BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0102 Length=661 Score E Sequences producing significant alignments: (Bits) Value gi|15607244|ref|NP_214616.1| integral membrane protein [Mycobact... 1301 0.0 gi|340625138|ref|YP_004743590.1| putative integral membrane prot... 1300 0.0 gi|298527493|ref|ZP_07014902.1| conserved hypothetical protein [... 1299 0.0 gi|294992947|ref|ZP_06798638.1| hypothetical protein Mtub2_00170... 1298 0.0 gi|339293169|gb|AEJ45280.1| integral membrane protein [Mycobacte... 1258 0.0 gi|308373890|ref|ZP_07434006.2| conserved membrane protein [Myco... 1217 0.0 gi|240168056|ref|ZP_04746715.1| integral membrane protein [Mycob... 957 0.0 gi|183980299|ref|YP_001848590.1| integral membrane protein [Myco... 952 0.0 gi|118619887|ref|YP_908219.1| integral membrane protein [Mycobac... 942 0.0 gi|15828086|ref|NP_302349.1| hypothetical protein ML1998 [Mycoba... 907 0.0 gi|340795384|ref|YP_004760847.1| hypothetical protein CVAR_2429 ... 445 1e-122 gi|262202533|ref|YP_003273741.1| cytochrome C oxidase caa3-type,... 430 4e-118 gi|40445328|ref|NP_954788.1| integral membrane protein [Gordonia... 406 5e-111 gi|257055224|ref|YP_003133056.1| hypothetical protein Svir_11750... 395 1e-107 gi|296392574|ref|YP_003657458.1| cytochrome C oxidase assembly f... 392 1e-106 gi|317507398|ref|ZP_07965132.1| cytochrome c oxidase [Segnilipar... 390 3e-106 gi|300788665|ref|YP_003768956.1| copper resistance protein D [Am... 388 2e-105 gi|302526443|ref|ZP_07278785.1| hypothetical protein SSMG_02825 ... 380 5e-103 gi|302529062|ref|ZP_07281404.1| copper resistance transporter [S... 379 9e-103 gi|134097908|ref|YP_001103569.1| copper resistance transporter [... 371 2e-100 gi|291010102|ref|ZP_06568075.1| copper resistance transporter [S... 363 6e-98 gi|134103051|ref|YP_001108712.1| copper resistance transporter [... 363 6e-98 gi|256375263|ref|YP_003098923.1| copper resistance D domain-cont... 357 5e-96 gi|325675997|ref|ZP_08155680.1| ABC superfamily ATP binding cass... 352 9e-95 gi|312140393|ref|YP_004007729.1| integral membrane protein [Rhod... 351 2e-94 gi|262201961|ref|YP_003273169.1| cytochrome C oxidase caa3-type,... 350 4e-94 gi|324998091|ref|ZP_08119203.1| copper resistance transporter [P... 350 5e-94 gi|126436199|ref|YP_001071890.1| copper resistance D domain-cont... 348 2e-93 gi|108800583|ref|YP_640780.1| copper resistance D [Mycobacterium... 348 2e-93 gi|226307325|ref|YP_002767285.1| hypothetical protein RER_38380 ... 341 2e-91 gi|229494015|ref|ZP_04387784.1| ABC-type transporter, permease c... 340 3e-91 gi|111018405|ref|YP_701377.1| copper resistance transporter [Rho... 340 5e-91 gi|331698569|ref|YP_004334808.1| cytochrome c oxidase caa3-type,... 340 6e-91 gi|226360525|ref|YP_002778303.1| hypothetical protein ROP_11110 ... 339 1e-90 gi|296137824|ref|YP_003645067.1| cytochrome C oxidase caa3-type,... 336 7e-90 gi|319947998|ref|ZP_08022175.1| integral membrane protein [Dietz... 332 1e-88 gi|54023269|ref|YP_117511.1| hypothetical protein nfa13020 [Noca... 332 2e-88 gi|333990066|ref|YP_004522680.1| ABC transporter permease [Mycob... 332 2e-88 gi|342857875|ref|ZP_08714531.1| ABC transporter permease [Mycoba... 331 2e-88 gi|118472771|ref|YP_888963.1| ABC transporter permease [Mycobact... 325 2e-86 gi|258652032|ref|YP_003201188.1| copper resistance D domain-cont... 320 6e-85 gi|333918729|ref|YP_004492310.1| copper resistance transporter [... 318 2e-84 gi|315443610|ref|YP_004076489.1| hypothetical protein Mspyr1_199... 317 6e-84 gi|256376889|ref|YP_003100549.1| copper resistance D domain-cont... 315 1e-83 gi|254774512|ref|ZP_05216028.1| hypothetical protein MaviaA2_075... 314 3e-83 gi|68535604|ref|YP_250309.1| hypothetical protein jk0532 [Coryne... 314 3e-83 gi|41408395|ref|NP_961231.1| hypothetical protein MAP2297c [Myco... 313 5e-83 gi|336458266|gb|EGO37246.1| glycerol-3-phosphate O-acyltransfera... 312 1e-82 gi|169628647|ref|YP_001702296.1| copper resistance D [Mycobacter... 308 2e-81 gi|118465739|ref|YP_880921.1| ABC transporter permease [Mycobact... 307 3e-81 >gi|15607244|ref|NP_214616.1| integral membrane protein [Mycobacterium tuberculosis H37Rv] gi|15839482|ref|NP_334519.1| hypothetical protein MT0111 [Mycobacterium tuberculosis CDC1551] gi|31791280|ref|NP_853773.1| integral membrane protein [Mycobacterium bovis AF2122/97] 70 more sequence titles Length=661 Score = 1301 bits (3367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 661/661 (100%), Positives = 661/661 (100%), Gaps = 0/661 (0%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA Sbjct 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL Sbjct 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL Sbjct 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS Sbjct 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 Query 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR Sbjct 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 Query 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR Sbjct 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 Query 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR Sbjct 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 Query 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR Sbjct 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 Query 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID Sbjct 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 Query 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG Sbjct 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 Query 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR Sbjct 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 Query 661 R 661 R Sbjct 661 R 661 >gi|340625138|ref|YP_004743590.1| putative integral membrane protein [Mycobacterium canettii CIPT 140010059] gi|340003328|emb|CCC42446.1| putative conserved integral membrane protein [Mycobacterium canettii CIPT 140010059] Length=661 Score = 1300 bits (3363), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/661 (99%), Positives = 660/661 (99%), Gaps = 0/661 (0%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA Sbjct 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL Sbjct 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL Sbjct 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS Sbjct 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 Query 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR Sbjct 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 Query 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR Sbjct 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 Query 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR Sbjct 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 Query 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLP TGDGRPPGAREWLTWLLHSR Sbjct 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPATGDGRPPGAREWLTWLLHSR 480 Query 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID Sbjct 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 Query 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG Sbjct 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 Query 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR Sbjct 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 Query 661 R 661 R Sbjct 661 R 661 >gi|298527493|ref|ZP_07014902.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497287|gb|EFI32581.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=661 Score = 1299 bits (3361), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/661 (99%), Positives = 660/661 (99%), Gaps = 0/661 (0%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 MGTH ATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA Sbjct 1 MGTHRATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL Sbjct 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL Sbjct 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS Sbjct 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 Query 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR Sbjct 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 Query 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR Sbjct 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 Query 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR Sbjct 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 Query 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR Sbjct 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 Query 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID Sbjct 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 Query 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG Sbjct 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 Query 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR Sbjct 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 Query 661 R 661 R Sbjct 661 R 661 >gi|294992947|ref|ZP_06798638.1| hypothetical protein Mtub2_00170 [Mycobacterium tuberculosis 210] Length=661 Score = 1298 bits (3359), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/661 (99%), Positives = 660/661 (99%), Gaps = 0/661 (0%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAA GLVSGARRYAEAGNPYPGA Sbjct 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAASGLVSGARRYAEAGNPYPGA 60 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL Sbjct 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL Sbjct 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS Sbjct 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 Query 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR Sbjct 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 Query 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR Sbjct 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 Query 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR Sbjct 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 Query 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR Sbjct 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 Query 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID Sbjct 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 Query 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG Sbjct 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 Query 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR Sbjct 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 Query 661 R 661 R Sbjct 661 R 661 >gi|339293169|gb|AEJ45280.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079] gi|339296817|gb|AEJ48927.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180] Length=640 Score = 1258 bits (3255), Expect = 0.0, Method: Compositional matrix adjust. Identities = 640/640 (100%), Positives = 640/640 (100%), Gaps = 0/640 (0%) Query 22 MAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCL 81 MAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCL Sbjct 1 MAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCL 60 Query 82 GALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLL 141 GALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLL Sbjct 61 GALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLL 120 Query 142 ASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGN 201 ASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGN Sbjct 121 ASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGN 180 Query 202 PGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAML 261 PGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAML Sbjct 181 PGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAML 240 Query 262 LYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAA 321 LYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAA Sbjct 241 LYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAA 300 Query 322 MASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIG 381 MASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIG Sbjct 301 MASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIG 360 Query 382 YAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFI 441 YAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFI Sbjct 361 YAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFI 420 Query 442 PVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYI 501 PVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYI Sbjct 421 PVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYI 480 Query 502 VYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPF 561 VYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPF Sbjct 481 VYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPF 540 Query 562 HAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQ 621 HAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQ Sbjct 541 HAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQ 600 Query 622 WARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMRR 661 WARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMRR Sbjct 601 WARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMRR 640 >gi|308373890|ref|ZP_07434006.2| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308343814|gb|EFP32665.