BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0090
Length=256
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607232|ref|NP_214604.1| hypothetical protein Rv0090 [Mycoba... 504 4e-141
gi|289441459|ref|ZP_06431203.1| membrane protein [Mycobacterium ... 502 2e-140
gi|339630174|ref|YP_004721816.1| hypothetical protein MAF_00910 ... 501 4e-140
gi|340625127|ref|YP_004743579.1| hypothetical protein MCAN_00941... 448 4e-124
gi|289747857|ref|ZP_06507235.1| conserved hypothetical protein [... 436 1e-120
gi|240168042|ref|ZP_04746701.1| hypothetical protein MkanA1_0191... 424 6e-117
gi|183980279|ref|YP_001848570.1| hypothetical protein MMAR_0246 ... 422 2e-116
gi|118619906|ref|YP_908238.1| hypothetical protein MUL_4867 [Myc... 410 9e-113
gi|118466013|ref|YP_884348.1| hypothetical protein MAV_5234 [Myc... 400 9e-110
gi|336459982|gb|EGO38894.1| putative membrane protein [Mycobacte... 398 4e-109
gi|342859515|ref|ZP_08716169.1| hypothetical protein MCOL_11563 ... 397 1e-108
gi|254820555|ref|ZP_05225556.1| hypothetical protein MintA_11541... 395 2e-108
gi|296167238|ref|ZP_06849643.1| conserved hypothetical protein [... 378 4e-103
gi|86742415|ref|YP_482815.1| hypothetical protein Francci3_3735 ... 246 3e-63
gi|111225304|ref|YP_716098.1| hypothetical protein FRAAL5957 [Fr... 243 2e-62
gi|297154411|gb|ADI04123.1| hypothetical protein SBI_01002 [Stre... 236 3e-60
gi|294631466|ref|ZP_06710026.1| membrane protein [Streptomyces s... 235 5e-60
gi|337768207|emb|CCB76920.1| conserved protein of unknown functi... 231 9e-59
gi|312199378|ref|YP_004019439.1| hypothetical protein FraEuI1c_5... 228 5e-58
gi|169629675|ref|YP_001703324.1| hypothetical protein MAB_2589c ... 227 1e-57
gi|311898420|dbj|BAJ30828.1| hypothetical protein KSE_50500 [Kit... 226 2e-57
gi|296140403|ref|YP_003647646.1| hypothetical protein Tpau_2709 ... 226 2e-57
gi|262203565|ref|YP_003274773.1| hypothetical protein Gbro_3696 ... 224 9e-57
gi|226309049|ref|YP_002769009.1| hypothetical protein RER_55620 ... 224 1e-56
gi|229491726|ref|ZP_04385547.1| conserved hypothetical protein [... 223 2e-56
gi|297202469|ref|ZP_06919866.1| conserved hypothetical protein [... 221 1e-55
gi|296395004|ref|YP_003659888.1| hypothetical protein Srot_2622 ... 220 2e-55
gi|317508909|ref|ZP_07966546.1| hypothetical protein HMPREF9336_... 214 1e-53
gi|256390465|ref|YP_003112029.1| hypothetical protein Caci_1263 ... 210 1e-52
gi|258653575|ref|YP_003202731.1| hypothetical protein Namu_3414 ... 200 1e-49
gi|256390547|ref|YP_003112111.1| hypothetical protein Caci_1347 ... 198 7e-49
gi|337763406|emb|CCB72114.1| conserved membrane protein of unkno... 134 1e-29
gi|21673336|ref|NP_661401.1| hypothetical protein CT0501 [Chloro... 64.3 2e-08
gi|302038933|ref|YP_003799255.1| hypothetical protein NIDE3652 [... 60.5 3e-07
gi|193213035|ref|YP_001998988.1| hypothetical protein Cpar_1387 ... 60.1 3e-07
gi|53802625|ref|YP_112656.1| hypothetical protein MCA0117 [Methy... 59.3 5e-07
gi|196230053|ref|ZP_03128916.1| conserved hypothetical protein [... 57.8 2e-06
gi|223935570|ref|ZP_03627486.1| membrane protein-like protein [b... 56.2 5e-06
gi|186686184|ref|YP_001869380.1| hypothetical protein Npun_R6151... 55.5 7e-06
gi|225872744|ref|YP_002754201.1| hypothetical protein ACP_1096 [... 55.5 7e-06
gi|116624887|ref|YP_827043.1| hypothetical protein Acid_5811 [Ca... 55.5 7e-06
gi|186687171|ref|YP_001870314.1| hypothetical protein Npun_BR141... 55.5 8e-06
gi|189423153|ref|YP_001950330.1| membrane protein [Geobacter lov... 54.7 1e-05
gi|148262104|ref|YP_001228810.1| hypothetical protein Gura_0019 ... 53.1 3e-05
gi|94970513|ref|YP_592561.1| membrane protein [Candidatus Koriba... 52.8 4e-05
gi|298506710|gb|ADI85433.1| conserved hypothetical protein [Geob... 52.4 7e-05
gi|335042585|ref|ZP_08535612.1| hypothetical protein MAMP_02075 ... 52.4 7e-05
gi|254445841|ref|ZP_05059317.1| hypothetical protein VDG1235_408... 52.0 8e-05
gi|39997774|ref|NP_953725.1| hypothetical protein GSU2680 [Geoba... 52.0 8e-05
gi|220907899|ref|YP_002483210.1| hypothetical protein Cyan7425_2... 52.0 1e-04
>gi|15607232|ref|NP_214604.1| hypothetical protein Rv0090 [Mycobacterium tuberculosis H37Rv]
gi|15839470|ref|NP_334507.1| hypothetical protein MT0099 [Mycobacterium tuberculosis CDC1551]
gi|31791268|ref|NP_853761.1| hypothetical protein Mb0093 [Mycobacterium bovis AF2122/97]
60 more sequence titles
Length=256
Score = 504 bits (1298), Expect = 4e-141, Method: Compositional matrix adjust.
Identities = 255/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+AKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ
Sbjct 1 MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR
Sbjct 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG
Sbjct 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE
Sbjct 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
Query 241 RRGEQLLDLERAAMLT 256
RRGEQLLDLERAAMLT
Sbjct 241 RRGEQLLDLERAAMLT 256
>gi|289441459|ref|ZP_06431203.1| membrane protein [Mycobacterium tuberculosis T46]
gi|289567980|ref|ZP_06448207.1| membrane protein [Mycobacterium tuberculosis T17]
gi|289748559|ref|ZP_06507937.1| membrane protein [Mycobacterium tuberculosis T92]
gi|289756152|ref|ZP_06515530.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289414378|gb|EFD11618.1| membrane protein [Mycobacterium tuberculosis T46]
gi|289541733|gb|EFD45382.1| membrane protein [Mycobacterium tuberculosis T17]
gi|289689146|gb|EFD56575.1| membrane protein [Mycobacterium tuberculosis T92]
gi|289696739|gb|EFD64168.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=256
Score = 502 bits (1292), Expect = 2e-140, Method: Compositional matrix adjust.
Identities = 254/256 (99%), Positives = 255/256 (99%), Gaps = 0/256 (0%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+AKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ
Sbjct 1 MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR
Sbjct 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAY VLQAVEGVGLWLLKRWG
Sbjct 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYPVLQAVEGVGLWLLKRWG 180
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE
Sbjct 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
Query 241 RRGEQLLDLERAAMLT 256
RRGEQLLDLERAAMLT
Sbjct 241 RRGEQLLDLERAAMLT 256
>gi|339630174|ref|YP_004721816.1| hypothetical protein MAF_00910 [Mycobacterium africanum GM041182]
gi|339329530|emb|CCC25165.1| putative membrane protein [Mycobacterium africanum GM041182]
Length=256
Score = 501 bits (1290), Expect = 4e-140, Method: Compositional matrix adjust.
Identities = 254/256 (99%), Positives = 255/256 (99%), Gaps = 0/256 (0%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+AKNQNRIRNRWELITC LGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ
Sbjct 1 MAKNQNRIRNRWELITCVLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR
Sbjct 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG
Sbjct 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE
Sbjct 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
Query 241 RRGEQLLDLERAAMLT 256
RRGEQLLDLERAAMLT
Sbjct 241 RRGEQLLDLERAAMLT 256
>gi|340625127|ref|YP_004743579.1| hypothetical protein MCAN_00941 [Mycobacterium canettii CIPT
140010059]
gi|340003317|emb|CCC42435.1| putative membrane protein [Mycobacterium canettii CIPT 140010059]
Length=256
Score = 448 bits (1152), Expect = 4e-124, Method: Compositional matrix adjust.
