BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0083 Length=640 Score E Sequences producing significant alignments: (Bits) Value gi|15607225|ref|NP_214597.1| oxidoreductase [Mycobacterium tuber... 1223 0.0 gi|121635996|ref|YP_976219.1| putative oxidoreductase [Mycobacte... 1222 0.0 gi|307082208|ref|ZP_07491378.1| oxidoreductase [Mycobacterium tu... 1221 0.0 gi|298527475|ref|ZP_07014884.1| NADH dehydrogenase subunit n [My... 1221 0.0 gi|31791261|ref|NP_853754.1| oxidoreductase [Mycobacterium bovis... 1221 0.0 gi|289747850|ref|ZP_06507228.1| conserved hypothetical protein [... 1220 0.0 gi|289572663|ref|ZP_06452890.1| oxidoreductase [Mycobacterium tu... 1217 0.0 gi|289760182|ref|ZP_06519560.1| oxidoreductase [Mycobacterium tu... 1030 0.0 gi|340625118|ref|YP_004743570.1| putative oxidoreductase [Mycoba... 956 0.0 gi|289756144|ref|ZP_06515522.1| oxidoreductase [Mycobacterium tu... 951 0.0 gi|306787064|ref|ZP_07425386.1| putative NADH-Ubiquinone/plastoq... 950 0.0 gi|289748550|ref|ZP_06507928.1| oxidoreductase [Mycobacterium tu... 937 0.0 gi|323717425|gb|EGB26630.1| oxidoreductase [Mycobacterium tuberc... 912 0.0 gi|307082549|ref|ZP_07491662.1| putative NADH-Ubiquinone/plastoq... 861 0.0 gi|306778909|ref|ZP_07417246.1| oxidoreductase [Mycobacterium tu... 834 0.0 gi|118464570|ref|YP_884231.1| NADH dehydrogenase subunit n [Myco... 821 0.0 gi|306778377|ref|ZP_07416714.1| oxidoreductase [Mycobacterium tu... 818 0.0 gi|289764199|ref|ZP_06523577.1| LOW QUALITY PROTEIN: oxidoreduct... 800 0.0 gi|183981669|ref|YP_001849960.1| oxidoreductase [Mycobacterium m... 800 0.0 gi|342862432|ref|ZP_08719072.1| NADH dehydrogenase subunit n [My... 796 0.0 gi|118617492|ref|YP_905824.1| oxidoreductase [Mycobacterium ulce... 787 0.0 gi|289552334|ref|ZP_06441544.1| oxidoreductase [Mycobacterium tu... 758 0.0 gi|240169555|ref|ZP_04748214.1| oxidoreductase [Mycobacterium ka... 729 0.0 gi|333991243|ref|YP_004523857.1| oxidoreductase [Mycobacterium s... 724 0.0 gi|317126125|ref|YP_004100237.1| NADH/Ubiquinone/plastoquinone (... 576 4e-162 gi|258653155|ref|YP_003202311.1| NADH/Ubiquinone/plastoquinone (... 533 3e-149 gi|331694629|ref|YP_004330868.1| NADH dehydrogenase (quinone) [P... 514 2e-143 gi|269128892|ref|YP_003302262.1| NADH/Ubiquinone/plastoquinone (... 505 9e-141 gi|296166650|ref|ZP_06849076.1| possible oxidoreductase [Mycobac... 441 2e-121 gi|119718688|ref|YP_925653.1| NADH dehydrogenase (quinone) [Noca... 437 3e-120 gi|258593560|emb|CBE69901.1| conserved membrane protein of unkno... 393 5e-107 gi|296166651|ref|ZP_06849077.1| thiamine biosynthesis protein Th... 383 4e-104 gi|306778910|ref|ZP_07417247.1| oxidoreductase [Mycobacterium tu... 377 2e-102 gi|147919456|ref|YP_686804.1| hydrogenase, membrane subunit 4-li... 372 2e-100 gi|302039531|ref|YP_003799853.1| formate hydrogenlyase, membrane... 369 9e-100 gi|325288314|ref|YP_004264495.1| NADH dehydrogenase (quinone) [S... 365 1e-98 gi|334341772|ref|YP_004546752.1| NADH/Ubiquinone/plastoquinone (... 352 1e-94 gi|182414276|ref|YP_001819342.1| NADH dehydrogenase (quinone) [O... 351 2e-94 gi|340344615|ref|ZP_08667747.1| NADH dehydrogenase (Quinone) [Ni... 347 4e-93 gi|344943801|ref|ZP_08783087.1| NADH dehydrogenase (quinone) [Me... 343 5e-92 gi|338812160|ref|ZP_08624349.1| NADH dehydrogenase (quinone) [Ac... 336 8e-90 gi|114775569|ref|ZP_01451137.1| NADH dehydrogenase subunit N [Ma... 332 1e-88 gi|344345384|ref|ZP_08776236.1| NADH dehydrogenase (quinone) [Ma... 327 4e-87 gi|333983295|ref|YP_004512505.1| NADH dehydrogenase (quinone) [M... 325 2e-86 gi|91202879|emb|CAJ72518.1| similar to membrane-bound [NiFe]-hyd... 323 5e-86 gi|56477810|ref|YP_159399.1| hydrogenase 4 subunit B [Aromatoleu... 320 4e-85 gi|258514101|ref|YP_003190323.1| NADH/Ubiquinone/plastoquinone (... 319 1e-84 gi|113868172|ref|YP_726661.1| hydrogenase 4 subunit B [Ralstonia... 318 1e-84 gi|154150670|ref|YP_001404288.1| hydrogenase membrane subunit [C... 318 2e-84 gi|220929113|ref|YP_002506022.1| NADH/Ubiquinone/plastoquinone (... 318 3e-84 >gi|15607225|ref|NP_214597.1| oxidoreductase [Mycobacterium tuberculosis H37Rv] gi|15839464|ref|NP_334501.1| NADH-ubiquinone oxidoreductase, putative [Mycobacterium tuberculosis CDC1551] gi|148659845|ref|YP_001281368.1| putative NADH-ubiquinone oxidoreductase [Mycobacterium tuberculosis H37Ra] 37 more sequence titles Length=640 Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 640/640 (100%), Positives = 640/640 (100%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT Sbjct 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 >gi|121635996|ref|YP_976219.1| putative oxidoreductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988469|ref|YP_002643156.1| putative oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] gi|121491643|emb|CAL70101.1| Probable oxidoreductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771582|dbj|BAH24388.1| putative oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] gi|341600012|emb|CCC62680.1| probable oxidoreductase [Mycobacterium bovis BCG str. Moreau RDJ] Length=642 Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 640/640 (100%), Positives = 640/640 (100%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT Sbjct 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 >gi|307082208|ref|ZP_07491378.1| oxidoreductase [Mycobacterium tuberculosis SUMu011] gi|308360155|gb|EFP49006.1| oxidoreductase [Mycobacterium tuberculosis SUMu011] Length=640 Score = 1221 bits (3160), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/640 (99%), Positives = 639/640 (99%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLP MSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL Sbjct 481 FTGLGAVVRLPXMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT Sbjct 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 >gi|298527475|ref|ZP_07014884.1| NADH dehydrogenase subunit n [Mycobacterium tuberculosis 94_M4241A] gi|298497269|gb|EFI32563.1| NADH dehydrogenase subunit n [Mycobacterium tuberculosis 94_M4241A] Length=640 Score = 1221 bits (3159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/640 (99%), Positives = 639/640 (99%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTK FGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKVFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT Sbjct 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 >gi|31791261|ref|NP_853754.1| oxidoreductase [Mycobacterium bovis AF2122/97] gi|31616846|emb|CAD92948.1| PROBABLE OXIDOREDUCTASE [Mycobacterium bovis AF2122/97] Length=642 Score = 1221 bits (3159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/640 (99%), Positives = 639/640 (99%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVR AVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRVAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT Sbjct 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 >gi|289747850|ref|ZP_06507228.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289688378|gb|EFD55866.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=640 Score = 1220 bits (3157), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/640 (99%), Positives = 639/640 (99%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAG CLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGPCLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT Sbjct 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 >gi|289572663|ref|ZP_06452890.1| oxidoreductase [Mycobacterium tuberculosis K85] gi|339630167|ref|YP_004721809.1| oxidoreductase [Mycobacterium africanum GM041182] gi|289537094|gb|EFD41672.1| oxidoreductase [Mycobacterium tuberculosis K85] gi|339329523|emb|CCC25158.1| putative oxidoreductase [Mycobacterium africanum GM041182] Length=640 Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/640 (99%), Positives = 639/640 (99%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWL RAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLLRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAA+L Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAAEL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT Sbjct 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 >gi|289760182|ref|ZP_06519560.1| oxidoreductase [Mycobacterium tuberculosis T85] gi|289715746|gb|EFD79758.1| oxidoreductase [Mycobacterium tuberculosis T85] Length=544 Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/544 (100%), Positives = 544/544 (100%), Gaps = 0/544 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 Query 541 TVRM 544 TVRM Sbjct 541 TVRM 544 >gi|340625118|ref|YP_004743570.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059] gi|340003308|emb|CCC42425.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059] Length=640 Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/640 (90%), Positives = 595/640 (93%), Gaps = 0/640 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGG VTSGVGV GVGVGLLGMFGP R H+GWLLPLSG+HIELDRLGGFFMALT Sbjct 1 MTAAPTAGGAVTSGVGVVGVGVGLLGMFGPTRAAHIGWLLPLSGIHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVA PVGCYLIGY RREHLGRV +AVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAVPVGCYLIGYARREHLGRVAVAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEH RPQVR+AGLWYAVMTQLGFIA+LVGLVVLAAAGGSDRFAGLGAV DGVR VF Sbjct 121 LVLSEHTRPQVRAAGLWYAVMTQLGFIALLVGLVVLAAAGGSDRFAGLGAVSDGVRTVVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 +LTL GFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLG YGI R DLQLLGPGPR Sbjct 181 VLTLAGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGCYGIARIDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVA DLKRLLAYSTTENMGLITLALGAATLFAD GAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVATDLKRLLAYSTTENMGLITLALGAATLFADAGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIA AAAMLH+IAHAAFKSLAF+AAGSVLAATGLRDLDLLGGLARRMPATT FFGVAAL Sbjct 301 ASIAVAAAMLHLIAHAAFKSLAFLAAGSVLAATGLRDLDLLGGLARRMPATTAFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFV EWLLVQSL+HAAPGHDP+VALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVGEWLLVQSLVHAAPGHDPVVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRS AEAAREAP SMRAGMA+ A ACL LAVAPLLVAP VR AAATLPAA++V+ Sbjct 421 GFLARPRSLHAEAAREAPVSMRAGMAMVAAACLALAVAPLLVAPAVRGAAATLPAARSVE 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADL 540 FT LGAVVRLP MSGSIAPGVIA VLAAAL VAVLARWR RRRPA A LPLWACGAA+L Sbjct 481 FTDLGAVVRLPGMSGSIAPGVIAGGVLAAALVVAVLARWRCRRRPASAILPLWACGAAEL 540 Query 541 TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYT 600 T RMQYTAT+FAEPLQRVF DVLRPDTD+EVTHTAESRYMAERITYRTA+ DAIE+RLY Sbjct 541 TARMQYTATAFAEPLQRVFDDVLRPDTDVEVTHTAESRYMAERITYRTAITDAIERRLYP 600 Query 601 PVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 PVVGAVAA A LLRRAH GSVH YLAYGALGVLIVLVVAR Sbjct 601 PVVGAVAAAAGLLRRAHPGSVHLYLAYGALGVLIVLVVAR 640 >gi|289756144|ref|ZP_06515522.1| oxidoreductase [Mycobacterium tuberculosis EAS054] gi|289696731|gb|EFD64160.1| oxidoreductase [Mycobacterium tuberculosis EAS054] Length=502 Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/502 (100%), Positives = 502/502 (100%), Gaps = 0/502 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVI 502 FTGLGAVVRLPAMSGSIAPGVI Sbjct 481 FTGLGAVVRLPAMSGSIAPGVI 502 >gi|306787064|ref|ZP_07425386.1| putative NADH-Ubiquinone/plastoquinone (complex I), various chains [Mycobacterium tuberculosis