV+V G A V D E+ A L PW+ VAI
Sbjct 65 DGTVAAFQVDDFDRAGRCGWSVLVHGRAEVVRDAGERAALRSGGLRPWIPDPGPEYVAIT 124
Query 137 PEIVTGIRIVADSRTP 152
PE+V+G RI+ D+ P
Sbjct 125 PELVSGRRILPDAGEP 140
>gi|271966178|ref|YP_003340374.1| hypothetical protein Sros_4808 [Streptosporangium roseum DSM
43021]
gi|270509353|gb|ACZ87631.1| hypothetical protein Sros_4808 [Streptosporangium roseum DSM
43021]
Length=223
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/146 (35%), Positives = 72/146 (50%), Gaps = 3/146 (2%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
+ PG R +P E L+ +E +RL+A GRV F PAI PVN+++ D VI
Sbjct 76 LPPGRGRPTPHPHLE--RLEAEECLRLIAPGGVGRVAFNEPGGPAILPVNYVLRDNSVIV 133
Query 61 RTRLTAKVSVAVRSSADA-GVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQR 119
RT + + +R+ +A+E D +D R GWSV++ G A VS EQ A
Sbjct 134 RTAVGGPLDDNLRTGVQGVEFKIAFEIDRIDDASREGWSVLIRGGAHHVSADEQAAAATS 193
Query 120 LLHPWVNMAMDTVVAIEPEIVTGIRI 145
+ PW + + I P +TG RI
Sbjct 194 GVQPWAGGERELYLKIVPAEITGRRI 219
>gi|29827812|ref|NP_822446.1| DNA-binding protein [Streptomyces avermitilis MA-4680]
gi|29604913|dbj|BAC68981.1| putative DNA-binding protein [Streptomyces avermitilis MA-4680]
Length=208
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/148 (38%), Positives = 77/148 (53%), Gaps = 10/148 (6%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
+ PG RA+ E++EL +E L++ GR+ P I P+N+ VVDG V
Sbjct 67 LPPGVGRAAAHP--ELLELSDEECRARLSTHGVGRLAVDTPTGPVIVPLNYSVVDGVVCF 124
Query 61 RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL 120
RT ++ +A AG VA+E D +D GWSV+V GLA V+DP+ + R L
Sbjct 125 RTAADSE------PAASAGSRVAFEVDHIDEALSQGWSVLVRGLARLVTDPDTLRRLAEL 178
Query 121 LH--PWVNMAMDTVVAIEPEIVTGIRIV 146
+ PW DT V ++P VTG RIV
Sbjct 179 AYSGPWAGGERDTWVCVDPVGVTGRRIV 206
>gi|46205746|ref|ZP_00048143.2| hypothetical protein Magn03001018 [Magnetospirillum magnetotacticum
MS-1]
Length=145
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/138 (40%), Positives = 82/138 (60%), Gaps = 6/138 (4%)
Query 10 PQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVS 69
P+++ + EL +E+ LLA+V GR+V+T ALPAI+PVN ++ V+ RT +K++
Sbjct 12 PRASAGLAELTPEESYALLATVPVGRIVYTDHALPAIQPVNFVLDGPDVVFRTAEGSKLA 71
Query 70 VAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMA 128
VA + VA+E D D R+GWSVV+ G EV++P + AR L L +V
Sbjct 72 VAASRAV-----VAFEVDSFDADARSGWSVVLVGRTFEVTEPVERARLLALPLVTFVPGV 126
Query 129 MDTVVAIEPEIVTGIRIV 146
D V+ + P IVTG RI+
Sbjct 127 RDRVIKVVPRIVTGRRIL 144
>gi|297561213|ref|YP_003680187.1| hypothetical protein Ndas_2259 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845661|gb|ADH67681.1| hypothetical protein Ndas_2259 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=190
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/131 (36%), Positives = 67/131 (52%), Gaps = 10/131 (7%)
Query 19 LDRDEAMRLLASVDHGRVVFT--RAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSA 76
L+R LLA+ D GRV FT A P + PVN+ +VDG ++ R+ L + R A
Sbjct 63 LERQTCFNLLATRDIGRVAFTIEGDAAPTVLPVNYTMVDGGIVFRSTLAGAIMRHARGYA 122
Query 77 DAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQR--LLHPWVNMAMDTVVA 134
A++ D LD RR GWSV+ +G + D ++AR + L PW D V+
Sbjct 123 ------AFQVDSLDEERREGWSVLASGPCAWIRDAAELARLPQGGLPRPWAEGERDQVLR 176
Query 135 IEPEIVTGIRI 145
I P ++G RI
Sbjct 177 ITPGRLSGRRI 187
>gi|271967432|ref|YP_003341628.1| hypothetical protein Sros_6155 [Streptosporangium roseum DSM
43021]
gi|270510607|gb|ACZ88885.1| hypothetical protein Sros_6155 [Streptosporangium roseum DSM
43021]
Length=225