Identities = 250/256 (98%), Positives = 253/256 (99%), Gaps = 0/256 (0%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+AKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ
Sbjct 1 MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRGAPEDAPLIMRGKALRQA IIRALGVERLVRALV+ALAAWAVWEFRGARGAIQATLDR
Sbjct 61 GRGAPEDAPLIMRGKALRQASIIRALGVERLVRALVVALAAWAVWEFRGARGAIQATLDR 120
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG
Sbjct 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATSIFLPLE+HDLAKGITTTRVVTFSINVAAV YLLISKRLFGVRGGRKAYD E
Sbjct 181 EYFAVVATSIFLPLEIHDLAKGITTTRVVTFSINVAAVGYLLISKRLFGVRGGRKAYDAE 240
Query 241 RRGEQLLDLERAAMLT 256
RRGEQLLDLERAAMLT
Sbjct 241 RRGEQLLDLERAAMLT 256
>gi|289747857|ref|ZP_06507235.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289760189|ref|ZP_06519567.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294995708|ref|ZP_06801399.1| hypothetical protein Mtub2_14678 [Mycobacterium tuberculosis
210]
7 more sequence titles
Length=253
Score = 436 bits (1122), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 252/256 (99%), Positives = 253/256 (99%), Gaps = 3/256 (1%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+AKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ
Sbjct 1 MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR
Sbjct 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG
Sbjct 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLF GGRKAYDVE
Sbjct 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLF---GGRKAYDVE 237
Query 241 RRGEQLLDLERAAMLT 256
RRGEQLLDLERAAMLT
Sbjct 238 RRGEQLLDLERAAMLT 253
>gi|240168042|ref|ZP_04746701.1| hypothetical protein MkanA1_01912 [Mycobacterium kansasii ATCC
12478]
Length=256
Score = 424 bits (1090), Expect = 6e-117, Method: Compositional matrix adjust.
Identities = 210/254 (83%), Positives = 225/254 (89%), Gaps = 0/254 (0%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+AK + R NRWELI C + GH TYAPDD ALA RL A+T LG+VWRCLRCGDF LG P
Sbjct 1 MAKRETRGVNRWELIACAVSGHATYAPDDEALADRLSATTKLGDVWRCLRCGDFTLGEPH 60
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRG PEDAPLIMRGKALRQAIIIR L VERL RA+VL LAAWAVWEFRGARGAIQATLDR
Sbjct 61 GRGRPEDAPLIMRGKALRQAIIIRVLAVERLFRAVVLGLAAWAVWEFRGARGAIQATLDR 120
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLPV RAAGFKVDQM+ IH LEKALAAKPSTLALIT MLAAYAVLQ VEGVGLWLLKRWG
Sbjct 121 DLPVFRAAGFKVDQMSAIHELEKALAAKPSTLALITFMLAAYAVLQVVEGVGLWLLKRWG 180
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATS+FLPLE+HDL KGIT TRVVTF+IN+AAV+YLLISKRLFG+RGGR+AY+ E
Sbjct 181 EYFAVVATSLFLPLEIHDLTKGITMTRVVTFTINMAAVLYLLISKRLFGLRGGRQAYEEE 240
Query 241 RRGEQLLDLERAAM 254
R GEQLLDLERAAM
Sbjct 241 RHGEQLLDLERAAM 254
>gi|183980279|ref|YP_001848570.1| hypothetical protein MMAR_0246 [Mycobacterium marinum M]
gi|183173605|gb|ACC38715.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=276
Score = 422 bits (1086), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 210/256 (83%), Positives = 224/256 (88%), Gaps = 0/256 (0%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
V K ++ NRWEL+ C + GH TYAPDD ALA RL A T LGEVWRCLRCGDF LG P+
Sbjct 21 VTKREDHGVNRWELLVCSVTGHATYAPDDRALADRLSADTELGEVWRCLRCGDFTLGAPR 80
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRG PEDAPLIMRGKALRQAIIIR L VERL RA+VL LAAWAVWEFRGARGAIQ TLDR
Sbjct 81 GRGHPEDAPLIMRGKALRQAIIIRTLAVERLFRAMVLGLAAWAVWEFRGARGAIQTTLDR 140
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLP+ RAAGFKVDQM V+ LEKALAAKPSTLALIT MLAAYAVLQ VEGVGLWLLKRWG
Sbjct 141 DLPIFRAAGFKVDQMFVVQELEKALAAKPSTLALITFMLAAYAVLQVVEGVGLWLLKRWG 200
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATS+FLPLE+HDLA+GIT TRVVTFSINVAAV+YLLISKRLFG+RGGRKAYD E
Sbjct 201 EYFAVVATSVFLPLEIHDLARGITMTRVVTFSINVAAVLYLLISKRLFGLRGGRKAYDEE 260
Query 241 RRGEQLLDLERAAMLT 256
GEQLLDLERAAM+T
Sbjct 261 LHGEQLLDLERAAMVT 276
>gi|118619906|ref|YP_908238.1| hypothetical protein MUL_4867 [Mycobacterium ulcerans Agy99]
gi|118572016|gb|ABL06767.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=256
Score = 410 bits (1054), Expect = 9e-113, Method: Compositional matrix adjust.
Identities = 204/256 (80%), Positives = 221/256 (87%), Gaps = 0/256 (0%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+ K ++ NRWEL+ C + GH TYAPDD ALA R A T LGEVWRCLRCGDF LG P+
Sbjct 1 MTKREDHGVNRWELLVCSVTGHATYAPDDRALADRPSADTELGEVWRCLRCGDFTLGAPR 60
Query 61 GRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDR 120
GRG PEDAPLIMRGKALRQAIIIR L VERL RA+VL LAAWAVW+FRGARGAIQ TLDR
Sbjct 61 GRGHPEDAPLIMRGKALRQAIIIRTLAVERLFRAMVLRLAAWAVWDFRGARGAIQTTLDR 120
Query 121 DLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWG 180
DLP+ RAAGFKVDQ+ V+ LEKALAAKPSTLALIT MLAA AVLQ VEGVGLWLLKRWG
Sbjct 121 DLPIFRAAGFKVDQVFVVQELEKALAAKPSTLALITSMLAACAVLQVVEGVGLWLLKRWG 180
Query 181 EYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVE 240
EYFAVVATS+FLPLE+HDLA+GIT TRVVTFSINVA V+YLLISKRLFG+RGGRKAYD E
Sbjct 181 EYFAVVATSVFLPLEIHDLARGITMTRVVTFSINVAVVLYLLISKRLFGLRGGRKAYDEE 240
Query 241 RRGEQLLDLERAAMLT 256
GEQLLDLERAAM+T
Sbjct 241 LHGEQLLDLERAAMVT 256
>gi|118466013|ref|YP_884348.1| hypothetical protein MAV_5234 [Mycobacterium avium 104]
gi|254777579|ref|ZP_05219095.1| hypothetical protein MaviaA2_23321 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167300|gb|ABK68197.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=254
Score = 400 bits (1028), Expect = 9e-110, Method: Compositional matrix adjust.