SUMu004] gi|308336251|gb|EFP25102.1| putative NADH-Ubiquinone/plastoquinone (complex I), various chains [Mycobacterium tuberculosis SUMu004] Length=501 Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/501 (100%), Positives = 501/501 (100%), Gaps = 0/501 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGV 501 FTGLGAVVRLPAMSGSIAPGV Sbjct 481 FTGLGAVVRLPAMSGSIAPGV 501 >gi|289748550|ref|ZP_06507928.1| oxidoreductase [Mycobacterium tuberculosis T92] gi|289689137|gb|EFD56566.1| oxidoreductase [Mycobacterium tuberculosis T92] Length=494 Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/494 (100%), Positives = 494/494 (100%), Gaps = 0/494 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMS 494 FTGLGAVVRLPAMS Sbjct 481 FTGLGAVVRLPAMS 494 >gi|323717425|gb|EGB26630.1| oxidoreductase [Mycobacterium tuberculosis CDC1551A] Length=480 Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/480 (100%), Positives = 480/480 (100%), Gaps = 0/480 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 >gi|307082549|ref|ZP_07491662.1| putative NADH-Ubiquinone/plastoquinone (complex I), various chains [Mycobacterium tuberculosis SUMu012] gi|308367718|gb|EFP56569.1| putative NADH-Ubiquinone/plastoquinone (complex I), various chains [Mycobacterium tuberculosis SUMu012] Length=545 Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/527 (99%), Positives = 524/527 (99%), Gaps = 2/527 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVK 480 Query 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAP 527 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRF PAP Sbjct 481 FTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRF--PPAP 525 >gi|306778909|ref|ZP_07417246.1| oxidoreductase [Mycobacterium tuberculosis SUMu002] gi|308328112|gb|EFP16963.1| oxidoreductase [Mycobacterium tuberculosis SUMu002] Length=436 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/436 (100%), Positives = 436/436 (100%), Gaps = 0/436 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAARE 436 GFLARPRSTQAEAARE Sbjct 421 GFLARPRSTQAEAARE 436 >gi|118464570|ref|YP_884231.1| NADH dehydrogenase subunit n [Mycobacterium avium 104] gi|118165857|gb|ABK66754.1| NADH dehydrogenase subunit n [Mycobacterium avium 104] Length=620 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/618 (77%), Positives = 528/618 (86%), Gaps = 0/618 (0%) Query 23 GLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGR 82 G+ +FG + VHVGWLLPLSG+ ++LD +GGFFMAL G VA PVG Y IGY RREHLGR Sbjct 3 GIAAVFGVRQTVHVGWLLPLSGLQLDLDPVGGFFMALIGGVAVPVGFYSIGYARREHLGR 62 Query 83 VPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMT 142 V +A++PLFVAAM+LVPAAGSVTTFLLAWELMA ASL+LVL++H RP+VRSAGL+YAVMT Sbjct 63 VSLAMLPLFVAAMMLVPAAGSVTTFLLAWELMATASLVLVLAQHTRPEVRSAGLFYAVMT 122 Query 143 QLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPR 202 QLGF+AIL+GL+VL+AAGG+DRFA L V DG R VF+LT+ GFGSKAGLVPLHAWLPR Sbjct 123 QLGFVAILIGLMVLSAAGGADRFADLTRVSDGARTVVFVLTMAGFGSKAGLVPLHAWLPR 182 Query 203 AHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQAS 262 AHPEAPSPVSALMSAAMVNLG+YGIVRFDLQLLGPGPRWW + LL VGG SA+YGVLQAS Sbjct 183 AHPEAPSPVSALMSAAMVNLGVYGIVRFDLQLLGPGPRWWAITLLVVGGVSAVYGVLQAS 242 Query 263 VAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLA 322 VA DLKRLLAYSTTENMGLITLALGAATL AD+GA+ A+IA AAA+LH+I HAAFKSL Sbjct 243 VATDLKRLLAYSTTENMGLITLALGAATLLADSGAHSAATIAMAAALLHLIGHAAFKSLG 302 Query 323 FMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLI 382 F+AAGSVLAATGLRDLDLLGGLARRMPATT FGVAALGA GLPLGAGFVSEWLLVQSLI Sbjct 303 FLAAGSVLAATGLRDLDLLGGLARRMPATTALFGVAALGASGLPLGAGFVSEWLLVQSLI 362 Query 383 HAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMR 442 HAAP H+ +VAL PLAVG VAL TGL VAAM KAFGIGFLARPRS A ARE PA M Sbjct 363 HAAPQHNTVVALAAPLAVGAVALTTGLGVAAMVKAFGIGFLARPRSQPAADAREVPAVMV 422 Query 443 AGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVI 502 AGMA+AA C+V+AVAPL+V M+ R LPA++AV FT GAV+RLP + GSIAPG I Sbjct 423 AGMALAATGCVVVAVAPLVVGSMLGRVLTELPASRAVAFTDFGAVLRLPGLHGSIAPGAI 482 Query 503 AAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDV 562 AAA+ AA LA LA WR RRR P LPLWACGA +LT RMQYTATSFAEPLQRVF DV Sbjct 483 AAALAAAVLAAVGLACWRSRRRSDPVTLPLWACGADELTPRMQYTATSFAEPLQRVFDDV 542 Query 563 LRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVH 622 LRPDTDIE+TH ESRY+AE +TYRT +ADAIE+RLY PV+GAVAA A+L+RRAHTGSVH Sbjct 543 LRPDTDIEITHLTESRYLAEAVTYRTRIADAIEERLYAPVIGAVAAAAQLVRRAHTGSVH 602 Query 623 RYLAYGALGVLIVLVVAR 640 YLAYG LGVLIVLVVAR Sbjct 603 LYLAYGMLGVLIVLVVAR 620 >gi|306778377|ref|ZP_07416714.1| oxidoreductase [Mycobacterium tuberculosis SUMu001] gi|308213368|gb|EFO72767.1| oxidoreductase [Mycobacterium tuberculosis SUMu001] Length=429 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/429 (100%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRST 429 GFLARPRST Sbjct 421 GFLARPRST 429 >gi|289764199|ref|ZP_06523577.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis GM 1503] gi|289711705|gb|EFD75721.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis GM 1503] Length=641 Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/505 (95%), Positives = 478/505 (95%), Gaps = 6/505 (1%) Query 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALT 60 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVV+VGWLLPLSGVHIELDRLGGFFMALT Sbjct 1 MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVYVGWLLPLSGVHIELDRLGGFFMALT 60 Query 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI Sbjct 61 GAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLI 120 Query 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF Sbjct 121 LVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVF 180 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR Sbjct 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP Sbjct 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL Sbjct 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI Sbjct 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAG---ACLVLAVAPLLVAPMVRRAAATLPAAQ 477 GFLARPRSTQAEAAREAPASMRAGMAIAAG A RR AA Sbjct 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGRLPGAGGGTAAGRTHGAAGRRDAA---GRS 477 Query 478 AVKFTGLGAVVRLPAMSGSIAPGVI 502 KFTGLGAVVRLPAMSGSIAPGVI Sbjct 478 GGKFTGLGAVVRLPAMSGSIAPGVI 502 >gi|183981669|ref|YP_001849960.1| oxidoreductase [Mycobacterium marinum M] gi|183174995|gb|ACC40105.1| oxidoreductase [Mycobacterium marinum M] Length=658 Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/632 (68%), Positives = 497/632 (79%), Gaps = 0/632 (0%) Query 9 GVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVG 68 G T+G+G G +GL +FG VR VH+ WL+PL GV ++ RLGGFF+ALTGAVA G Sbjct 27 GATTAGIGACGTALGLTAVFGVVRQVHIAWLVPLIGVDFDIGRLGGFFIALTGAVAVVAG 86 Query 69 CYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHAR 128 Y IGY RREHLG V + ++P+FV AMLLVPAAGSV+TFLLAWELMAI+SL+LV ++H R Sbjct 87 IYSIGYARREHLGAVALTMLPVFVTAMLLVPAAGSVSTFLLAWELMAISSLVLVATDHRR 146 Query 129 PQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTLVGFG 188 QVRSA +YAVMTQLGF +L+GL+VLAAA G+DRFA + +GVR VF+ TL+GFG Sbjct 147 AQVRSAAGYYAVMTQLGFATLLLGLMVLAAAAGTDRFADMAVPSEGVRTFVFVATLLGFG 206 Query 189 SKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLA 248 SKAGL+PLHAWLPRAHPE+PSPVSALMSAAMVNLGIYG+VR DLQLLGPGP+WWG+ LL Sbjct 207 SKAGLLPLHAWLPRAHPESPSPVSALMSAAMVNLGIYGLVRIDLQLLGPGPKWWGVTLLV 266 Query 249 VGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAA 308 +G SA+YGVLQASVA DLKRLL YST ENMGL+TL LGAATL + GA A IA AA Sbjct 267 IGAFSAMYGVLQASVATDLKRLLGYSTIENMGLVTLGLGAATLLSAAGAGPAAVIAMTAA 326 Query 309 MLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLG 368 +LH+IAHAAFKSL F+AAGSVL AT RDLD+LGGLA RM TT FFG+AALGA GLPLG Sbjct 327 LLHLIAHAAFKSLGFLAAGSVLVATQQRDLDMLGGLAHRMRCTTTFFGIAALGASGLPLG 386 Query 369 AGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRS 428 AGFVSEWLLVQSLIHA P H+ IV L TPL VG VAL TGL VAAM KAFG GFLARPRS Sbjct 387 AGFVSEWLLVQSLIHARPEHNTIVGLATPLGVGAVALTTGLGVAAMVKAFGTGFLARPRS 446 Query 429 TQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVV 488 AE AREAPA+M GMA+AA C+V+A+AP +V ++ TLPA++ T LG V+ Sbjct 447 GSAERAREAPATMLVGMAVAALGCVVIAIAPAVVTGPLQSVLDTLPASRNADLTDLGTVL 506 Query 489 RLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTA 548 RLP M GSI+P ++AAA++AA L V VLARW R RP P PLWACGA +LT RM+ T Sbjct 507 RLPGMDGSISPALLAAALVAALLVVLVLARWGSRHRPEPVTSPLWACGADELTARMECTP 566 Query 549 TSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAA 608 TSFA+PLQRVF DVLRPDT IEVTH +RY E+I YR ++DAIE R+Y PV+ A+A Sbjct 567 TSFAQPLQRVFDDVLRPDTGIEVTHLEATRYHVEQIAYRAHLSDAIEDRIYAPVLRALAW 626 Query 609 MAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 A+++RRAH GSVH YL YGALGVLIVLVVAR Sbjct 627 CAQVIRRAHNGSVHLYLGYGALGVLIVLVVAR 658 >gi|342862432|ref|ZP_08719072.1| NADH dehydrogenase subunit n [Mycobacterium colombiense CECT 3035] gi|342130103|gb|EGT83437.1| NADH dehydrogenase subunit n [Mycobacterium colombiense CECT 3035] Length=647 Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/636 (75%), Positives = 527/636 (83%), Gaps = 0/636 (0%) Query 5 PTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVA 64 P G +TS +G GV GLLGMFG R VHVGWLLPLSGV ++LD LGGFFMALTG+VA Sbjct 12 PVLAGALTSLLGALGVWAGLLGMFGKARAVHVGWLLPLSGVQLDLDPLGGFFMALTGSVA 71 Query 65 APVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLS 124 VG Y+IGY R R + +P+FVAAML VPAAGS TTFL AWE MA+ASL+LVL+ Sbjct 72 GAVGVYVIGYARHGRPSRATLTALPVFVAAMLAVPAAGSATTFLFAWESMAVASLVLVLA 131 Query 125 EHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTL 184 EH R +VR+A L YAVMTQLGF++IL GLVVLAAAGG DRFA L + G AVF LT+ Sbjct 132 EHTRLEVRAAALVYAVMTQLGFVSILAGLVVLAAAGGGDRFADLHRIPPGTATAVFALTV 191 Query 185 VGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGL 244 GFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLG+YGI RFDLQLLGPGPRWWGL Sbjct 192 AGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGVYGICRFDLQLLGPGPRWWGL 251 Query 245 ALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIA 304 L+A+G SALYGV+QASVA DLKRLLAYSTTEN+GLITLALGAATLFA +GA GPA IA Sbjct 252 TLMAIGAVSALYGVVQASVATDLKRLLAYSTTENLGLITLALGAATLFAASGAAGPAVIA 311 Query 305 AAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACG 364 AAAAMLH++AHAAFKSL F+AAGSVLAATGLRDLD LGGLARRMPATT+ FG AALGACG Sbjct 312 AAAAMLHLMAHAAFKSLGFLAAGSVLAATGLRDLDRLGGLARRMPATTMLFGTAALGACG 371 Query 365 LPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLA 424 LPLGAGF+SEWLLVQSLIH A GH ++ALTTPLAVG VAL TGL VAAM KAFGIGFLA Sbjct 372 LPLGAGFLSEWLLVQSLIHTASGHATLLALTTPLAVGAVALTTGLGVAAMVKAFGIGFLA 431 Query 425 RPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGL 484 RPRS +A AREA A+M AGM +AA AC+VLA+ P +VAP +RRA A LPAA+A +FT Sbjct 432 RPRSDEAARAREAGAAMVAGMVLAAAACVVLALVPSVVAPALRRALAALPAARAAQFTDF 491 Query 485 GAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRM 544 G +VRLP + GS+APGVIAAA+ AA+ V LA+WR R RP PA LPLWACGA DLT RM Sbjct 492 GTLVRLPGVQGSVAPGVIAAALGVAAVTVTALAQWRKRLRPEPADLPLWACGADDLTDRM 551 Query 545 QYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVG 604 QYTATSFAEPLQRVF DVLRPDTD+E+TH AESRY AERI YRT +ADAIE+R Y PV+ Sbjct 552 QYTATSFAEPLQRVFDDVLRPDTDVEITHVAESRYFAERIVYRTRIADAIEERFYAPVLQ 611 Query 605 AVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 VAA A ++RRAHTGSVH YLAYGALGVL VLV+AR Sbjct 612 LVAAAAAVVRRAHTGSVHLYLAYGALGVLAVLVIAR 647 >gi|118617492|ref|YP_905824.1| oxidoreductase [Mycobacterium ulcerans Agy99] gi|118569602|gb|ABL04353.1| oxidoreductase [Mycobacterium ulcerans Agy99] Length=636 Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/633 (67%), Positives = 493/633 (78%), Gaps = 1/633 (0%) Query 9 GVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVG 68 G T+G+G G +GL +FG VR VH+ WL+PL GV ++ RLGGF +ALTGAV G Sbjct 4 GATTAGIGACGTALGLTAVFGVVRQVHIAWLVPLIGVDFDIGRLGGFVIALTGAVTVVAG 63 Query 69 CYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHAR 128 Y IGY RREHLG V + ++P+FV AMLLVPAAGSV+TFLLAWELMAI+SL+LV ++H R Sbjct 64 IYSIGYARREHLGAVALTMLPVFVTAMLLVPAAGSVSTFLLAWELMAISSLVLVATDHRR 123 Query 129 PQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTLVGFG 188 QVRSA +YAVMTQLGF +L+GL+VLAAA G+DRFA + +GVR VF+ TL+GFG Sbjct 124 AQVRSAAGYYAVMTQLGFATLLLGLMVLAAAAGTDRFADMAVPSEGVRTFVFVATLLGFG 183 Query 189 SKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLA 248 SKAGL+PLHAWLPRAHPE+PSPVSALMSAAMVNLGIYG+VR DLQLLGPGP+WWG+ LL Sbjct 184 SKAGLLPLHAWLPRAHPESPSPVSALMSAAMVNLGIYGLVRIDLQLLGPGPKWWGVTLLV 243 Query 249 VGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAA 308 +G SA+YGVLQASVA DLKRLL YST ENMGL+TL LGAATL + GA A IA AA Sbjct 244 IGAFSAMYGVLQASVATDLKRLLGYSTIENMGLVTLGLGAATLLSAAGAGPAAVIAMTAA 303 Query 309 MLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLG 368 +LH+IAHAAFKSL F+AAGSVL AT RDLD+LGGLA RM TT FFG+AALGA GLPLG Sbjct 304 LLHLIAHAAFKSLGFLAAGSVLVATQQRDLDMLGGLAHRMRCTTTFFGIAALGASGLPLG 363 Query 369 AGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRS 428 AGFVSEWLLVQSLIHA P H+ IV L TPL VG VAL TGL VAAM KAFG GFLARPRS Sbjct 364 AGFVSEWLLVQSLIHARPEHNTIVGLATPLGVGAVALTTGLGVAAMVKAFGTGFLARPRS 423 Query 429 TQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVV 488 AE ARE PA+M GMA+AA C+V+A+AP +V ++ TLPA++ T LG V+ Sbjct 424 GSAERAREPPATMLVGMAVAALGCVVIAIAPAVVTGPLQSLLDTLPASRNADLTDLGTVL 483 Query 489 RLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTA 548 RLP M GSIAP ++AAA++AA L V VLARW R RP P PLWACGA +LT RM+ T Sbjct 484 RLPGMDGSIAPALLAAALVAALLVVLVLARWGSRHRPEPVTSPLWACGADELTARMECTP 543 Query 549 TSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVV-GAVA 607 TSFA+PLQRVF DV RPDT IEVTH +RY E+I YR ++DAIE R+Y PVV A+A Sbjct 544 TSFAQPLQRVFDDVRRPDTGIEVTHLEATRYHVEQIAYRAHLSDAIEDRVYAPVVLRALA 603 Query 608 AMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 A+++RRAH GSVH YL YGALGVLIVLVVAR Sbjct 604 WCAQVIRRAHNGSVHLYLGYGALGVLIVLVVAR 636 >gi|289552334|ref|ZP_06441544.1| oxidoreductase [Mycobacterium tuberculosis KZN 605] gi|289436966|gb|EFD19459.1| oxidoreductase [Mycobacterium tuberculosis KZN 605] Length=530 Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/405 (99%), Positives = 404/405 (99%), Gaps = 0/405 (0%) Query 236 GPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADT 295 G GPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADT Sbjct 126 GAGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADT 185 Query 296 GAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFF 355 GAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFF Sbjct 186 GAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFF 245 Query 356 GVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMT 415 GVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMT Sbjct 246 GVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMT 305 Query 416 KAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPA 475 KAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPA Sbjct 306 KAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPA 365 Query 476 AQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWAC 535 AQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWAC Sbjct 366 AQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWAC 425 Query 536 GAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIE 595 GAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIE Sbjct 426 GAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIE 485 Query 596 QRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 QRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR Sbjct 486 QRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 530 >gi|240169555|ref|ZP_04748214.1| oxidoreductase [Mycobacterium kansasii ATCC 12478] Length=623 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/622 (67%), Positives = 487/622 (79%), Gaps = 0/622 (0%) Query 19 GVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRRE 78 G+ +GL G+FG + V WL+P+ GV ++L RLG FFMALTGAVA VG Y IGY R E Sbjct 2 GIALGLNGVFGALPRARVEWLVPMIGVDLDLSRLGAFFMALTGAVAVVVGVYSIGYARLE 61 Query 79 HLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWY 138 G V + +P+FV AMLLVPAAGSVTTFLLAWELMA++SL+L+L+ H R +VR A ++Y Sbjct 62 RAGAVALTTLPVFVGAMLLVPAAGSVTTFLLAWELMALSSLVLLLTNHRRSEVRCAAMYY 121 Query 139 AVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHA 198 AVMTQLGF AIL+ L+VL AA G+DRFA + + DGVR VF+LTLVGFGSKAGL+PLHA Sbjct 122 AVMTQLGFAAILLALMVLTAAAGTDRFADMAEIPDGVRTTVFLLTLVGFGSKAGLLPLHA 181 Query 199 WLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGV 258 WLPRAHPEAPSP SALMSAAMVNLGIYG++R D+Q+LGPGPRWWG+ALLAVG +ALYGV Sbjct 182 WLPRAHPEAPSPASALMSAAMVNLGIYGLIRVDVQVLGPGPRWWGVALLAVGAVTALYGV 241 Query 259 LQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAF 318 LQASVAADLKRLL +ST ENMGL+TLALGAA L + GA A IA AA+LH++AHAAF Sbjct 242 LQASVAADLKRLLGFSTIENMGLVTLALGAAMLLSAAGAAAAAMIAMTAALLHLVAHAAF 301 Query 319 KSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLV 378 KSL F+AAGSVL TGLRDLD LGGLAR+MP T VFFG+AALGA GLPLGAGFVSEWLLV Sbjct 302 KSLGFLAAGSVLLTTGLRDLDKLGGLARKMPYTAVFFGIAALGASGLPLGAGFVSEWLLV 361 Query 379 QSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAP 438 QSLIHA P H+ +V L TPL VG VAL TGL VAAM KAFG GFLARPRS A AREAP Sbjct 362 QSLIHARPEHNTVVGLVTPLGVGAVALTTGLGVAAMVKAFGTGFLARPRSEAAAHAREAP 421 Query 439 ASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIA 498 ASM AGMA+AA C+V+ V P ++A ++ TLP+++ TGLG ++RLP + SIA Sbjct 422 ASMLAGMAVAAVGCVVVGVLPFIIAETLQSVLDTLPSSRHADLTGLGPMLRLPGIDASIA 481 Query 499 PGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRV 558 PG +A A++ A L V LARW R RP R PLWACGA +L+ RM+YTATSFA+PLQRV Sbjct 482 PGPLAVALVLAVLVVLALARWGSRHRPDSVRSPLWACGADELSSRMEYTATSFAQPLQRV 541 Query 559 FGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHT 618 F DVLRPDT IEVTH +RY E+I YR +ADAIE +Y PV+ AVA A+ +R AH Sbjct 542 FDDVLRPDTGIEVTHLEHTRYHVEKIAYRAELADAIEDHVYMPVLRAVAWSAQAIRCAHN 601 Query 619 GSVHRYLAYGALGVLIVLVVAR 640 GSVH YL YGALGVLI+LVVAR Sbjct 602 GSVHLYLGYGALGVLIILVVAR 623 >gi|333991243|ref|YP_004523857.1| oxidoreductase [Mycobacterium sp. JDM601] gi|333487211|gb|AEF36603.1| oxidoreductase [Mycobacterium sp. JDM601] Length=648 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/614 (69%), Positives = 482/614 (79%), Gaps = 3/614 (0%) Query 27 MFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMA 86 MFG + V +GWLLPL GV + ++ LGGFFM LTGAVA G Y IGY R E G VP+ Sbjct 38 MFGALPTVRIGWLLPLLGVQLRVEPLGGFFMVLTGAVAVAAGLYWIGYSRHEGFGAVPLT 97 Query 87 VVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGF 146 +P+FV +L VPAAGSVTTFL AWELMA+ SL+LVL++ R +VRSA L YAVMTQLGF Sbjct 98 ALPVFVVTLLAVPAAGSVTTFLFAWELMALTSLVLVLTDQQRSEVRSAALIYAVMTQLGF 157 Query 147 IAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPE 206 + +L+G+V+LAA D FA +GAV DGVR VF+LTL+GFGSKAGL+PLHAWLPRAHPE Sbjct 158 LTLLLGMVILAATT-DDVFARIGAVPDGVRNTVFVLTLIGFGSKAGLLPLHAWLPRAHPE 216 Query 207 APSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAAD 266 APSPVSAL+SAAMVNLG+YGI+R D+QLLGPGPRWW L LLAVGG SA+YGVLQASVA D Sbjct 217 APSPVSALLSAAMVNLGVYGIIRIDMQLLGPGPRWWALTLLAVGGVSAVYGVLQASVATD 276 Query 267 LKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAA 326 LKRLLAYSTTEN+GLITL LGAA L A G+ A++A AA+LH+IAH+AFKSL F AA Sbjct 277 LKRLLAYSTTENIGLITLGLGAAMLLAGAGSQPAAAVALTAALLHLIAHSAFKSLGFFAA 336 Query 327 GSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAP 386 GSVLAATGLRDLD LGGL RRMP TT FGVAALGA GLPLGAGFVSEWLL+QSLI+A P Sbjct 337 GSVLAATGLRDLDRLGGLVRRMPLTTALFGVAALGAAGLPLGAGFVSEWLLIQSLINARP 396 Query 387 GHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMA 446 G D +AL TPLAV VAL GL VAAM KAFG GFLARPRS A AARE+P +M A MA Sbjct 397 GDDVTIALVTPLAVAAVALTAGLGVAAMVKAFGFGFLARPRSDAAAAARESPETMIAAMA 456 Query 447 IAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAV 506 + A AC+VLAV P VAPM+ R AT+P LG VRLP + S+APG++AAA+ Sbjct 457 LPAAACVVLAVVPGAVAPMLNRVIATVPVFG--DSPALGVFVRLPGLDASMAPGLLAAAL 514 Query 507 LAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPD 566 AA L VA+ +RWR RRRPAPA +PLWACGA +LT RMQYTATSFA+PLQ+VF DVLR D Sbjct 515 AAAVLLVAIGSRWRSRRRPAPATVPLWACGADELTPRMQYTATSFAQPLQQVFDDVLRFD 574 Query 567 TDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLA 626 T +EV+ A S Y+ +RI YR +AD IE R YTPV AV A A+L+RRAHTGSVH YLA Sbjct 575 TGVEVSGQAPSTYVVDRIAYRARIADVIEDRWYTPVTRAVGAAAQLVRRAHTGSVHLYLA 634 Query 627 YGALGVLIVLVVAR 640 YGA+GVLI L+VAR Sbjct 635 YGAIGVLIALLVAR 648 >gi|317126125|ref|YP_004100237.1| NADH/Ubiquinone/plastoquinone (complex I) [Intrasporangium calvum DSM 43043] gi|315590213|gb|ADU49510.1| NADH/Ubiquinone/plastoquinone (complex I) [Intrasporangium calvum DSM 43043] Length=696 Score = 576 bits (1485), Expect = 4e-162, Method: Compositional matrix adjust. Identities = 358/662 (55%), Positives = 437/662 (67%), Gaps = 29/662 (4%) Query 6 TAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAA 65 +A G+VTS VG GV G + + G + V +LLPLS + +++D L G FM + G VA Sbjct 31 SASGLVTSLVGAGGVLAGSVALMGTQYTMSVDFLLPLSRMVLDIDGLSGLFMTMIGGVAV 90 Query 66 PVGCYLIGYVRREHLG--------------------RVPMAVVPLFVAAMLLVPAAGSVT 105 VG Y +GYV + HLG R A +PLFVAAMLLVPAAG++T Sbjct 91 VVGVYRMGYVHQTHLGSASDDDRHREVVSDTTGIDSRWATACLPLFVAAMLLVPAAGNIT 150 Query 106 TFLLAWELMAIASLILVLSEH-ARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDR 164 TFL+AWELMA+ASL+LVL+EH R +VR AG+WYA MT GF ILVGLV+LAA G++ Sbjct 151 TFLVAWELMALASLVLVLAEHRERVEVRQAGVWYAAMTHAGFAVILVGLVLLAAWSGTET 210 Query 165 FAGLGAVCDGV----RAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMV 220 AG+ G+ R+AVF+LTL GF SKAGLVPLH WLPRAHPEAPS VSALMSAAMV Sbjct 211 LAGIRQTAPGLSEPARSAVFLLTLAGFASKAGLVPLHVWLPRAHPEAPSYVSALMSAAMV 270 Query 221 NLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMG 280 NLG+YGIVR LLG GP WW L +LA+G SALYGVLQA VA DLKRLLAYSTTEN+G Sbjct 271 NLGLYGIVRVWFDLLGGGPSWWALMVLALGVVSALYGVLQAVVANDLKRLLAYSTTENLG 330 Query 281 LITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDL 340 L+ + +GAA L A G + AA++H + HA FKSL F+ AG+VL ATGLRDLD Sbjct 331 LVCIGVGAAGLVATNGDSPLVGLLLLAALMHAVNHAGFKSLLFLGAGAVLRATGLRDLDR 390 Query 341 LGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGH---DPIVALTTP 397 +GGL R MP T + G AL A GLP G GFVSEWLL+Q LIH+ P + ++A+T P Sbjct 391 MGGLVRLMPITALLTGAGALAASGLPPGNGFVSEWLLLQGLIHSLPPSGTPNLLLAVTMP 450 Query 398 LAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAV 457 LAVG VAL GL VA KA+GIGFLARPRST+A +A E ++ GM +AA C VLA+ Sbjct 451 LAVGAVALTAGLGVATFVKAWGIGFLARPRSTEAASAAEGGVALSVGMGMAAAVCAVLAL 510 Query 458 APLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLA 517 P V RA A LP A A + L + GSI+P +IA AV A + V +A Sbjct 511 WPAAAIQAVSRAIAALPGIGADPPVRSDAYLTLSGVRGSISPVLIAVAV-ALGVTVVAVA 569 Query 518 RWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAES 577 R A R +W CG L+ RMQYTATS+AEPL RVF DVLRP+ D++VTH AES Sbjct 570 LRVLAARRARRRSLVWGCGGTRLSPRMQYTATSYAEPLIRVFDDVLRPEQDVDVTHYAES 629 Query 578 RYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLV 637 RY+ E +TYR V D +E LY PV+ A