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] Length=653 Score = 1217 bits (3149), Expect = 0.0, Method: Compositional matrix adjust. Identities = 620/620 (100%), Positives = 620/620 (100%), Gaps = 0/620 (0%) Query 42 GLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDA 101 GLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDA Sbjct 34 GLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDA 93 Query 102 AAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIV 161 AAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIV Sbjct 94 AAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIV 153 Query 162 AAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA 221 AAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA Sbjct 154 AAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA 213 Query 222 FATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLL 281 FATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLL Sbjct 214 FATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLL 273 Query 282 AGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAF 341 AGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAF Sbjct 274 AGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAF 333 Query 342 TAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRL 401 TAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRL Sbjct 334 TAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRL 393 Query 402 IAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVT 461 IAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVT Sbjct 394 IAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVT 453 Query 462 GDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFM 521 GDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFM Sbjct 454 GDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFM 513 Query 522 AIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFY 581 AIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFY Sbjct 514 AIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFY 573 Query 582 RSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDY 641 RSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDY Sbjct 574 RSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDY 633 Query 642 ADDELEAYNAMLRELSRMRR 661 ADDELEAYNAMLRELSRMRR Sbjct 634 ADDELEAYNAMLRELSRMRR 653 >gi|240168056|ref|ZP_04746715.1| integral membrane protein [Mycobacterium kansasii ATCC 12478] Length=658 Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/661 (75%), Positives = 557/661 (85%), Gaps = 3/661 (0%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 M T + SAVP RS S A+ L +GLLG+ V+A +GL SGARRYA AGNPYPG Sbjct 1 MQTDVTADRSPSAVPASRSISWALAGLLLGLLGISGVLAGYGLASGARRYATAGNPYPGG 60 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 F+ +AEP+G+F ASLA A+CLGAL++VV+ ++PE DGLIDAAAFR+HL+AERVS WLGL Sbjct 61 FLCIAEPLGYFLASLATAVCLGALVYVVIASRPEHDGLIDAAAFRVHLVAERVSVAWLGL 120 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 A MVVIQAAHD GV P++LL GAL D+V ASE+ARGWIVAAI ALVVA LRL TRW+ Sbjct 121 AVVMVVIQAAHDAGVAPSQLLGGGALLDAVGASEVARGWIVAAIGALVVAVTLRLITRWV 180 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 GH VLL+PTV+AVVATAVTGN GQGPDHDY TSAAIVF +A ATLTGLK A A+A TP Sbjct 181 GHFVLLIPTVIAVVATAVTGNAGQGPDHDYTTSAAIVFTLALATLTGLKTATAVATATPG 240 Query 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 RAV V QV CGAL L+YGA+LLYL IPGW+ DSDFARLGL AG+++ VWL DCW L VR Sbjct 241 RAVQVMQVACGALTLSYGAVLLYLLIPGWSFDSDFARLGLAAGLVVALVWLSDCWGLFVR 300 Query 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 P +G R G AL MMA MA++AAMA+ TAPR++TH F+AWDVFLGYELPQPP + Sbjct 301 PAGSGGARIAG---ALTMMAVMAAVAAMAIQTAPRYVTHQFSAWDVFLGYELPQPPNVVT 357 Query 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 ++T WRFDSL+G GVVLA+GY + LR+ GN+WPVGRL+AWLTGC LVFTS SG+R Sbjct 358 LVTEWRFDSLVGTLGVVLAVGYVVAYVRLRKNGNAWPVGRLMAWLTGCVVLVFTSSSGLR 417 Query 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 AYGSAMFSVHMAEHMTLNMF+PVLLVLGGPVTLALRVLP GDG+PPG REWLTWLLHSR Sbjct 418 AYGSAMFSVHMAEHMTLNMFVPVLLVLGGPVTLALRVLPAAGDGQPPGPREWLTWLLHSR 477 Query 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 VT FLSHPITAF+LFVASPYIVYFTPLFD VRYHWGHEFMA+HFL+VGYLFYWAIIGID Sbjct 478 VTAFLSHPITAFILFVASPYIVYFTPLFDILVRYHWGHEFMAVHFLIVGYLFYWAIIGID 537 Query 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMT SS +G+ FY+SV LPWL SI+ADQHLGG Sbjct 538 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTTSSAIGSGFYQSVGLPWLPSIVADQHLGG 597 Query 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 GIAW TELP+I+VIVALV QWARQDRRVA+REDRHADS+YADD+L+AYNAMLRELSRMR Sbjct 598 GIAWGATELPIIIVIVALVAQWARQDRRVAAREDRHADSNYADDDLDAYNAMLRELSRMR 657 Query 661 R 661 R Sbjct 658 R 658 >gi|183980299|ref|YP_001848590.1| integral membrane protein [Mycobacterium marinum M] gi|183173625|gb|ACC38735.1| conserved integral membrane protein [Mycobacterium marinum M] Length=658 Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/661 (75%), Positives = 562/661 (86%), Gaps = 3/661 (0%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 M T G A+SA P RS S+ V L +GLL + AV+A++G+VSG RRYA GNPYPG Sbjct 1 MDTDGPGVVASSAAPPSRSGSLTSVWLLLGLLAISAVLASYGVVSGVRRYATVGNPYPGW 60 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 F+S AEP G+F ASL+GA+CLG LI+VVM ++PE DGLIDA AFRIHL+ ERVS WL L Sbjct 61 FLSAAEPTGYFLASLSGAVCLGGLIYVVMMSRPEHDGLIDAGAFRIHLVTERVSVAWLVL 120 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 AA+MVV+Q AHD+GV P RLLASGA+ D++A SE+AR WIV ICALVVA ALRL TRW+ Sbjct 121 AASMVVVQGAHDSGVSPIRLLASGAVRDAIATSEIARAWIVVTICALVVAVALRLNTRWV 180 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 HVVLL+PTV+AV+ATAVTGN GQGPDHD+ATSAAIVFA+A ATLTGLK A AL G TP+ Sbjct 181 AHVVLLIPTVIAVIATAVTGNAGQGPDHDFATSAAIVFALAAATLTGLKAATALTGATPT 240 Query 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVR 300 R V + QV CGALA++YGA+LLYLF+PGW S+FAR+GLLAG++L VW+FDCW+L VR Sbjct 241 RTVQLMQVACGALAVSYGAVLLYLFVPGWDFGSEFARIGLLAGLVLVLVWVFDCWQLFVR 300 Query 301 PPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIAR 360 PP + R G + AALAMMA +A+I AMAV TAPRF+ H FTAWDVFLGYELPQPP + R Sbjct 301 PPRSTR---GATAAALAMMAVLAAIGAMAVQTAPRFVAHQFTAWDVFLGYELPQPPDVGR 357 Query 361 VLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVR 420 ++T+WRFDSL+G AGVVLA GY AGF LRRRG++WPV RL++WL GCA LV TS SGVR Sbjct 358 LITLWRFDSLVGVAGVVLAAGYVAGFVRLRRRGHAWPVSRLVSWLIGCAVLVITSSSGVR 417 Query 421 AYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSR 480 YGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALR LP G+G+PPG REWLTWLLHSR Sbjct 418 TYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALPAAGEGQPPGPREWLTWLLHSR 477 Query 481 VTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGID 540 VT F SHPI AF+LFVASPYIVYFTPLFDT VRYHWGHEFMA+HFL+VGYLFYWAIIGID Sbjct 478 VTAFFSHPIIAFILFVASPYIVYFTPLFDTLVRYHWGHEFMAVHFLIVGYLFYWAIIGID 537 Query 541 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGG 600 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTM+S +G TFYRSVNLPWL+SI +DQHLGG Sbjct 538 PGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMNSAIGDTFYRSVNLPWLASIESDQHLGG 597 Query 601 GIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 GIAW TELP+I+VIVALV QWARQDR+VA+R+DRHADS YADD+LEAYNAMLREL+RMR Sbjct 598 GIAWGATELPIIIVIVALVAQWARQDRQVAARQDRHADSSYADDDLEAYNAMLRELARMR 657 Query 661 R 661 Sbjct 658 E 658 >gi|118619887|ref|YP_908219.1| integral membrane protein [Mycobacterium ulcerans Agy99] gi|118571997|gb|ABL06748.1| conserved integral membrane protein [Mycobacterium ulcerans Agy99] Length=667 Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust. Identities = 489/670 (73%), Positives = 560/670 (84%), Gaps = 12/670 (1%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 M T G A+SA P RS S+ V L +GLL + AV+A++G+VSG RRYA GNPYP A Sbjct 1 MDTDGPGVVASSAAPPSRSGSLTSVWLLLGLLAISAVLASYGVVSGVRRYATVGNPYPDA 60 Query 61 ---------FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAE 111 F+S AEP G+F ASL+GA+CLG LI+VVM ++PE DGLIDA AFRIHL+ E Sbjct 61 TVGNPYPGWFLSAAEPTGYFLASLSGAVCLGGLIYVVMMSRPEHDGLIDAGAFRIHLVTE 120 Query 112 RVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVAT 171 RVS WL LAA+MVV+Q AHD+GV P RLLASGA+ D++A SE+A WIV ICALVVA Sbjct 121 RVSVAWLVLAASMVVVQGAHDSGVSPIRLLASGAVRDAIATSEIAHAWIVVTICALVVAV 180 Query 172 ALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIA 231 ALRL TRW+ HVVLL+PTV+AV+ATAVTGN GQGPDHD+ATSAAIVFA+A ATLTGLK A Sbjct 181 ALRLNTRWVAHVVLLIPTVIAVIATAVTGNAGQGPDHDFATSAAIVFALAAATLTGLKAA 240 Query 232 AALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWL 291 AL G TP+RAV + QV CGALA++YG +LLYLF+PGW S+FAR+GLLAG++L VW+ Sbjct 241 TALTGATPTRAVQLMQVACGALAVSYGTVLLYLFVPGWDFGSEFARIGLLAGLLLVLVWV 300 Query 292 FDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYE 351 FDCW+L VRPP + R G + AALAMMA +A+I AMAV TAPRF+ H FTAWDVFLGYE Sbjct 301 FDCWQLFVRPPRSTR---GATAAALAMMAVLAAIGAMAVQTAPRFVAHQFTAWDVFLGYE 357 Query 352 LPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAAL 411 LPQPP + R++T+WRFDSL+G AGVVLA GY AGF LRRRG++WPV RL++WL GCA L Sbjct 358 LPQPPDVGRLITLWRFDSLVGVAGVVLAAGYVAGFVRLRRRGHAWPVSRLVSWLIGCAVL 417 Query 412 VFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGARE 471 V TS SGVR YGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALR LP +G+PPG RE Sbjct 418 VITSSSGVRTYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALPAAVEGQPPGPRE 477 Query 472 WLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYL 531 WLTWLLHSRVT F SHPI AF+LFVASPYIVYFTPLFDT VRYHWGHEFMA+HFL+VGYL Sbjct 478 WLTWLLHSRVTAFFSHPIIAFILFVASPYIVYFTPLFDTLVRYHWGHEFMAVHFLIVGYL 537 Query 532 FYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSS 591 FYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTM+S +G TFYRSVNLPWL+S Sbjct 538 FYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMNSAIGDTFYRSVNLPWLAS 597 Query 592 IIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNA 651 I +DQHLGGGIAW TELP+I+VIVALV QWARQDR+VA+R+DRHADS YADD+LEAYNA Sbjct 598 IESDQHLGGGIAWGATELPIIIVIVALVAQWARQDRQVAARKDRHADSSYADDDLEAYNA 657 Query 652 MLRELSRMRR 661 MLREL+RMR Sbjct 658 MLRELARMRE 667 >gi|15828086|ref|NP_302349.1| hypothetical protein ML1998 [Mycobacterium leprae TN] gi|221230563|ref|YP_002503979.1| hypothetical protein MLBr_01998 [Mycobacterium leprae Br4923] gi|1723025|sp|P53525.1|Y1998_MYCLE RecName: Full=Uncharacterized protein ML1998 gi|559911|emb|CAA86362.1| unknown [Mycobacterium leprae] gi|13093640|emb|CAC30953.1| possible membrane protein [Mycobacterium leprae] gi|219933670|emb|CAR72095.1| possible membrane protein [Mycobacterium leprae Br4923] Length=659 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/662 (71%), Positives = 519/662 (79%), Gaps = 4/662 (0%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 M T T +ATSA+ P S+ + GLLG VAA+GL S RY GNP PG+ Sbjct 1 MQTDEPTGTATSAIRIPPLISLRTTLMVAGLLGNVVAVAAYGLFSRTERYGAVGNPDPGS 60 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 F+ VAEPVG+F ASL+ ALCLGALI+ VM P+ DGLIDA AFRIHL ERVS WL Sbjct 61 FIGVAEPVGYFGASLSSALCLGALIYFVMMVWPQADGLIDAQAFRIHLAEERVSIGWLAF 120 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 A TMVV+QAA+D+GV PA L AL +++ SE +R WIV ICAL+V LR+ R+ Sbjct 121 ALTMVVVQAANDSGVTPAELRTGAALFNAITTSETSRAWIVVTICALLVTLTLRVIIRYS 180 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS 240 H VLL+P V+ V+ATAVTGN GQGPDHDYATSA IVFA+A A L+GLKI AAL TPS Sbjct 181 DHFVLLIPAVIGVIATAVTGNAGQGPDHDYATSAVIVFALAIAALSGLKITAALTEVTPS 240 Query 241 RAVLVTQVTCGALALAYGAMLLYLFIPGWA-VDSDFARLGLLAGVILTSVWLFDCWRLLV 299 RAVL+ QV CG LALAYGA L+YL PG A +DSDF RLGL+AGV++T V DCW L++ Sbjct 241 RAVLIVQVVCGVLALAYGAELVYLLSPGAAMIDSDFGRLGLVAGVLVTLVCFSDCWALVM 300 Query 300 RPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIA 359 PH+ R ALAMMA A+ AAM+V TAPRFLTH FTAWDVFLGYELPQPP I Sbjct 301 GRPHSDHRT---RLTALAMMAVTAATAAMSVQTAPRFLTHRFTAWDVFLGYELPQPPNIV 357 Query 360 RVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGV 419 R TVWRFDSLIGA +VL IGY AGF +RR GN+WPVGRL+AWLTGC ALVFTS SGV Sbjct 358 RFFTVWRFDSLIGATAIVLGIGYVAGFVRVRRAGNTWPVGRLVAWLTGCVALVFTSSSGV 417 Query 420 RAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHS 479 R YGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALR L GDG+ PG REWLTWL+HS Sbjct 418 RTYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALSAAGDGQQPGPREWLTWLMHS 477 Query 480 RVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGI 539 VT FLSHP+T F+LFV SPYIVYFTPLFDT VRYHWGHEFMAIHFL+VGY+FYWAIIGI Sbjct 478 SVTAFLSHPVTNFILFVGSPYIVYFTPLFDTLVRYHWGHEFMAIHFLLVGYIFYWAIIGI 537 Query 540 DPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLG 599 DPGPRRLPY RIGLLFAVMPFHAFFGIALMTM+S + A FYRSVNLPWL+SI ADQH+G Sbjct 538 DPGPRRLPYLARIGLLFAVMPFHAFFGIALMTMTSAISAEFYRSVNLPWLASIDADQHIG 597 Query 600 GGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRM 659 G IAWS TELPVI+VIVAL+ QWARQD RVA REDRHADS YADD+L AYNAMLRELSRM Sbjct 598 GAIAWSATELPVIIVIVALMAQWARQDHRVAVREDRHADSTYADDDLNAYNAMLRELSRM 657 Query 660 RR 661 RR Sbjct 658 RR 659 >gi|340795384|ref|YP_004760847.1| hypothetical protein CVAR_2429 [Corynebacterium variabile DSM 44702] gi|340535294|gb|AEK37774.1| putative membrane protein [Corynebacterium variabile DSM 44702] Length=654 Score = 445 bits (1144), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 263/646 (41%), Positives = 369/646 (58%), Gaps = 32/646 (4%) Query 37 VVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPD 96 ++A ++SG Y EA PYPG+ +VA V AGAL LG ++ V +++ P+ Sbjct 19 LLAVAAMLSGDLPYREAAEPYPGSGTAVAYVVLSGVTWAAGALVLGGIVIVAVSSCPDRW 78 Query 97 GLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMA 156 GL+ A+ + + + LW + V + A +GV +L+ SG + + + A E A Sbjct 79 GLLSASTYLVQRTVVASAALWFVGSVVTVPVSVAASSGVPVVKLIRSGIVFEVLPAVEEA 138 Query 157 RGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAI 216 WIV+A+CA VV + RW V+ +P + ++A VTGN QGPDHD AT+ A Sbjct 139 YAWIVSAVCAAVVFLVTSPWPRWNPTVLAAIPACIGLMAVPVTGNVAQGPDHDIATTLAF 198 Query 217 VFAVAFATLTGLKIAAALAG------------TTPSRAVLVTQVTCGALALAYGAML-LY 263 V A L G++ L G T R V++ + + LA G +L L+ Sbjct 199 GVYVPLAVLIGVRSLVGLRGMVRRTDADVTADTRARRRVVMVSLLAETVCLAAGLVLVLW 258 Query 264 LFIPG-WAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGRRRGGG------SGAAL 316 L PG +S + R L G++L + + D L R GG S + Sbjct 259 LLAPGALLTESVYGRCCLAGGIVLVILMIADVREL---------RCGGAEITRLWSVLSC 309 Query 317 AMMAAMASIAAMA-VMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAG 375 +AA+ +AAM + TAP H F+ WDV+LGYELP PP++ R++ V RFD +G A Sbjct 310 VGVAALVLVAAMVRLYTAPVLPRHEFSIWDVYLGYELPDPPSVLRMIGVVRFDFFLGTAS 369 Query 376 VVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHM 435 +VLA Y G+ LRRRG WP+ +L+ WL GC L+ + SG+ Y SAM SVHM HM Sbjct 370 LVLAALYLWGYLHLRRRGVHWPLNKLLWWLGGCVGLLMGTSSGLATYSSAMMSVHMGNHM 429 Query 436 TLNMFIPVLLVLGGPVTLALRVLPVTGDGRP-PGAREWLTWLLHSRVTTFLSHPITAFVL 494 LNM+ V+LVLG PVTLALR LP + G REW+T L+ + + ++HP F++ Sbjct 430 LLNMYASVMLVLGSPVTLALRALPAMSRRQGLTGPREWVTSLMKAGFSRVVTHPAFTFIV 489 Query 495 FVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGL 554 FVAS Y+VYFTPL+ F +YHW H F+ IHF V GYLF+W IIG DPGPR LP+ R+G+ Sbjct 490 FVASLYVVYFTPLWGMFAKYHWWHLFITIHFTVSGYLFFWTIIGDDPGPRELPHIARLGI 549 Query 555 LFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMV 614 L MPFHAFFGIA+M++ ST+ A FY + WL+ + DQ +GG IAW ++E+P+++V Sbjct 550 LLGAMPFHAFFGIAMMSLDSTIAADFYDRLRFDWLADRLHDQWVGGAIAWGMSEIPILIV 609 Query 615 IVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 +AL QW R D+R A R DR D+ DD L+AYN ML E+ R Sbjct 610 AIALGVQWFRSDQRAAKRLDRWEDAGKTDD-LDAYNRMLHEMKSSR 654 >gi|262202533|ref|YP_003273741.1| cytochrome C oxidase caa3-type, assembly factor CtaG-like protein [Gordonia bronchialis DSM 43247] gi|262085880|gb|ACY21848.1| Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein [Gordonia bronchialis DSM 43247] Length=654 Score = 430 bits (1105), Expect = 4e-118, Method: Compositional matrix adjust. Identities = 266/653 (41%), Positives = 368/653 (57%), Gaps = 35/653 (5%) Query 31 LLGVCAVVAAFGLVS-----GARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALI 85 +LG A GLV+ GA RY E+G+P+PG +V + VG + ++ AL +G L+ Sbjct 11 VLGATAAAVGLGLVAYALRVGASRYLESGDPFPGRTSAVLDVVGNYVGAVLAALVVGGLV 70 Query 86 HVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGA 145 + + + DG ID + +R H L R+S LW+ + MV++ AA G+ R++ +G Sbjct 71 IIAIATVIDSDGYIDVSVYRTHRLVRRLSALWMVWSTGMVLVAAADTAGLSVVRMVVTGQ 130 Query 146 LSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQG 205 + +V+ S A W+V A+ A VV+ + RWL HV +L+P + V A GN QG Sbjct 131 VGYAVSVSLPAIAWMVCAVAAGVVSVVTAMSLRWLTHVSMLLPAAIGVAALPAVGNAAQG 190 Query 206 PDHDYATSAAIVFAVAFATLTGLKI-----AAALAGTTPSRAVL--VTQVTC------GA 252 PDHDY T + FAVAFA G++ A L + + A + +V C Sbjct 191 PDHDYTTGVVVCFAVAFAVSLGVRCMQHSRAGGLCANSMNYAAAQRIKKVLCTADAVALV 250 Query 253 LALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVW---LFDCWRLLVRPPHAGRRRG 309 +A +L +PG A G+ GV++ S+ + D L VR R Sbjct 251 CVVAVAGLLRTRDVPGSA-------FGVATGVLIVSLVGLVIADVITLRVR-----RDTV 298 Query 310 GGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDS 369 + AA A++ A A M AP + H FT WDV+LGY LP PP I +L VWRFD Sbjct 299 VPAVAAGALVVAAGCWAVMDTRVAPGLIAHPFTVWDVYLGYPLPDPPAIWSMLGVWRFDI 358 Query 370 LIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSV 429 ++G A V + + Y LRRRG+ WP+GR ++W GC LV S SGVRAYG+AMFSV Sbjct 359 VVGGAAVAMGLAYGIAVRRLRRRGSGWPLGRAVSWFAGCVVLVLASSSGVRAYGNAMFSV 418 Query 430 HMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRP-PGAREWLTWLLHSRVTTFLSHP 488 HM EHM L+M P LL LG P +LALR P G+ P AR + +L S L+HP Sbjct 419 HMVEHMGLSMIAPALLALGAPASLALRAFPRHAAGQQLPSARSTVLMILDSPTVRVLTHP 478 Query 489 ITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPY 548 + A LFV P+ VYFTP+F RYHWGH M+ F+VVGYLF+W + G+D GPRRLP Sbjct 479 VVALSLFVGVPFAVYFTPVFGILARYHWGHIVMSGLFVVVGYLFFWTVTGVDRGPRRLPI 538 Query 549 PGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTE 608 GR+GLLFA MPFHAFFGIALMTMS+ V +FY+ + LPW DQ +GG +AW ++E Sbjct 539 LGRLGLLFAAMPFHAFFGIALMTMSTVVAESFYQQLQLPWQPDPAQDQWVGGVLAWVVSE 598 Query 609 LPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMRR 661 +P+++++V LV +WARQ+ R R D +A D + + + EL+ RR Sbjct 599 VPIVVIMVVLVVRWARQE-RAGRRHDDYAVGAGGADSMGDIDTEIHELAAGRR 650 >gi|40445328|ref|NP_954788.1| integral membrane protein [Gordonia westfalica] gi|40217358|emb|CAE09109.1| putative integral membrane protein [Gordonia westfalica] Length=662 Score = 406 bits (1044), Expect = 5e-111, Method: Compositional matrix adjust. Identities = 264/637 (42%), Positives = 360/637 (57%), Gaps = 33/637 (5%) Query 39 AAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGL 98 A + VSGA RY E+ +PYPG +VA+ VG F A+ LG L+ VV+TA P+ G Sbjct 16 AVYAWVSGAGRYVESADPYPGVGTAVADVVGNFVGFALAAVVLGELVSVVLTAVPDSQGF 75 Query 99 IDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARG 158 IDAA + + R +G + +A M AA TGV +++SG + + + S A Sbjct 76 IDAAVYPVFRRVRRAAGCSVVVALFMAFTAAADTTGVSVGAMVSSGKVGYAFSVSLPALA 135 Query 159 WIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVF 218 W+V A +VV + RW V L+VP + V+A V GN QGPDHDY T A IVF Sbjct 136 WLVVATAGVVVLIG-SVSLRWSAQVALVVPAAVCVLALPVVGNAAQGPDHDYTTGAVIVF 194 Query 219 AVAFATLTGLK---------IAAALAGTTPSRAV--LVTQVTCGALALAYGAMLLYLFIP 267 AV+ A GL+ + +A R V +V ALA A LL Sbjct 195 AVSLALSVGLRWADRYRVRGLGSATIDEAADRRVGGVVLGADVTALAGAVAVTLLLRTPD 254 Query 268 GWAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGRRRG---GGSGAALAMMAAMAS 324 W+ S F R L +LT + + D RL RRG + + LA A+ + Sbjct 255 VWS--SAFGRAAGLLVAVLTVLVIADLVRL---------RRGVVTPVTASVLAAGTALVA 303 Query 325 IAAMAVM---TAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIG 381 +A AVM AP + H FTAWDV+LGY LP PP + ++++WR D ++G A VV A+G Sbjct 304 VACWAVMDTRVAPGLIAHPFTAWDVYLGYSLPGPPDVVSLVSLWRVDLVVGVAAVVGAVG 363 Query 382 YAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFI 441 Y R G+ WP+ R ++W+ GCA +V ++ SG++AYG+A+FSVHMAEH L M Sbjct 364 YVVAARRERASGHRWPIRRTVSWVVGCAVVVVSTSSGLKAYGNALFSVHMAEHTALTMIA 423 Query 442 PVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYI 501 PVLLV G P+TL LRVLP TG R L +L SR + +P+ AF LFV S Y+ Sbjct 424 PVLLVGGAPITLLLRVLPTTGTTGGAACRRALLIVLSSRGLQLVLNPVAAFALFVGSSYL 483 Query 502 VYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPF 561 VYFTP+FD VRYHWGH M++ FL GYLF+W +GIDPGPRRLP+ R+GLLFAVMPF Sbjct 484 VYFTPVFDVLVRYHWGHVVMSVVFLATGYLFFWVTVGIDPGPRRLPFLARLGLLFAVMPF 543 Query 562 HAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQ 621 HAFFGIA+MT ++ +G +FY + LPW + Q +GG +A ++E+P+++V V L Q Sbjct 544 HAFFGIAVMTSTTVIGESFYSQLQLPWNPDLARTQWVGGVVAAVISEIPMVLVCVVLSAQ 603 Query 622 WARQDRRVASREDRHADSDYADDELEAYNAMLRELSR 658 W R +R R DR + AM+ +L++ Sbjct 604 WVRAER----RPDRSESAAIDAGTSHTVAAMVSQLAQ 636 >gi|257055224|ref|YP_003133056.1| hypothetical protein Svir_11750 [Saccharomonospora viridis DSM 43017] gi|256585096|gb|ACU96229.1| predicted membrane protein [Saccharomonospora viridis DSM 43017] Length=651 Score = 395 bits (1016), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 247/654 (38%), Positives = 344/654 (53%), Gaps = 41/654 (6%) Query 34 VCAVVAAFGLV--SGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTA 91 + A V A GLV +G Y AG PG V A LA A+C+G+L+ Sbjct 6 LLATVVAVGLVALTGGLSYGVAGLTDPGDLTRYGIMVVRVGADLAAAVCIGSLLLAAFLV 65 Query 92 KPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVA 151 P+ G +D + A + +W A V AA G + L + V Sbjct 66 PPQKSGTLDVDGYAALRTAGTAAWVWFVFALASVFFVAADGAGKPVTDVFDPVVLLNYVG 125 Query 152 ASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYA 211 A E + W++ A AL++A RL W VL +VL ++ A TG+ G HD A Sbjct 126 AIEQPKAWLLTAGIALLLALGCRLVLSWGWTTVLFFVSVLGLLPIAATGHSASGGSHDMA 185 Query 212 TSAAIVFAVAFATLTGLKIAA-----------ALAGTTPSRAVLVTQVTCGALALAYGAM 260 T++ + + A G IA LA S LV + G + Sbjct 186 TNSLLYHLIGAALWVGGLIALLAHARRRGDHLPLATARFSTVALVCWLVLGVSGVVNA-- 243 Query 261 LLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGRRR---------GGG 311 L P + +++ + L V + + +F H R+R GGG Sbjct 244 -LVRVAPDQLLTTNYGLVVLAKVVAIAVLGVFG---------HQHRKRSVRELAEGAGGG 293 Query 312 SGAALAMMAAMASIAAMAVMTA------PRFLTHAFTAWDVFLGYELPQPPTIARVLTVW 365 + LA + + + TA P + + ++ +GY+L P T T W Sbjct 294 TLVRLAAVEVLVMFITFGLATALSRTPPPLEIAAQPSTVELLIGYDLNGPITAVSAFTDW 353 Query 366 RFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSA 425 RFD + G +VLA Y AG LRRRG++WP GR +AWL GCA L+ + SG+ Y A Sbjct 354 RFDLVYGTLALVLAGLYVAGVWRLRRRGDAWPAGRTVAWLLGCAMLLLATSSGLGRYSPA 413 Query 426 MFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFL 485 MFS+HM HM L+M +P+LLVLGGP+TLALR LP G RPPG REWL +HS V F Sbjct 414 MFSIHMIGHMLLSMVVPILLVLGGPMTLALRALPPAGRQRPPGPREWLLAFVHSPVARFF 473 Query 486 SHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRR 545 ++P A VLFVAS Y +YF+ LFD +R+HW H M HFL+VGY ++W IIGIDP PR+ Sbjct 474 TNPFVALVLFVASFYGLYFSGLFDVALRHHWAHLAMNAHFLLVGYAYFWPIIGIDPSPRK 533 Query 546 LPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWS 605 LP G+IGLL + +PFHAFFG+ LM M + +G FYR+++LPW+ ++ DQ +GGGIAW+ Sbjct 534 LPPLGKIGLLMSSVPFHAFFGVILMNMQTAIGEDFYRALDLPWVDGLLTDQRVGGGIAWA 593 Query 606 LTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRM 659 ELPV++V++AL+ QW R D R + R D+ ++ DDELEAYNAMLR+L++ Sbjct 594 SGELPVLVVMIALLVQWTRDDERASRRRDKRVEAK-GDDELEAYNAMLRQLAKQ 646 >gi|296392574|ref|YP_003657458.1| cytochrome C oxidase assembly factor CtaG-related protein [Segniliparus rotundus DSM 44985] gi|296179721|gb|ADG96627.1| Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein [Segniliparus rotundus DSM 44985] Length=628 Score = 392 bits (1006), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 253/612 (42%), Positives = 340/612 (56%), Gaps = 28/612 (4%) Query 56 PYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSG 115 PYPG V + + F AS AGA+CLG L+ + +P + + AER S Sbjct 30 PYPGTEVLLVQVATQFVASFAGAVCLGGLVFALCCTRPNAKMRLGPRGYAGLRTAERASP 89 Query 116 LWLGLAATMVVIQAAHDTGVGPARLL----ASGALSDSVAASEMARGWIVAAICALVVAT 171 LW A +V A G P LL G L V+ SE + W+V A+ A VA Sbjct 90 LWAVSALFAMVTSATVQAGRAPWDLLHVEDPVGRLVSLVSVSERSGAWLVVAVLATAVAA 149 Query 172 ALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIA 231 R W L +V AVVA +T N G GP+HD+A+ AA+ +V A L G + Sbjct 150 LSRCCLGWASCAGLAWLSVFAVVAPWMTQNAGDGPNHDWASGAAVWTSVGLAVLVG--VG 207 Query 232 AALAGTTPSRAVLVTQVTCGALALAYG------AMLLYLFIPGWAVDSD-FARLGLLAGV 284 A + G + A+A G A+L L IP A+ S + +LGL A V Sbjct 208 AQMRGDWTQDRAAAQRRARRTSAVALGMVAAGSAVLGALLIPLSAMPSTWYGQLGLAAAV 267 Query 285 ILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAW 344 + A G + AA A + +A AM+V AP F F+ Sbjct 268 LFALA-------------AAAVFFGKLTVAAGAGVVLLAVAEAMSVQPAPAFAGQRFSVP 314 Query 345 DVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAW 404 ++ LG++ P PT+ R+L+ WRFD + G V+LA Y G A LR RG++W R +++ Sbjct 315 ELLLGFDFPGAPTLWRLLSAWRFDVVFGTLAVLLAAAYVLGAARLRGRGDAWSPWRTLSF 374 Query 405 LTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDG 464 L GCA L+ + SG+ Y S FS HM HM LNMF PV LVLG PVTL LR P G Sbjct 375 LFGCALLLLVTSSGIGRYASGQFSYHMISHMGLNMFAPVFLVLGAPVTLLLRAAPTAGQ- 433 Query 465 RPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIH 524 G REW L+H+R+ L+HP+ A LFV S Y +YFTP+F VRYHWGH M +H Sbjct 434 HMAGPREWALALVHARLVQILAHPLVAVGLFVVSLYGLYFTPVFGLLVRYHWGHLLMTLH 493 Query 525 FLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSV 584 FL +GY +YWAIIG+DPG RRLP+ R+G+LFAVMPFHAFFG+A+++ + +G FYR + Sbjct 494 FLAIGYTYYWAIIGVDPGARRLPHLARLGMLFAVMPFHAFFGVAVLSDNEIIGGDFYRWL 553 Query 585 NLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADD 644 LPW+S + +DQ + G +AW+ E+P++ V+ AL+ QWA DRR ASR DRHA +DY D Sbjct 554 ALPWVSDLASDQRVAGAVAWTSGEIPIVFVVGALLYQWAGADRRAASRADRHA-ADYEDA 612 Query 645 ELEAYNAMLREL 656 EL+AYN ML++L Sbjct 613 ELDAYNHMLQKL 624 >gi|317507398|ref|ZP_07965132.1| cytochrome c oxidase [Segniliparus rugosus ATCC BAA-974] gi|316254283|gb|EFV13619.1| cytochrome c oxidase [Segniliparus rugosus ATCC BAA-974] Length=628 Score = 390 bits (1003), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 252/618 (41%), Positives = 345/618 (56%), Gaps = 28/618 (4%) Query 50 YAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLL 109 Y +PYPG+ + + V FAASLAGALCLG L+ + +P + + Sbjct 24 YLAVKSPYPGSATLILQVVAQFAASLAGALCLGGLVFALCCTRPTAQTRLGPRGYAGLRT 83 Query 110 AERVSGLWLGLAATMVVIQAAHDTGVGPARLLAS----GALSDSVAASEMARGWIVAAIC 165 E S +W A +V A + G P+ LL + G+L ++ SE A W+V + Sbjct 84 VELASPIWALSALVAMVTTATVEVGRAPSDLLRTEDPLGSLFALLSVSERAGAWLVVLVF 143 Query 166 ALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATL 225 A VA A R W L + + VVA V N G GPDHD AT AA+ +V A L Sbjct 144 ATAVALASRFCLAWTSCAALAWASAIGVVAPWVVENAGDGPDHDVATGAAVWTSVGLAVL 203 Query 226 TGLKIAAALAGT-TPSRAVLVTQVTCGALALAY-----GAMLLYLFIPGWAVDSD-FARL 278 G +AA L GT T R + A ++L +L IP A S + L Sbjct 204 VG--VAAQLRGTWTEDREAAQRRARRIIAVAAVAVAAGASVLGFLLIPLSAATSTWYGWL 261 Query 279 GLLAGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLT 338 GL++ + R G + A ++AA AMA+ AP F Sbjct 262 GLVSAALFALA----------LLAARANRFGLAAAAGTVLLAAAE---AMAIQPAPAFAW 308 Query 339 HAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPV 398 F+ ++ LG++ P PPT+ R++T WRFD++ G V+LA Y G L +RG+ W Sbjct 309 QQFSVAELLLGFDFPGPPTVWRLMTAWRFDTVFGVLAVLLAAAYGYGAWRLGKRGDEWSR 368 Query 399 GRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVL 458 R I++L GC L+ + SGV Y S FS HM HM LNMF+PV LVLG PVTL LR + Sbjct 369 WRTISFLVGCVLLLLVTSSGVGRYASGQFSYHMISHMGLNMFVPVFLVLGAPVTLLLRAV 428 Query 459 PVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGH 518 P +G PG REW L+HSR+ L+HP+ A LFV S Y +YFTP+F V+YHWGH Sbjct 429 PPSGK-HMPGPREWTLALVHSRIVQILAHPLVAVGLFVISLYGLYFTPIFGALVQYHWGH 487 Query 519 EFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGA 578 M HFL++GY +YWAI+G+DPG RRLP+ R+G+LFAVMPFHAFFG+A+++ +G Sbjct 488 LLMTAHFLIIGYTYYWAIVGVDPGARRLPHLARLGMLFAVMPFHAFFGVAVLSSDEIIGG 547 Query 579 TFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHAD 638 FYR ++LPW++ + ADQ + G +AW+ E+P++ V+ AL+ QWA+ DRR A R DRH+ Sbjct 548 NFYRWLDLPWMTDLAADQRIAGAVAWTSGEIPIVFVVGALLYQWAKADRRAADRADRHS- 606 Query 639 SDYADDELEAYNAMLREL 656 DY D EL AYNAML++L Sbjct 607 VDYDDAELTAYNAMLQKL 624 >gi|300788665|ref|YP_003768956.1| copper resistance protein D [Amycolatopsis mediterranei U32] gi|299798179|gb|ADJ48554.1| putative copper resistance protein D [Amycolatopsis mediterranei