Identities = 194/249 (78%), Positives = 220/249 (89%), Gaps = 0/249 (0%)
Query 5 QNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGA 64
++R NRWEL+TC L GH TYAPD+ ALA RL +TGLG+VWRCLRCG+F +G RG
Sbjct 3 KDRGLNRWELVTCALAGHATYAPDEPALADRLSGTTGLGQVWRCLRCGEFTVGPAHRRGP 62
Query 65 PEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPV 124
EDAP+IMRGKALRQAIIIR L VERL RALV+ALAA+AVW+FRGARGAIQATLDRDLP+
Sbjct 63 AEDAPMIMRGKALRQAIIIRVLAVERLFRALVIALAAYAVWKFRGARGAIQATLDRDLPI 122
Query 125 LRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFA 184
RAAGFKVDQMT++H LEKALA KPSTLAL+T ML YA+++ VEGVGLWLLKRWGEYFA
Sbjct 123 FRAAGFKVDQMTIVHELEKALATKPSTLALLTLMLVGYALVEVVEGVGLWLLKRWGEYFA 182
Query 185 VVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGE 244
V+ATS+FLPLE+HDLAKGIT TRVVTF+INVAAV+YLLISKRLFG+RGGR AYD ERRGE
Sbjct 183 VIATSVFLPLEIHDLAKGITMTRVVTFAINVAAVIYLLISKRLFGLRGGRAAYDAERRGE 242
Query 245 QLLDLERAA 253
QLLD+ERAA
Sbjct 243 QLLDVERAA 251
>gi|336459982|gb|EGO38894.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=254
Score = 398 bits (1023), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 193/249 (78%), Positives = 219/249 (88%), Gaps = 0/249 (0%)
Query 5 QNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGA 64
++R NRWEL+TC L GH TYAPD+ ALA RL +TGL +VWRCLRCG+F +G RG
Sbjct 3 KDRGLNRWELVTCALAGHATYAPDEPALAHRLSGTTGLDQVWRCLRCGEFTVGPAHRRGP 62
Query 65 PEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPV 124
EDAP+IMRGKALRQAIIIR L VERL RALV+ALAA+AVW+FRGARGAIQATLDRDLP+
Sbjct 63 AEDAPMIMRGKALRQAIIIRVLAVERLFRALVIALAAYAVWKFRGARGAIQATLDRDLPI 122
Query 125 LRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFA 184
RAAGFKVDQMT++H LEKALA KPSTLAL+T ML YA+++ VEGVGLWLLKRWGEYFA
Sbjct 123 FRAAGFKVDQMTIVHELEKALATKPSTLALLTLMLVGYALVEVVEGVGLWLLKRWGEYFA 182
Query 185 VVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGE 244
V+ATS+FLPLE+HDLAKGIT TRVVTF+INVAAV+YLLISKRLFG+RGGR AYD ERRGE
Sbjct 183 VIATSVFLPLEIHDLAKGITMTRVVTFAINVAAVIYLLISKRLFGLRGGRAAYDAERRGE 242
Query 245 QLLDLERAA 253
QLLD+ERAA
Sbjct 243 QLLDVERAA 251
>gi|342859515|ref|ZP_08716169.1| hypothetical protein MCOL_11563 [Mycobacterium colombiense CECT
3035]
gi|342133756|gb|EGT86959.1| hypothetical protein MCOL_11563 [Mycobacterium colombiense CECT
3035]
Length=259
Score = 397 bits (1019), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 200/250 (80%), Positives = 224/250 (90%), Gaps = 1/250 (0%)
Query 4 NQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRG 63
Q+R NRWEL+TC + GHVTYAPDD +LA RL TGLGEVWRCLRCG+F +G P GRG
Sbjct 8 KQHR-HNRWELVTCAVAGHVTYAPDDKSLADRLSGRTGLGEVWRCLRCGEFTVGEPHGRG 66
Query 64 APEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLP 123
EDAP+IMRGKALRQAIIIR L VERL RA+V+ALAA+AVW+FRGARGAIQATLDRDLP
Sbjct 67 RAEDAPMIMRGKALRQAIIIRILAVERLFRAVVIALAAYAVWKFRGARGAIQATLDRDLP 126
Query 124 VLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYF 183
+ R AGFKVDQMT++H LEKALAAKPSTLAL+T MLA YA+L+ VEGVGLWLLKRWGEYF
Sbjct 127 IFRTAGFKVDQMTIVHELEKALAAKPSTLALLTLMLAGYALLEVVEGVGLWLLKRWGEYF 186
Query 184 AVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRG 243
AV+ATS+FLPLEVHDLAKGIT TRVVTFSINVAAV+YLL+SKRLFG+RGGRKAYD ERRG
Sbjct 187 AVIATSVFLPLEVHDLAKGITMTRVVTFSINVAAVIYLLVSKRLFGLRGGRKAYDEERRG 246
Query 244 EQLLDLERAA 253
EQLLD+E+AA
Sbjct 247 EQLLDVEKAA 256
>gi|254820555|ref|ZP_05225556.1| hypothetical protein MintA_11541 [Mycobacterium intracellulare
ATCC 13950]
Length=254
Score = 395 bits (1016), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 204/252 (81%), Positives = 227/252 (91%), Gaps = 0/252 (0%)
Query 5 QNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGA 64
+ R NRWEL+TC L GHVTYAPDD ALA RL +TGLGEVWRCLRCG+F +G P GRG
Sbjct 3 KERGLNRWELVTCALAGHVTYAPDDHALAQRLSGTTGLGEVWRCLRCGEFTVGPPHGRGH 62
Query 65 PEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPV 124
EDAP+IMRGKALRQAIIIRAL VERL RA+V+ LAA+AVW+FRGARGAIQATLDRDLP+
Sbjct 63 AEDAPMIMRGKALRQAIIIRALAVERLFRAVVIVLAAYAVWKFRGARGAIQATLDRDLPI 122
Query 125 LRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFA 184
RAAGFKVDQMT++H LEKALAAKPSTLAL+T MLAAYA+L+ VEGVGLWLLKRWGEYFA
Sbjct 123 FRAAGFKVDQMTIVHELEKALAAKPSTLALLTLMLAAYALLEVVEGVGLWLLKRWGEYFA 182
Query 185 VVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGE 244
V+ATS+FLPLE+HDLAKGIT TRVVTF+INVAAV+YLLISKRLFG+RGGRKAYD ERRGE
Sbjct 183 VIATSVFLPLEIHDLAKGITMTRVVTFTINVAAVIYLLISKRLFGLRGGRKAYDEERRGE 242
Query 245 QLLDLERAAMLT 256
QLLD+ERAA T
Sbjct 243 QLLDVERAAART 254
>gi|296167238|ref|ZP_06849643.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897414|gb|EFG77015.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=254
Score = 378 bits (971), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 196/249 (79%), Positives = 223/249 (90%), Gaps = 0/249 (0%)
Query 5 QNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGA 64
+++ NRWEL+TC + GH TYAPD+ LAARL +TGLGEVWRCLRCG+F +G P GRG
Sbjct 3 KDQGSNRWELVTCAVAGHATYAPDEEDLAARLSGTTGLGEVWRCLRCGEFTVGEPHGRGR 62
Query 65 PEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPV 124
PEDAP+IMRGKALRQAIIIRAL VERL RA+ +ALAA+AVW+FRGARGAIQATLDRDLP+
Sbjct 63 PEDAPMIMRGKALRQAIIIRALAVERLFRAVAIALAAYAVWKFRGARGAIQATLDRDLPI 122
Query 125 LRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFA 184
RAAGFKVDQMT +H LEKALAAKPSTLAL+T MLA YA+L+ VEGVGLWLLKRWGEYFA
Sbjct 123 FRAAGFKVDQMTAVHELEKALAAKPSTLALLTLMLAGYALLEVVEGVGLWLLKRWGEYFA 182
Query 185 VVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGE 244
V+ATS+FLPLE+HDLAKGIT TRVVTF+INVAAV+YLL SKRLFG+RGGR AYD ERRGE
Sbjct 183 VIATSVFLPLEIHDLAKGITMTRVVTFTINVAAVLYLLFSKRLFGLRGGRAAYDEERRGE 242
Query 245 QLLDLERAA 253
QLLD+E+AA
Sbjct 243 QLLDVEKAA 251
>gi|86742415|ref|YP_482815.1| hypothetical protein Francci3_3735 [Frankia sp. CcI3]
gi|86569277|gb|ABD13086.1| putative membrane protein [Frankia sp. CcI3]
Length=272
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/249 (52%), Positives = 163/249 (66%), Gaps = 4/249 (1%)
Query 9 RNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDA 68
R WEL TC GHVTY PD+ +LA RL A T +G WRCLRCGDF +G P G EDA
Sbjct 3 RMNWELRTCARKGHVTYRPDETSLAERLTARTAVGVSWRCLRCGDFVVGEPALSGPAEDA 62
Query 69 PLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAA 128
PL++RG+ALR A ++R L VER++RAL++ L +A+ FR + G +Q DR +P R