A+L RR GS+HRYLAYG +GV++VL+ Sbjct 630 RYLVESVTYRQRVGDRVEALLYPPVLAAANRWAQLARRVQNGSLHRYLAYGLVGVIVVLI 689 Query 638 VA 639 A Sbjct 690 SA 691 >gi|258653155|ref|YP_003202311.1| NADH/Ubiquinone/plastoquinone (complex I) [Nakamurella multipartita DSM 44233] gi|258556380|gb|ACV79322.1| NADH/Ubiquinone/plastoquinone (complex I) [Nakamurella multipartita DSM 44233] Length=674 Score = 533 bits (1373), Expect = 3e-149, Method: Compositional matrix adjust. Identities = 341/613 (56%), Positives = 414/613 (68%), Gaps = 14/613 (2%) Query 39 LLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLG-RVPMAVVPLFVAAMLL 97 LLPL G+ +D LGG F+A+TG V+A VG Y IGY R L R AV+PLFV AM+L Sbjct 65 LLPLFGLLFTVDPLGGVFLAVTGGVSAAVGLYGIGYCREHGLDARGVQAVLPLFVLAMML 124 Query 98 VPAAGSVTTFLLAWELMAIASLILVLSEHAR-PQVRSAGLWYAVMTQLGFIAILVGLVVL 156 VP A SV T LL WELMA+ SL+LV++EH R P+V SAG WYAVMT LG +AIL+GL+V Sbjct 125 VPLAASVGTLLLVWELMALTSLLLVVAEHRRRPEVASAGRWYAVMTHLGLVAILIGLLVF 184 Query 157 AAAGGSDRFAGLGAVCDGVRAAV----FMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVS 212 AA FA L A G+ AV F+ T +GFGSKAG+VPLHAWLPRAHPEAPS VS Sbjct 185 AAHAADGSFAALRAAAPGLSPAVAGLVFVATGIGFGSKAGIVPLHAWLPRAHPEAPSNVS 244 Query 213 ALMSAAMVNLGIYGIVRFDLQLL-GPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLL 271 ALMSAAMVNLGIYGIVR LL G WW L +L +G SA+YG+LQA+V +LKRLL Sbjct 245 ALMSAAMVNLGIYGIVRVGFDLLAGADTGWWWLLVLGLGAGSAIYGILQAAVGTNLKRLL 304 Query 272 AYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLA 331 STTENMGL+ + +GAA F TG A +A AAA+LH++ HAAFK++ F AAG+V+A Sbjct 305 GNSTTENMGLVLIGVGAAGFFGTTGNPPLAGLALAAALLHLVNHAAFKTVLFQAAGAVVA 364 Query 332 ATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPI 391 ATG RDLD LGGL RMPATT FG+ AL A LP GA FVSEWLL+Q+LIH P Sbjct 365 ATGRRDLDDLGGLNTRMPATTTAFGIGALAASALPPGAAFVSEWLLLQALIHGLPAAGVA 424 Query 392 VALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGA 451 A+ PLAV VAL GL+VA KAFGIGFLA+PR+ +AE A E PA+M AGM +AA A Sbjct 425 GAIVLPLAVAAVALTAGLAVATFVKAFGIGFLAKPRTVEAERATERPATMLAGMGLAATA 484 Query 452 CLVLAVAPLLVAPMVRR-AAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAA 510 C+ LA+AP LV P + A AT+ A V+ GL + L ++GS++P ++ L Sbjct 485 CVALALAPTLVLPTLGAVAGATVGAPDPVQVQGL--TIELVGVAGSLSP-LMLTLALLLG 541 Query 511 LAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIE 570 + VA+ R LW CG L+ RM+YTATSFAEPLQRVF DV+R + DI+ Sbjct 542 MVVALAGVRALATRRQARAARLWDCGGGPLSARMEYTATSFAEPLQRVFDDVVRAEHDID 601 Query 571 VTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYG-- 628 VTH E+RY+ ++I YR V D IE+RLY PV+ AVAA RR TGSVHR L YG Sbjct 602 VTHHDEARYLVQQIEYRRRVPDRIERRLYQPVLQAVAAWGRAGRRLSTGSVHRSLGYGFA 661 Query 629 -ALGVLIVLVVAR 640 G+LI+LVV R Sbjct 662 TLCGLLILLVVTR 674 >gi|331694629|ref|YP_004330868.1| NADH dehydrogenase (quinone) [Pseudonocardia dioxanivorans CB1190] gi|326949318|gb|AEA23015.1| NADH dehydrogenase (quinone) [Pseudonocardia dioxanivorans CB1190] Length=671 Score = 514 bits (1323), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 336/644 (53%), Positives = 412/644 (64%), Gaps = 22/644 (3%) Query 13 SGVGVAGVGVGLLGMF-GPVRVVHVGW------LLPLSGVHIELDRLGGFFMALTGAVAA 65 +GVGV V GLLG G V W LLPL G+ +++D L G F+A+ G VA Sbjct 34 TGVGV--VAAGLLGTVAGVVATTGTTWSVARPDLLPLIGLELDVDSLSGVFLAVGGVVAI 91 Query 66 PVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSE 125 G Y IG R G A +P FVA++LLVPAAGSV T L WELMA+ SL+LV++E Sbjct 92 AAGTYAIGAARHGLDGPGVQAALPAFVASLLLVPAAGSVGTLLYCWELMALTSLVLVVAE 151 Query 126 H-ARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAV----F 180 H RP V SAGLWYAVMT GF+AI+VGL+V A A G FA + A G+ A F Sbjct 152 HRERPAVASAGLWYAVMTHAGFVAIMVGLLVAAGAAGDGSFAAIRAAASGLSPAAASPAF 211 Query 181 MLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPR 240 + L GFGSKAG+VPLH WLPRAHPEAPS VSALMSAAMVNLG+YGIVR + LLG GP Sbjct 212 LACLAGFGSKAGMVPLHPWLPRAHPEAPSHVSALMSAAMVNLGVYGIVRVGVDLLGGGPS 271 Query 241 WWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGP 300 WW + +L +G SA+YG+LQA+V +DLKRLL YSTTENMGL+ + +GA +FA G+ Sbjct 272 WWWVTVLVLGAVSAVYGILQAAVGSDLKRLLGYSTTENMGLVLVGVGACGMFAAAGSRAL 331 Query 301 ASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAAL 360 A +A AA+LH++ HAAFK++ F++AGSVL ATG RDLD LGGL RMP TT FGV AL Sbjct 332 AGLALTAALLHVMTHAAFKTVLFLSAGSVLHATGTRDLDALGGLRSRMPVTTAAFGVGAL 391 Query 361 GACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGI 420 A LP GA FVSEWLL+Q+LIH P + A+ PL V +AL GL+VA KAFGI Sbjct 392 AASALPPGAAFVSEWLLLQALIHGLPAPGVVPAVVLPLGVAAIALTAGLAVATFVKAFGI 451 Query 421 GFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAP-MVRRAAATLPAAQAV 479 GFL RPR A AA E+ + M +A AC+ AV P LV P + A + A AV Sbjct 452 GFLGRPRGAGAAAAAESGPAALTAMVLAGLACVAAAVCPTLVLPTLAEVAGGVVHAVPAV 511 Query 480 KFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAAD 539 T + L +SG ++P V+ L AA A V A RR R LW CGA Sbjct 512 SGT---VAIELVGVSGVLSP-VLLVVTLIAAAAAVVGALRLLARRRDRRRARLWDCGAGP 567 Query 540 LTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLY 599 L+ RM+YTATSFAEPLQRVF DVL P+ D++V+H ESRY+ ++YR + D +E+RLY Sbjct 568 LSARMEYTATSFAEPLQRVFDDVLAPEQDVDVSHHEESRYLVAAVSYRRELPDRVERRLY 627 Query 600 TPVVGAVAAMAELLRRAHTGSVHRYLAYGAL---GVLIVLVVAR 640 TP++ A A R TGSVHRYL YG + G+L LVV R Sbjct 628 TPLLDAATAWGRAGRGLATGSVHRYLGYGFVTLCGLLAWLVVTR 671 >gi|269128892|ref|YP_003302262.1| NADH/Ubiquinone/plastoquinone (complex I) [Thermomonospora curvata DSM 43183] gi|268313850|gb|ACZ00225.1| NADH/Ubiquinone/plastoquinone (complex I) [Thermomonospora curvata DSM 43183] Length=662 Score = 505 bits (1301), Expect = 9e-141, Method: Compositional matrix adjust. Identities = 337/607 (56%), Positives = 401/607 (67%), Gaps = 18/607 (2%) Query 39 LLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLV 98 LLPL+GV +ELD LGG F A+TG V Y IGY R H R +VPLF AA+LLV Sbjct 62 LLPLAGVRLELDALGGLFTAVTGGVITAAAIYSIGYAR--HAPRTAQILVPLFAAALLLV 119 Query 99 PAAGSVTTFLLAWELMAIASLILVLSEH-ARPQVRSAGLWYAVMTQLGFIAILVGLVVLA 157 PAA SV+TFLL WELMAIASL+LVL++H ARP VRSAG+WYAV+T LG +AIL GLV A Sbjct 120 PAAASVSTFLLLWELMAIASLLLVLADHRARPAVRSAGVWYAVLTHLGLVAILGGLVAFA 179 Query 158 AAGGSDRFAGL------GAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPV 211 AA G + FA L GA+ GV F+ T GF SKAG+VPLH WLPRAHPEAPS V Sbjct 180 AAAGGESFAELRRADAGGALAIGV----FLATFAGFASKAGIVPLHVWLPRAHPEAPSHV 235 Query 212 SALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLL 271 SALMSAAMVN+GIYGIVR L LLG GPRWW L +LA G SAL+G+LQA+VA+DLKRLL Sbjct 236 SALMSAAMVNMGIYGIVRVGLDLLGGGPRWWWLVVLAAGALSALHGILQAAVASDLKRLL 295 Query 272 AYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLA 331 YSTTENMGL+ + +GAA F +G A++A AAA+LH+I HAAFK+L F+AAGSVL Sbjct 296 GYSTTENMGLVLIGVGAAGFFEASGERALAALALAAALLHVINHAAFKTLLFLAAGSVLH 355 Query 332 ATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPI 391 TG RDLD LGGL RMP TT+ F + AL A LP G FVSEWL++QSLI + P Sbjct 356 GTGTRDLDALGGLRERMPLTTIVFALGALCASALPPGNAFVSEWLMLQSLIRSLPDGGVS 415 Query 392 VALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGA 451 A+ PLAV VAL GLS A KA G GFLARPRS +AE A EAP SM AGMA+A A Sbjct 416 AAVVMPLAVAAVALTAGLSAATFVKALGTGFLARPRSAEAERAHEAPPSMLAGMALAGAA 475 Query 452 CLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAAL 511 C+ LA+ P LV P V + + G L A + S++P V+ AA LA + Sbjct 476 CVALALGPTLVLPGVAEVTGQVLPGRGPATDG----AYLRAAASSLSP-VLIAAALAVTV 530 Query 512 AVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEV 571 A + R A LW CGA +T RM+YTATSFAEPLQRVF DVL P++D+EV Sbjct 531 AALLAVLRALALRRARRAARLWDCGAGPMTARMEYTATSFAEPLQRVFDDVLAPESDVEV 590 Query 572 THTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALG 631 TH ES Y+ R+ ++ AV D IE RLY P + + R GSVHRY+ YG Sbjct 591 THVKESAYLVNRVRFQAAVPDRIEHRLYAPAIALADRVGRASRELANGSVHRYVGYGFAA 650 Query 632 VLIVLVV 638 + L+V Sbjct 651 FAVTLIV 657 >gi|296166650|ref|ZP_06849076.1| possible oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897985|gb|EFG77565.1| possible oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=336 Score = 441 bits (1134), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 250/335 (75%), Positives = 272/335 (82%), Gaps = 0/335 (0%) Query 306 AAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGL 365 AAA+LH++AHAAFKSL F+AAGSVLAATGLRDLD LGGLARRMP TT FGVAALGA GL Sbjct 2 AAALLHLVAHAAFKSLGFLAAGSVLAATGLRDLDRLGGLARRMPVTTTLFGVAALGASGL 61 Query 366 PLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLAR 425 PLGAGFVSEWLLVQSLIH A H ++ALTTPLAVG VAL GL VAAM KAFGIGFLAR Sbjct 62 PLGAGFVSEWLLVQSLIHTAREHSAVLALTTPLAVGAVALTAGLGVAAMVKAFGIGFLAR 121 Query 426 PRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLG 485 PRS A AREAP +M AGMAIAA ACL +AVAP +++P +R A A LPAA+ V FT LG Sbjct 122 PRSGPAAHAREAPRTMLAGMAIAAAACLTVAVAPAVLSPALRSAVAALPAARTVPFTELG 181 Query 486 AVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQ 545 A VRLP + GSIAPG IAA V+ A L A+L RWR RPAPA PLWACGA DLT RMQ Sbjct 182 AAVRLPGLQGSIAPGAIAACVVVATLIAALLTRWRRSGRPAPAAAPLWACGADDLTERMQ 241 Query 546 YTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGA 605 YTATSFAEPLQRVF DVLRPDTDIEVTH ESRY+A+RI YRT +ADAIE+R Y PV+ Sbjct 242 YTATSFAEPLQRVFDDVLRPDTDIEVTHPVESRYLADRIVYRTRIADAIEERCYPPVIRL 301 Query 606 VAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 V A A L+RRAHTGSVH YLAYGALGVLIVLV AR Sbjct 302 VTAAAALVRRAHTGSVHLYLAYGALGVLIVLVAAR 336 >gi|119718688|ref|YP_925653.1| NADH dehydrogenase (quinone) [Nocardioides sp. JS614] gi|119539349|gb|ABL83966.1| NADH dehydrogenase (quinone) [Nocardioides sp. JS614] Length=664 Score = 437 bits (1124), Expect = 3e-120, Method: Compositional matrix adjust. Identities = 294/593 (50%), Positives = 372/593 (63%), Gaps = 13/593 (2%) Query 40 LPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVP 99 LPL+GV ++ LGGF M + GAV A + IGY R A +P F+ +M LVP Sbjct 66 LPLTGVALDPTPLGGFVMLVAGAVGAVAAVFAIGYAHGPAASRTSWAALPAFLVSMQLVP 125 Query 100 AAGSVTTFLLAWELMAIASLILVLSEH-ARPQVRSAGLWYAVMTQLGFIAILVGLVVLAA 158 AA +FLL WELMA+AS +LVL+EH R +VRSA LWYA MT L F +L+G VL Sbjct 126 AAADAVSFLLMWELMALASAVLVLTEHRDREEVRSAALWYAAMTHLSFGLLLLGFTVLVE 185 Query 159 AGGSDRFAGLGAVC-DGVRAAV-FMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMS 216 GG F + AV ++A++ F+L + GF +KAG VP H WLPRAHP APS VSA+MS Sbjct 186 EGGGTGFDAMSAVDPTSLQASIAFVLLIAGFATKAGAVPFHVWLPRAHPAAPSHVSAVMS 245 Query 217 AAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTT 276 AAMV +G+YG + L+LL GP WWG ++A+G SA YG+LQASV +DLKRLLAYSTT Sbjct 246 AAMVKMGVYGALLVALRLLPGGPTWWGFVVVALGAVSATYGILQASVTSDLKRLLAYSTT 305 Query 277 ENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLR 336 EN+GL+ LALG A L PA A A +L + +HAAFK+ F+ AG+VL ATG R Sbjct 306 ENVGLMFLALGTAMLLRSHDVSAPADAALVACLLLLTSHAAFKTALFLGAGAVLHATGER 365 Query 337 DLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTT 396 DLD +GGLA RMP T V F + ALGA LPL GFV+EW L+QSLIH A D +VA Sbjct 366 DLDRMGGLAARMPVTNVAFALGALGAAALPLSVGFVAEWTLLQSLIHGARPDDRLVAAMM 425 Query 397 PLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLA 456 P++V VVAL GL++ KA+GI FLARPRS+ A AREA MR M +AA A + L Sbjct 426 PISVAVVALTAGLALLTFVKAYGIAFLARPRSSGAAEAREATPGMRTAMLVAAVAVVGLG 485 Query 457 VAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALA--VA 514 + P +A + RAA V G V LP ++G + V A +VLA LA V Sbjct 486 LVPGPLADLAGRAA-------GVADPGSEVAVDLPGIAGGVLDPV-AVSVLAVLLAAPVG 537 Query 515 VLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHT 574 V+A RRR W CG A ++ RMQYTATS+AEPL RVF D +RP+ D+ VTH Sbjct 538 VVALAAARRRRRRRVDLAWGCGGARVSPRMQYTATSYAEPLARVFDDAVRPERDVVVTHY 597 Query 575 AESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAY 627 +ESRY+ ER+ +R + + +E RLY PV+ + RR GS+HRYL Y Sbjct 598 SESRYLVERVQFRQRLDEVVETRLYQPVLRVGDRVGAAARRLQNGSIHRYLGY 650 >gi|258593560|emb|CBE69901.1| conserved membrane protein of unknown function [NC10 bacterium 'Dutch sediment'] Length=677 Score = 393 bits (1009), Expect = 5e-107, Method: Compositional matrix adjust. Identities = 247/603 (41%), Positives = 339/603 (57%), Gaps = 23/603 (3%) Query 39 LLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPL----FVAA 94 LLP+ G+ + +DRL FF+ + A P Y I Y R + G+ +A + L F+A Sbjct 71 LLPVGGLSLGMDRLSAFFVLVIAVAAIPSTVYAITYTR-AYEGKSSLAGMGLGFNAFLAG 129 Query 95 MLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLV 154 M+LV A +V TFL+ WE M++AS LV++E + AG Y V T GF +L+G + Sbjct 130 MVLVVLARNVLTFLVMWEAMSLASYFLVMTEAEHRDTQDAGWLYLVTTHAGFACLLIGFL 189 Query 155 VLAAAGGSD-----RFAGLGAVCDG-VRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAP 208 V+A G+D + A G +R AVF+L +GFG+KAG+VPLH WLP+AHP AP Sbjct 190 VMAH--GTDTMNLSEWRAASATLSGPMRHAVFVLLALGFGAKAGVVPLHIWLPKAHPAAP 247 Query 209 SPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLK 268 S VSA+MS M+ LGIYG++R LG G WWG A+L V SA+ GVL A V +DLK Sbjct 248 SHVSAMMSGVMIKLGIYGLIRIGFDWLGVGASWWGGAILVVAAVSAVLGVLYALVESDLK 307 Query 269 RLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGS 328 LLAYS+ EN+G+I L +GA LF AS+A A++ H + HA FK L FM AG+ Sbjct 308 CLLAYSSVENIGIILLGVGAGMLFQSYHLDTLASLALVASLYHTVNHAIFKPLLFMGAGA 367 Query 329 VLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGH 388 V+ ATG R+++ +GGL +RMP T +F V ++ LP GF+SEWL+ QSL+ + Sbjct 368 VVHATGTRNIEEMGGLIKRMPQTAAYFLVGSVAIAALPPFNGFISEWLIFQSLLLSFQIS 427 Query 389 DPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIA 448 L L++ +AL +GL+ A KAFGI FLA PRS +AE AREAP MR M I+ Sbjct 428 ATGTNLLFALSIAALALTSGLAAACFVKAFGITFLALPRSERAEQAREAPRMMRGAMGIS 487 Query 449 AGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAP----GVIAA 504 A ACL L VAP+ + ++ A L AQA +V A + ++P + Sbjct 488 AVACLALGVAPVGIVRLLNTTVADLTGAQADVHFNWNVIVANDAFA-VVSPLWIAVALIL 546 Query 505 AVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLR 564 + + + VL RR W CG A T R +YTAT+FA P +RVFG + R Sbjct 547 LLALIPMVLRVLGATAARR-----AYETWGCGRALQTSRFEYTATAFANPFKRVFGLLYR 601 Query 565 PDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRY 624 P ++++ ESR E I YR E+ LY P+ V A+ R +G+VH Y Sbjct 602 PVKELDIQFHPESRMFVETIAYRNETRSIFEEALYGPMSRLVQRGAQRARIVQSGNVHLY 661 Query 625 LAY 627 L Y Sbjct 662 LLY 664 >gi|296166651|ref|ZP_06849077.1| thiamine biosynthesis protein ThiC [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897986|gb|EFG77566.1| thiamine biosynthesis protein ThiC [Mycobacterium parascrofulaceum ATCC BAA-614] Length=353 Score = 383 bits (984), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 198/261 (76%), Positives = 221/261 (85%), Gaps = 0/261 (0%) Query 27 MFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMA 86 MFG R V +GWLLPLSGV + LD L GFFMA+TGAVA VG Y IGY RRE LG +A Sbjct 45 MFGRAREVRIGWLLPLSGVRLGLDPLAGFFMAITGAVAVAVGLYAIGYARRERLGPATLA 104 Query 87 VVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGF 146 V+P VAAML+VPAA SVTTFLLAWE MA+ASL+LVL+ H +P+VRSA L YAVMTQLGF Sbjct 105 VLPAVVAAMLVVPAAASVTTFLLAWESMAVASLVLVLTHHTQPRVRSAALVYAVMTQLGF 164 Query 147 IAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPE 206 +AILVGL+V++AAGG+DRF+ L + G R AVF+LTL GFGSKAGLVPLHAWLPRAHPE Sbjct 165 VAILVGLMVMSAAGGADRFSDLHQIPQGARTAVFLLTLAGFGSKAGLVPLHAWLPRAHPE 224 Query 207 APSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAAD 266 APSPVSALMSAAMVNLG+YGI R DLQLLGPGPRWWGLAL+ GG SALYGV+QASVA D Sbjct 225 APSPVSALMSAAMVNLGVYGICRVDLQLLGPGPRWWGLALMVAGGVSALYGVVQASVATD 284 Query 267 LKRLLAYSTTENMGLITLALG 287 LKRLLAYSTTEN+GLITLA G Sbjct 285 LKRLLAYSTTENLGLITLARG 305 >gi|306778910|ref|ZP_07417247.1| oxidoreductase [Mycobacterium tuberculosis SUMu002] gi|308328088|gb|EFP16939.1| oxidoreductase [Mycobacterium tuberculosis SUMu002] Length=197 Score = 377 bits (969), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 197/197 (100%), Positives = 197/197 (100%), Gaps = 0/197 (0%) Query 444 GMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIA 503 GMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIA Sbjct 1 GMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIA 60 Query 504 AAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVL 563 AAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVL Sbjct 61 AAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVL 120 Query 564 RPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHR 623 RPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHR Sbjct 121 RPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHR 180 Query 624 YLAYGALGVLIVLVVAR 640 YLAYGALGVLIVLVVAR Sbjct 181 YLAYGALGVLIVLVVAR 197 >gi|147919456|ref|YP_686804.1| hydrogenase, membrane subunit 4-like protein (HycC-like) [uncultured methanogenic archaeon RC-I] gi|110622200|emb|CAJ37478.1| hydrogenase, membrane subunit 4-like protein (HycC-like) [uncultured methanogenic archaeon RC-I] Length=681 Score = 372 bits (954), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 237/613 (39%), Positives = 351/613 (58%), Gaps = 21/613 (3%) Query 41 PLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPM----AVVPLFVAAML 96 P + +D L FF+ V V Y IGY RE++G+ + ++ LF+ +M+ Sbjct 77 PFGEMSFTVDPLSAFFILAISIVGFAVSVYSIGY-SREYVGKYSIGLLGSIFNLFLLSMI 135 Query 97 LVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVL 156 LV AG+ FL+ WE+M+I S +LV+ E+ + + SAG Y VMT LG I VG ++L Sbjct 136 LVVTAGNAIQFLIVWEVMSILSYLLVVYENRKKEAVSAGFLYIVMTHLGTAFITVGFLLL 195 Query 157 AAAGGSDRFAGL----GAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVS 212 A GS FA A+ + V++ F+L L+GFG+KAG++PLH WLP AHP APS VS Sbjct 196 ATTTGSFDFASFKGAGAALPELVKSLAFVLFLIGFGTKAGIMPLHVWLPYAHPAAPSNVS 255 Query 213 ALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLA 272 ALMS MV IY ++R + LG WWGL +L V SA+ GVL A DLKRLLA Sbjct 256 ALMSGVMVKTAIYMLIRCIFEFLGVADTWWGLLVLLVASLSAVLGVLFALNETDLKRLLA 315 Query 273 YSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAA 332 YST EN+G+I +A+GA+ +F G A++A AA+ H H+ FK+L FM AGSVL A Sbjct 316 YSTVENVGIILIAIGASMVFVSYGLKELAALALIAALFHAFNHSLFKALLFMGAGSVLYA 375 Query 333 TGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIV 392 ++++L+GGLA+RMP T VFF V AL +P GFVSEWL+ QSL+ + + IV Sbjct 376 VHTKNIELMGGLAKRMPWTGVFFFVGALSISAIPPLNGFVSEWLIFQSLLLSFNFPEMIV 435 Query 393 ALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGAC 452 + P+ +G++AL L+ A +A+GI FLA PR+ A A++ P +M AGMAI A C Sbjct 436 KILIPVTIGMLALTGALAAACFVRAYGIAFLAAPRTEHAAEAKDVPVTMLAGMAILAVLC 495 Query 453 LVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVR--LPAMSGSIAPGVIAAAVLAAA 510 +V + + + P + AT+ G V+ + + SG ++P I A ++ Sbjct 496 VVTGLMSVFIVPAIDSVTATIIGTSVASKMTYGIVMEPVVTSFSG-MSPLAIGALMIVLL 554 Query 511 LAVAVLARWRFRRRPAPARLPL---WACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDT 567 AV ++ R+ RR ++ L W CG L+ R +YT T++A+ + +F + RP Sbjct 555 PAVYLITRYYGGRR----KIVLGDTWDCG-TRLSHRNEYTGTAYAKSINMIFSAIYRPSK 609 Query 568 DIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAY 627 ++ TA S Y+++ +TY E+ LY P+ G V +A L TGS+ YL Y Sbjct 610 ELVARPTA-SPYISKELTYADHTEPLFEKYLYNPLAGFVVKLARRLSFIQTGSIQAYLTY 668 Query 628 GALGVLIVLVVAR 640 + ++++L++ R Sbjct 669 IFITLVLLLIIFR 681 >gi|302039531|ref|YP_003799853.1| formate hydrogenlyase, membrane subunit [Candidatus Nitrospira defluvii] gi|300607595|emb|CBK43928.1| Formate hydrogenlyase, membrane subunit [Candidatus Nitrospira defluvii] Length=675 Score = 369 bits (947), Expect = 9e-100, Method: Compositional matrix adjust. Identities = 239/603 (40%), Positives = 336/603 (56%), Gaps = 21/603 (3%) Query 40 LPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMA----VVPLFVAAM 95 +P V I LD L FF+ V + +GY+ E GR +A ++ F+ AM Sbjct 66 IPFLSVAIRLDPLASFFVLTISVVGLAASIFALGYLA-ELYGRASIAAMGSLLNGFLLAM 124 Query 96 LLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVV 155 LV A + FL+ WE+M++ S +LV++EH +P VR AGL+Y +MT +G I++ ++ Sbjct 125 TLVVLADNGFFFLILWEVMSLLSYVLVVTEHEKPGVREAGLFYLIMTHVGTAFIILTFLI 184 Query 156 LAAAGGSDRFAGL----GAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPV 211 GS F + +G+R+ F L+GFG+KAG+VPLH WLP AHP APS V Sbjct 185 FFQETGSFSFEAFRHPDQQLPEGLRSIAFFTALIGFGAKAGIVPLHVWLPYAHPAAPSHV 244 Query 212 SALMSAAMVNLGIYGIVRFDLQLLG-PGPRWWGLALLAVGGTSALYGVLQASVAADLKRL 270 SALMS M+ IYG++R +G P WWG LL G SAL GV+ A + DLK L Sbjct 245 SALMSGVMIKTAIYGLIRVYFDFMGGEFPWWWGFTLLVAGTVSALLGVMYALMEHDLKSL 304 Query 271 LAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVL 330 LA+ + EN+G+I L +GA +F G + A++ A + H I HAAFK+L F+ AG+V Sbjct 305 LAFHSVENIGIILLGMGAGMIFHTYGLHELAALGLLAGLYHTINHAAFKALLFLGAGAVQ 364 Query 331 AATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDP 390 AT R ++ GGL RRMP T FF V A+ LP GFVSEWL+ QSL + Sbjct 365 FATHTRQIEEYGGLLRRMPWTGAFFLVGAVSIAALPPTNGFVSEWLVFQSLFLSFQLPTL 424 Query 391 IVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAG 450 + L P+A ++AL L++A KAFG+ FLA+PRS+ A A E P SMR GM AG Sbjct 425 FLKLMLPIAAAMLALTGALALACFAKAFGMSFLAQPRSSHARHATEVPRSMRVGMGFLAG 484 Query 451 ACLVLAVAPLLVAPMVRRAAATLP-AAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAA 509 C+VL +AP+LV P++ R A L AA + + L V P ++ I+ VLA Sbjct 485 LCIVLGLAPMLVVPLLDRVTAPLTGAAISSQVLALDGWVVAPV---TVEFSSISTPVLAM 541 Query 510 ALAVA-----VLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLR 564 L VA ++AR F + W CG +LT RM+YTAT FA+P+++VF + + Sbjct 542 LLVVAGALGLLIAR-LFGKALGARYYKTWGCG-LNLTPRMEYTATGFAQPIKQVFETIYQ 599 Query 565 PDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRY 624 P +E +S+Y + + + + E+ LY PVV + A A+ LR GS+H Y Sbjct 600 PTVKLEQEFLEQSKYFIKHQRFESHIEPVFEKYLYRPVVALLLAAADRLRIIQAGSLHLY 659 Query 625 LAY 627 L Y Sbjct 660 LTY 662 >gi|325288314|ref|YP_004264495.1| NADH dehydrogenase (quinone) [Syntrophobotulus glycolicus DSM 8271] gi|324963715|gb|ADY54494.1| NADH dehydrogenase (quinone) [Syntrophobotulus glycolicus DSM 8271] Length=682 Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 228/599 (39%), Positives = 329/599 (55%), Gaps = 24/599 (4%) Query 47 IELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPM----AVVPLFVAAMLLVPAAG 102 + +D L FFM + V+ V Y YV+ E++G+ + + LF+ +M LV +G Sbjct 77 VHIDNLSAFFMIVIAVVSLAVSIYSFSYVK-EYVGQYNIGLLGLLYHLFLLSMFLVVVSG 135 Query 103 SVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGS 162 S FL WELM++ S LV+ +H R AG Y +MT LG + I+ ++L GS Sbjct 136 SFFMFLFCWELMSLISCCLVVFDHRDDHARKAGFIYMIMTHLGTLFIVAAFLLLYKETGS 195 Query 163 DRFAGLGAVC----DGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAA 218 FA AV G++ A+F + GFG KAGLVPLH WLPRAHP APS +SALMS Sbjct 196 FSFAQAAAVGPALPQGLKTAIFFMVTFGFGMKAGLVPLHIWLPRAHPAAPSNISALMSGV 255 Query 219 MVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTEN 278 M+ IYG +R + +LG GP WWG+ +L +G SAL GV+ A + D+KR+LAY + +N Sbjct 256 MLKTAIYGFIRVVIDILGGGPIWWGILILVLGVVSALLGVMYALMEHDVKRMLAYCSVDN 315 Query 279 MGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDL 338 MG+I + LG + +F +G A + A + H+ HA FK L FM AG+V A R++ Sbjct 316 MGIILMGLGVSLIFMSSGHPELAVVGLMAGLFHVFNHAVFKGLLFMGAGAVHFAAHTRNM 375 Query 339 DLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQS-LIHAAPGHDPIVALTTP 397 + +GGL +RMP T +FF + A+ +P GF+SEW+ QS L+ A+ + I+ + P Sbjct 376 EEMGGLLKRMPWTGLFFLIGAVSISAIPPCNGFISEWMTFQSILMLASSPVNIILKVLCP 435 Query 398 LAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAV 457 + ++AL L+ A KAFGI FLA+PRS +AE ARE P SMR GM+I A L+ + Sbjct 436 VFAALLALTGALAAACFVKAFGIQFLAQPRSEKAERAREVPLSMRIGMSILAFISLLTGI 495 Query 458 APLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSG-SIAPGVIAAAVL-------AA 509 P L+ + AA L + G + L SG +PG+ + +L A Sbjct 496 FPYLILKPLDSVAAGLLNIENSVMAGDKRWLNLHWASGAETSPGITVSPLLITVLLLMAF 555 Query 510 ALAVAVLARWRFRRRPAPARL-PLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTD 568 + AVL R R R+ W CG +LT +MQYTATSF++PL+ +F VL P Sbjct 556 GITFAVLKR---IGRGGKVRIEETWNCG-EELTPKMQYTATSFSKPLRIIFRFVLFPVRK 611 Query 569 IEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAY 627 +E + + Y RI+Y+ + E +Y P +A +R +GS+H YL Y Sbjct 612 VEREYELKP-YFTRRISYQGDLKPVFEDLIYHPATNFFIKIAGKMRSMQSGSIHLYLGY 669 >gi|334341772|ref|YP_004546752.1| NADH/Ubiquinone/plastoquinone (complex I) [Desulfotomaculum ruminis DSM 2154] gi|334093126|gb|AEG61466.1| NADH/Ubiquinone/plastoquinone (complex I) [Desulfotomaculum ruminis DSM 2154] Length=660 Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 237/641 (37%), Positives = 344/641 (54%), Gaps = 48/641 (7%) Query 19 GVGVGLLGMFGPVRV-VHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYV-- 75 G VG+ + P+ + +H+ +LP H+ +DRL GFF+A V V C+ Y+ Sbjct 49 GFMVGIETLLSPLPLTIHLVNILPGVDFHLSIDRLSGFFLATLSLVTFLVSCFSWNYMKL 108 Query 76 -RREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSA 134 R+E+L LFV +M L+ + TFL+AWELM +AS LV E+ VR A Sbjct 109 YRQENLAWWCFCY-NLFVLSMSLLVTVNNAITFLIAWELMTLASYFLVTFEYRHQPVRKA 167 Query 135 GLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLG----AVCDGVRAAVFMLTLVGFGSK 190 G Y VMT LG + I+ ++++ G D F+ L A+ + R+ VF+ L+GFG+K Sbjct 168 GFSYIVMTHLGTVFIIASFLMMSNGNGWD-FSTLSKNSAAMPEMTRSMVFIFALIGFGTK 226 Query 191 AGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVG 250 AG+VPLH WLP AHP APS +SA+MS M+ IYG++R LLGPG WWG +LAVG Sbjct 227 AGIVPLHLWLPMAHPAAPSNISAVMSGIMLKTAIYGLIRLVFDLLGPGQAWWGGVILAVG 286 Query 251 GTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAML 310 S+L GVL A + DLKRLLAYS+ EN+G+I + +G +F PA++A AA M Sbjct 287 IVSSLIGVLYALMEQDLKRLLAYSSVENIGIILMGIGTGFIFYSWSMMIPAAMAMAAGMF 346 Query 311 HMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAG 370 H++ HA FKSL F+ AGS+ ATG RD + LGGL ++MP T + F V +L +P G Sbjct 347 HLLNHAIFKSLLFLGAGSIYYATGSRDTEKLGGLIKKMPHTAILFLVGSLAISAIPPFNG 406 Query 371 FVSEWLLVQSLIHAA----PGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARP 426 F SE+ + QSL++ + G I A+ LA +AL L+ A KAFG+ FLA P Sbjct 407 FASEYQIYQSLLNLSYLKISGFWSIGAI---LACVALALTGALAAACFIKAFGLTFLALP 463 Query 427 RSTQAEAAREAPASMRAGMAIAAGACLVLAVAP----LLVAPMVRRAAATLPAAQAVKFT 482 R+ +A A+E P MR MA A CL L + P L+ + + + P Q F Sbjct 464 RTAKAAEAQEVPWPMRLSMAPLAVLCLALGIFPGPVLNLLTGITSQLVGSPPIPQIATFN 523 Query 483 GLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPA---RLPLWACGAAD 539 A LA L + + W R A R W CG D Sbjct 524 ----------------------ANLALVLLITLGLLWGITRLMGGAKVRRTETWGCG-ID 560 Query 540 LTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLY 599 L M+Y++ SF++PL+RV+G +L+P I + + Y IT++ V I+ LY Sbjct 561 LDATMEYSSASFSQPLRRVYGTLLQPQRQISL-RFKQLPYFGYHITFKEPVRSVIKDYLY 619 Query 600 TPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR 640 +P+ +++ + +GS+H YL+Y + ++I+L+ Sbjct 620 SPLRKITLVLSKKWQCIQSGSIHLYLSYIFITLVILLLFNE 660 >gi|182414276|ref|YP_001819342.1| NADH dehydrogenase (quinone) [Opitutus terrae PB90-1] gi|177841490|gb|ACB75742.1| NADH dehydrogenase (quinone) [Opitutus terrae PB90-1] Length=683 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 226/615 (37%), Positives = 337/615 (55%), Gaps = 18/615 (2%) Query 39 LLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVR----REHLGRVPMAVVPLFVAA 94 L P + + +D LG FF+ ++ + Y IG + R ++G V A+ + A Sbjct 74 LFPFLTLTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVG-VLAALFNALLLA 132 Query 95 MLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLV 154 LV AG + FL AWELMA+ + LV H +P+ R AG+ Y +M+ L +++GL+ Sbjct 133 TALVFMAGDLWLFLGAWELMALTAYGLVSFAHEQPETRRAGVLYFIMSHLDAACVVLGLL 192 Query 155 VLAAAGGSDRFAGL----GAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSP 210 +L A GS F L G + G R A F+L L+GFG KAG+VPLH WLP AHP APS Sbjct 193 LLFQASGSTSFDSLHAIGGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPAAHPVAPSN 252 Query 211 VSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRL 270 VSA MS ++ GIYG++R LG P WWG+ +L +G SA+ GVL A + DLKRL Sbjct 253 VSAFMSGVLIKSGIYGLIRVSFDFLGTPPGWWGMTVLVIGTVSAVLGVLYALMEHDLKRL 312 Query 271 LAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVL 330 LAY + EN+G+I + +G + LF +G A++A A + H I HA FK L F+ AG+VL Sbjct 313 LAYHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGLLFLGAGAVL 372 Query 331 AATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDP 390 AT +++ +GGLA+RMP T F + A+ LP GFVSEWL QSL+ Sbjct 373 HATHTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSLLQGFDASQS 432 Query 391 IVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAG 450 + L PL+ ++AL L+ A KA+G+ FLA+PRS A A+EA +R GMA+ Sbjct 433 LERLVLPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAAHAQEAGPMLRFGMAVLVV 492 Query 451 ACLVLAVAPL----LVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAP-GVIAAA 505 AC++L + P L+ P+ + + Q GL + L +G+I+ G++ A Sbjct 493 ACVLLGLFPTTVIRLLDPVTQLLTGQQLSGQLSLANGL-VLTSLTEKTGTISTLGLVLLA 551 Query 506 VLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRP 565 + L + + RW R R P W CG LT +M+YTAT F++P++ +F + P Sbjct 552 I--GLLPIPFVLRWVLARNTRTRRAPTWDCGLRGLTPQMEYTATGFSKPIRMIFKALFLP 609 Query 566 DTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYL 625 D++ + S + A ++ + + V + E Y PV + + +R GS+H YL Sbjct 610 RRDVQREYDF-SPHFATKLQFESHVEEVFESHFYRPVRLQILRASRRIRTLQAGSIHAYL 668 Query 626 AYGALGVLIVLVVAR 640 Y + ++ +L+ AR Sbjct 669 LYMFVTLVALLLFAR 683 >gi|340344615|ref|ZP_08667747.1| NADH dehydrogenase (Quinone) [Nitrosopumilus sp. MY1] gi|339519756|gb|EGP93479.1| NADH dehydrogenase (Quinone) [Nitrosopumilus sp. MY1] Length=681 Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 202/598 (34%), Positives = 324/598 (55%), Gaps = 15/598 (2%) Query 42 LSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAV---VPLFVAAMLLV 98 L I +D + FF+ + G ++ V Y + Y ++ + A+ +F+ +M+LV Sbjct 69 LFDFEIFIDGVSAFFLLIIGLISFAVSIYSLSYSKKFDDKKNNSALGMLFNIFILSMILV 128 Query 99 PAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAA 158 + +V FL+ WELM++ S LV+ EH +GL Y VMT LG I +++ Sbjct 129 VISNNVFFFLIFWELMSLTSFFLVIYEHENKNNLKSGLIYLVMTHLGTGFIFASFILMYT 188 Query 159 AGGS---DRFAGLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALM 215 GS D F + + V+ F+L VGFG+KAG+VPLH WLP+AHP APS VSALM Sbjct 189 QTGSFSFDSFRDVTIIPQYVKDIAFVLAFVGFGTKAGMVPLHTWLPKAHPSAPSNVSALM 248 Query 216 SAAMVNLGIYGIVR--FDLQLLGPGPR--WWGLALLAVGGTSALYGVLQASVAADLKRLL 271 SA M+ + IYGIVR FD + P W G+ ++ VG SAL G+L A + D+KR L Sbjct 249 SAVMLKIAIYGIVRHLFDFNAVDGSPDYVWLGIGIIIVGSISALVGILYALIENDIKRAL 308 Query 272 AYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLA 331 A+S+ EN+G+I + LG + +FA + ++ A+M H + H+ FK L FM AGSV Sbjct 309 AFSSIENVGIIFIGLGFSVVFAAFHLQALSVLSFIASMFHTLNHSIFKGLLFMTAGSVYY 368 Query 332 ATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPI 391 +T ++++ LGGL ++MP T + F + ++ GLP GF+SEWL +QSL+ I Sbjct 369 STHTKNIEELGGLIKKMPWTAMMFLIGSIAIVGLPPLNGFISEWLTLQSLLAVFQIPSNI 428 Query 392 VALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGA 451 + ++ + V AL GL+ A + FGI FL++ RST+A A E P M G AI A + Sbjct 429 LQVSLAFTILVFALTIGLAGATFVRLFGITFLSKGRSTKAVNAVEVPKFMLIGKAILASS 488 Query 452 CLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSI-APGVIAAAVLAAA 510 C++L + P + ++ +A LP + F + + S+ PG++ +LA+ Sbjct 489 CVLLGILPFIGMNLI-VSAFNLPYMSSSPFETISITNTSNSNFASLMMPGML--VILASV 545 Query 511 LAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIE 570 + + + W CG +L+ + QYTATS AEP++R+FG +P +++ Sbjct 546 FVGVFVFVRIIGGKTKTIKYGTWDCGFGNLSEKTQYTATSLAEPIRRIFGVFYKPHNEVD 605 Query 571 VT-HTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAY 627 V +T E+ Y+ + I + + +++LY + + +R+ +G V+ Y+ Y Sbjct 606 VDFYTKENFYLKKSINVISTTKNIFDEKLYGKTISGSLFVLNKIRKIQSGKVNAYILY 663 >gi|344943801|ref|ZP_08783087.1| NADH dehydrogenase (quinone) [Methylobacter tundripaludum SV96] gi|344259459|gb|EGW19732.1| NADH dehydrogenase (quinone) [Methylobacter tundripaludum SV96] Length=707 Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 225/613 (37%), Positives = 322/613 (53%), Gaps = 21/613 (3%) Query 40 LPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLF----VAAM 95 LP H+ D L GFF + G + V Y GYV + P A++ LF VA M Sbjct 100 LPWLPWHVRFDCLSGFFFLIVGIAVSAVSLYGPGYVNSYQENQHPFAILSLFTGLFVAGM 159 Query 96 LLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVV 155 LLV A F++AWELM++AS LV +H R A Y +M ++G +AI++G V Sbjct 160 LLVLLADDAFFFMIAWELMSVASYFLVAFQHENSANRRAAFLYLLMAEVGALAIILGFGV 219 Query 156 LAAAGGSDRFAGLGA--VCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSA 213 LA+ F L A + + FML L+GFG KAG+VP+H WLP AHP APS +SA Sbjct 220 LASFSDGFTFDALRASHLSTTWASIAFMLALLGFGMKAGIVPVHVWLPEAHPVAPSHISA 279 Query 214 LMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAY 273 LMS M+ + +YG++RF L+G WG+ LL +G SAL G+L A + +LKRLLAY Sbjct 280 LMSGVMLKVALYGLIRFCFDLIGDVQWQWGVVLLILGTISALGGILYAMMQPNLKRLLAY 339 Query 274 STTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAAT 333 S+ EN+G+I + LG + +F G A++ AA+ H HA FK+L F+ AG + T Sbjct 340 SSVENIGIIFMVLGLSMIFMSNGHPQLAALGFLAALFHAFNHALFKNLLFLGAGMIHHQT 399 Query 334 GLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVA 393 ++D++GGL ++MP T+V F + + LPL GFVSEWL Q+ + + ++ Sbjct 400 HELNIDMMGGLIKKMPKTSVLFLIGCMSISSLPLFNGFVSEWLAFQTALQVDVLDNGVLR 459 Query 394 LTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPAS-MRAGMAIAAGAC 452 P+A +AL L+ A K FG+ FL +PRS + A E M AG A+ AG C Sbjct 460 SLIPVAAAALALTAALAAACFVKVFGLIFLGQPRSHHCDKAHEVQDKGMLAGPALLAGLC 519 Query 453 LVLAVAPLLVAPMVRRAA-----ATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVL 507 + + P V ++ + TLP A+ + L V A S AP + VL Sbjct 520 FLFGIFPGPVISLINGVSGQLLGETLPNDAALGWLWLAPV---SANQASYAPPL----VL 572 Query 508 AAALAVAVLARWRFRRRPAPA-RL-PLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRP 565 AL ++ W RR PA A R+ W CG LT RMQY++++F P +R+F V Sbjct 573 IGALIAGCISFWYLRRNPATALRISETWDCGFGGLTPRMQYSSSAFTMPFRRIFAKVWII 632 Query 566 DTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYL 625 D I+ + Y + D RLY P+ AV +A+L+ R TG++ YL Sbjct 633 DEQIDKDMQGAMNQDVAAVHYHLQIQDHSWPRLYHPIEHAVNKLAQLVGRIQTGNIRVYL 692 Query 626 AYGALGVLIVLVV 638 Y +L++L V Sbjct 693 GYSFATLLLLLWV 705 >gi|338812160|ref|ZP_08624349.1| NADH dehydrogenase (quinone) [Acetonema longum DSM 6540] gi|337275816|gb|EGO64264.1| NADH dehydrogenase (quinone) [Acetonema longum DSM 6540] Length=679 Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 216/600 (36%), Positives = 324/600 (54%), Gaps = 30/600 (5%) Query 45 VHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPM--AVVPLFVAAMLLVPAAG 102 V + +D L F+ L G + Y +GY R+ G++P+ A+ F+ ++ LV Sbjct 78 VSVRVDLLSAHFLLLMGVAGFCISLYAVGYCRQYQAGQLPLLTALFNAFLLSIALVLTLS 137 Query 103 SVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGS 162 FL+AWE+MA+ S +LV EH +P Y +MT +G +++ ++L A G+ Sbjct 138 QAMAFLIAWEVMAVISFLLVNFEHEKPGTTRTAFIYMIMTHIGTALVIIAFLLLVQAAGT 197 Query 163 DRFAGLGAV--CDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMV 220 F L A + VR VF+ +GFG KAG++P H WLPRA+ APS +SALMS M+ Sbjct 198 MDFTALAAAYKNETVRNGVFLTAFLGFGIKAGMIPFHVWLPRAYTAAPSHISALMSGVMM 