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/143 (37%), Positives = 71/143 (50%), Gaps = 3/143 (2%)
Query 9 SPQSAREVVE-LDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAK 67
P AR +E LD DE MRL++ GRV F P I PVN++V DG ++ RT L
Sbjct 81 GPAGARPHLEKLDPDECMRLISPGGVGRVAFDTPTGPVILPVNYVVHDGALLLRTALGGP 140
Query 68 VSVAVRSSADA-GVVVAYEADDLDPRRRTGWSVVVTGLATEV-SDPEQVARYQRLLHPWV 125
+ +R+ +A+E D +D R GWSV+V G A + S+ EQ A + PW
Sbjct 141 LDEDLRTGVKGVEFKIAFEIDRIDDPNRQGWSVLVRGPAHHISSEEEQAAVTGVDVEPWA 200
Query 126 NMAMDTVVAIEPEIVTGIRIVAD 148
+ I P +TG RI D
Sbjct 201 GGERKLYIRITPVEITGRRIRHD 223
>gi|220912640|ref|YP_002487949.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Arthrobacter
chlorophenolicus A6]
gi|219859518|gb|ACL39860.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Arthrobacter
chlorophenolicus A6]
Length=155
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/138 (40%), Positives = 67/138 (49%), Gaps = 6/138 (4%)
Query 9 SPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKV 68
S +S+ +V L+ E +L +V GR+ P I P+N+ V G V+ RT K+
Sbjct 2 SNESSPDVQNLEHHECWAMLRTVSVGRLAVLSDGRPDIFPINYTVDGGTVVFRTGQGTKL 61
Query 69 SVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNM 127
S A S DA V V EAD +DP WSVVV G A V E V RL L PW
Sbjct 62 SAA---SGDAAVAV--EADGVDPESGLAWSVVVKGTAEVVKGAEDVLDTSRLYLFPWQAG 116
Query 128 AMDTVVAIEPEIVTGIRI 145
D V I PE VTG R
Sbjct 117 RKDAFVRITPESVTGRRF 134
>gi|271965960|ref|YP_003340156.1| hypothetical protein Sros_4549 [Streptosporangium roseum DSM
43021]
gi|270509135|gb|ACZ87413.1| hypothetical protein Sros_4549 [Streptosporangium roseum DSM
43021]
Length=236
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/147 (35%), Positives = 73/147 (50%), Gaps = 4/147 (2%)
Query 1 MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG 60
+ PG R P + E+ +LD DE +RL++ GRV F PAI PVN+++ +G VI
Sbjct 76 LPPG--RGRPAALPELEKLDSDECLRLISPGGVGRVAFNDLGGPAILPVNYVLHEGSVIF 133
Query 61 RTRLTAKVSVAVRSSADA-GVVVAYEADDLDPRRRTGWSVVV-TGLATEVSDPEQVARYQ 118
RT + +R+ +A+E D +D + GWSV+V GL + EQ A
Sbjct 134 RTAFGGPLDADLRTGVKGVDFKIAFEVDRIDEANQEGWSVLVRGGLHHAATAGEQAAAAA 193
Query 119 RLLHPWVNMAMDTVVAIEPEIVTGIRI 145
+ PW + V I P +TG RI
Sbjct 194 SGVQPWAGGDRELYVRIVPAEITGRRI 220
>gi|72163432|ref|YP_291089.1| helix-hairpin-helix DNA-binding motif-containing protein [Thermobifida
fusca YX]
gi|71917164|gb|AAZ57066.1| helix-turn-helix motif [Thermobifida fusca YX]
Length=225
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/139 (35%), Positives = 72/139 (52%), Gaps = 9/139 (6%)
Query 15 EVVELDRDEAMRLLASVDHGRVVFTR--AALPAIRPVNHLVVDGRVIGRTRLTAKVSVAV 72
++ E+D E M L+ + GR+ FT A P + PVN LV + +I RT + +A
Sbjct 90 KLQEIDSQECMELIKAGGVGRIAFTMPGEAAPTVLPVNFLVRNETIIFRT--SGHGIIAE 147
Query 73 RSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL--LHPWVNMAMD 130
+S +++E D LD GWSV+V GLA V DP ++ R ++ + PW D
Sbjct 148 HASNQ---YISFEVDRLDGMTNEGWSVLVVGLARPVRDPVELERLRKTAPVQPWAAGDRD 204
Query 131 TVVAIEPEIVTGIRIVADS 149
+ I P+ VTG RI +S
Sbjct 205 LFITIIPKQVTGRRIEHES 223
>gi|336117822|ref|YP_004572590.1| hypothetical protein MLP_21730 [Microlunatus phosphovorus NM-1]
gi|334685602|dbj|BAK35187.1| hypothetical protein MLP_21730 [Microlunatus phosphovorus NM-1]
Length=142
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/132 (33%), Positives = 67/132 (51%), Gaps = 6/132 (4%)
Query 15 EVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRS 74
++VELDR E++RLLA+ GR+ F P + P+N + R++ RT + AV +
Sbjct 15 KIVELDRAESLRLLAAKKVGRLAFVHDGAPTVMPMNFTLAGDRIVFRTLAHGSGARAVDN 74