Sbjct 63 PLLLRGRALRDATVLRLLAVERILRALLMVLIGYAILRFRRSEGQLQQLFDRAVPAARPL 122
Query 129 G----FKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFA 184
+D I L L +P TL L+ +L YA +Q VEG+GLWLLKRWGEYFA
Sbjct 123 ADVLRLDLDHSPTIDRLHHLLHTRPHTLLLVALLLFGYAAVQVVEGIGLWLLKRWGEYFA 182
Query 185 VVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGE 244
VATS FLPLE+++L + IT R+ INV AVVYL++SKRLF VRGG A++ ER E
Sbjct 183 AVATSAFLPLEIYELTERITVLRIGALVINVGAVVYLIVSKRLFRVRGGAAAFEAERHAE 242
Query 245 QLLDLERAA 253
LL++E +A
Sbjct 243 SLLEVEHSA 251
>gi|111225304|ref|YP_716098.1| hypothetical protein FRAAL5957 [Frankia alni ACN14a]
gi|111152836|emb|CAJ64582.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length=299
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/249 (50%), Positives = 163/249 (66%), Gaps = 4/249 (1%)
Query 8 IRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPED 67
+R WEL C GH TY PD+ LA RL A T +G WRCLRCG+F +G P G +D
Sbjct 14 MRVDWELRACARKGHATYRPDEPELAERLTARTAVGVSWRCLRCGNFVVGEPALGGPAQD 73
Query 68 APLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRA 127
AP+++RG+ALR A ++R L VERLVRAL++ L +A+ FR + A+Q DR +P R
Sbjct 74 APVLLRGRALRDATVLRLLAVERLVRALLMVLIGYAILRFRRSEDAVQRLFDRAVPAARP 133
Query 128 AG----FKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYF 183
+D + L L +P TL L+ +L YA +Q VEG+GLWLLKRWGEYF
Sbjct 134 LADVLHLDLDHSPTVEHLHHLLYTRPRTLLLVAVLLFGYAAVQIVEGIGLWLLKRWGEYF 193
Query 184 AVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRG 243
AVVATS FLPLE+++L + IT R+ +N+ AVVYL+ SKRLFGVRGG KA++ ER
Sbjct 194 AVVATSAFLPLEIYELTERITVLRIGALVVNLGAVVYLVASKRLFGVRGGVKAFEAERHA 253
Query 244 EQLLDLERA 252
E LL++++A
Sbjct 254 ESLLEVQQA 262
>gi|297154411|gb|ADI04123.1| hypothetical protein SBI_01002 [Streptomyces bingchenggensis
BCW-1]
Length=257
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/246 (51%), Positives = 164/246 (67%), Gaps = 4/246 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
W TC GHVTYAP + L RL A+T +GE WRCLRCGDFALG P G G DAPL+
Sbjct 5 WNRRTCARRGHVTYAPTEDELRERLYATTAMGEAWRCLRCGDFALGAPHGSGPAADAPLV 64
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDL----PVLRA 127
RGKALR I++R + ER+VR L + LAA AVW FR +R A++ +L PV R
Sbjct 65 ARGKALRDLIVMRFIAAERIVRGLFVLLAAVAVWRFRNSRTAVRRLFQENLTVFRPVARH 124
Query 128 AGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
+ +D V + K + STL ++ LAAYA ++ VEGVGLWLLKRW EY AVVA
Sbjct 125 FHYDLDHSPVADTIRKTFEYRHSTLVIVAAALAAYAAIEIVEGVGLWLLKRWAEYLAVVA 184
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
T+ FLPLE+++LA+ I+ ++ T +N+ AV+Y+L+SKRLFG+RGGR A++ ER LL
Sbjct 185 TAAFLPLEIYELAEKISWLKIATLVVNILAVLYILLSKRLFGLRGGRAAFEAERHSASLL 244
Query 248 DLERAA 253
++E AA
Sbjct 245 EVEAAA 250
>gi|294631466|ref|ZP_06710026.1| membrane protein [Streptomyces sp. e14]
gi|292834799|gb|EFF93148.1| membrane protein [Streptomyces sp. e14]
Length=254
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/246 (48%), Positives = 161/246 (66%), Gaps = 4/246 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
W+ TC GHVTYAPDD L RL A T LGEVWRCLRCGDF LG P G G +APL+
Sbjct 5 WDRRTCARKGHVTYAPDDPRLRIRLHADTALGEVWRCLRCGDFVLGDPHGSGPAAEAPLV 64
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDL----PVLRA 127
RGK LR ++R L VER VR + + L A AVW F ++ A++ + L PV +
Sbjct 65 PRGKVLRDLFVLRFLAVERAVRGVFIVLVAVAVWRFSNSQDAVRRLFEEYLDVLRPVFKH 124
Query 128 AGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
+ +D V+ ++K K STL L+ G+L AYA+++ +E VGLW KRW EY VVA
Sbjct 125 FHYDLDHSPVVGTIQKTFGYKHSTLLLVVGLLLAYALVEIIEAVGLWYAKRWAEYLTVVA 184
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
T+ FLPLE+++L + I+ ++ T +N+ AV+Y+ ++KRLFG+RGGR+A+D ERR LL
Sbjct 185 TAAFLPLEIYELTEHISALKITTLVLNILAVLYIAVTKRLFGLRGGRRAFDEERRSASLL 244
Query 248 DLERAA 253
++E +A
Sbjct 245 EVEESA 250
>gi|337768207|emb|CCB76920.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=260
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/243 (48%), Positives = 165/243 (68%), Gaps = 4/243 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
W TC GHVTYAPD+A L RL A TGLG+ WRCLRCGDF +G P G G + AP++
Sbjct 5 WNRRTCARRGHVTYAPDEAHLRERLHAVTGLGDAWRCLRCGDFTVGAPHGTGPADRAPVV 64
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAAG-- 129
RG+ALR +I+R L VER+VR L + LAA AVW+F +R A++ +++L V R
Sbjct 65 PRGRALRDLLILRFLAVERVVRGLFIVLAAVAVWKFSNSRTAVRQFFEQNLTVFRPVAAH 124
Query 130 --FKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
+ +D V+ + K K STL ++ L AYA+++ VEG GLW +RW EY VVA
Sbjct 125 FHYDLDHSPVVDTIRKTFDYKHSTLLVVAAALLAYALIEIVEGAGLWFARRWAEYLTVVA 184
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
T+ FLPLEV++L + ++ ++ T ++NV AV+Y+L++KRLFG+RGG +A++ ERRG+ LL
Sbjct 185 TAAFLPLEVYELTEKVSGLKIATLALNVLAVLYILLAKRLFGLRGGARAFEAERRGDSLL 244
Query 248 DLE 250
++E
Sbjct 245 EVE 247
>gi|312199378|ref|YP_004019439.1| hypothetical protein FraEuI1c_5584 [Frankia sp. EuI1c]
gi|311230714|gb|ADP83569.1| hypothetical protein FraEuI1c_5584 [Frankia sp. EuI1c]
Length=260
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/232 (49%), Positives = 154/232 (67%), Gaps = 4/232 (1%)
Query 23 VTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMRGKALRQAII 82
+TY PD+ LA RLR T G WRCLRCGDF +G P G G ++AP+++RG+ALR A++
Sbjct 1 MTYRPDETELATRLRVETAAGVAWRCLRCGDFTIGEPLGGGPADEAPVLLRGRALRDAMV 60
Query 83 IRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAAG----FKVDQMTVI 138
+R L +ERLVRA++L L +A+ +FR ++ + DR LP + +D +
Sbjct 61 LRLLALERLVRAVLLVLIGYAILQFRHSQAQAEDLFDRALPAAKPLADVLHLDLDSSPTV 120
Query 139 HALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHD 198
L + +P TL L+ ++ YA +Q EGVGLWLLKRWGEYFAVVATSIFLPLEV++
Sbjct 121 THLRHLIYTQPKTLLLVAVLMFGYAAIQVAEGVGLWLLKRWGEYFAVVATSIFLPLEVYE 180
Query 199 LAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDLE 250
L + IT RV +IN+ AVVYL+ SKRLFGVRGG A++ ER LL+++
Sbjct 181 LTEHITWLRVAALAINIGAVVYLVASKRLFGVRGGHAAFEAERHSASLLEVD 232
>gi|169629675|ref|YP_001703324.1| hypothetical protein MAB_2589c [Mycobacterium abscessus ATCC
19977]
gi|169241642|emb|CAM62670.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=257
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/245 (49%), Positives = 164/245 (67%), Gaps = 4/245 (1%)
Query 14 LITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMR 73