U32] gi|340530278|gb|AEK45483.1| copper resistance protein D [Amycolatopsis mediterranei S699] Length=669 Score = 388 bits (996), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 256/680 (38%), Positives = 355/680 (53%), Gaps = 40/680 (5%) Query 8 KSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEP 67 + S VPT R S+ + + LL + L GA YA AG P PG Sbjct 2 SATKSDVPTQRRASVLPLLVVGVLLAAVVAIGLIALTGGAG-YAIAGLPDPGLVTKYGIT 60 Query 68 VGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVI 127 V + A +C+G+L+ P+ G + + +A + +W A V Sbjct 61 VMRVVSESASVICVGSLLLAAFLVPPQKSGTLGPEGYGALRVAGIAAWVWFAAALLSVAF 120 Query 128 QAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLV 187 AA G +L L D V A E + W+ A+ A+++A RL W VL Sbjct 121 TAADTAGKPFGDVLDPQTLLDLVGAIEQPKAWLWTALIAVLIALGCRLALSWGWTAVLFF 180 Query 188 PTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAALAGTTPSRAVLVTQ 247 V ++ AVTG+ G HD AT++ + VA A G +A G R + + Sbjct 181 AAVGGLIPVAVTGHSASGGSHDVATNSLLFHLVAAALWVGGLVALLALGYRRGRHLSLAA 240 Query 248 VTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPP----- 302 LAL W V + + L + L ++ D L+V Sbjct 241 QRFSKLALVC-----------WIVMALSGAVNALVRIGLNDLFTTDYGLLVVAKTVALLL 289 Query 303 -----HAGRRRG------GGSGAALAMMAAMA--------SIAAMAVMTAP--RFLTHAF 341 H R +G G GA L +A++ IA+ T P +T Sbjct 290 LGVFGHQQREKGVANLVDGKGGAQLLRLASVEILIMFVTIGIASGLARTPPPADAITQPS 349 Query 342 TAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRL 401 T ++ +GY+L PT+ R+L RFD + G +VL Y AG L RRG++WPVGR Sbjct 350 TT-ELLIGYDLDGAPTVWRLLFDTRFDLVYGTFALVLGGLYLAGVRRLLRRGDTWPVGRT 408 Query 402 IAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVT 461 +AW+ GC L+ + SGV Y AMFSVHM HM L+M PVL VLGGPVTLALR LP Sbjct 409 VAWIAGCVVLLIATSSGVGRYAPAMFSVHMGNHMLLSMVAPVLFVLGGPVTLALRALPAA 468 Query 462 GDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFM 521 G PPG REWL +HS V+ FL+HP+ A +LFV S Y +YF+ LFDT + YHW H M Sbjct 469 GRDAPPGPREWLVAFVHSPVSRFLTHPVVALLLFVGSFYALYFSGLFDTALNYHWAHLAM 528 Query 522 AIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFY 581 HFL+ GY+FYW +IG+DP PRR+PY GR+G++FA MPFHAFFG+ LM+ + +G FY Sbjct 529 NGHFLLAGYVFYWPVIGVDPAPRRIPYLGRLGMMFAAMPFHAFFGVILMSKQTVIGQAFY 588 Query 582 RSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDY 641 ++LPW++ ++ADQ LGGGIAW+ E+PV++V++AL+ QW+RQD R A R DR ++ Sbjct 589 SQLHLPWVTDLLADQRLGGGIAWAAGEVPVLLVLIALLVQWSRQDEREAKRRDRR-EAAT 647 Query 642 ADDELEAYNAMLRELSRMRR 661 D+EL AYNAML+ L+ +R Sbjct 648 GDEELNAYNAMLKNLAEGKR 667 >gi|302526443|ref|ZP_07278785.1| hypothetical protein SSMG_02825 [Streptomyces sp. AA4] gi|302435338|gb|EFL07154.1| hypothetical protein SSMG_02825 [Streptomyces sp. AA4] Length=645 Score = 380 bits (976), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 244/620 (40%), Positives = 335/620 (55%), Gaps = 24/620 (3%) Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 GNP PG S + A AG +C+G L V + P G + + A Sbjct 38 GNPAPGPLTSFGTSLLRLVADAAGVVCVGGLAFAVFLSPPGEAGRLSPDGYAATRTAAAA 97 Query 114 SGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATAL 173 +G+W AA +V AA +G + L L+ V A E + W+ A VA + Sbjct 98 AGVWALAAAVLVPFDAADASGRPVSEALHLAKLAVLVNAMEEPKAWLCVLAVATTVAIGV 157 Query 174 RLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIAAA 233 W V+ L +++ ++ A+ G+ G HD AT+A + +A A TG +A Sbjct 158 WRTLTWRTTVLWLGLSLVGLLPRAIAGHVSIGAWHDLATNALVWHVIAAALWTGALVALL 217 Query 234 L-AGTTPSRAVLVTQVT-----CGALALAYGAMLLYLFIPGWAVDSD---FARLGLLAGV 284 + G+ +R V + + C + A G + G A+ F GLL GV Sbjct 218 VHRGSGAAREVALRRYRRLATWCLVVLAASGV------VDGLALARPAGLFTGYGLLLGV 271 Query 285 ILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMM---AAMASIAAMAVMTAPRFLTHAF 341 + + ++ R R RGG + + AM A +A + P F+ Sbjct 272 KVVFTVVLAVLIVVTRR----RWRGGAAALVAEVAVLAGAMGVSAGLAHLVPPAFVDDPA 327 Query 342 TAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRL 401 T + LGY+LP PPT AR+ WR D L+G V GYA G LR+RG+ WP GR Sbjct 328 TVGETVLGYDLPDPPTFARLFLDWRPDLLLGVVAVSAVAGYAVGMRRLRKRGDDWPRGRF 387 Query 402 IAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVT 461 AW G A ++ + SG+ Y S FS+HM HMTL M PVLLVLGGPVTLALR LPV Sbjct 388 WAWTCGWATVLIATSSGLGKYSSGTFSLHMVIHMTLAMLAPVLLVLGGPVTLALRALPVA 447 Query 462 GDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFM 521 G G P G REWL LLHSR T ++HP+ A V+FV S Y +YF+ LF +RYHW H+ M Sbjct 448 GKG-PDGPREWLVALLHSRFTRLVAHPLVASVVFVGSYYALYFSGLFGEAMRYHWAHQLM 506 Query 522 AIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFY 581 +HFLV GY+F+W +IG+D PR +P+ R+G++FAVMPFHAFFG+ LM + + TFY Sbjct 507 NLHFLVSGYVFFWLVIGVDRPPRSMPHLARLGMMFAVMPFHAFFGVILMNRQTVIAETFY 566 Query 582 RSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDY 641 R ++LPW+S +++DQ LGGGIAW+ E+P+I+V+VAL+ QW R D R A+R DR D Sbjct 567 RYLSLPWMSDLLSDQRLGGGIAWATGEIPMIVVVVALLVQWGRHDDREAARLDRRFDKG- 625 Query 642 ADDELEAYNAMLRELSRMRR 661 DDE AYNAML L+ R+ Sbjct 626 EDDEFAAYNAMLANLAARRQ 645 >gi|302529062|ref|ZP_07281404.1| copper resistance transporter [Streptomyces sp. AA4] gi|302437957|gb|EFL09773.1| copper resistance transporter [Streptomyces sp. AA4] Length=670 Score = 379 bits (973), Expect = 9e-103, Method: Compositional matrix adjust. Identities = 248/636 (39%), Positives = 338/636 (54%), Gaps = 25/636 (3%) Query 45 SGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAF 104 +G Y AG P PG V A A +C+GAL+ P+ G + + Sbjct 39 TGGAGYVIAGLPDPGLVTRYGVTVVRVLAEAASVVCVGALLLAAFLVPPQKSGTLAPEGY 98 Query 105 RIHLLAERVSGL----WLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWI 160 A R +G+ W + V AA G +L+ L V A E + W+ Sbjct 99 A----AVRTAGIAAWAWFAASILSVAFTAADSAGKPFGDVLSPDTLLSLVGAIEQPKAWL 154 Query 161 VAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAV 220 A+ AL++A RL W VL +V +V AVTG+ G HD AT++ + V Sbjct 155 WTALIALLLALGCRLVLSWGWTAVLFFLSVAGLVPVAVTGHSASGGSHDLATNSLLFHLV 214 Query 221 AFATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARL-- 278 A A G +A G + + + LAL ++ I V + L Sbjct 215 AAALWVGGLLAVLALGWRRGKNLSLAAQRFSKLALVCWVVMAVSGIVNALVRINLGDLFT 274 Query 279 ---GLLAGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVM---- 331 GLL + ++ L + R G G+ L +AA+ + + Sbjct 275 TDYGLLVVAKIIALLLLGVFGQQQRSRGVANLVGELGGSQLLRLAAVEVLIMFVTIGIAS 334 Query 332 ------TAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAG 385 P +T T ++ +GYEL PPT R+LT WRFD + G +VLA Y AG Sbjct 335 GLARTPPPPDAVTQPGTV-ELLIGYELQGPPTFWRLLTDWRFDLIYGTLALVLAGLYLAG 393 Query 386 FAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLL 445 LR+RG+SWPVGR +AWL GC ++ + SG+ Y AMFSVHM HM L+M PVLL Sbjct 394 VRRLRKRGDSWPVGRTVAWLAGCLVILLATSSGIGRYAPAMFSVHMGNHMLLSMVAPVLL 453 Query 446 VLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFT 505 VLGGPVTLALR LP G PPG REWL +HS V+ FL++PI A +LFV S Y +YF+ Sbjct 454 VLGGPVTLALRALPPAGREAPPGPREWLLAAVHSPVSRFLTNPIVALLLFVGSFYALYFS 513 Query 506 PLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFF 565 LFD + YHW H M HFL+VGY+FYW +IG+DP PRRLP G++G++F MPFHAFF Sbjct 514 GLFDNALNYHWAHLAMNAHFLLVGYVFYWPVIGVDPAPRRLPPVGKLGMMFGAMPFHAFF 573 Query 566 GIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQ 625 G+ LM M + +G FY S+ LPW+ ++ DQ LGGGIAW+ E+PV++V++AL+ QWARQ Sbjct 574 GVILMNMQTVIGREFYTSLKLPWVGDLLTDQRLGGGIAWASGEVPVLLVLIALLVQWARQ 633 Query 626 DRRVASREDRHADSDYADDELEAYNAMLRELSRMRR 661 D R A R DR ++ +EL AYNAML+ L+ +R Sbjct 634 DEREAKRRDRREETT-GGEELAAYNAMLKNLAEGKR 668 >gi|134097908|ref|YP_001103569.1| copper resistance transporter [Saccharopolyspora erythraea NRRL 2338] gi|291007374|ref|ZP_06565347.1| copper resistance transporter [Saccharopolyspora erythraea NRRL 2338] gi|133910531|emb|CAM00644.1| probable copper resistance transporter [Saccharopolyspora erythraea NRRL 2338] Length=674 Score = 371 bits (952), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 245/633 (39%), Positives = 334/633 (53%), Gaps = 35/633 (5%) Query 50 YAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLL 109 YA G P PG PV A +C+G+L+ + G + A + Sbjct 48 YAAYGLPDPGPVTRFGLPVVRVIAESGAVVCIGSLLLAAFGIPAKRSGALAADGYAAVRA 107 Query 110 AERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVV 169 A + +W A MV AA +G +L + L V A E A+ W + A+ A V+ Sbjct 108 AGWAAAVWFVGAVLMVAFTAADASGRPVHEVLDTEVLFGLVDALEEAKAWGLTALIAFVL 167 Query 170 ATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLK 229 A A R+ W VL ++ + TG+ G HD AT++ + A G Sbjct 168 ALACRVVLTWGWTTVLFGGSLAGLFPVIATGHSATGGAHDIATNSLLFHLFGAALWVGGL 227 Query 230 IA--------AALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFAR---- 277 +A A G R + V A+A A G + + +P +D F+ Sbjct 228 VALLAHAVRGGAHLGLVARRYSAIALVCWIAMA-ASGVINSLVRVP---LDQLFSTTYGV 283 Query 278 ---LGLLAGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAA--------LAMMAAMASIA 326 L +LA V L F R A R GSGA L M A + Sbjct 284 LVTLKVLALVALGGFGYFQRQR-------AVRDIDRGSGALVRLGAVELLVMFATIGIAV 336 Query 327 AMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGF 386 A+ P L + ++ +GY L PPT+ R+L RFD + G + LA+ Y G Sbjct 337 ALGRTPPPAELGPVPSKTELLVGYPLEAPPTLFRLLFDVRFDLVYGTLAIALAVLYLVGV 396 Query 387 AALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLV 446 LR RG+ WPVGR AWL GCA ++ + +GV Y A+FSVHM +HM ++M P LLV Sbjct 397 RRLRARGDKWPVGRTAAWLCGCATILVATSAGVGKYAPAVFSVHMGQHMLMSMLAPPLLV 456 Query 447 LGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTP 506 LGGP +LALRVL G GRPPGAREWL LHS +T L++P A LFV S Y +YF+ Sbjct 457 LGGPTSLALRVLKPAGKGRPPGAREWLLAFLHSPLTRLLTNPFIALALFVGSFYALYFSG 516 Query 507 LFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFG 566 LFD + HW H M HFL+VGY+FYW +IG+DP P+ LP G++GL+FA MPFHAFFG Sbjct 517 LFDVALTQHWAHLAMNAHFLLVGYVFYWPVIGVDPAPKPLPSLGKVGLVFASMPFHAFFG 576 Query 567 IALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQD 626 IALM ++ +G FYRS+ LPW++ ++ADQ LGGG+AW+ E+P+I+V++AL+ QW+R D Sbjct 577 IALMMSATVIGQNFYRSLELPWMTDLLADQRLGGGLAWASGEVPLIVVMLALLIQWSRAD 636 Query 627 RRVASREDRHADSDYADDELEAYNAMLRELSRM 659 R A R DR AD+D D EL AYNAMLR+++ Sbjct 637 TRAARRMDRKADAD-GDAELTAYNAMLRQMAEQ 668 >gi|291010102|ref|ZP_06568075.1| copper resistance transporter [Saccharopolyspora erythraea NRRL 2338] Length=634 Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 174/334 (53%), Positives = 229/334 (69%), Gaps = 5/334 (1%) Query 328 MAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFA 387 MA P L V +GY+LP PP++ V+T WRFD ++G A VV+A YAAG Sbjct 305 MAHTPPPNLLARGVGPTAVVIGYDLPVPPSVLGVITTWRFDLVLGTAAVVMAALYAAGVR 364 Query 388 ALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVL 447 LRRRG++WPVGR +AWL GCA ++ + SG+ Y S MFS+HM HM LNM PVLLVL Sbjct 365 RLRRRGDAWPVGRTVAWLAGCATVLVATSSGLGVYSSGMFSMHMLVHMVLNMLAPVLLVL 424 Query 448 GGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPL 507 GGP+TLALR +P +G G P G REW+ + HS L++P A VLFV S Y +YFTPL Sbjct 425 GGPITLALRAIPPSGRGNPAGPREWVLAVTHSPPARALANPAVATVLFVGSFYALYFTPL 484 Query 508 FDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGI 567 F+ + HW HE M HFL+VGYL+YW +IG+DP PR LP+ R+G++FAVMPFHAFFG+ Sbjct 485 FEWAMAQHWAHELMNAHFLLVGYLYYWPVIGVDPAPRPLPHLARLGVVFAVMPFHAFFGV 544 Query 568 ALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDR 627 +M+ S+ + FYR+++LPW ++ADQ LGG IAW+ ELP+++V++AL+TQW R D Sbjct 545 IVMSTSTVIAENFYRTLDLPWAPDLLADQTLGGAIAWAGGELPLVLVLIALLTQWYRHDM 604 Query 628 RVASREDRHADSDYADDELEAYNAMLRELSRMRR 661 R RE+R D+EL AYNAML +L+ RR Sbjct 605 RQGRRENRS-----GDEELAAYNAMLAQLAESRR 633 >gi|134103051|ref|YP_001108712.1| copper resistance transporter [Saccharopolyspora erythraea NRRL 2338] gi|133915674|emb|CAM05787.1| probable copper resistance transporter [Saccharopolyspora erythraea NRRL 2338] Length=635 Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 174/334 (53%), Positives = 229/334 (69%), Gaps = 5/334 (1%) Query 328 MAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFA 387 MA P L V +GY+LP PP++ V+T WRFD ++G A VV+A YAAG Sbjct 306 MAHTPPPNLLARGVGPTAVVIGYDLPVPPSVLGVITTWRFDLVLGTAAVVMAALYAAGVR 365 Query 388 ALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVL 447 LRRRG++WPVGR +AWL GCA ++ + SG+ Y S MFS+HM HM LNM PVLLVL Sbjct 366 RLRRRGDAWPVGRTVAWLAGCATVLVATSSGLGVYSSGMFSMHMLVHMVLNMLAPVLLVL 425 Query 448 GGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPL 507 GGP+TLALR +P +G G P G REW+ + HS L++P A VLFV S Y +YFTPL Sbjct 426 GGPITLALRAIPPSGRGNPAGPREWVLAVTHSPPARALANPAVATVLFVGSFYALYFTPL 485 Query 508 FDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGI 567 F+ + HW HE M HFL+VGYL+YW +IG+DP PR LP+ R+G++FAVMPFHAFFG+ Sbjct 486 FEWAMAQHWAHELMNAHFLLVGYLYYWPVIGVDPAPRPLPHLARLGVVFAVMPFHAFFGV 545 Query 568 ALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDR 627 +M+ S+ + FYR+++LPW ++ADQ LGG IAW+ ELP+++V++AL+TQW R D Sbjct 546 IVMSTSTVIAENFYRTLDLPWAPDLLADQTLGGAIAWAGGELPLVLVLIALLTQWYRHDM 605 Query 628 RVASREDRHADSDYADDELEAYNAMLRELSRMRR 661 R RE+R D+EL AYNAML +L+ RR Sbjct 606 RQGRRENRS-----GDEELAAYNAMLAQLAESRR 634 >gi|256375263|ref|YP_003098923.1| copper resistance D domain-containing protein [Actinosynnema mirum DSM 43827] gi|255919566|gb|ACU35077.1| copper resistance D domain protein [Actinosynnema mirum DSM 43827] Length=687 Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 235/600 (40%), Positives = 326/600 (55%), Gaps = 23/600 (3%) Query 76 AGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGV 135 A L +G+L+ P+ G + A + A S +W A V A G Sbjct 53 AAVLTIGSLLLAAFLVPPQESGTLAADGYAALRTAAWASLVWTAGAVLSVPYTVADALGQ 112 Query 136 GPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVA 195 + LL L + V E +R W+V A+ +++A RL W VL +V A+V Sbjct 113 PLSALLDLSVLFEVVDVVEQSRAWMVTAVIVVLLALGCRLVLSWGWTTVLFFVSVFALVP 172 Query 196 TAVTGNPGQGPDHDYATSAAIVFAVAFATLTGLKIA--------AALAGTTPSRAVLVTQ 247 AVTG+ G HD AT++ + VA A G IA A G SR + Sbjct 173 VAVTGHSSGGGSHDVATNSLLYHLVAAALWVGGLIALLAHGRRRGAHLGLAASRFSSIAL 232 Query 248 VTCGALALAYGAMLLYLFIP-GWAVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGR 306 V C + G + Y+ +P + S++ L L L ++ +F L