Query 75 SADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVA 134
VA+E DD+D GWSVVV G A +++ E + PW +A
Sbjct 75 P------VAFEVDDIDDFLEAGWSVVVNGTAELLTEEELNQLREHAPEPWAEGPRTLFIA 128
Query 135 IEPEIVTGIRIV 146
I + V+G ++V
Sbjct 129 IPMDQVSGRQLV 140
>gi|325963244|ref|YP_004241150.1| flavin-nucleotide-binding protein [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469331|gb|ADX73016.1| putative flavin-nucleotide-binding protein [Arthrobacter phenanthrenivorans
Sphe3]
Length=147
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/129 (38%), Positives = 63/129 (49%), Gaps = 6/129 (4%)
Query 18 ELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSAD 77
L+ E +L +V GR+ T P I P+N+ V G ++ RT K+S A +A
Sbjct 3 NLEHHECWAMLRTVSVGRLAITAGGRPDIFPINYTVDRGTLVFRTSEGTKLSGASEDAA- 61
Query 78 AGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMAMDTVVAIE 136
VA EAD +DP WSVVV G A V+ EQV +L L PW D V I
Sbjct 62 ----VAVEADGVDPDTGLAWSVVVKGTAAVVTGTEQVLDTTQLYLFPWQAGRKDVFVRIT 117
Query 137 PEIVTGIRI 145
P+ VTG R
Sbjct 118 PDSVTGRRF 126
>gi|254381383|ref|ZP_04996748.1| hypothetical protein SSAG_01050 [Streptomyces sp. Mg1]
gi|194340293|gb|EDX21259.1| hypothetical protein SSAG_01050 [Streptomyces sp. Mg1]
Length=143
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/138 (31%), Positives = 71/138 (52%), Gaps = 15/138 (10%)
Query 15 EVVELDRDEAMRLLASVDHGR------VVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKV 68
+ ++ E + LL HGR +V+ R IRP H++ GR++ V
Sbjct 8 NLTDMSGAEVLWLLEGASHGRPLYRGRLVYVRREQAVIRPATHVMACGRLV--------V 59
Query 69 SVAVRSSADAG-VVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNM 127
V++SA AG V+ Y+ D + PR TGW++ V G A ++D ++ A Y+R+L
Sbjct 60 RAPVQTSAVAGRTVLTYQVDQIHPRTGTGWTLTVHGPAEVITDTDETAHYRRILPGMAYG 119
Query 128 AMDTVVAIEPEIVTGIRI 145
DT++ + P+ +TG R+
Sbjct 120 PHDTLLRLHPQALTGHRL 137
>gi|257055020|ref|YP_003132852.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
gi|256584892|gb|ACU96025.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
Length=136
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/137 (38%), Positives = 70/137 (52%), Gaps = 9/137 (6%)
Query 15 EVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRS 74
E+ L E + LL + GR+VFT ALPAIRPVN ++ V+ RT A +
Sbjct 6 EMYPLTEAECLDLLKTEVVGRLVFTENALPAIRPVNFMLAGRDVVIRTVPEAW------T 59
Query 75 SADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHP--WVNMAMDTV 132
AG VVA+E D +D TGWSVV+ G AT ++D E++ R + P W D
Sbjct 60 HRVAGAVVAFEVDRIDSAAHTGWSVVLLGTATALTDAEELRRVT-AVGPRRWDTRHSDHY 118
Query 133 VAIEPEIVTGIRIVADS 149
+ I P TG R+ S
Sbjct 119 LRIRPGQFTGRRLSLSS 135
>gi|54027872|ref|YP_122112.1| hypothetical protein pnf2620 [Nocardia farcinica IFM 10152]
gi|54019380|dbj|BAD60748.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=132
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/133 (34%), Positives = 68/133 (52%), Gaps = 7/133 (5%)
Query 14 REVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVR 73
+++ + E LL SV R+ + +PAIRP+N V R++ T A
Sbjct 2 KKLSTISDTECRVLLRSVPVARIAYLEDGVPAIRPINFTVAGDRIVVWTVPGA------H 55
Query 74 SSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSD-PEQVARYQRLLHPWVNMAMDTV 132
SA G VA + D +DP +GW+V++TG AT +SD E VA PWV D V
Sbjct 56 GSAVTGQTVAVQVDRIDPDSHSGWTVLITGPATAISDIDELVAAADIPRRPWVTTPHDQV 115
Query 133 VAIEPEIVTGIRI 145
+ I+ E ++G+R+
Sbjct 116 IGIDIERISGLRL 128
Lambda K H
0.319 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128332939266
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40