L +CGL GH T+ PD+ L RLR ST +GE WRCLRC F +G P+ RG + AP + R
Sbjct 6 LRSCGLRGHATFDPDEQPLRERLRVSTPVGEAWRCLRCETFVVGTPRYRGPADTAPEVPR 65
Query 74 GKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRA----AG 129
G+ LR ++R L VER+VR LV L A V + RG+R +Q ++D+P++R G
Sbjct 66 GRLLRDRTLMRVLAVERVVRGLVFVLLAVVVVKVRGSREHLQRVFEQDIPLIRPLANQIG 125
Query 130 FKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATS 189
+ D +IH + +A + +TL + LAAYA ++ +E +GLWL+KRWGEYFAV+ATS
Sbjct 126 WNPDNSKIIHHIGQAFSLSSTTLLWVAVGLAAYASIEFIEAIGLWLMKRWGEYFAVIATS 185
Query 190 IFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDL 249
IFLPLE+++L + +T RV+ +N+ AVV+LL SKRLFG+ GG KAY+ E R E LL +
Sbjct 186 IFLPLEIYELIEKVTVLRVLALLVNIVAVVWLLWSKRLFGLNGGGKAYEREHRAESLLSV 245
Query 250 ERAAM 254
ERAA+
Sbjct 246 ERAAL 250
>gi|311898420|dbj|BAJ30828.1| hypothetical protein KSE_50500 [Kitasatospora setae KM-6054]
Length=258
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/250 (46%), Positives = 161/250 (65%), Gaps = 4/250 (1%)
Query 8 IRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPED 67
++ W+ TC GH+TYAPD+ L ARL +T +G WRCLRCGDFALG P G G E+
Sbjct 2 LKRDWDRHTCAKRGHITYAPDEPDLRARLHTATAVGTAWRCLRCGDFALGEPHGSGPAEE 61
Query 68 APLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDL----P 123
APL+ RGKALR I+R L VERL+R L++ + AW VW+F +R A++ D +L P
Sbjct 62 APLVPRGKALRDLFILRFLAVERLLRGLLIVVVAWGVWKFSNSRDAVRRIFDENLTVFKP 121
Query 124 VLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYF 183
V F ++ ++ + K K STL + L YA+++ VE GLW RW EY
Sbjct 122 VTDHFHFDLEHSPIVDTVRKTFEYKHSTLVYVAVALVVYALVEIVEAFGLWWGHRWAEYL 181
Query 184 AVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRG 243
VVAT+ FLPLEV++L + ++ ++ T +N+AAV+++++SKRLFG+RGGR A++ ER
Sbjct 182 TVVATAAFLPLEVYELTEHVSALKIGTLLLNIAAVLWIMLSKRLFGLRGGRAAFEAERHS 241
Query 244 EQLLDLERAA 253
LL++E AA
Sbjct 242 ASLLEVESAA 251
>gi|296140403|ref|YP_003647646.1| hypothetical protein Tpau_2709 [Tsukamurella paurometabola DSM
20162]
gi|296028537|gb|ADG79307.1| Protein of unknown function DUF2068, transmembrane [Tsukamurella
paurometabola DSM 20162]
Length=249
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/243 (48%), Positives = 159/243 (66%), Gaps = 4/243 (1%)
Query 14 LITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMR 73
++ CG+ GHVTYAPD+ L R+ A T G WRCLRC D+ +G P G G +AP + R
Sbjct 5 VLWCGVRGHVTYAPDEGDLRGRIHAETPEGSAWRCLRCDDYVVGEPVGSGPAAEAPTVPR 64
Query 74 GKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRA----AG 129
G+ALR +I+R L VER +R LV A +AVW+ R +RG ++ D +LPVLRA G
Sbjct 65 GRALRDELIMRFLAVERFLRGLVFVAAGFAVWKVRDSRGHLREIFDSELPVLRALGEQLG 124
Query 130 FKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATS 189
+ D +I AL++AL +TL + L AYAV++ VE VGLW RWGEYFAV+ATS
Sbjct 125 WNPDDSRIIRALDQALDLSGTTLLWVAAGLFAYAVIEFVEAVGLWRGARWGEYFAVIATS 184
Query 190 IFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDL 249
FLPLE++++++ +T R +N+AAV +LL SKRLFG+ GG +AY ER+ E +L +
Sbjct 185 AFLPLEIYEISEKVTVLRAGALLVNIAAVAWLLWSKRLFGLNGGAEAYYAERQSESVLTV 244
Query 250 ERA 252
RA
Sbjct 245 RRA 247
>gi|262203565|ref|YP_003274773.1| hypothetical protein Gbro_3696 [Gordonia bronchialis DSM 43247]
gi|262086912|gb|ACY22880.1| Protein of unknown function DUF2068, transmembrane [Gordonia
bronchialis DSM 43247]
Length=253
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 112/247 (46%), Positives = 158/247 (64%), Gaps = 4/247 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
WEL++CGL GH TYAPD+AALAARL T GE WRCLRCG F G P+ G + AP +
Sbjct 3 WELLSCGLRGHETYAPDEAALAARLHVDTPAGESWRCLRCGTFVPGEPRRSGPADHAPEV 62
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRA---- 127
RG LR +I+R L ER VR L L A V R + +I+ + ++P+LR
Sbjct 63 PRGALLRDLVIMRLLAAERAVRGLFLLAARIIVISLRHRQESIRTKFESEMPLLRPLADQ 122
Query 128 AGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
G+ +D V+ +E++ + +T+ + L AYA Q +E GLW ++RWGEYFAV+
Sbjct 123 IGWNIDDSKVVEWIERSFSLSSTTIVWVGTALIAYAASQFIEAGGLWFMRRWGEYFAVIV 182
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
T++FLP+E+++L + +T R++ ++N+AAVV+L+ SKRLFGVRGG AY E E LL
Sbjct 183 TTLFLPIEIYELTERVTVVRILLLAVNLAAVVWLIWSKRLFGVRGGGDAYHAEHHAESLL 242
Query 248 DLERAAM 254
+ERAA+
Sbjct 243 TVERAAV 249
>gi|226309049|ref|YP_002769009.1| hypothetical protein RER_55620 [Rhodococcus erythropolis PR4]
gi|226188166|dbj|BAH36270.1| hypothetical protein RER_55620 [Rhodococcus erythropolis PR4]
Length=253
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/245 (47%), Positives = 157/245 (65%), Gaps = 4/245 (1%)
Query 14 LITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMR 73
L +C GH TYAPD+ L RL T +G+ WRCLRCG+F G P+ G + AP + R
Sbjct 5 LRSCSWHGHETYAPDEPELRDRLHVETAVGQAWRCLRCGNFVPGAPRASGPADAAPEVPR 64
Query 74 GKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAA----G 129
G+ LR +I+R L ER+ RAL L L A V + R ++G ++ + +LP++R G
Sbjct 65 GRLLRDRLIMRLLATERMFRALGLVLLAIGVLKLRSSKGRVEDAFENELPLIRPLARQLG 124
Query 130 FKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATS 189
+ +D ++H +E+A + +TL I L YA LQ +E VGLW++KRWGEYFAVVATS
Sbjct 125 WNIDDSKLVHHIEQAFSLSATTLTWIAVGLLVYAGLQVIEAVGLWMVKRWGEYFAVVATS 184
Query 190 IFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDL 249
+FLPLE+++L + IT R +NVAAVV+L+ SKRLFGVRGG AY E E LL +
Sbjct 185 LFLPLEIYELTEKITWLRAGLLLVNVAAVVWLIWSKRLFGVRGGGAAYHAEHSEESLLTV 244
Query 250 ERAAM 254
ERAA+
Sbjct 245 ERAAV 249
>gi|229491726|ref|ZP_04385547.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321407|gb|EEN87207.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=253
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/245 (47%), Positives = 157/245 (65%), Gaps = 4/245 (1%)
Query 14 LITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMR 73
L +C GH TYAPD+ L RL T +G+ WRCLRCG+F G P+ G + AP + R
Sbjct 5 LRSCSWHGHETYAPDEPELRDRLHVDTAVGQAWRCLRCGNFVPGAPRASGPADAAPEVPR 64
Query 74 GKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAA----G 129
G+ LR +I+R L ER+ RAL L L A V+E R ++G + + +LP++R G
Sbjct 65 GRLLRDRLIMRLLATERMFRALGLVLLAIGVFELRSSKGRAEDAFENELPLIRPLARQLG 124
Query 130 FKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATS 189
+ +D ++H +E+A + +TL I L YA LQ +E VGLW+++RWGEYFAVVATS
Sbjct 125 WNIDDSKLVHHIEQAFSLSATTLTWIAVGLLVYAGLQVIEAVGLWMVERWGEYFAVVATS 184