R + Sbjct 233 V-CWIVMAVSGVVNAYVRLPLDQLLTSEYGLLVLGKTAALLALGVFGY---LQRAKGVKQ 288 Query 307 RRGGGSGAALA---------MMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPT 357 GSG AL M+A + AA++ P + ++ +GY+L PT Sbjct 289 VVATGSGRALVRLAGVEVLLMLATIGLAAALSRTPPPTEGRTLPSPVELRIGYDLAGEPT 348 Query 358 IARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGS 417 + R+L WRFD + G + A+ Y G LR+RG++WPVGR IAW+ GC +VF + S Sbjct 349 LYRILFDWRFDLVYGTTFLAAAVVYLLGVRRLRKRGDAWPVGRTIAWVLGCLTVVFATSS 408 Query 418 GVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLL 477 G+ Y AMFSVHM HM L M P+LLVLG PVT+ALR LPV G G PPG REW+ L+ Sbjct 409 GLGRYSPAMFSVHMQAHMLLAMLAPILLVLGAPVTMALRALPVAGRGNPPGPREWVLALV 468 Query 478 HSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAII 537 HS V L++P A FV S Y +YF+ L+D + +HW H M HFL+ GY+FYW +I Sbjct 469 HSPVAKVLTNPFVALAFFVGSFYGLYFSGLYDVALDHHWAHLAMNAHFLMAGYVFYWPVI 528 Query 538 GIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQH 597 G+DP P +LP G++GLLFA +PFHAFFG+ LM+ +G+ FYR ++LPW+ S++ DQ Sbjct 529 GVDPAPNKLPPLGKLGLLFASLPFHAFFGVVLMSAQYVIGSDFYRKLSLPWVPSLLEDQR 588 Query 598 LGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELS 657 LGGGIAW+ ELP+++V+VAL+ QWAR D R A R DR AD+D D L AYN MLR ++ Sbjct 589 LGGGIAWAAGELPLLVVMVALLAQWARSDSRDAKRADRKADADGGAD-LAAYNEMLRRMA 647 >gi|325675997|ref|ZP_08155680.1| ABC superfamily ATP binding cassette transporter [Rhodococcus equi ATCC 33707] gi|325553235|gb|EGD22914.1| ABC superfamily ATP binding cassette transporter [Rhodococcus equi ATCC 33707] Length=676 Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 240/669 (36%), Positives = 344/669 (52%), Gaps = 17/669 (2%) Query 8 KSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEP 67 + T P P S + + A+ + V A +S ++ G P PG + P Sbjct 6 REQTEHAPVPSSRPGSGLFFAVSGVFAGLVAALVVAMSASQALVLMGIPDPGPLTTYGLP 65 Query 68 VGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVI 127 + +A + +G+L+ P+ G++D +R A + +W A +V + Sbjct 66 ALRAVSEIAAVIAIGSLLFAAFMVPPQKSGVLDIDGYRAVRTASHAAFVWAVSAVILVPL 125 Query 128 QAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLV 187 + +G A + L ++ E A W AI A+V+A R+ RW LL Sbjct 126 TLSDTSGQPFAEAVKPSNLFSAIGQVETAVAWQWTAIMAVVLAVLCRIALRWSWTPFLLA 185 Query 188 PTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA--------FATLTGLKIAAALAGTTP 239 V ++ A+TG+ G HD AT++ I V FA L + A Sbjct 186 LGVATMMPLALTGHSSSGGSHDVATNSLIWHLVGAAFWAGGLFALLAHARRRGAHTDVAA 245 Query 240 SRAVLVTQVTCGALALAYGAMLLYLFIP-GWAVDSDFARLGLLAGVILTSVWLFD-CWRL 297 R V + A+A++ G + + +P + + RL + V L + +F R Sbjct 246 RRFSFVATICFVAMAIS-GVVNALVRVPLDDLFSTTYGRLIVAKIVALVVLGVFGFLQRR 304 Query 298 LVRPPHAGRRRGGGS-----GAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYEL 352 P A G+ GA + AA IA T P + T +V LGY L Sbjct 305 RALPALAADPESRGALIRFAGAEALVFAATIGIAVGLGRTPPPPPSSVPTLTEVELGYNL 364 Query 353 PQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALV 412 PPT A+++ WRFD + G A +VLA+ Y G LR+RG+SWPVGR IAW GC L+ Sbjct 365 DGPPTFAKLMLDWRFDLIFGTAAIVLAVLYFVGLRTLRKRGDSWPVGRTIAWFAGCLVLL 424 Query 413 FTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREW 472 + SGV Y AMFSVHM HM L+M PVLLVLGGP TLALR + G PG REW Sbjct 425 IGTSSGVGRYAPAMFSVHMGAHMALSMLAPVLLVLGGPFTLALRAMRPAGKDGVPGPREW 484 Query 473 LTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLF 532 L LHS ++ FL+HP+ A VLFV Y +Y +F V H H M +HF++ GYLF Sbjct 485 LLAFLHSPISRFLTHPLVASVLFVGGFYALYLGGIFGANVDSHTAHLLMNVHFILSGYLF 544 Query 533 YWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSI 592 YW +IG+DP PR+L ++ ++F +PFHAFFGIALM+M +GATFYRS+ L W + + Sbjct 545 YWVVIGVDPSPRQLQPITKLAMVFGSLPFHAFFGIALMSMGEVMGATFYRSLGLDWNTDL 604 Query 593 IADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAM 652 + DQ LGG IAW+ E+P+++V++AL+ QW+R D++ A R DR A+ D D +L A+NAM Sbjct 605 LNDQQLGGSIAWATGEVPLVLVMLALLVQWSRSDQKTAKRVDRAAERD-DDADLAAHNAM 663 Query 653 LRELSRMRR 661 EL+R R Sbjct 664 FAELARRDR 672 >gi|312140393|ref|YP_004007729.1| integral membrane protein [Rhodococcus equi 103S] gi|311889732|emb|CBH49049.1| putative integral membrane protein [Rhodococcus equi 103S] Length=676 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 244/676 (37%), Positives = 349/676 (52%), Gaps = 27/676 (3%) Query 8 KSATSAVPTPRSNSMAMVRLAI-----GLLG--VCAVVAAFGLVSGARRYAEAGNPYPGA 60 + T P P S + + A+ GL+ V A+V A +S ++ G P PG Sbjct 2 REQTEHAPVPSSRPGSGLFFAVSGVFAGLVAGLVAALVVA---MSASQALVLMGIPDPGP 58 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 + P + +A + +G+L+ P+ G++D +R A + +W Sbjct 59 LTTYGLPALRAVSEIAAVIAIGSLLFAAFMVPPQKSGVLDIDGYRAVRTASHAAFVWAVS 118 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 A +V + + +G A + L ++ E A W AI A+V+A R+ RW Sbjct 119 AVILVPLTLSDTSGQPFAEAVKPSNLFSAIGQVETAVAWQWTAIMAVVLAVLCRIALRWS 178 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA--------FATLTGLKIAA 232 LL V ++ A+TG+ G HD AT++ I V FA L + Sbjct 179 WTPFLLALGVATMMPLALTGHSSSGGSHDVATNSLIWHLVGAAFWAGGLFALLAHARRRG 238 Query 233 ALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIP-GWAVDSDFARLGLLAGVILTSVWL 291 A R V + A+A++ G + + +P + + RL + V L + + Sbjct 239 AHTDVAARRFSFVATICFVAMAIS-GVVNALVRVPLDDLFSTTYGRLIVAKIVALVVLGV 297 Query 292 FD-CWRLLVRPPHAGRRRGGGS-----GAALAMMAAMASIAAMAVMTAPRFLTHAFTAWD 345 F R P A G+ GA + AA IA T P + T + Sbjct 298 FGFLQRRRALPALAADPESRGALIRFAGAEALVFAATIGIAVGLGRTPPPPPSSVPTLTE 357 Query 346 VFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWL 405 V LGY L PPT A+++ WRFD + G A +VLA+ Y G LR+RG+SWPVGR IAW Sbjct 358 VELGYNLDGPPTFAKLMLDWRFDLIFGTAAIVLAVLYFVGLRTLRKRGDSWPVGRTIAWF 417 Query 406 TGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGR 465 GC L+ + SGV Y AMFSVHM HM L+M PVLLVLGGP TLALR + G Sbjct 418 AGCLVLLIGTSSGVGRYAPAMFSVHMGAHMALSMLAPVLLVLGGPFTLALRAMRPAGKDG 477 Query 466 PPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHF 525 PG REWL LHS ++ FL+HP+ A VLFV Y +Y +F V H H M +HF Sbjct 478 VPGPREWLLAFLHSPISRFLTHPLVASVLFVGGFYALYLGGIFGANVDSHTAHLLMNVHF 537 Query 526 LVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVN 585 ++ GYLFYW +IG+DP PR+L ++ ++F +PFHAFFGIALM+M +GATFYRS+ Sbjct 538 ILSGYLFYWVVIGVDPSPRQLQPITKLAMVFGSLPFHAFFGIALMSMGEVMGATFYRSLG 597 Query 586 LPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDE 645 L W + ++ DQ LGG IAW+ E+P+++V++AL+ QW+R D++ A R DR A+ D D + Sbjct 598 LDWNTDLLNDQQLGGSIAWATGEVPLVLVMLALLVQWSRSDQKTAKRVDRAAERD-DDAD 656 Query 646 LEAYNAMLRELSRMRR 661 L A+NAM EL+R R Sbjct 657 LAAHNAMFAELARRDR 672 >gi|262201961|ref|YP_003273169.1| cytochrome C oxidase caa3-type, assembly factor CtaG-like protein [Gordonia bronchialis DSM 43247] gi|262085308|gb|ACY21276.1| Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein [Gordonia bronchialis DSM 43247] Length=675 Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 240/652 (37%), Positives = 350/652 (54%), Gaps = 32/652 (4%) Query 27 LAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIH 86 +AI + GV AV A AG P PGA + P +A A+ LG+ + Sbjct 38 MAIAVTGVSAVSA----------LQLAGVPDPGALTTYGVPAVTAIGEVAAAIALGSAVF 87 Query 87 VVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGAL 146 P+ DG++D FR +A + +W A M+ + ++ +G + + L Sbjct 88 AAFFVPPQGDGVLDVGGFRAIRVASSAALIWAICAVLMMPLSVSNVSGQPLSTTMRPDNL 147 Query 147 SDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGP 206 W+ AI A++ A R+ RW + + +VL+++ A+ G+ G Sbjct 148 IKVYGQVADVGTWMWTAIFAVIAAVVARVTLRWGLTFITIAFSVLSLMPVALAGHSSTGG 207 Query 207 DHDYATSAAIVFAVAFATLTGLKIAAALAGTTPS---RAVLVTQVT-----CGALALAYG 258 +HD AT++ I+ V ATL +AA + R++ V + + C + G Sbjct 208 NHDLATNSLILHIVG-ATLWMGGLAAVVTYALAMGRWRSLAVRRYSRVAFWCIVVVGVSG 266 Query 259 AMLLYLFIPGWAVDSD-FARLGLLAGVILTSVWLFDCW-------RLLVRPP--HAGRRR 308 + + +P + SD + RL L L + W RL PP A R Sbjct 267 VINALVRVPVGDLFSDTYGRLVLAKTAALVVLGALGAWHRRSTIARLESDPPGRSAFVRF 326 Query 309 GGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFD 368 G A+ +A ++ P + T + +GY L PP+ R++T WRFD Sbjct 327 GLVEVVVFALTFGLA--VGLSRTPPPDLASTDLTVVESEIGYRLDAPPSFGRIMTDWRFD 384 Query 369 SLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFS 428 + G +V A+ Y G LRRRG+ WPVGR +AWL GCA L+F + SG+ YG AMFS Sbjct 385 LIFGTFAIVAALVYLRGVVRLRRRGDGWPVGRTVAWLLGCALLLFATSSGLGRYGPAMFS 444 Query 429 VHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHP 488 VHM HM L+M IPVLLVLGGPVTLALR LP G G PPG REW+ +HS + FL+HP Sbjct 445 VHMIAHMMLSMMIPVLLVLGGPVTLALRALPPAGRGNPPGPREWIQAAIHSAPSRFLTHP 504 Query 489 ITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPY 548 + A V+FV S Y++Y LF+ V YH H M +HFL+ GYLFYW +IGIDP PR++ Sbjct 505 LVAAVMFVGSFYLLYLGGLFEAVVPYHAAHLLMNLHFLLSGYLFYWLVIGIDPAPRQVSP 564 Query 549 PGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTE 608 ++G+++ +PFHAFFG+ALM S+ + ++YR +NLPW S + ADQ +GGGIAW+ E Sbjct 565 VAKLGIVWGSLPFHAFFGVALMMTSAVIAESYYRGLNLPWNSDLYADQRVGGGIAWAAGE 624 Query 609 LPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 +P++++++AL+ QW R D R A R DR A+ D+ D EL YN ML++L+ R Sbjct 625 IPLVVIMLALLVQWRRTDDRQARRYDRRAERDH-DAELGDYNEMLKQLNSGR 675 >gi|324998091|ref|ZP_08119203.1| copper resistance transporter [Pseudonocardia sp. P1] Length=470 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 175/346 (51%), Positives = 232/346 (68%), Gaps = 3/346 (0%) Query 313 GAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIG 372 GA L + A +A + + PRF TA + +G+++ QP T +LT WR++ L G Sbjct 126 GAVLGALVATLGVAGIR-LVPPRFTGAGATALETLIGWDIEQPFTALTLLTHWRWNLLFG 184 Query 373 AAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMA 432 V+LA+ YA G L RG WPVGR AW+ GCA L+ + SG+ Y +MFSVHM Sbjct 185 TGAVLLAVLYAIGVHRLAGRGVRWPVGRTWAWMLGCATLLLATSSGLGFYSPSMFSVHMI 244 Query 433 EHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAF 492 HMTLNM P+LL LGG VTLALRVL G G PPG REWL +HSR+ L+HP A Sbjct 245 SHMTLNMLAPILLSLGGAVTLALRVLRPAGRGNPPGPREWLLAGVHSRIARVLTHPACAA 304 Query 493 VLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRI 552 VLFV S Y++YFTPLFD +R+HW H+ M +HF++VGYLF+W +IG+D P RLP+ GR+ Sbjct 305 VLFVGSFYVLYFTPLFDGALRFHWSHQLMNLHFVLVGYLFFWPLIGVDSAPHRLPHLGRL 364 Query 553 GLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVI 612 ++ A MPFHAFFGIA+M+ S +G FY V LPW+ ++ADQ +GGGIAW+ E+P++ Sbjct 365 AVMLATMPFHAFFGIAVMSSSEVLGRNFYAQVGLPWI-DLLADQKVGGGIAWATGEIPML 423 Query 613 MVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSR 658 +V+V LV QW+R D R A+R+DR A+ D D EL AYN ML +L + Sbjct 424 LVMVTLVVQWSRDDSREAARKDRQAERD-DDAELRAYNEMLSKLRQ 468 >gi|126436199|ref|YP_001071890.1| copper resistance D domain-containing protein [Mycobacterium sp. JLS] gi|126235999|gb|ABN99399.1| copper resistance D domain protein [Mycobacterium sp. JLS] Length=665 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 170/314 (55%), Positives = 226/314 (72%), Gaps = 1/314 (0%) Query 345 DVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAW 404 +V +GY+L PPT+ R+L WRFD ++G+A ++LA+ Y AG+ LRRRG++WP GR +AW Sbjct 349 EVEIGYDLAGPPTVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAWPAGRTVAW 408 Query 405 LTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDG 464 L GCA L+ T+ SG+ Y AMFSVHM HM L+M +P+LLVLG PVT+ALR LPV G G Sbjct 409 LLGCATLLITTSSGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKG 468 Query 465 RPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIH 524 +PPG REWL LHSRV+ L+HPI A LFVA Y +YF LF+ V H H M IH Sbjct 469 KPPGPREWLLAALHSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIH 528 Query 525 FLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSV 584 FL+ GYLFYW +IG+DP PRR+P ++ ++FA +P HAFFG+ LM M+S + FYRS+ Sbjct 529 FLLSGYLFYWVVIGVDPTPRRIPQLAKLAIVFASLPLHAFFGVVLMGMNSVLAEDFYRSL 588 Query 585 NLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADD 644 +L W + ++ADQ LGG IAW+ E+P+++V++AL+ QW R D R A R DR A+ D+ D Sbjct 589 HLSWHNDLLADQKLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRAAERDH-DA 647 Query 645 ELEAYNAMLRELSR 658 +L AYNAML EL+R Sbjct 648 DLAAYNAMLAELAR 661 >gi|108800583|ref|YP_640780.1| copper resistance D [Mycobacterium sp. MCS] gi|119869722|ref|YP_939674.1| copper resistance D domain-containing protein [Mycobacterium sp. KMS] gi|108771002|gb|ABG09724.1| copper resistance D [Mycobacterium sp. MCS] gi|119695811|gb|ABL92884.1| copper resistance D domain protein [Mycobacterium sp. KMS] Length=665 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 170/314 (55%), Positives = 226/314 (72%), Gaps = 1/314 (0%) Query 345 DVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAW 404 +V +GY+L PPT+ R+L WRFD ++G+A ++LA+ Y AG+ LRRRG++WP GR +AW Sbjct 349 EVEIGYDLAGPPTVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAWPAGRTVAW 408 Query 405 LTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDG 464 L GCA L+ T+ SG+ Y AMFSVHM HM L+M +P+LLVLG PVT+ALR LPV G G Sbjct 409 LLGCATLLITTSSGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKG 468 Query 465 RPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIH 524 +PPG REWL LHSRV+ L+HPI A LFVA Y +YF LF+ V H H M IH Sbjct 469 KPPGPREWLLAALHSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIH 528 Query 525 FLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSV 584 FL+ GYLFYW +IG+DP PRR+P ++ ++FA +P HAFFG+ LM M+S + FYRS+ Sbjct 529 FLLSGYLFYWVVIGVDPTPRRIPQLAKLAIVFASLPLHAFFGVVLMGMNSVLAEDFYRSL 588 Query 585 NLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADD 644 +L W + ++ADQ LGG IAW+ E+P+++V++AL+ QW R D R A R DR A+ D+ D Sbjct 589 HLSWHNDLLADQKLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRAAERDH-DA 647 Query 645 ELEAYNAMLRELSR 658 +L AYNAML EL+R Sbjct 648 DLAAYNAMLAELAR 661 >gi|226307325|ref|YP_002767285.1| hypothetical protein RER_38380 [Rhodococcus erythropolis PR4] gi|226186442|dbj|BAH34546.