257 Query 221 NLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMG 280 +YG+ RF L LG GP WWG +L +GG SA+ G+L A ++ ++KRL AYS+ EN+G Sbjct 258 KTAVYGMARFFLDFLGQGPTWWGGMVLCLGGVSAVMGILYALLSNNIKRLFAYSSVENIG 317 Query 281 LITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDL 340 ++ L +GAA LF+ G G A++A A +LH HA FKSL FMA+G+V+ ATG +L+ Sbjct 318 IMLLGIGAALLFSGRGQEGLAALAWTAVLLHAFNHAVFKSLLFMASGAVIRATGTNELER 377 Query 341 LGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLI---HAAPGHDPIVALTTP 397 +GGLA+ MP T+ + A+ LP GF+SEWL+ QSL PG I LT Sbjct 378 MGGLAKSMPYTSFVCLIGAVSITALPPFNGFMSEWLVYQSLFFIEQVIPG--AIGRLTAA 435 Query 398 LAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAV 457 + + ++ L+ L++AA KA+GI FL +PRS Q ARE M A M I A CL L + Sbjct 436 VFIALLGLSGALALAAFAKAYGIAFLGKPRSLQGRKAREVSPFMLAPMGILALFCLGLGL 495 Query 458 AP----------LLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVL 507 P L+ ++ AA T P + + +G++ +GS PG++ +L Sbjct 496 WPQPILASLQLMLVGYGRMQEAAMTFPWQGGLTWQ-IGSLA-----AGSHIPGLLPLLLL 549 Query 508 AAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDT 567 + + R R RP W CG RM+Y+A F++P+Q F +L P Sbjct 550 NLCIGWLLF---RLRGRPVKTTGETWTCGIVP-DARMEYSAVGFSKPVQIAFRRLLPPQR 605 Query 568 DIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAY 627 + A+ RY ++Y TAV + +RLY P+ + + L++ G+V Y+ Y Sbjct 606 ETLADGNAQ-RYHGRVLSYYTAVYNVFTERLYHPLGQIIVKWSTRLKKMQAGNVQLYIGY 664 >gi|114775569|ref|ZP_01451137.1| NADH dehydrogenase subunit N [Mariprofundus ferrooxydans PV-1] gi|114553680|gb|EAU56061.1| NADH dehydrogenase subunit N [Mariprofundus ferrooxydans PV-1] Length=633 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 232/603 (39%), Positives = 317/603 (53%), Gaps = 7/603 (1%) Query 40 LPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVP 99 LP +H +D L FF+ + G + PV Y GY++ E +PLFV ML V Sbjct 30 LPWLPMHFRVDGLSAFFLLVIGTLLLPVAIYSQGYLKGEKRLGALAVFLPLFVLGMLGVV 89 Query 100 AAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAA 159 A TF+L WE+M+++S LV EH R + R AG Y +M L + IL G VL AA Sbjct 90 IADDAFTFMLFWEMMSVSSYFLVTFEHERLENRKAGFIYLLMAHLAGLLILGGFAVLYAA 149 Query 160 GGSDRFAGLGA--VCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSA 217 GS F+ + A + A F+L GFG+KAG+VP+H WLP AHP APS VSALMS Sbjct 150 SGSFEFSVMRAAHLFPFWATAAFLLVAFGFGTKAGVVPMHGWLPDAHPVAPSNVSALMSG 209 Query 218 AMVNLGIYGIVRFDLQLLGPGP--RWWGLALLAVGGTSALYGVLQASVAADLKRLLAYST 275 M+ + ++G +R L+GPG WWG +L G SA+ GVL A DLKRLLAY + Sbjct 210 IMLKVAVFGFLRVVWDLIGPGDFQWWWGALVLTAGSASAVSGVLFALQQHDLKRLLAYHS 269 Query 276 TENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGL 335 EN+G+I + LG L A G A++ A + H I HA FK L FM AG+VL TG Sbjct 270 IENIGIILIGLGLGMLLAHFGHPLLAALGLIAGLYHTINHALFKGLLFMGAGAVLHVTGT 329 Query 336 RDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALT 395 RD++ +GGL RMPAT +FF VA + LP GFVSEWL Q+ + A ++ Sbjct 330 RDMETMGGLIHRMPATALFFLVACVSISALPPFNGFVSEWLTFQTALMAPQLGGALLTAI 389 Query 396 TPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVL 455 P + ++ALA L+ A K FG+ FL RS A E M+ GMAI A CL+L Sbjct 390 VPFSAAMLALAGALAAACFVKVFGVVFLGHARSEHVAGAHEVDGWMKLGMAIPALLCLLL 449 Query 456 AVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAV 515 + P++ P++ A+L + L + + A A LA L V Sbjct 450 GLLPVMFIPLMDAIPASLLHVSLGAHLYEHGWLWLTPVDATHA-SYSAPVALAGMLGVGG 508 Query 516 LARWRFRRRPAPARL-PLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHT 574 L W + R LW+CG + RMQY AT+F++PL+R+F VLRP+ I V Sbjct 509 LVYWWLHPKGCRIRRGALWSCGNPHIHARMQYNATAFSQPLRRIFAGVLRPEEHIHVERP 568 Query 575 AESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLI 634 A + + R+ Y V D + LY P+ +A+ +R H +H YLA+ +L Sbjct 569 AH-KLLTRRVRYTVHVGDPAVRHLYQPLARLTLGLAKRVRHEHQRGIHAYLAWTFATILF 627 Query 635 VLV 637 +LV Sbjct 628 LLV 630 >gi|344345384|ref|ZP_08776236.1| NADH dehydrogenase (quinone) [Marichromatium purpuratum 984] gi|343803004|gb|EGV20918.1| NADH dehydrogenase (quinone) [Marichromatium purpuratum 984] Length=670 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 246/604 (41%), Positives = 318/604 (53%), Gaps = 26/604 (4%) Query 46 HIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVP----LFVAAMLLVPAA 101 H++LD L GFF+AL G + G Y YVR GR +A + LFV MLLV A Sbjct 77 HLQLDALAGFFLALIGILVTAAGIYGPAYVRGLENGRESLAALGGFSGLFVTGMLLVVLA 136 Query 102 GSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGG 161 F++AWELM++AS LV H P R A Y +M +G +AIL+G VLAA G Sbjct 137 ADAFVFMVAWELMSLASYFLVAFHHDNPANRRAAFLYLLMAHVGGLAILLGFGVLAAFAG 196 Query 162 SDRFAGL-GAVCDGVRAAV-FMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAM 219 F L GA A++ F L L+GFG KAGLVPLHAWLP AHP APS +SALMS AM Sbjct 197 GFEFELLRGAALSTPWASLCFALVLLGFGMKAGLVPLHAWLPEAHPVAPSHISALMSGAM 256 Query 220 VNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENM 279 + + +YG VR L+G WG+ +LAVG SAL GVL A + +DLKRLLAYS+ EN+ Sbjct 257 LKVAVYGFVRVVFDLIGQFHWQWGVVMLAVGSLSALTGVLFAMMQSDLKRLLAYSSVENL 316 Query 280 GLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLD 339 G+I +ALG A LF T A++A AA+ H I HA FK L F+ AG+VL +T RDL+ Sbjct 317 GIIFIALGLAVLFMATAHPTLAALAFVAALYHAINHALFKGLLFLGAGAVLHSTHERDLE 376 Query 340 LLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLA 399 +GGL RRMP T +FF V + LP GFVSEWL Q+ + A ++ P+ Sbjct 377 QMGGLLRRMPWTGLFFLVGCVAISALPPLNGFVSEWLTFQAALQAWQLDSGVLRSLIPIV 436 Query 400 VGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAP 459 V+AL L A K +G+ FL + RS AR P MR G + A C++L V P Sbjct 437 SAVLALTGALVAATFVKVYGVAFLGQARSRHVRRARVVPLGMRWGQGLLALFCVLLGVLP 496 Query 460 LLVAPMVRRAAATLPAAQAVKFTGL-----GAVVRLPAMSGSIAPGVIAAAVLAAALAVA 514 V ++ P A AV TGL G + L +S A ++L AL Sbjct 497 TQVIALLD------PVAVAVVGTGLPQAAAGGWLWLTPVSAETASYSAPLSILLLALIAG 550 Query 515 VLARW-RFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTH 573 W R R R W CG T RMQY+A +FA+P++RVF D Sbjct 551 AAILWARRGRVRRVRRCDPWDCGLTPPTPRMQYSAAAFAQPIRRVFALAFAIDERKPAAT 610 Query 574 TAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVL 633 R YR +AD LY P+ AV + A + +G+V YL + L L Sbjct 611 DTRPR-------YRLRIADRAWSLLYVPLAQAVESAARRVVLLQSGNVRVYLGW-TLATL 662 Query 634 IVLV 637 +VL+ Sbjct 663 LVLL 666 >gi|333983295|ref|YP_004512505.1| NADH dehydrogenase (quinone) [Methylomonas methanica MC09] gi|333807336|gb|AEG00006.1| NADH dehydrogenase (quinone) [Methylomonas methanica MC09] Length=706 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 221/619 (36%), Positives = 312/619 (51%), Gaps = 22/619 (3%) Query 35 HVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLF--- 91 +G LP H+ D L GFF + G V Y GYV+ + P AV+ LF Sbjct 92 QIGLGLPWLPWHVRFDGLSGFFFLIVGIAVIAVSIYGPGYVQAYQEEKHPFAVLGLFTGL 151 Query 92 -VAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAIL 150 VA MLLV A F++AWELM++AS LV +H P R A Y +M ++G +AI+ Sbjct 152 FVAGMLLVLLADDAFFFMIAWELMSVASYFLVAFQHENPANRRAAFLYLLMAEVGALAII 211 Query 151 VGLVVLAAAGGSDRFAGL-GAVCDGVRAAV-FMLTLVGFGSKAGLVPLHAWLPRAHPEAP 208 +G VLAA F L A A++ F+L L+GFG KAG+VP+H WLP AHP AP Sbjct 212 LGFGVLAAFTDGLTFDALRQANLSTTWASIAFVLALLGFGMKAGIVPIHVWLPEAHPVAP 271 Query 209 SPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLK 268 S +SALMS M+ + +YG++RF LL WG+ LL +G SAL G+L A + +LK Sbjct 272 SHISALMSGVMLKVAVYGLIRFCFDLLTDVHWQWGVVLLVLGTISALGGILYAMMQPNLK 331 Query 269 RLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGS 328 RLLAYS+ EN+G+I + LG A +F G A++ AA+ H HA FK+L F+ AG Sbjct 332 RLLAYSSVENIGIIFMVLGLAMIFMANGFPQLAALGLLAALFHAFNHALFKNLLFLGAGV 391 Query 329 VLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGH 388 + D+D +GGL +RMP T+ F V + LPL GFVSEWL Q+ + Sbjct 392 LQHQVHSLDIDNMGGLIKRMPQTSFLFLVGCMSISSLPLFNGFVSEWLAFQTALQVDVLD 451 Query 389 DPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPAS-MRAGMAI 447 + ++ P+A +AL L+ A K FG+ FL PRS +E A+E M + + Sbjct 452 NGVLRSLIPVAAAALALTAALAAACFVKVFGMIFLGLPRSRHSEKAQEVDDKGMLLALKV 511 Query 448 AAGACLVLAVAPLLVAPMVRRAAA-----TLPAAQAVKFTGLGAVVRLPAMSGSIAPGVI 502 AG C + P L+ + A +LP + + L V + S +P ++ Sbjct 512 LAGLCFFFGIFPTLIIAALNNVAKQLLGQSLPNDTLLSWMWLAPV---SSQKASYSPILV 568 Query 503 AAAVLAAALAVAVLARWRFRRRPAPA---RLPLWACGAADLTVRMQYTATSFAEPLQRVF 559 VL A W RR P R W CG L RMQY+ ++F P +R+F Sbjct 569 LIGVLIA----TGFTFWYLRRNPDTKTMRRSATWDCGFGGLNARMQYSCSAFTMPFRRIF 624 Query 560 GDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTG 619 V + I+ I YR V D RLY P+ + + A L+ R TG Sbjct 625 AKVWLIEEQIDKDMQGALDMDVASIRYRLQVEDHSWPRLYQPIAHGINSAARLVGRIQTG 684 Query 620 SVHRYLAYGALGVLIVLVV 638 ++ YL Y + ++++L V Sbjct 685 NIRVYLGYSFVTLILMLWV 703 >gi|91202879|emb|CAJ72518.1| similar to membrane-bound [NiFe]-hydrogenase-3, subunit C [Candidatus Kuenenia stuttgartiensis] Length=678 Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 201/602 (34%), Positives = 300/602 (50%), Gaps = 22/602 (3%) Query 49 LDRLGGFFMALTGAVAAPVGCYLIGYVR---REHLGRVPMAVVPLFVAAMLLVPAAGSVT 105 LD L FFM + + Y +GY + + R L + +MLLV A + Sbjct 76 LDPLSSFFMLVISVIGFVASIYSMGYTKLYVNKRDTRFLGFAYNLLLVSMLLVVTANNAL 135 Query 106 TFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGS--- 162 F++ WELM + S LV+ EH P R AG Y VM+ +G I V ++ A G Sbjct 136 VFMIVWELMTLVSFFLVIFEHENPTNRKAGYVYLVMSHIGAGLIAVAFFIMFAYAGEAFT 195 Query 163 ---DRFAGLGAVCDGV-RAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAA 218 D F +GA + + VF L ++GFG KAG+ PLH WLP AHP APS VS +MS Sbjct 196 FSFDDFRHIGAHMPPIYKNIVFFLIIIGFGIKAGIFPLHLWLPMAHPAAPSNVSMVMSGV 255 Query 219 MVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTEN 278 M+ IYG +RF + L P P WWG +L G +SA+ G+L A + D+K LLAYS+ EN Sbjct 256 MIKTAIYGFIRFYFEFLTPCPPWWGFIVLVAGASSAILGILYALMERDIKTLLAYSSVEN 315 Query 279 MGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDL 338 +G+I + +G + +F +S+A A + H+I HA FK L F AG++ +T +++ Sbjct 316 IGIILIGIGLSMIFKSYNLMTLSSLAMMAGLYHLINHAVFKCLLFGCAGNIYYSTHTKNI 375 Query 339 DLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPL 398 + LGGL +R+ T F V AL +P GF+SEWL+ QSL++ + T + Sbjct 376 EELGGLIKRLRVTAPLFLVGALSISAIPPLNGFMSEWLIFQSLLNGFYIPSVFFKVMTVI 435 Query 399 AVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVA 458 +VAL L KAFG+ FLA PRS A+E P M M I A C+ + + Sbjct 436 CGAIVALTGALVAMCFVKAFGVSFLALPRSEHTRKAKEVPLVMLVSMGILASMCVFMGLF 495 Query 459 PLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGS---IAPG---VIAAAVLAAALA 512 P + + + L + ++ ++ + ++P + +L Sbjct 496 PATIMATINQVNTHLLGTNIINIITSYDWLQTKSIHTNFTDLSPKSAPIFGLILLVITFG 555 Query 513 VAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVT 572 + R F +R W CG R YTAT+F +P + +FG++ RP +I T Sbjct 556 FLTMLRPGFTKRIYET----WTCGITP-EPRFGYTATAFTKPFKVIFGNLYRPRFEISTT 610 Query 573 HTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGV 632 ++ +Y A+ ITY + E+ Y PV V ++ +R HTGS+H YLAY + + Sbjct 611 YSVP-KYFAKSITYLGEITPIFEKYFYNPVSSYVLNISNKIRWVHTGSIHVYLAYIFVTL 669 Query 633 LI 634 LI Sbjct 670 LI 671 >gi|56477810|ref|YP_159399.1| hydrogenase 4 subunit B [Aromatoleum aromaticum EbN1] gi|56313853|emb|CAI08498.1| Hydrogenase-4 component B [Aromatoleum aromaticum EbN1] Length=666 Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 237/618 (39%), Positives = 326/618 (53%), Gaps = 36/618 (5%) Query 40 LPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVV---PLFVAAML 96 LP H+ LD L FF+ + GA + + GY R G P + LF+A+M Sbjct 67 LPDLPFHLRLDGLSAFFLFVIGATGVGISIFAAGYFRLGE-GTPPGLMCLEYHLFLASMA 125 Query 97 LVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVL 156 +V A F++ WE MA++S LV + H P +R+AG Y ++ +G IAIL+ VL Sbjct 126 MVVLADDAYAFMVMWETMALSSFFLVTANHRVPAIRAAGFLYLLVAHVGAIAILLCFGVL 185 Query 157 