Query 190 IFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDL 249
+FLPLE+++L + IT R +N+AAVV+L+ SKRLFGVRGG AY E E LL +
Sbjct 185 LFLPLEIYELTEKITWLRAGLLLVNIAAVVWLIWSKRLFGVRGGGAAYHAEHSEESLLTV 244
Query 250 ERAAM 254
ERAA+
Sbjct 245 ERAAV 249
>gi|297202469|ref|ZP_06919866.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197710005|gb|EDY54039.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=265
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/248 (46%), Positives = 161/248 (65%), Gaps = 4/248 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
W+ TC GHVTYAPD+ L RL A T LG WRCLRCGDFALG P G G + APL+
Sbjct 5 WDRRTCARRGHVTYAPDEPRLRERLHAETALGGAWRCLRCGDFALGEPHGSGPADHAPLV 64
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDL----PVLRA 127
RGK LR ++R L +ER VR + + LAA AVW+F ++ A++ D L PV R
Sbjct 65 PRGKVLRDLFVLRFLAIERAVRGVFIVLAAVAVWKFSNSQDAVRRLFDEYLDVFRPVFRH 124
Query 128 AGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
+ +D ++ ++K K +TL L+ +L AYA+++ VE VGLW KRW EY VVA
Sbjct 125 FHYDLDHSPIVDTVQKTFGYKHNTLVLVAVLLLAYALIELVEAVGLWYAKRWAEYLTVVA 184
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
T+ FLPLE+++L + I+ ++ T +N+ AV+Y+L++KRLFG+RGG +A++ ER+ LL
Sbjct 185 TAAFLPLEIYELTERISWLKIATLFLNILAVLYILLAKRLFGLRGGHRAFEEERQSASLL 244
Query 248 DLERAAML 255
++E A L
Sbjct 245 EVEEAGGL 252
>gi|296395004|ref|YP_003659888.1| hypothetical protein Srot_2622 [Segniliparus rotundus DSM 44985]
gi|296182151|gb|ADG99057.1| Protein of unknown function DUF2068, transmembrane [Segniliparus
rotundus DSM 44985]
Length=262
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/245 (48%), Positives = 150/245 (62%), Gaps = 4/245 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
W L C GH TYAPD+ AL ARL T LGE WRCLRCGDF G P+ G + AP +
Sbjct 14 WSLRYCSWHGHETYAPDETALRARLMVMTALGEAWRCLRCGDFVPGSPRRSGPADHAPEV 73
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAA--- 128
G+ LR I+RAL VER +R++VL A+AV AR Q + DLP+L+
Sbjct 74 PHGRLLRDRWIMRALAVERWLRSVVLLAGAYAVLHLSFAREQAQRAFETDLPLLKPLAEQ 133
Query 129 -GFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
G+ + V+H + L + + I + YA LQ +EGVGLW +KRWGEYFAVVA
Sbjct 134 LGWNLGTSKVLHGISTVLGLSSAAMRWIALAVLVYAALQIIEGVGLWQVKRWGEYFAVVA 193
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
TS+FLPLEV++L + +T ++ +NV AV++L+ SKRLFGVRGG AY E E LL
Sbjct 194 TSVFLPLEVYELTERVTPLKIAALVVNVIAVLWLVWSKRLFGVRGGAAAYHAEHSAESLL 253
Query 248 DLERA 252
+ERA
Sbjct 254 TVERA 258
>gi|317508909|ref|ZP_07966546.1| hypothetical protein HMPREF9336_02918 [Segniliparus rugosus ATCC
BAA-974]
gi|316252793|gb|EFV12226.1| hypothetical protein HMPREF9336_02918 [Segniliparus rugosus ATCC
BAA-974]
Length=254
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/247 (49%), Positives = 155/247 (63%), Gaps = 4/247 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
W L C GH TYAPD+ L RL +T +GE WRCLRCGDF G P+ G + AP I
Sbjct 3 WALRYCSWHGHATYAPDETGLRERLVTATAVGEAWRCLRCGDFVPGEPRRSGPADHAPEI 62
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAA--- 128
G+ LR I+RAL VER +RALVL A+AV+ AR Q + DLP+LR
Sbjct 63 PHGRLLRDRWIMRALAVERALRALVLLGVAYAVFRLSFARERAQHEFESDLPLLRPLADQ 122
Query 129 -GFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
G+ +D+ ++H + L +T+ I + YA LQ +E VGLWL+KRWGEYFAVVA
Sbjct 123 LGWNMDKSKILHGIGTVLGLSSATMRWIGLAVVVYATLQIIEAVGLWLVKRWGEYFAVVA 182
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
TS+FLPLE+++L + +T ++ +NV AVV+L+ SKRLFGVRGG AY E E LL
Sbjct 183 TSMFLPLEIYELTEHVTPLKITALLVNVVAVVWLIWSKRLFGVRGGGAAYHAEHSAESLL 242
Query 248 DLERAAM 254
+ERAA+
Sbjct 243 TVERAAV 249
>gi|256390465|ref|YP_003112029.1| hypothetical protein Caci_1263 [Catenulispora acidiphila DSM
44928]
gi|256356691|gb|ACU70188.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=295
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/256 (46%), Positives = 157/256 (62%), Gaps = 14/256 (5%)
Query 12 WELITCGLGGHVTYAPD----DAALAARLRASTGLGEVWRCLRCGDFALGGPQ-GRGAPE 66
W C GH TYAP + LAARLR T G WRCLRCGDF +G P G G +
Sbjct 4 WNRRHCARRGHETYAPVGSGLETELAARLRVETVHGPAWRCLRCGDFVIGEPTTGSGPAD 63
Query 67 DAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDL---- 122
+AP++ RGKALR I+R L VER++R +V+ L AWAVW+F ++ A+Q + DL
Sbjct 64 EAPIVPRGKALRDLFILRLLAVERVIRGVVILLIAWAVWKFGSSQNAVQRLFESDLSAFK 123
Query 123 PVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEY 182
P G+ V+ +++ + K KP T+ + +L YA+L+ VEGVGLWL KRWGEY
Sbjct 124 PFANHFGWDVEHASIVERIRKTFDYKPKTIHTVALLLGGYALLETVEGVGLWLAKRWGEY 183
Query 183 FAVVATSIFLPLEVHDLAKGITTTR-----VVTFSINVAAVVYLLISKRLFGVRGGRKAY 237
V TSIFLPLE+ D I + + TF+INV AVVYLL++KRLFG+RGG +A+
Sbjct 184 LTAVGTSIFLPLEIWDGYTKIHEHKSYILAICTFAINVGAVVYLLLTKRLFGIRGGGEAF 243
Query 238 DVERRGEQLLDLERAA 253
+ + + L+ +E AA
Sbjct 244 EAAKHADALMTVELAA 259
>gi|258653575|ref|YP_003202731.1| hypothetical protein Namu_3414 [Nakamurella multipartita DSM
44233]
gi|258556800|gb|ACV79742.1| membrane protein-like protein [Nakamurella multipartita DSM 44233]
Length=263
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/244 (44%), Positives = 146/244 (60%), Gaps = 4/244 (1%)
Query 12 WELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLI 71
W L TCG GH T+APD+ L ARL A T G WRCLRCGDF +G P+ G AP +
Sbjct 3 WSLRTCGRRGHETFAPDEPDLRARLTAPTPAGTAWRCLRCGDFVVGAPRRSGPAGQAPEV 62
Query 72 MRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAA--- 128
RG+ LR +I+R L ER+ RAL++ L R +R ++ D +L +LR
Sbjct 63 PRGRLLRDRVIMRLLAAERVARALLIVLVGVLALHLRDSRAELRRAFDNELTLLRPVADQ 122
Query 129 -GFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVA 187
G+ ++ + + + L +T+ + L AYAVL +E GLW ++RWGEYF+VV
Sbjct 123 LGWDIEGSELTRGINRILGLSGTTINWVAVALFAYAVLLLIESYGLWRIRRWGEYFSVVV 182
Query 188 TSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLL 247
TS+FLPLE+ +L + T +VV ++NVAAV +L+ SKRLFGVRGG AY E E LL
Sbjct 183 TSVFLPLEIWELTEKFTWFKVVLTAVNVAAVAWLVWSKRLFGVRGGDAAYRAEHSEESLL 242
Query 248 DLER 251
+ER
Sbjct 243 TVER 246
>gi|256390547|ref|YP_003112111.1| hypothetical protein Caci_1347 [Catenulispora acidiphila DSM
44928]
gi|256356773|gb|ACU70270.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=268
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/266 (47%), Positives = 169/266 (64%), Gaps = 13/266 (4%)
Query 1 VAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQ 60