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=711 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 224/624 (36%), Positives = 326/624 (53%), Gaps = 19/624 (3%) Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 G P PG + P +A + +G+L+ P+ G++D +R A Sbjct 56 GIPDPGPITTYGLPAMRALGEIAAVIAIGSLLLAAFFVPPQKSGVLDVDGYRAVRTASHA 115 Query 114 SGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATAL 173 + +W + MV + + +G A + L + E+A W AI A+V+A Sbjct 116 AIVWAICSFMMVPLTLSDTSGQPFAEAIKPANLWSGLDQVEIAGAWRWTAIIAVVLAILA 175 Query 174 RLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA--------FATL 225 RL RW +LL+ +L ++ A+TG+ G HD AT++ I+ VA FA L Sbjct 176 RLTLRWWWTPLLLLVGLLGLMPLALTGHSSSGGSHDIATNSLILHLVAASLWAGGLFALL 235 Query 226 TGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAV-DSDFARLGLLAGV 284 + R V + C + G + + +P V + + RL ++A Sbjct 236 AHARRGGDYTDVAARRFSTVASI-CFVVMGFSGVINAIVRLPLDDVFTTTYGRL-IVAKT 293 Query 285 ILTSVWLFDCWRLLVR--PPHAGRRRGGGS-----GAALAMMAAMASIAAMAVMTAPRFL 337 + + F W R P A + + GA +MAA +A T P Sbjct 294 VALIILGFFGWAQRSRALPALAENPKSRSALIRFAGAETIVMAATIGLAIGLGRTPPPPP 353 Query 338 THAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWP 397 + +V LGY LP PP+ +T WRFD + G A + AI Y G L +RG+SWP Sbjct 354 LSIPSIPEVELGYNLPDPPSFMAFVTDWRFDLMFGTAAIAAAILYGIGLRKLAKRGDSWP 413 Query 398 VGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRV 457 VGR IAW++GCA L+ + SGV Y A+FSVHM HM L+M PVLLVLG P+TLALR Sbjct 414 VGRTIAWMSGCAVLLIATSSGVGKYAPAVFSVHMGAHMALSMLGPVLLVLGAPITLALRA 473 Query 458 LPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWG 517 L G PG REW+ LHS + F++HPI A VLFV Y +Y ++ V H Sbjct 474 LDPAGKDGVPGIREWILTALHSPFSRFITHPIVAAVLFVGGFYALYLGGIYGATVDSHSA 533 Query 518 HEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVG 577 H M +HF++ GYLFYW IGIDP PR+L ++ ++F +PFHAFFG+ALM+ ++ +G Sbjct 534 HLLMNLHFILSGYLFYWVAIGIDPSPRQLQPVTKLAMVFGSLPFHAFFGVALMSTTAVMG 593 Query 578 ATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHA 637 ++RS+ L W + +I DQ LGG IAW+ E+P+++V++AL+ QW+R D R A R DR A Sbjct 594 GAYFRSLGLGWNNDLIGDQQLGGSIAWATGEIPLMVVMLALLVQWSRSDGRTARRTDRAA 653 Query 638 DSDYADDELEAYNAMLRELSRMRR 661 + D+ D +L A+NAM EL+R R Sbjct 654 ERDH-DADLAAHNAMFAELARRDR 676 >gi|229494015|ref|ZP_04387784.1| ABC-type transporter, permease component [Rhodococcus erythropolis SK121] gi|229319084|gb|EEN84936.1| ABC-type transporter, permease component [Rhodococcus erythropolis SK121] Length=682 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 225/624 (37%), Positives = 326/624 (53%), Gaps = 19/624 (3%) Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 G P PG + P +A + +G+L+ P+ G++D +R A Sbjct 27 GIPDPGPITTYGLPAMRALGEIAAVIAIGSLLLAAFFVPPQKSGVLDVDGYRAVRTASHA 86 Query 114 SGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATAL 173 + +W + MV + + +G A + L + E+A W AI A+V+A Sbjct 87 AIVWAICSFMMVPLTLSDTSGQPFAEAIKPANLWSGLDQVEIAGAWRWTAIIAVVLAILA 146 Query 174 RLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA--------FATL 225 RL RW +LL+ +L ++ A+TG+ G HD AT++ I+ VA FA L Sbjct 147 RLTLRWWWTPLLLLVGLLGLMPLALTGHSSSGGSHDIATNSLILHLVAASLWAGGLFALL 206 Query 226 TGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAV-DSDFARLGLLAGV 284 + R V + C + G + + +P V + + RL ++A Sbjct 207 AHARRGGDYTDVAARRFSTVASI-CFVVMGFSGVINAIVRLPLDDVFTTTYGRL-IVAKT 264 Query 285 ILTSVWLFDCWRLLVR--PPHAGRRRGGGS-----GAALAMMAAMASIAAMAVMTAPRFL 337 + + F W R P A + + GA +MAA +A T P Sbjct 265 VALIILGFFGWAQRSRALPALAENPKSRSALIRFAGAEGIVMAATIGLAIGLGRTPPPPP 324 Query 338 THAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWP 397 + +V LGY LP PP+ +T WRFD + G A V AI Y G L +RG+SWP Sbjct 325 LSIPSIPEVELGYNLPDPPSFMAFVTDWRFDLMFGTAAVAAAILYGIGLRKLAKRGDSWP 384 Query 398 VGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRV 457 VGR IAW++GCA L+ + SGV Y A+FSVHM HM L+M PVLLVLG P+TLALR Sbjct 385 VGRTIAWMSGCAVLLIATSSGVGKYAPAVFSVHMGAHMALSMLGPVLLVLGAPITLALRA 444 Query 458 LPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWG 517 L G PG REW+ LHS + F++HPI A VLFV Y +Y ++ V H Sbjct 445 LDPAGKDGVPGIREWILTALHSPFSRFITHPIVAAVLFVGGFYALYLGGIYGATVDSHSA 504 Query 518 HEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVG 577 H M +HF++ GYLFYW IGIDP PR+L ++ ++F +PFHAFFG+ALM+ ++ +G Sbjct 505 HLLMNLHFILSGYLFYWVAIGIDPSPRQLQPVTKLAMVFGSLPFHAFFGVALMSTTAVMG 564 Query 578 ATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHA 637 ++RS+ L W + +I DQ LGG IAW+ E+P+++V++AL+ QW+R D R A R DR A Sbjct 565 GAYFRSLGLGWNNDLIGDQQLGGSIAWATGEIPLMVVMLALLVQWSRSDGRTARRTDRAA 624 Query 638 DSDYADDELEAYNAMLRELSRMRR 661 + D+ D +L A+NAM EL+R R Sbjct 625 ERDH-DADLAAHNAMFAELARRDR 647 >gi|111018405|ref|YP_701377.1| copper resistance transporter [Rhodococcus jostii RHA1] gi|110817935|gb|ABG93219.1| probable copper resistance transporter [Rhodococcus jostii RHA1] Length=676 Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 244/676 (37%), Positives = 353/676 (53%), Gaps = 19/676 (2%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 M T S ++ P R++S A+ + + G+ A + GL S A+ G P PG Sbjct 1 MATPQLAPSDPASKPPNRADSTALFVVGGLIAGLVAAIVV-GL-SAAQALVLLGIPDPGP 58 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 + P + +A + +G+L+ P+ G++D +R A + +W Sbjct 59 ITTYGLPAMRAVSEIAAVITIGSLLLAAFFVPPQKSGVLDVDGYRAVRTASYAAIVWAAT 118 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 A +V + + +G A + + +S+ E+A W AI A+V+A A RL RW Sbjct 119 ALVLVPLTLSDTSGQPFAEAVEPANIFNSIDQVELAGAWRWTAIIAIVLAIASRLVLRWW 178 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA--------FATLTGLKIAA 232 +LLV +L ++ A+TG+ G HD AT++ I+ VA FA L + Sbjct 179 WTPILLVVGILGLMPLALTGHSSSGGSHDMATNSLILHLVAASLWAGGLFALLAHARRRG 238 Query 233 ALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLF 292 A R V V +A++ L G VD+ + RL + V L + +F Sbjct 239 AYTDVAARRFSAVATVCFVVMAISGVVNALVRVQIGDLVDTTYGRLVVAKIVALVILGVF 298 Query 293 DCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTA-------PRFLTHAFTAWD 345 W R A ++ G G + A A + A + A P T A T + Sbjct 299 G-WAQRRRALPALQKDPAGRGNLIRFAGAEAMVFAATIGLAVGLGRTPPPPPTAAPTLTE 357 Query 346 VFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWL 405 V LGY L PPT +R++ WRFD L G A +VL + YA G LRRRG+SWPVGR +AW+ Sbjct 358 VELGYNLAGPPTFSRLMLDWRFDLLYGTAAIVLVVVYALGLRKLRRRGDSWPVGRTVAWM 417 Query 406 TGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGR 465 GC L+ + SGV Y A+FSVHM HM L+M PVLLVLG P+TLALR L G Sbjct 418 CGCVVLLVATSSGVGRYSPAVFSVHMGAHMALSMLTPVLLVLGAPITLALRALDPAGKNG 477 Query 466 PPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHF 525 PG REW+ LHS + F++HP+ A VLFV Y +Y +F+ V H H M +HF Sbjct 478 VPGLREWILTALHSPFSRFITHPVVAAVLFVGGFYALYLGGIFEAAVDSHSAHVLMNLHF 537 Query 526 LVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVN 585 L+ GYLFYW IG+DP PR+L ++ ++F +PFHAFFG+ALM+M + +G +YRS+ Sbjct 538 LLSGYLFYWVAIGVDPSPRKLQPVTKLAMVFGSLPFHAFFGVALMSMGAVMGEWYYRSLG 597 Query 586 LPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDE 645 L W + ++ DQ LGG IAW+ E+P+++V++AL+ QW+R D R A R A D + Sbjct 598 LGWNADLVGDQQLGGSIAWATGEIPLVLVMMALLIQWSRSDGRTARRV-DRAADRDDDAD 656 Query 646 LEAYNAMLRELSRMRR 661 L A+NAM EL+R R Sbjct 657 LAAHNAMFAELARRDR 672 >gi|331698569|ref|YP_004334808.1| cytochrome c oxidase caa3-type, assembly factor CtaG-like protein [Pseudonocardia dioxanivorans CB1190] gi|326953258|gb|AEA26955.1| Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein [Pseudonocardia dioxanivorans CB1190] Length=726 Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 248/654 (38%), Positives = 359/654 (55%), Gaps = 26/654 (3%) Query 28 AIGLLGVCA-----VVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLG 82 A GL+G+ A V +++GAR G P PG +VA P + ++ L +G Sbjct 20 AAGLIGLGAGIAMLVAGGLTVLTGARPATLLGLPDPGELTTVALPAVRALSEVSMVLTIG 79 Query 83 ALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLA 142 L+ +PDG +D + +R A + W A +V + A G ++L Sbjct 80 FLLLAAFFVPAQPDGYLDVSGYRAVRAASWTASAWFVCAVLLVPLNVADTLGRPVGQVLD 139 Query 143 SGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNP 202 G L D + A W + A+ AL+V A RL W VV + + A+TG+ Sbjct 140 PGLLFDLIPKISAAEAWSLTAVAALLVLVAARLVLSWGWAVVAFGLALFGPLPVALTGHS 199 Query 203 GQGPDHDYATSAAIVFAVAFATL--TGLKIAAALAGTTPSR---AVLVTQV--------T 249 G HD AT + +V V A+L GL LA + +R A L T V Sbjct 200 AAGGSHDIATDS-LVLHVLGASLWVGGLAAVVVLASSRSNRDRAAALATAVPRFSTLALV 258 Query 250 CGALALAYGAMLLYLFIPGWAV-DSDFARLGLLAGVILTSVWLFDCW--RLLVRPPHAGR 306 C AL G + + +P WAV +++ L + + L ++ + R V GR Sbjct 259 CWALLAVTGVVNALVRVPLWAVFTTEYGALVVAKTLALVTLGVLGALHRRRTVAAAAEGR 318 Query 307 RRGG---GSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLT 363 R G L M+A + A+ P + + +GY+L PPT+ R+L Sbjct 319 TRSLIALGGVEILLMLATIGLAVALGRSAPPDTGAPPPSILEAVIGYDLDGPPTLLRLLF 378 Query 364 VWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYG 423 WRF + G+ ++LA+GY AG LRRRG++WPVGR IAWL GC ++ + SG+ Y Sbjct 379 DWRFSLIYGSFAILLAVGYLAGLRRLRRRGDAWPVGRTIAWLCGCLVVLMATSSGIGRYA 438 Query 424 SAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTT 483 AMFSVHMA+HM L+M P+LLVLG PVTLALR LP +G GRP G REW+ +HS Sbjct 439 PAMFSVHMAQHMMLSMLAPILLVLGAPVTLALRALPPSGKGRPDGPREWILAAVHSPAAR 498 Query 484 FLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGP 543 +L++P+ LFV S Y +YF+ LF+T + HW H M HFL+VG+LF+W +IG+DP P Sbjct 499 WLTNPLITLPLFVGSYYALYFSSLFETSLNEHWAHLAMNAHFLLVGWLFFWPLIGVDPSP 558 Query 544 RRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIA 603 RRLP R+G++FA +PFHAFFG+ALM+ + +G +FYR ++LPW+ ++ DQ LGGG+ Sbjct 559 RRLPAVARLGVVFASVPFHAFFGVALMSQNEIIGGSFYRGLSLPWVPDLMRDQQLGGGLT 618 Query 604 WSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELS 657 W+ ELP+++V++ L+ QW+R D R A R+DR A+ D D +L+AYNAML L+ Sbjct 619 WASGELPLLLVVIVLLVQWSRHDERSARRDDRRAEVD-GDADLKAYNAMLNRLA 671 >gi|226360525|ref|YP_002778303.1| hypothetical protein ROP_11110 [Rhodococcus opacus B4] gi|226239010|dbj|BAH49358.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=676 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 248/676 (37%), Positives = 355/676 (53%), Gaps = 19/676 (2%) Query 1 MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGA 60 M T S ++ P R++S A+ + + G+ A + GL S A+ G P PG Sbjct 1 MATPQLAASGPASKPPNRADSTALFIVGGLIAGLVAAIVV-GL-SAAQALVLLGIPDPGP 58 Query 61 FVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGL 120 + P + +A + +G+L+ P+ G++D +R A + +W Sbjct 59 ITTYGLPAMRAVSEIAAVITIGSLLLAAFFVPPQKSGVLDVDGYRAVRTASYAAIVWAAT 118 Query 121 AATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 A +V + + +G + + +S+ E+A W AI A+V+A A RL RW Sbjct 119 ALVLVPLTLSDTSGQPFGEAVKPANIFNSIDQVELAGAWRWTAIIAIVLAIASRLVLRWW 178 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVA--------FATLTGLKIAA 232 +LLV VL ++ A+TG+ G HD AT++ I+ VA FA L + Sbjct 179 WTPILLVVGVLGLMPLALTGHSSSGGSHDMATNSLILHLVAASLWAGGLFALLAHARRRG 238 Query 233 ALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAGVILTSVWLF 292 A R V V +A++ L G VD+ + RL + V L + +F Sbjct 239 AYTDVAARRFSAVATVCFVVMAVSGVVNALVRVQIGDLVDTTYGRLVVAKIVALVVLGVF 298 Query 293 DCWRLLVRPPHAGRR----RGG---GSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWD 345 W R A ++ RG +GA + + AA +A T P T A T + Sbjct 299 G-WAQRRRALPALQKDPTSRGNLIRFAGAEVMVFAATIGLAVGLGRTPPPPPTAAPTLTE 357 Query 346 VFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWL 405 V LGY L PPT R++ WRFD L G A +VLA+ YA G LRRRG+SWPVGR +AW+ Sbjct 358 VELGYNLAGPPTFTRLMLDWRFDLLYGTAAIVLAVVYALGLRKLRRRGDSWPVGRTVAWM 417 Query 406 TGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGR 465 GC L+ + SGV Y A+FSVHM HM L+M PVLLVLG P+TLALR L G Sbjct 418 CGCVVLLIATSSGVGRYSPAVFSVHMGAHMALSMLAPVLLVLGAPITLALRALDPAGKNG 477 Query 466 PPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHF 525 PG REW+ LHS + F++HP+ A VLFV Y +Y +F+ V H H M +HF Sbjct 478 VPGLREWILTALHSPFSRFITHPVVAAVLFVGGFYALYLGGIFEAAVDSHSAHVLMNLHF 537 Query 526 LVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVN 585 L+ GYLFYW IGIDP PR+L ++ ++F +PFHAFFG+ALM+M + +G +YRS+ Sbjct 538 LLSGYLFYWVAIGIDPSPRKLQPVTKLAMVFGSLPFHAFFGVALMSMGAVMGEWYYRSLG 597 Query 586 LPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDE 645 L W + ++ DQ LGG IAW+ E+P+++V++AL+ QW+R D R A R A D + Sbjct 598 LGWNADLVGDQQLGGSIAWATGEIPLVLVMMALLIQWSRSDGRTARRV-DRAADRDDDAD 656 Query 646 LEAYNAMLRELSRMRR 661 L A+NAM EL+R R Sbjct 657 LAAHNAMFAELARRDR 672 >gi|296137824|ref|YP_003645067.1| cytochrome C oxidase caa3-type, assembly factor CtaG-like protein [Tsukamurella paurometabola DSM 20162] gi|296025958|gb|ADG76728.1| Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein [Tsukamurella paurometabola DSM 20162] Length=613 Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 214/591 (37%), Positives = 309/591 (53%), Gaps = 27/591 (4%) Query 45 SGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAF 104 G RY G+ YPGA + +G A ++A AL GAL + V KP+ G + + Sbjct 47 EGEIRYDINGDSYPGALTAYGASIGRLAGTVAAALTFGALGYAVFRTKPQDGGELGLRGY 106 Query 105 RIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAI 164 L A R + +W ++A M+++ A+ G G L V+ASE A+GWIV+ I Sbjct 107 VTQLHARRYAAVWAVVSAPMILLAASDSAGQDLVATYRVGGLFALVSASEAAKGWIVSLI 166 Query 165 CALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFAT 224 CA++V A+R W+ H+ +L+P + ++AT VT N QGP HDY+T+A I A+A A Sbjct 167 CAVIVIIAMRNCLTWVAHLWILLPAGIGLLATVVTANEAQGPKHDYSTAALITIALAGAL 226 Query 225 -LTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLLAG 283 L GL + L R T L LA GA+L ++ PG SD Sbjct 227 WLGGLWSSVRLPERPEKRW---TAPAFATLVLANGAVLAVVYAPG----SDLW------- 272 Query 284 VILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTA 343 + WL+ +L+ + + AA + A++ + A +++T P FL FT Sbjct 273 -VTWYGWLYIATAVLIAAAALAQYLRARAPAAGLLTASIGTALAASLLTPPPFLRKRFTV 331 Query 344 WDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIA 403 +VF+GY+LP PP R+ T+WRFD V++ +A G+ L RR SWP R Sbjct 332 GEVFMGYDLPDPPNALRLATLWRFDLNF----VLIVAAFAVGYLLLVRRTTSWPWYRTAC 387 Query 404 WLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGD 463 +L GC AL+ + SGV Y AMFSVHM HM + +PV L+LG P+TL L T Sbjct 388 FLFGCFALLVLTSSGVSTYSKAMFSVHMVSHMLMTSLVPVFLLLGAPITL----LRDTLT 