AAAGGSDRFAGLGA--VCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSAL 214 A G FA + A + +A F+L VGFG+KAG++PLH WLP AHP APSPVSAL Sbjct 186 QANTGDYTFANMRAQSLPPLWASAAFLLATVGFGAKAGILPLHVWLPEAHPAAPSPVSAL 245 Query 215 MSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYS 274 MS M+ IYG++R LLG WWG+ LLAVG +ALYGV+ ++V D+KRLLAYS Sbjct 246 MSGVMLKTAIYGLLRVSFDLLGAQQWWWGVLLLAVGLATALYGVVFSAVQTDMKRLLAYS 305 Query 275 TTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATG 334 + EN+GL+ + LG LF G +++A AA+ H+I HA FKSL F+A GSVL +TG Sbjct 306 SIENIGLLFVGLGLGVLFNAYGMTALSALALTAALYHVIGHAFFKSLLFLATGSVLHSTG 365 Query 335 LRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVAL 394 R L LGGL RRMP V L + GLP +GFVSEWLL+QS + D + + Sbjct 366 ERSLGKLGGLMRRMPWVAWLSLVGVLASSGLPPFSGFVSEWLLLQSFLFTTDLPDSFLNM 425 Query 395 TTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLV 454 P+ +AL L+ M K FG+ FL +PR + A A RAG+ C++ Sbjct 426 LVPVLAAGIALVAALAGYTMVKFFGVIFLGQPREPKLAEAHPASPLERAGLVWLGAGCVL 485 Query 455 LAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVR-----LPAMSG----SIAPGVIAAA 505 L + P+ + ++ R L G+GA VR L A S S P V Sbjct 486 LGLFPVPIIGIIDRVTQLLVGG------GIGATVRANGWLLLAPSSLERASYNPLVFLVV 539 Query 506 VLAAALAVAVLARWRF---RRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDV 562 V + L AVL R RF R R APA W CG T RMQ TA F +P++++F V Sbjct 540 VGLSVLLAAVLVR-RFYHGRLRRAPA----WDCGYPAQTARMQDTAEGFGQPIRQIFEPV 594 Query 563 LRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVH 622 R ++ A R YR + D LY P+ +A ++ R G + Sbjct 595 FRMRRELPAPFDA-------RPVYRVTIEDHFWHWLYLPLARLTERVARVVGRLQRGRIA 647 Query 623 RYLAYGALGVLIVLVVAR 640 YL Y + ++++L+VA+ Sbjct 648 IYLLYSFVTLIVLLLVAK 665 >gi|258514101|ref|YP_003190323.1| NADH/Ubiquinone/plastoquinone (complex I) [Desulfotomaculum acetoxidans DSM 771] gi|257777806|gb|ACV61700.1| Hydrogenase, membrane subunit [Desulfotomaculum acetoxidans DSM 771] Length=661 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 227/621 (37%), Positives = 333/621 (54%), Gaps = 38/621 (6%) Query 34 VHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYV---RREHLGRVPMAVVPL 90 V++G +LP I +D L GFF+A V A V Y Y+ + E++ + Sbjct 65 VNLGTVLPGVVFQIVMDGLSGFFVATISLVVALVSFYSWNYMSIYKTENIAWWSFCY-NV 123 Query 91 FVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAIL 150 FV +MLLV + FL+ WELM +AS LV E+ QVR AG Y VMT LG + I+ Sbjct 124 FVLSMLLVVTVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRKAGFSYIVMTHLGTVFIM 183 Query 151 VGLVVLAAAGGSDRFAGLGA----VCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPE 206 ++ G FA L A + D V++ +F+ L+GFG+KAG+VPLH WLP AHP Sbjct 184 TAFFLMFKGTGGWDFAVLSANSHGLPDAVKSLIFVCALIGFGTKAGIVPLHIWLPLAHPA 243 Query 207 APSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAAD 266 APS VSA+MS M+ IYG++R + +LGPGP WWG +LAVG SA+ GVL A + D Sbjct 244 APSNVSAVMSGVMLKTAIYGMIRLIIDILGPGPAWWGGVVLAVGVVSAVMGVLYALMEHD 303 Query 267 LKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAA 326 +KRLLA+ + EN+G+I + LG A +F A++A AA + H++ HA FKSL F+ Sbjct 304 MKRLLAFHSVENIGIILMGLGTALIFYAWSMPVAAAVALAAGLFHVLNHAIFKSLLFLGT 363 Query 327 GSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAP 386 GSV T +D++ LGGL ++MP T + F V A+ +P GF SE+ + QSL+ + Sbjct 364 GSVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASEYQIYQSLLGMS- 422 Query 387 GHDPIVALTTPLAV--GV-VALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRA 443 + + A + V GV +AL L+ A KAFGI FLA PR+ +A AA E P MR Sbjct 423 -YQKVSAFWSIAGVLSGVALALTGALAAACFVKAFGISFLALPRTKKAAAAEEVPFLMRI 481 Query 444 GMAIAAGACLVLAVAPLLV----APMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAP 499 MA A CL+ VAP LV P++ + P + + + L + + Sbjct 482 SMAPLAVLCLLFGVAPGLVLNNITPLIEQLVPGTPLPEIATYN-----MNLTLLLVLVGV 536 Query 500 GVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVF 559 + A+ L A V RR W CG +LT M+YTA SF++P++R + Sbjct 537 FLFVASKLTGAKKV--------RRTET------WGCG-IELTAEMEYTAASFSQPVRRTY 581 Query 560 GDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTG 619 +L+P ++ + Y I + V IE LY P+ + +++ + +G Sbjct 582 RAILQPKRKVKNNYRLLP-YFDFHIHFDEHVRPVIEDFLYNPLRKTIIKTSKIWQHIQSG 640 Query 620 SVHRYLAYGALGVLIVLVVAR 640 S++ YL Y + ++++LV AR Sbjct 641 SINLYLGYIFITLVVLLVWAR 661 >gi|113868172|ref|YP_726661.1| hydrogenase 4 subunit B [Ralstonia eutropha H16] gi|113526948|emb|CAJ93293.1| formate hydrogenlyase subunit 3 [Ralstonia eutropha H16] Length=673 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 234/605 (39%), Positives = 320/605 (53%), Gaps = 31/605 (5%) Query 40 LPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVV---PLFVAAML 96 LP H+ LD L +F+ + G AA + + GY R G P + LF+A+M Sbjct 76 LPSLPFHVRLDSLSAYFLMVMGGAAAGISTFAAGYFRTGE-GTPPGLLCLEYHLFLASMA 134 Query 97 LVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVL 156 V A +F++ WE MA+AS LV + H +VR+AG Y M ++G IAIL+ VL Sbjct 135 GVILADDAYSFMVMWETMALASFFLVTANHRIAEVRAAGYLYITMARIGAIAILLCFGVL 194 Query 157 AAAGGSDRFAGL--GAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSAL 214 A G FA + A+ +A F+L L GFG+KAG++PLH WLP AHP APSPVSA+ Sbjct 195 QANTGDYTFANMRAQALTPFWASAGFLLALFGFGAKAGILPLHIWLPEAHPAAPSPVSAM 254 Query 215 MSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYS 274 MS M+N IYG++R LL WWG LLA+G +AL+GV+ A+V D+KRLLAYS Sbjct 255 MSGVMLNTAIYGLLRVSFDLLPMRLWWWGGLLLAIGLATALFGVVFAAVQTDMKRLLAYS 314 Query 275 TTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATG 334 + ENMGL+ +A+G LF+ G A++A AA+ H+ +HA FKSL F+ GSVL AT Sbjct 315 SIENMGLLFVAMGLTLLFSAYGMKPMAALALTAALYHVASHAFFKSLLFLGTGSVLHATT 374 Query 335 LRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVAL 394 R L LGGL R MP + L + GLP GFVSEWLL+QS + +PI+ + Sbjct 375 ERSLGKLGGLIRYMPWVGWLTLLGVLASAGLPPLGGFVSEWLLLQSFLFTPGLPEPILTM 434 Query 395 TTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLV 454 P+ ++AL L+ M K FG+ FL +PR + A +A RAGM A C+ Sbjct 435 LIPVVAALIALVAALAGYTMVKFFGVIFLGQPREPRLVNAHDAGRWERAGMLWLALGCIA 494 Query 455 LAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAA------VLA 508 L + P ++ P Q + +GLGA R A S +AP +A A L+ Sbjct 495 LGLLPTQFVQLID------PVTQQLVASGLGA--RTAASSWLLAPNGLAQASYGPVIFLS 546 Query 509 AALAVAVLARWRFRRRPAPARL---PLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRP 565 LA LA + RR RL P WACG T RMQ TA F +P++++F Sbjct 547 GILASVALA-YLLVRRLYHGRLRRSPPWACGFPWGTARMQDTAEGFGQPIRQIFEPFFLM 605 Query 566 DTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYL 625 D+ E+ YR VAD + +Y PV+ + +A L+ G + YL Sbjct 606 RRDLPTPFD-------EQPHYRVTVADHFWRWMYVPVIDLASYLARLIGLMQQGRISVYL 658 Query 626 AYGAL 630 Y L Sbjct 659 LYSFL 663 >gi|154150670|ref|YP_001404288.1| hydrogenase membrane subunit [Candidatus Methanoregula boonei 6A8] gi|153999222|gb|ABS55645.1| NADH dehydrogenase (quinone) [Methanoregula boonei 6A8] Length=649 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 211/604 (35%), Positives = 310/604 (52%), Gaps = 34/604 (5%) Query 41 PLSGVHIE--LDRLGGFFMALTGAVAAPVGCYLIGYVRR-EHLGR--VPMAVVPLFVAAM 95 P G+ + +DRL FF+ L GAV+A V Y GY+ E GR + LFV AM Sbjct 67 PFPGISVTFFIDRLAAFFLVLIGAVSACVAVYCTGYIEEMEGAGRRNILCGCTALFVFAM 126 Query 96 LLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVV 155 LV A+ + +FLL WELMA S +LV+ ++ + AG++Y VMTQL + +++G+++ Sbjct 127 ALVVASATTISFLLFWELMAAVSFLLVMYDYTGSETTRAGIFYFVMTQLSTLFVMLGIIL 186 Query 156 LAAAGGSDRFA--GLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSA 213 L A GS A + A + A F+ VGF KAG++P H WLP AHP +PSPVSA Sbjct 187 LFFATGSFAIAPAHVTAGSLPLVTAAFLALFVGFSVKAGIIPFHKWLPYAHPASPSPVSA 246 Query 214 LMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAY 273 LMS M+ + +YG++RF + + P WWG+ +L G TSA+ GV+ A D+K LLAY Sbjct 247 LMSGVMLKVAVYGLIRFLVAVFTPD-LWWGMVILIAGITSAVLGVIYAIKEDDIKGLLAY 305 Query 274 STTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAAT 333 S+ EN+G+I + +G +F+ TG A+I+ AA+ H + HA FKSL F+ +GSV+ AT Sbjct 306 SSIENIGIIFVGIGLFVIFSCTGLPMLATISLLAALFHSLNHALFKSLLFLTSGSVVHAT 365 Query 334 GLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVA 393 RD++ +GGLA RMP T+ F V A LP GF SE L+ + + DP++ Sbjct 366 HTRDIEQMGGLASRMPVTSALFFVGAAAIAALPPLNGFASELLVYTAFFESVTVADPLIK 425 Query 394 LTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACL 453 + + + + AL + LS A KAFG FLARPRS ++ AREA +M AG A+ A AC+ Sbjct 426 ILLFVCLALFALTSALSAACFVKAFGSIFLARPRSQESREAREAGRAMLAGPALLAIACV 485 Query 454 VLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAV 513 VL V + G G + +P + ++ A+ L V Sbjct 486 VLGVFSYQI------------------LAGFGYIFPIPDLLLVSVLLLVMGALTYIVLYV 527 Query 514 AVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTH 573 R W CG+ L +YT F+EP+ +F + R + + Sbjct 528 TASHAERTSET--------WGCGSLSLPASAEYTGHGFSEPIVTIFAPLYRTKKTVTKNY 579 Query 574 TAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVL 633 + T + E+ LY P+ A + R G + YL Y L V+ Sbjct 580 YDRHDCIVAGGTAEIRLVKFFEEYLYLPLARGANRAAGYVARMQNGCLDTYLLYVFLAVV 639 Query 634 IVLV 637 V++ Sbjct 640 AVII 643 >gi|220929113|ref|YP_002506022.1| NADH/Ubiquinone/plastoquinone (complex I) [Clostridium cellulolyticum H10] gi|219999441|gb|ACL76042.1| NADH/Ubiquinone/plastoquinone (complex I) [Clostridium cellulolyticum H10] Length=688 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 204/614 (34%), Positives = 338/614 (56%), Gaps = 20/614 (3%) Query 40 LPLSGVHIELDRLGGFFMALTGAVAAPVG----CYLIGYVRREHLGRVPMAVVPLFVAAM 95 +P + +D L FF+ + VA V Y+ Y ++++ V + LF+ +M Sbjct 73 IPFLSIEFNIDSLSAFFIMIISIVAVIVSLFSYTYMSHYFSKKNIS-VFGCLYNLFIVSM 131 Query 96 LLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVV 155 +L+ A+ ++ FL+ WELM++ S LV+ EH + +V+ AG Y +MT +G + I+ V+ Sbjct 132 VLLVASSNMLLFLVFWELMSLISFFLVIYEHEKDEVQKAGRIYIIMTYIGTVCIMAAFVL 191 Query 156 LAAAGGSDRFAGLG--AVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSA 213 +AA GS + + ++ G +F+L LVGFG+KAG++P+H WLP AHP APS +SA Sbjct 192 IAAYTGSFNLSSINPQSIPHGSANIIFLLLLVGFGTKAGIIPVHIWLPYAHPVAPSNISA 251 Query 214 LMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAA--DLKRLL 271 LMS M+ + IYG+ RF +L WWG+A+L +G SAL G+ SVA+ ++KRLL Sbjct 252 LMSGVMIKMAIYGLFRFIFNILPVSGLWWGVAVLCIGIASALIGI-AYSVASTTNIKRLL 310 Query 272 AYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLA 331 AYS+ ENMG+I +G + + Y S++ A +LH + HA FKSL FM AG++ Sbjct 311 AYSSIENMGIILAGIGMMMIARASENYPLLSLSLTATLLHTLNHAVFKSLLFMGAGTIQY 370 Query 332 ATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLI----HAAPG 387 +T ++++ LGGL ++MPA +VF + L +P GF+SE+++ +++I + AP Sbjct 371 STHTKNMEKLGGLIKKMPAASVFIFIGCLSISAVPPFNGFISEFMIFRTIISSISYFAPS 430 Query 388 HDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAI 447 + ++ + +A +AL L K FGI FL PRS +AE+A+E M A +A Sbjct 431 ENFLLVVILMVAAAALALTGALVAFCFVKFFGISFLGMPRSLKAESAKEPGKPMLAALAS 490 Query 448 AAGACLVLAVAPLLVAPMVRRAAATLPAAQ--AVKFTGLG-AVVRLPAMSGSIAPGVIAA 504 AA CL+L + P ++ + L + A ++ L + S SI+ G + A Sbjct 491 AAVLCLLLGILPKYAIRLIDGVGSQLINIKMLATDWSLLSPQYYPVGNSSLSISSG-LTA 549 Query 505 AVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLR 564 +L + ++ R+R + R W CG L +MQY+AT F++ L+ +F + Sbjct 550 ILLVLLGGLLLVVVMALRKRTSVERYNTWDCGFTKLNPKMQYSATGFSKSLRIIFRGFFK 609 Query 565 PDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLR-RAHTGSVHR 623 P D+E+T ++ E Y T+ E+ LY P++ + + +R TGS+H Sbjct 610 PGRDLEITEGIAPYHIKEG-KYTTSTVRFFEKYLYVPIISTIIKFSRKIRFTVQTGSIHA 668 Query 624 YLAYGALGVLIVLV 637 YL Y + ++++L+ Sbjct 669 YLMYFFVAMVLMLL 682 Lambda K H 0.326 0.137 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1480196386240 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40