+ + R R W L+ C L GHV YAP + AL ARL A T G WRCLRC DF G
Sbjct 1 MTDGRKRHRFDWSLLGCALSGHVLYAPTEPALRARLTAETAGGVTWRCLRCADFVPVGSA 60
Query 61 G---------RGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGAR 111
G EDAPL+ RG +R A+++R VER +RAL+L AA+ V F G +
Sbjct 61 APGAAAPTPPSGPAEDAPLVKRGAEMRDAVLLRFFAVERWIRALLLGAAAYVVHRFAGRQ 120
Query 112 GAIQATLDRDLPVLR----AAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQA 167
++ D+ PV++ AGF + + L+KA+ A+P+TLA I LAAYAV++A
Sbjct 121 NDLRQAFDQAAPVVKQVFGKAGFDLQNSKTLELLQKAVDARPTTLAWIIAALAAYAVVEA 180
Query 168 VEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRL 227
VEGVGLWLL+RWGEYFA VAT +FLP EV++L ++ ++ TF +N+A V+YL+ +KRL
Sbjct 181 VEGVGLWLLQRWGEYFAFVATGMFLPFEVYELTHRVSPLKLGTFLLNLALVLYLVWTKRL 240
Query 228 FGVRGGRKAYDVERRGEQLLDLERAA 253
FGVRGG++AY+ +R LL++ERAA
Sbjct 241 FGVRGGKRAYEAQRHAASLLEVERAA 266
>gi|337763406|emb|CCB72114.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057]
Length=280
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/247 (39%), Positives = 129/247 (53%), Gaps = 22/247 (8%)
Query 12 WELITCGLGGH-------VTYAPDDAALAARLRASTGLGEVW-RCLRCGDFALGGPQGRG 63
+ELI CGL GH P+DA L G G W RCLRC + P
Sbjct 22 YELIGCGLHGHHLAGTGAARVRPEDAPLV-----REGDGLRWHRCLRCDAWLPLRPPEHP 76
Query 64 APEDAP------LIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQAT 117
E P + +RGK LR ++R + ++RLV LVL + A +V F R ++
Sbjct 77 EREFPPGRDEVTVPLRGKPLRDRYVLRLIALDRLVHFLVLGVLAGSVLLFVDDRARLRGP 136
Query 118 LDRDLPVLRAAGFKVDQMT---VIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLW 174
R L ++ + + L+KA AA STL +I + A YAVL+ VE VGLW
Sbjct 137 YYRILDAVQHGVGGTGGTSGHGFLGDLDKAFAAHASTLWVIGAVFAGYAVLEGVEAVGLW 196
Query 175 LLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGR 234
+RW EY VAT I L EV++L ++ T+++T IN+A VVYLLI+KRLFG+RGG
Sbjct 197 FAQRWAEYLTFVATVILLVPEVYELTGRVSATKILTLVINIAVVVYLLIAKRLFGLRGGG 256
Query 235 KAYDVER 241
+A ER
Sbjct 257 RAEQAER 263
>gi|21673336|ref|NP_661401.1| hypothetical protein CT0501 [Chlorobium tepidum TLS]
gi|21646430|gb|AAM71743.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length=238
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (33%), Positives = 63/109 (58%), Gaps = 5/109 (4%)
Query 118 LDRDLPVLRA---AGFKVDQMTVIHALEKALAAKPS--TLALITGMLAAYAVLQAVEGVG 172
+ RDLP + A + VD + + L K L + L + + A YA+++ +E G
Sbjct 112 VSRDLPGIIAEIKTRWNVDPSSHMPHLAKMLMQDLTGARLHFLIMLAAIYALMRFIEAYG 171
Query 173 LWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYL 221
LW +RW E+FA+V+ ++LP+E+++LAKG + ++ +IN+ V Y+
Sbjct 172 LWFARRWAEWFALVSGGVYLPIELYELAKGFSWLKMGILTINLIIVAYM 220
>gi|302038933|ref|YP_003799255.1| hypothetical protein NIDE3652 [Candidatus Nitrospira defluvii]
gi|300606997|emb|CBK43330.1| conserved membrane protein of unknown function [Candidatus Nitrospira
defluvii]
Length=153
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (45%), Positives = 40/61 (66%), Gaps = 0/61 (0%)
Query 162 YAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYL 221
Y+V +EG GLWL W Y AV++TS+FLP+E +++ + I+ V F +NVA + YL
Sbjct 84 YSVFLLIEGCGLWLEASWAGYMAVISTSVFLPVEFYEVLRQISLMHVTIFLLNVAILGYL 143
Query 222 L 222
L
Sbjct 144 L 144
>gi|193213035|ref|YP_001998988.1| hypothetical protein Cpar_1387 [Chlorobaculum parvum NCIB 8327]
gi|193086512|gb|ACF11788.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
Length=164
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/113 (31%), Positives = 63/113 (56%), Gaps = 5/113 (4%)
Query 114 IQATLDRDLPVLRAA---GFKVDQMTVIHALEKALAAKPS--TLALITGMLAAYAVLQAV 168
+ + RDLP + A + VD I L K L + L + + A YA+++ +
Sbjct 30 LSTFVSRDLPGILAEIKLRWHVDPSNHIPGLAKMLLHDLTGARLHFLIMLAAIYALMRFI 89
Query 169 EGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYL 221
E GLW +RW E+FA+V+ ++LP+E++++A+G + ++ +IN+ V Y+
Sbjct 90 EAYGLWFERRWAEWFALVSGGVYLPIELYEIARGFSWLKMGVLAINLIIVGYM 142
>gi|53802625|ref|YP_112656.1| hypothetical protein MCA0117 [Methylococcus capsulatus str. Bath]
gi|53756386|gb|AAU90677.1| conserved hypothetical protein [Methylococcus capsulatus str.
Bath]
Length=157
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (72%), Gaps = 0/60 (0%)
Query 162 YAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYL 221
YA+L+ +E GLW +RW E+F V + I++P E+++LA+G++ ++ T ++N+A V YL
Sbjct 78 YAMLRCIEAYGLWRGRRWAEWFGVASGGIYVPFELYELAEGVSWLKLATLAVNLAVVGYL 137
>gi|196230053|ref|ZP_03128916.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
gi|196225650|gb|EDY20157.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length=154
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (27%), Positives = 68/141 (49%), Gaps = 5/141 (3%)
Query 86 LGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAAGFKVDQMTVIHALEKAL 145
+G +L++ ++L + A + + ++AT+ +R F + L +A
Sbjct 15 IGTYKLLQGIMLVVLATGL--LKAVNHDLEATMSH---WIRELHFDPGNRYITSLLHRAG 69
Query 146 AAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITT 205
TL ++ + Y + VEG GL +RW EY + T +PLE+++LAK T
Sbjct 70 LIDDRTLKRLSSLTFTYGAVFMVEGTGLLFKQRWAEYLTTIITFSLVPLEIYELAKHFTA 129
Query 206 TRVVTFSINVAAVVYLLISKR 226
+VV +N+A +YL++ R
Sbjct 130 LKVVILLVNIAIGIYLIVMIR 150
>gi|223935570|ref|ZP_03627486.1| membrane protein-like protein [bacterium Ellin514]
gi|223895578|gb|EEF62023.1| membrane protein-like protein [bacterium Ellin514]
Length=172
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (39%), Positives = 41/63 (66%), Gaps = 0/63 (0%)
Query 161 AYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVY 220
AYA+++ EG GLW KRW E+FA ++ +++P+E++ L +T + V NV V+Y
Sbjct 86 AYAMIRIAEGYGLWYEKRWAEWFAAISAGLYIPVELYHLWHRVTWLKAVVLISNVLIVIY 145
Query 221 LLI 223
L++
Sbjct 146 LVM 148
>gi|186686184|ref|YP_001869380.1| hypothetical protein Npun_R6151 [Nostoc punctiforme PCC 73102]
gi|186468636|gb|ACC84437.1| hypothetical protein Npun_R6151 [Nostoc punctiforme PCC 73102]
Length=148
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/83 (38%), Positives = 49/83 (60%), Gaps = 2/83 (2%)
Query 141 LEKALAAKPSTLALITGMLA-AYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDL 199
L+K + P TLA +G+ A YA++ ++E VGLW KRW + I +P EV++L
Sbjct 59 LKKVINLNPRTLAF-SGIGAGVYAIITSIEAVGLWYEKRWAHVLVLGLVGISIPPEVYEL 117
Query 200 AKGITTTRVVTFSINVAAVVYLL 222
+GI+ ++ F +N+A YLL
Sbjct 118 IRGISLIKIFIFLLNLAVFGYLL 140