443 Query 464 GRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAI 523 G P + WL L S+ L P ++F Y +YFTPLFD RYHWGH + + Sbjct 444 GAP---KRWLELFLESKSFVVLMRPAVQLLMFALMLYGLYFTPLFDRIGRYHWGHLGINL 500 Query 524 HFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRS 583 L G+LFYW + IDP P+ LP+ GRIG+L A+MP F + +MTM VG+ Y Sbjct 501 ALLFTGFLFYWRVFQIDPVPKELPFIGRIGMLLAMMPISMVFALIVMTMDGLVGSRLYYY 560 Query 584 VNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASRED 634 ++L W++ + DQ +GG AW++ E + +V + LV WA Q+R S + Sbjct 561 LDLSWMTDLQRDQFVGGVAAWAVDEAAIALVTLGLVLHWAWQNRGEDSEPE 611 >gi|319947998|ref|ZP_08022175.1| integral membrane protein [Dietzia cinnamea P4] gi|319438344|gb|EFV93287.1| integral membrane protein [Dietzia cinnamea P4] Length=676 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 216/634 (35%), Positives = 315/634 (50%), Gaps = 35/634 (5%) Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 G P PG + P L ++ +GA + P+ D +D +R+ ++ Sbjct 50 GVPDPGVLTTAGLPALRSIGELLASVAVGAALFAAFFTPPQKDKTLDVDGYRMQQISSWA 109 Query 114 SGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATAL 173 + W AA ++ + + +G + L ++ ++A W AAI ALV Sbjct 110 NIAWAVAAALLIPLTLSDVSGRTFFQSLPPDQWLVAINQIDVASSWRWAAIIALVAGIGQ 169 Query 174 RLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVF-------------AV 220 RL W V+ L T L+++ A TG+ HD AT++ I+ + Sbjct 170 RLTLSWRWSVIWLAVTALSLLPVAATGHASGSTAHDIATNSLIIHLFGAACYIGGLVAVI 229 Query 221 AFATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGL 280 A + G ++A AL R V V AL L+ + P S + L + Sbjct 230 AHTWVGGTRVALAL-----RRYSAVATVAIIALGLSGVINAIVRLHPADLFTSTYGLLVV 284 Query 281 LAGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAAL-------------AMMAAMASIAA 327 ++L + LF L VR R G+ A + +MA ++ Sbjct 285 CKALVLCLLALFG---LAVRRRVINRIESKGANAPVDRATMLRIILTESVIMAGTIGLSV 341 Query 328 MAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFA 387 T P + T + LG+ELP P V WRFD ++G A V+L Y G Sbjct 342 SLGRTPPPAPLYVPTRQEALLGFELPGPFGFGTVFGTWRFDLVLGLAAVILLGLYLWGLF 401 Query 388 ALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVL 447 LRRRG+SWP GR W++GC L T+ SG+ + A F+ HM HM ++M +PVLL L Sbjct 402 TLRRRGDSWPAGRTAFWVSGCVILFLTTSSGMGMFMMADFASHMVGHMIISMLVPVLLAL 461 Query 448 GGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPL 507 GGP TLALR LP G G PPG REWL ++S ++ FL+HP+ A V FVA YI+YF Sbjct 462 GGPFTLALRALPAAGRGNPPGPREWLVEFINSPISRFLTHPVVASVQFVAGFYIIYFGGF 521 Query 508 FDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGI 567 ++T H GH FM +HFL+ GYLFYW IIG+D PR ++ +L + +PFHAFFGI Sbjct 522 YETLASEHLGHMFMNVHFLISGYLFYWVIIGVDAAPRHFSPMYKLMVLLSSLPFHAFFGI 581 Query 568 ALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDR 627 LM + + +Y + LPW+ ++ Q +GGG+AW++ E+P+++V++AL QW + D Sbjct 582 LLMNYPTVLAEGWYSGIGLPWIPDLLQSQRVGGGVAWAMGEIPLVIVMLALAWQWYQSDM 641 Query 628 RVASREDRHADSDYADDELEAYNAMLRELSRMRR 661 R A R +R AD D D EL AYN ML E+SR R Sbjct 642 REARRGERQADRD-DDAELRAYNEMLAEMSRADR 674 >gi|54023269|ref|YP_117511.1| hypothetical protein nfa13020 [Nocardia farcinica IFM 10152] gi|54014777|dbj|BAD56147.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=683 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/314 (51%), Positives = 218/314 (70%), Gaps = 1/314 (0%) Query 345 DVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAW 404 +V LGY+L PPT+AR+L WRFD + G +VLA+ Y G L RG+SWPVGR IAW Sbjct 361 EVELGYDLAGPPTVARMLFDWRFDLIFGTLAIVLAVLYLLGVRRLHARGDSWPVGRTIAW 420 Query 405 LTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDG 464 L CA L+ T+ SG+ Y AMFSVHM +HM L+M P+L LGG VTLALR LP G G Sbjct 421 LCACALLLVTTSSGIGRYAPAMFSVHMMQHMALSMLAPILFALGGVVTLALRALPPAGRG 480 Query 465 RPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIH 524 PG REW+ +H+ V+ FL+HPI A V+FVA Y +Y ++DTFV H H M +H Sbjct 481 GVPGPREWILAAVHNPVSRFLTHPIVASVIFVAGFYALYMGGIYDTFVDSHGAHLLMNLH 540 Query 525 FLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSV 584 FL+ GYLFYW +IGIDP PR++ ++G++F +PFHAFFG+ALM+M++ +G F+RS+ Sbjct 541 FLLSGYLFYWVVIGIDPKPRQVEPLTKLGMVFGSLPFHAFFGVALMSMTTVMGGWFFRSL 600 Query 585 NLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADD 644 +L W ++ DQ GG +AW+ E+P+++V++AL+ QW+R D R+A R DR A+ D+ D Sbjct 601 DLGWNGDLLGDQRTGGSLAWASGEVPLVVVMLALLIQWSRSDERMAKRYDRAAERDH-DA 659 Query 645 ELEAYNAMLRELSR 658 EL A+NAM EL+R Sbjct 660 ELAAHNAMFAELAR 673 >gi|333990066|ref|YP_004522680.1| ABC transporter permease [Mycobacterium sp. JDM601] gi|333486034|gb|AEF35426.1| ABC-type transporter permease component [Mycobacterium sp. JDM601] Length=669 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 167/313 (54%), Positives = 212/313 (68%), Gaps = 1/313 (0%) Query 346 VFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWL 405 V +GY+ PPT+AR+L WRFD + G A VVLA Y AG LRRRG++WP GR AWL Sbjct 351 VKIGYDFAGPPTVARILFDWRFDVIFGTAAVVLAAVYLAGVLRLRRRGDAWPAGRTTAWL 410 Query 406 TGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGR 465 GCA L+ + SG Y AMFS+HM HM L+M +P+LLVLGGP TLALR LP G G Sbjct 411 LGCATLLVATSSGTGRYMPAMFSMHMVVHMLLSMLVPILLVLGGPTTLALRALPAAGRGE 470 Query 466 PPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHF 525 PPG REWL LHSRV+ FL++PI A V+FVA Y +YF+ +FD+ V H GH M +HF Sbjct 471 PPGMREWLLAALHSRVSRFLTNPIIAAVIFVAGFYGLYFSTIFDSIVGSHAGHVAMNVHF 530 Query 526 LVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVN 585 ++ GYLFYW +IG+DP PR + R+ ++FA +P H FFG+ LM M +G FY S+ Sbjct 531 MLSGYLFYWVVIGVDPTPRPISPLARLAVVFASLPMHGFFGVLLMGMHKVLGEWFYASLG 590 Query 586 LPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDE 645 LPW + + DQHLGGGI W+ ELP++MV++AL+ QW R D R A R DR + D E Sbjct 591 LPWHTDLAGDQHLGGGITWAAGELPLVMVMIALLVQWHRSDSRTAKRTDR-SADRDDDAE 649 Query 646 LEAYNAMLRELSR 658 L AYNAML E++R Sbjct 650 LAAYNAMLAEVAR 662 >gi|342857875|ref|ZP_08714531.1| ABC transporter permease [Mycobacterium colombiense CECT 3035] gi|342135208|gb|EGT88374.1| ABC transporter permease [Mycobacterium colombiense CECT 3035] Length=688 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 164/311 (53%), Positives = 211/311 (68%), Gaps = 1/311 (0%) Query 348 LGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTG 407 +GY+ PPT+AR+L WRFD + G A +V A YAA LRRRG++WP GR ++WL G Sbjct 364 IGYDFDGPPTVARILFDWRFDLIFGTAALVFAALYAAALVRLRRRGDTWPPGRTVSWLLG 423 Query 408 CAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPP 467 C L+F + SGV Y AMFS+HM HM L+M IP+LLVLG PVTLALR LP G PP Sbjct 424 CLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLIPILLVLGAPVTLALRALPAAGRDDPP 483 Query 468 GAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLV 527 G REWL LHSR + FL++P+ A VLFVA Y +Y + LFDT H GH M +HFLV Sbjct 484 GMREWLLTALHSRFSRFLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLAMNVHFLV 543 Query 528 VGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLP 587 GYLFYW +IG+DP PR +P ++ ++FA +P HAFFG+ LM +GA +YRS+ L Sbjct 544 SGYLFYWVVIGVDPTPRPIPPLAKVAVVFASLPLHAFFGVVLMGTKKVLGADYYRSLGLS 603 Query 588 WLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELE 647 W + ++ DQHLGGGIAWS E P+++V++AL+ QWAR DRR A + A D EL Sbjct 604 WHTDLLGDQHLGGGIAWSAGEFPLVIVMLALLIQWARSDRRTA-KRLDRAADRDDDAELV 662 Query 648 AYNAMLRELSR 658 AYNAML +L++ Sbjct 663 AYNAMLAQLAQ 673 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/193 (27%), Positives = 82/193 (43%), Gaps = 2/193 (1%) Query 29 IGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVV 88 +G L C A G +S A G P PG ++ P A +A L +G+ + Sbjct 29 VGALAGC-TAAGIGTLSLASALTVTGLPDPGQVTTLGLPFVRAAGEIAAVLAVGSFLFAA 87 Query 89 MTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSD 148 P+ +G++DA +R L SG+W AA +V + + +G P + + + Sbjct 88 FLVPPQRNGVLDADGYRALRLGTVASGVWAVCAALLVPLTISDVSG-HPVADIPAMRMWS 146 Query 149 SVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDH 208 A W AI A V+ A RW VL +V+ ++ +TG+ G H Sbjct 147 LAGLITTASAWRWTAIVAAVITLASLSVLRWSWTPVLFAASVMTLIPLGLTGHSSAGGSH 206 Query 209 DYATSAAIVFAVA 221 D AT+ ++ VA Sbjct 207 DLATNGLLIHLVA 219 >gi|118472771|ref|YP_888963.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118174058|gb|ABK74954.1| ABC-type transporter, permease components [Mycobacterium smegmatis str. MC2 155] Length=666 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/327 (50%), Positives = 220/327 (68%), Gaps = 1/327 (0%) Query 332 TAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRR 391 T P + +A +V +GY+ PPT+ARVL WRFD L G A +V A+ Y A LR Sbjct 335 TPPPPIKRIPSAAEVAIGYDFAGPPTVARVLFDWRFDLLFGTAAIVGALVYLAALYRLRH 394 Query 392 RGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPV 451 RG++WPVGR +AWL GCA L+FT+ SG+ Y AMFS+HM HM L+M +P+LLVLG PV Sbjct 395 RGDAWPVGRTVAWLLGCATLLFTTSSGLGRYMPAMFSMHMIAHMLLSMLVPILLVLGAPV 454 Query 452 TLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTF 511 T+ALR LP G G+PPG REWL LHS+++ F ++P+ A V+FV Y +YF +FD Sbjct 455 TMALRALPAAGRGQPPGPREWLLAALHSKISQFFTNPVIATVMFVVGFYGLYFGGIFDAA 514 Query 512 VRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMT 571 V H H M +HFL+ GYLFYW +IGIDP PR +P+ G+IG++FA +P HAFFG+ +M Sbjct 515 VSNHAAHVMMNVHFLLSGYLFYWVVIGIDPTPRPIPHLGKIGMVFASLPLHAFFGVVMMG 574 Query 572 MSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVAS 631 M + +G FYRS+ L W + ++ DQ LGGG+AW+ E+P+++V++AL+ QW R D R A Sbjct 575 MKTVLGEPFYRSLQLSWHTDLLGDQKLGGGVAWAAGEVPLVIVMLALLIQWRRSDDRTA- 633 Query 632 REDRHADSDYADDELEAYNAMLRELSR 658 + A D +L AYN ML L+R Sbjct 634 KRLDRAADRDDDADLAAYNRMLAHLAR 660 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/174 (26%), Positives = 76/174 (44%), Gaps = 0/174 (0%) Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 G P PG + P A +A + +G+ + P+ +G++D A +R L Sbjct 39 GLPNPGPVTTYGLPFVRAAGEIAAVIAVGSFLFAAFLVAPQENGVLDVAGYRALRLGSAA 98 Query 114 SGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATAL 173 S +W AA +V + + +G L+ + + + ++A W AI A V A Sbjct 99 SAVWTVCAAMLVPLTISDVSGQPVLEHLSPVDVWSATSLVDIAGAWRWTAILAAAVTIAS 158 Query 174 RLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTG 227 RW VL +++ +V A+TG+ G HD AT++ + VA A G Sbjct 159 LPVLRWGWTPVLFAGSLVTLVPLALTGHSSSGGAHDLATNSLFIHLVAGAVWAG 212 >gi|258652032|ref|YP_003201188.1| copper resistance D domain-containing protein [Nakamurella multipartita DSM 44233] gi|258555257|gb|ACV78199.1| copper resistance D domain protein [Nakamurella multipartita DSM 44233] Length=686 Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 167/343 (49%), Positives = 222/343 (65%), Gaps = 1/343 (0%) Query 316 LAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAG 375 L M A + +A+A P A + ++ LG+ L PPT + WRFD L+G A Sbjct 338 LIMAATIGVASALARTATPPPSGAAPSDLELALGFSLDGPPTPLSLALGWRFDWLLGTAS 397 Query 376 VVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHM 435 VV A+ Y G LRR G WP GR AWL GCA L+ + SG+ YG A FS+HM EHM Sbjct 398 VVAAVLYLIGVRRLRRNGVYWPPGRTAAWLVGCAMLLIATSSGLARYGIAEFSMHMIEHM 457 Query 436 TLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLF 495 L M P+LLVLGGPVTL LR LP G + PG RE + +HSR F++HPI FVLF Sbjct 458 VLGMVAPILLVLGGPVTLTLRALPAAGRDQVPGLREGIVSAMHSRFVRFVTHPIVVFVLF 517 Query 496 VASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLL 555 V S Y++YFTPLF+ + H GH M++HFLVVGYL+YW IIG+DP PR+L ++ +L Sbjct 518 VVSFYLLYFTPLFEIMITSHVGHVLMSVHFLVVGYLYYWVIIGVDPAPRQLSPFVKLAML 577 Query 556 FAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVI 615 +PFHAFFG+ALM + + A +Y + LPW++ ++A+Q LGG IAW TE+P+I+V+ Sbjct 578 LGALPFHAFFGLALMNSHTAMAADYYTGLGLPWVTDLVAEQRLGGAIAWGATEIPIIIVM 637 Query 616 VALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSR 658 +AL++QWAR D + A R DR D AD+EL+AYN ML +L+ Sbjct 638 IALLSQWARSDEKEARRSDRKGDRG-ADEELDAYNRMLAQLAE 679 >gi|333918729|ref|YP_004492310.1| copper resistance transporter [Amycolicicoccus subflavus DQS3-9A1] gi|333480950|gb|AEF39510.1| Copper resistance transporter [Amycolicicoccus subflavus DQS3-9A1] Length=690 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 224/621 (37%), Positives = 324/621 (53%), Gaps = 19/621 (3%) Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 G P PG P +A + +G + P+ G++D +R + Sbjct 65 GIPDPGVATRYGLPAVQSVGYVAAVVAIGCALLAAFLVPPQSSGVLDVGGYRAMRVCGGA 124 Query 114 SGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATAL 173 + +W A MV + + +G G + L S+ + A W + A +A Sbjct 125 AAIWAACAFLMVPLTLSDVSGAGFLEAVRPENLWPSLPRVDTALAWAWTGVFAAALAMLS 184 Query 174 RLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATS--------AAIVFAVAFATL 225 R RW LL ++ ++ +TG+ G HD AT+ A++ FA L Sbjct 185 RAVLRWSWTPALLALSLFTLMPLVLTGHSASGGSHDVATNSLFWHIVGASLWMGGLFAVL 244 Query 226 TGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSD-FARLGLLAGV 284 R L+ ++ A+ L+ G + ++ I + SD + R+ L+ V Sbjct 245 MHAWHGGEHRALVVRRYSLLAGISFAAVGLS-GIVNAFVRIELGDLLSDAYGRIVLVKAV 303 Query 285 ILTSVWLFDCW---RLLVRPPH-AGRRRGGGSGAALAMMAAMASIAAMAV---MTAPRFL 337 L + +F W R +V H GR R A+A +A+ +AV T P Sbjct 304 ALVVLGVFG-WTQRRRVVGVLHRDGRARTPFVTLAIAEFFILAATFGLAVALGRTPPPAP 362 Query 338 THAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWP 397 + T +V LGY L PT AR++ WRFD + G +VLA+ YA G L RG++WP Sbjct 363 SSVPTLMEVELGYNLEGSPTFARLMLDWRFDLIFGTLAIVLAVLYAFGVRKLNARGDAWP 422 Query 398 VGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRV 457 +GR IAWL+GC L+ + SG+ Y AMFSVHM HM L+M +PVLLVLGGPVTLALR Sbjct 423 IGRTIAWLSGCVVLLIATSSGIARYAPAMFSVHMGSHMLLSMLVPVLLVLGGPVTLALRA 482 Query 458 LPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWG 517 L G G PG REW+ ++S V+ FL+ P+ A +LFVA Y +YF +FD +V H Sbjct 483 LKPAGKGSVPGPREWILAAVNSPVSRFLTQPVIAAILFVAGFYGLYFGGIFDAYVGSHAA 542 Query 518 HEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVG 577 H M +HFL+ GYLFYW +IG+D P + ++G+L+A +PFHAFFGIALM M + +G Sbjct 543 HILMNLHFLLSGYLFYWVVIGVDQSPHPMQPLAKLGVLWATLPFHAFFGIALMNMETVMG 602 Query 578 ATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHA 637 FY+ +NLPW+ ++ADQ +GGG+AW E+P+I+V++AL+ QW+R DRR A R Sbjct 603 GWFYQQLNLPWVPDLLADQRVGGGLAWGTGEMPLIIVMLALLVQWSRTDRRFA-RRMDRV 661 Query 638 DSDYADDELEAYNAMLRELSR 658 D L AYNAM EL+R Sbjct 662 ADKDDDAALAAYNAMFAELAR 682 >gi|315443610|ref|YP_004076489.1| hypothetical protein Mspyr1_19960 [Mycobacterium sp. Spyr1] gi|315261913|gb|ADT98654.