>gi|225872744|ref|YP_002754201.1| hypothetical protein ACP_1096 [Acidobacterium capsulatum ATCC
51196]
gi|225794190|gb|ACO34280.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
51196]
Length=179
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/74 (41%), Positives = 44/74 (60%), Gaps = 0/74 (0%)
Query 149 PSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRV 208
P L LI+ + AYA L +EG GL L K W EY ++ ++ FLP E+++L + +T +V
Sbjct 85 PHQLRLISAAIFAYAALDLIEGTGLVLEKVWAEYVTLIISAAFLPWEIYELIRRVTWFKV 144
Query 209 VTFSINVAAVVYLL 222
NV V+YLL
Sbjct 145 GLALANVLMVLYLL 158
>gi|116624887|ref|YP_827043.1| hypothetical protein Acid_5811 [Candidatus Solibacter usitatus
Ellin6076]
gi|116228049|gb|ABJ86758.1| conserved hypothetical protein [Candidatus Solibacter usitatus
Ellin6076]
Length=152
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 38/61 (63%), Gaps = 0/61 (0%)
Query 162 YAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYL 221
YA L A EG+GL L KRW EYF +V T +P+E+ +LA+ T ++V IN V YL
Sbjct 86 YAGLFATEGIGLLLRKRWAEYFTIVTTGGLIPIEIFELARHFTAAKLVVLLINALIVWYL 145
Query 222 L 222
+
Sbjct 146 V 146
>gi|186687171|ref|YP_001870314.1| hypothetical protein Npun_BR141 [Nostoc punctiforme PCC 73102]
gi|186469474|gb|ACC85273.1| hypothetical protein Npun_BR141 [Nostoc punctiforme PCC 73102]
Length=147
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/83 (34%), Positives = 49/83 (60%), Gaps = 0/83 (0%)
Query 140 ALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDL 199
+LE+ + K STL + YA++ A+E VGLW W + + SI +P E+++L
Sbjct 59 SLEEVINVKHSTLKFSGIAIGLYALVTAIESVGLWYETTWTKILVIGLVSISMPPEIYEL 118
Query 200 AKGITTTRVVTFSINVAAVVYLL 222
KG+T +++ F +N+A + YL+
Sbjct 119 IKGVTILKLLVFLVNLAGLWYLI 141
>gi|189423153|ref|YP_001950330.1| membrane protein [Geobacter lovleyi SZ]
gi|189419412|gb|ACD93810.1| membrane protein-like protein [Geobacter lovleyi SZ]
Length=211
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/63 (34%), Positives = 43/63 (69%), Gaps = 0/63 (0%)
Query 162 YAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYL 221
Y+ ++ E GLWL K+W E+F V+ +++P+E++++A+G++ +V+ + N+ V YL
Sbjct 133 YSGVRFFEAAGLWLGKKWAEWFGVLTGGMYIPVELYEVARGVSWPKVILLAGNIGVVAYL 192
Query 222 LIS 224
L +
Sbjct 193 LYT 195
>gi|148262104|ref|YP_001228810.1| hypothetical protein Gura_0019 [Geobacter uraniireducens Rf4]
gi|146395604|gb|ABQ24237.1| membrane protein-like protein [Geobacter uraniireducens Rf4]
Length=170
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (33%), Positives = 48/81 (60%), Gaps = 0/81 (0%)
Query 141 LEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLA 200
L+ A +A S L + YA+++ VE GLW + W E+F +++ S++LPLEV++L
Sbjct 81 LDAAASASDSRLWALAVAAMVYAMIRFVEAYGLWQEQVWAEWFGILSGSLYLPLEVYELT 140
Query 201 KGITTTRVVTFSINVAAVVYL 221
++ +V+ +N+ V +L
Sbjct 141 VSVSAVKVILLVVNLVIVGWL 161
>gi|94970513|ref|YP_592561.1| membrane protein [Candidatus Koribacter versatilis Ellin345]
gi|94552563|gb|ABF42487.1| membrane protein [Candidatus Koribacter versatilis Ellin345]
Length=176
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (36%), Positives = 42/73 (58%), Gaps = 0/73 (0%)
Query 149 PSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRV 208
P L ++ + YA+++ VEG GLW + W EYFA+++ + +LP EV + A+
Sbjct 84 PEKLEIVALIGVLYALIRFVEGYGLWNARTWAEYFALISGAAYLPWEVWEFARRPNWFHA 143
Query 209 VTFSINVAAVVYL 221
V IN+A V Y+
Sbjct 144 VLILINLAVVAYI 156
>gi|298506710|gb|ADI85433.1| conserved hypothetical protein [Geobacter sulfurreducens KN400]
Length=153
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/82 (37%), Positives = 45/82 (55%), Gaps = 0/82 (0%)
Query 141 LEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLA 200
LE A AA L L+ YA L+ E GLW + W E+ +V+ I+LPLEV++L
Sbjct 64 LEAADAASDGRLRLLALGAFGYASLRFTEAWGLWRARPWAEWLGIVSGGIYLPLEVYELV 123
Query 201 KGITTTRVVTFSINVAAVVYLL 222
I+ ++ TF +N+ V L+
Sbjct 124 VSISAVKIGTFLVNLIVVAVLV 145
>gi|335042585|ref|ZP_08535612.1| hypothetical protein MAMP_02075 [Methylophaga aminisulfidivorans
MP]
gi|333789199|gb|EGL55081.1| hypothetical protein MAMP_02075 [Methylophaga aminisulfidivorans
MP]
Length=150
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (32%), Positives = 45/83 (55%), Gaps = 0/83 (0%)
Query 139 HALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHD 198
H L+ + L ++T Y+ ++ VE GLW RW E+ A+V++ ++LP E+++
Sbjct 59 HLLQALADINNTKLIIVTIAALLYSFIRFVEAYGLWHQYRWTEWLALVSSVVYLPFELYE 118
Query 199 LAKGITTTRVVTFSINVAAVVYL 221
L + +T + IN VVYL
Sbjct 119 LYQKVTLLSSLLLMINTLVVVYL 141
>gi|254445841|ref|ZP_05059317.1| hypothetical protein VDG1235_4088 [Verrucomicrobiae bacterium
DG1235]
gi|198260149|gb|EDY84457.1| hypothetical protein VDG1235_4088 [Verrucomicrobiae bacterium
DG1235]
Length=156
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (68%), Gaps = 0/55 (0%)
Query 168 VEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLL 222
VEGVGLW + W E+ V++ I++PLE++++A+ + + +INVA V YL+
Sbjct 88 VEGVGLWKSRHWAEWLGVISGGIYIPLELYEIARHPSWITLAILTINVAIVAYLI 142
>gi|39997774|ref|NP_953725.1| hypothetical protein GSU2680 [Geobacter sulfurreducens PCA]
gi|39984666|gb|AAR36052.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
Length=153
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/82 (37%), Positives = 45/82 (55%), Gaps = 0/82 (0%)
Query 141 LEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLA 200
LE A AA L L+ YA L+ E GLW + W E+ +V+ I+LPLEV++L
Sbjct 64 LEAANAASDGRLRLLALGAFGYAGLRFTEAWGLWRARPWAEWLGIVSGGIYLPLEVYELV 123
Query 201 KGITTTRVVTFSINVAAVVYLL 222
I+ ++ TF +N+ V L+
Sbjct 124 VSISAVKIGTFLVNLIVVAVLV 145
>gi|220907899|ref|YP_002483210.1| hypothetical protein Cyan7425_2492 [Cyanothece sp. PCC 7425]
gi|219864510|gb|ACL44849.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]
Length=159
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (28%), Positives = 47/85 (56%), Gaps = 0/85 (0%)
Query 141 LEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLA 200
L+ + + TL LI+ Y +L V +GLW + W E + + +P+E+++L
Sbjct 62 LQTLINSDIPTLQLISRAAGIYGLLLGVAAIGLWFDRLWAELLFITLVGVLIPVEIYELI 121
Query 201 KGITTTRVVTFSINVAAVVYLLISK 225
+ +T++V+ F IN+ ++LL+ +
Sbjct 122 QAASTSKVLVFMINLLIFIFLLVRQ 146
Lambda K H
0.325 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 377837056800
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40