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=676 Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 226/653 (35%), Positives = 323/653 (50%), Gaps = 72/653 (11%) Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 G P PG S P A +A + +G + P+ + ++DAA +R + Sbjct 48 GLPDPGPVTSYGSPFVRAAGEIAAVVAVGGFLFAAFMVPPQHNQVLDAAGYRALRMGTAA 107 Query 114 SGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATAL 173 SG+W A MV + + +G + ++ + ++A W A+ A +V Sbjct 108 SGIWTVCAVLMVPLTVSDVSGQPLSTRMSPADIWSVADLIDIAGAWRWTALFAALVTVVS 167 Query 174 RLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDH------------------------- 208 RW VLL +++ ++ A++G+ G H Sbjct 168 IPVLRWSWTPVLLAGSLITLLPIALSGHSSSGGAHDIATNSLTAHMLAGALWAGGLLALL 227 Query 209 -----------DYATSAAIVF-AVAFATLTGLKIAAALAGTTPSRAVLVTQVTCGALALA 256 D+A AA F AVA + ++ + R + T G L LA Sbjct 228 VHALRGSDDGDDHAALAARRFSAVALWCFVAMALSGTINALVRVRPADLVTTTYGTLLLA 287 Query 257 YGAMLLYLFIPGW--------AVDSDFARLGLLAGVILTSVWLFDCWRLLVRPPHAGRRR 308 A L+ L + GW A+ +D G L + L +F Sbjct 288 KIAALVALGVLGWQQRRRGVAALQADPRARGPLIRLALVEAAVF---------------- 331 Query 309 GGGSGAALAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFD 368 G G A+A+ ++ P V +GY+L PPT+ R+L WRFD Sbjct 332 GLTFGVAVALGRTPPPPPLNPNLSIP----------AVEIGYDLDGPPTLGRLLFDWRFD 381 Query 369 SLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFS 428 ++G A +VLA+ Y AG LRRRG++WP GR++AWL GC L+ + SG Y AMFS Sbjct 382 LVLGTAAIVLALVYLAGVRRLRRRGDAWPTGRVVAWLLGCLVLLLATSSGFGRYMPAMFS 441 Query 429 VHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHP 488 +HM HM L+M P+LLVLG PVTLALR LPV G PG REWL LHSRV+ FL++P Sbjct 442 IHMIAHMMLSMLAPILLVLGAPVTLALRALPVAGRTGAPGPREWLLAALHSRVSQFLTNP 501 Query 489 ITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPY 548 A LFV Y +YF+ LFD H H M +HFL+ GYLFYW +IG+DP PR +P+ Sbjct 502 FVATGLFVVGFYGLYFSGLFDAAAGSHAAHVAMNVHFLLSGYLFYWVVIGVDPTPRPIPH 561 Query 549 PGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTE 608 ++G++FA +P HAFFG+ LM S + +FYRS+ LPW + ++ADQ +GGGIAW+ E Sbjct 562 LAKLGMVFASLPLHAFFGVVLMGTQSVLAESFYRSLQLPWHTDLLADQRVGGGIAWAAGE 621 Query 609 LPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMRR 661 +P+++V++AL QW R D R+A R A D +L AYN ML EL+R R Sbjct 622 VPLVVVLIALFIQWRRTDDRIARRL-DRAADRDDDADLAAYNNMLAELARRER 673 >gi|256376889|ref|YP_003100549.1| copper resistance D domain-containing protein [Actinosynnema mirum DSM 43827] gi|255921192|gb|ACU36703.1| copper resistance D domain protein [Actinosynnema mirum DSM 43827] Length=632 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 260/645 (41%), Positives = 346/645 (54%), Gaps = 38/645 (5%) Query 29 IGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVV 88 + +L V AVV A G V G G+ PG V A AG++ GAL Sbjct 13 LAVLCVTAVVLAAGDVHGV-----LGDSDPGRVAGWLLGVVRLVADGAGSVTAGALAFAA 67 Query 89 MTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSD 148 A DG + A A+ LA S +WL A V + A +G + + A+ L+ Sbjct 68 FVAPGRRDGKLTADAYAALRLAALASPVWLVAALAAVPLAAGDASGQPQSVVWAN--LAG 125 Query 149 SVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDH 208 V A++ + W+V ++ VV R+ W V LV +VLA++ V G+ G H Sbjct 126 LVDATDEPKAWLVTSVVVAVVVWGSRVTLTWPTTVTWLVLSVLALLPPVVMGHVSGGAWH 185 Query 209 DYATSAAIVFAVAFATLTG--LKIAAALAGTTPSRAVL------VTQVTCGALALAYGAM 260 D AT+A + A A G + + + L P R + VT V +AL+ Sbjct 186 DVATNAVLWHVPAAAVWVGSLVALCSFLRRGGPDRERVLGRYRRVTAVCLVVVALSGSVA 245 Query 261 LLYLFIPGWAVDSDFARLGLLAGV-ILTSVWLFDCWRLLVRPPHAGRRRGGG----SGAA 315 L L P GLL+G L V L C +L A R R G + Sbjct 246 GLALATPS----------GLLSGFGALLGVKLLVCLLVLGSRGRAVRTRWGARWPLAVEV 295 Query 316 LAMMAAMASIAAMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAG 375 +A+ AM + A +A + PR+ + +A + LGYELP P + +L WRFD +IG Sbjct 296 VALGVAMGASAGLAHLVPPRWTSTRPSARETVLGYELPAGPGFSEILVGWRFDLVIGLGA 355 Query 376 VVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHM 435 V+ A+ Y G LRRRG++WP R+ AWL GC L+ + SGV Y AMFS HM HM Sbjct 356 VLAALLYLRGVRVLRRRGDAWPSHRVAAWLGGCLVLLLATSSGVGRYAPAMFSAHMVAHM 415 Query 436 TLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLF 495 +L M PVLLVLGGPVTLALR LP PG R W+ LLH R T +SHP A V+F Sbjct 416 SLTMLAPVLLVLGGPVTLALRALP-------PGPRAWVVALLHCRWTRIVSHPAFAAVVF 468 Query 496 VASPYIVYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLL 555 VAS Y++YF+PLF + HW H M +HFL+ GY+FYW +IG+D PR LP+ R+G+L Sbjct 469 VASFYVLYFSPLFGEAMGQHWAHVLMNVHFLMTGYVFYWLVIGVDRPPRPLPHLARLGML 528 Query 556 FAVMPFHAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVI 615 FAVMPFHAFFG+ LM S + + YR V LPWL ++ADQ LGGGIAW+ E+P+++V+ Sbjct 529 FAVMPFHAFFGVILMNGQSVIAESHYREVALPWLPDLMADQRLGGGIAWATGEIPMLVVV 588 Query 616 VALVTQWARQDRRVASREDRHADSDYADDELEAYNAMLRELSRMR 660 +AL+ QWA DR+ A R DR D D D+ L AYNAML ELS R Sbjct 589 IALMAQWAAADRKEAVRMDR-RDDDDEDERLAAYNAMLAELSERR 632 >gi|254774512|ref|ZP_05216028.1| hypothetical protein MaviaA2_07553 [Mycobacterium avium subsp. avium ATCC 25291] Length=689 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 159/310 (52%), Positives = 205/310 (67%), Gaps = 1/310 (0%) Query 348 LGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTG 407 +GY+ PPT+ R+L WRFD + G A +VLA Y AG LRRRG+ WP GR +WL G Sbjct 367 IGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGLYVAGVVRLRRRGDRWPPGRTSSWLLG 426 Query 408 CAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPP 467 C L+F + SGV Y AMFS+HM HM L+M +P+LL LG PVTLALR LP G G PP Sbjct 427 CLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAAGRGDPP 486 Query 468 GAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLV 527 G REWL LHSR + L++P+ A VLFVA Y +Y + LFDT H GH M +HFL+ Sbjct 487 GPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLMNLHFLL 546 Query 528 VGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLP 587 GYLFYW +IG+DP PR +P ++ ++FA +P HAFFG+ LM +GA +YRS+ Sbjct 547 SGYLFYWVVIGVDPTPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYYRSLGFS 606 Query 588 WLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELE 647 W + ++ DQ LGGGIAWS E P+++V++AL+ QWAR DRR A + A D EL Sbjct 607 WHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQWARSDRRTA-KRLDRAADRDDDAELA 665 Query 648 AYNAMLRELS 657 AYNAML +L+ Sbjct 666 AYNAMLAQLA 675 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/220 (26%), Positives = 97/220 (45%), Gaps = 13/220 (5%) Query 6 ATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVA 65 A ++T AVP R+ ++ + +L C A G +S A G P PG ++ Sbjct 7 AGTASTEAVPQHRTLVWPVLA-GVAVLAGC-TAAGIGALSLASALTATGLPDPGPVTTLG 64 Query 66 EPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMV 125 P A +A L +G+ + P+P G++DA +R L SG+W AA +V Sbjct 65 LPFLRAAGEIAAVLAVGSFLFAAFLVPPQPSGVLDADGYRALRLGTVASGVWAVCAALLV 124 Query 126 VIQAAHDTG-----VGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 + + +G + PA++ + L + +A W A+ +A+ L RW Sbjct 125 PLTLSDVSGHPVADLRPAQMWSLAGLITTASAWR----WTAILAAAITLASLPVL--RWS 178 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAV 220 VLL ++ ++ +TG+ G HD AT+ ++ V Sbjct 179 WAPVLLAASLTTLIPLGLTGHSSAGGSHDLATNGLLIHLV 218 >gi|68535604|ref|YP_250309.1| hypothetical protein jk0532 [Corynebacterium jeikeium K411] gi|68263203|emb|CAI36691.1| putative membrane protein [Corynebacterium jeikeium K411] Length=772 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 232/696 (34%), Positives = 343/696 (50%), Gaps = 54/696 (7%) Query 6 ATKSATSAVPTPRSNSMAMVRLAIGLLG-------VCAVVA-AFGLVSGARRYAEA---- 53 A ++ T A PT + A LG + A+VA FG V G E+ Sbjct 17 AAQAETKAKPTQTKQAEAQAPTQPAKLGNPGLVYLIGALVAGCFGAVIGYSFLGESLALL 76 Query 54 GNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERV 113 G P PG ++ P AA G L LG + P+ G + FR A R Sbjct 77 GIPDPGPLTTIGLPFVRGAAIFIGCLGLGGFLMSAFGTPPDKQGYLTLDGFR----AAR- 131 Query 114 SGLW--LGLA--ATMVVIQAAHDTGVGPARLLAS----GALSDSVAASEMARGWIVAAIC 165 +G W +G A + +++ D P + + G D V+AS + W+ AI Sbjct 132 TGTWGMIGFAVLSILLIPMYMSDISGSPLKEVLKPEYWGIALDQVSAS---KAWLWVAIF 188 Query 166 ALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATL 225 A V L +W+ + L +VL+++ A+ G+ G +HDY ++ + + + Sbjct 189 AGVAGGLSLLTRKWIWQPIFLALSVLSLIPLALEGHSAAGGNHDYGVNSLLWHIICVSLW 248 Query 226 TG--LKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGW---AVDSDFAR--- 277 G L + A P A+LV + + AL A+ + FI +D F Sbjct 249 VGGLLALLAHAKRRGPHLALLVQRYSTLAL-FCIIAVAISGFINALLRVHLDELFTTQYG 307 Query 278 LGLLAGVILTSVWLFDCWRLLVR---PPHAGRRRGGGSGAA------------LAMMAAM 322 L ++A +++T + + W R AG G + +A + +MAA Sbjct 308 LVIVAKMVMTLLLAWFGWEQRSRIIPKLRAGEGESGKTTSAQRKPFIRFAALEIFIMAAT 367 Query 323 ASIA-AMAVMTAPRFLTHAFTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIG 381 IA ++ + P T DV LGY L +PP+I R T++R D + G ++L G Sbjct 368 IGIAVSLGRIPPPIEQIVDLTQQDVLLGYTLTEPPSIGRYFTMFRLDLIFGVGAILLQAG 427 Query 382 YAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFI 441 Y + ++R+RG WP+ RLI W G L+F + SG+ Y AMF HM +H+ L+M + Sbjct 428 YMWAWLSIRKRGIEWPIQRLIWWTAGNVTLLFATSSGLGMYSMAMFGPHMLQHVILSMAV 487 Query 442 PVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYI 501 PV VLGGP+TL LR LP G PG REWL +++ + FL+HPI A FV Y Sbjct 488 PVFWVLGGPMTLLLRALPAAGRNGVPGPREWLVVFINNPFSRFLTHPIVAGTQFVVGFYY 547 Query 502 VYFTPLFDTFVRYHWGHEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPF 561 +Y +PLFD H GH FM +HF++ GY+FYW IIG+D PR L ++ LFA++ F Sbjct 548 LYLSPLFDAIAGEHAGHLFMMLHFIISGYIFYWVIIGVDAAPRNLSPFIKMLTLFAMVTF 607 Query 562 HAFFGIALMTMSSTVGATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQ 621 HA+FGIA+M +S + A FY ++ P+ + Q+LGG I W+L E+P+++V +A Q Sbjct 608 HAWFGIAMMQISEPLNAEFYNQLDFPFPVDLDHQQYLGGSITWALGEIPLLVVSIAHGFQ 667 Query 622 WARQDRRVASREDRHADSDYADDELEAYNAMLRELS 657 W R DRR A R DR + D+ELEAYNAML LS Sbjct 668 WLRSDRREAKRFDRREERT-GDEELEAYNAMLAGLS 702 >gi|41408395|ref|NP_961231.1| hypothetical protein MAP2297c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396751|gb|AAS04614.1| hypothetical protein MAP_2297c [Mycobacterium avium subsp. paratuberculosis K-10] Length=689 Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 159/310 (52%), Positives = 205/310 (67%), Gaps = 1/310 (0%) Query 348 LGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTG 407 +GY+ PPT+ R+L WRFD + G A +VLA Y AG LRRRG+ WP GR +WL G Sbjct 367 IGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGLYVAGVVRLRRRGDRWPPGRTSSWLLG 426 Query 408 CAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPP 467 C L+F + SGV Y AMFS+HM HM L+M +P+LL LG PVTLALR LP G G PP Sbjct 427 CLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAAGRGDPP 486 Query 468 GAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLV 527 G REWL LHSR + L++P+ A VLFVA Y +Y + LFDT H GH M +HFL+ Sbjct 487 GPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLMNLHFLL 546 Query 528 VGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLP 587 GYLFYW +IG+DP PR +P ++ ++FA +P HAFFG+ LM +GA +YRS+ Sbjct 547 SGYLFYWVVIGVDPTPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYYRSLGFS 606 Query 588 WLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELE 647 W + ++ DQ LGGGIAWS E P+++V++AL+ QWAR DRR A + A D EL Sbjct 607 WHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQWARSDRRTA-KRLDRAADRDDDAELA 665 Query 648 AYNAMLRELS 657 AYNAML +L+ Sbjct 666 AYNAMLAQLA 675 Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 58/220 (27%), Positives = 96/220 (44%), Gaps = 13/220 (5%) Query 6 ATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVSGARRYAEAGNPYPGAFVSVA 65 A ++T AVP R+ ++ + +L C A G +S A G P PG +V Sbjct 7 AGTASTEAVPQHRTLVWPVLA-GVAVLAGC-TAAGIGTLSLASALTATGLPDPGPVTTVG 64 Query 66 EPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMV 125 P A +A L +G+ + P+P G++DA +R L SG+W AA +V Sbjct 65 LPFLRAAGEIAAVLAVGSFLFAAFLVPPQPSGVLDADGYRALRLGTVASGVWAVCAALLV 124 Query 126 VIQAAHDTG-----VGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWL 180 + + +G + PA++ + L + +A W AI A + A RW Sbjct 125 PLTLSDVSGHPVADLRPAQMWSLAGLITTASA------WRWTAILAAAITLASLPVLRWS 178 Query 181 GHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAV 220 VLL ++ ++ +TG+ G HD AT+ ++ V Sbjct 179 WAPVLLAASLTTLIPLGLTGHSSAGGSHDLATNGLLIHLV 218 >gi|336458266|gb|EGO37246.1| glycerol-3-phosphate O-acyltransferase [Mycobacterium avium subsp. paratuberculosis S397] Length=1087 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 148/284 (53%), Positives = 191/284 (68%), Gaps = 0/284 (0%) Query 348 LGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTG 407 +GY+ PPT+ R+L WRFD + G A +VLA Y AG LRRRG+ WP GR +WL G Sbjct 765 IGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGLYVAGVVRLRRRGDRWPPGRTSSWLLG 824 Query 408 CAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPP 467 C L+F + SGV Y AMFS+HM HM L+M +P+LL LG PVTLALR LP G G PP Sbjct 825 CLVLLFVTSSGVGRYMLAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAAGRGDPP 884 Query 468 GAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLV 527 G REWL LHSR + L++P+ A VLFVA Y +Y + LFDT H GH M +HFL+ Sbjct 885 GPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLMNLHFLL 944 Query 528 VGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLP 587 GYLFYW +IG+DP PR +P ++ ++FA +P HAFFG+ LM +GA +YRS+ Sbjct 945 SGYLFYWVVIGVDPTPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYYRSLGFS 1004 Query 588 WLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVAS 631 W + ++ DQ LGGGIAWS E P+++V++AL+ QWAR DRR A Sbjct 1005 WHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQWARSDRRTAK 1048 >gi|169628647|ref|YP_001702296.1| copper resistance D [Mycobacterium abscessus ATCC 19977] gi|169240614|emb|CAM61642.1| Copper resistance D precursor [Mycobacterium abscessus] Length=669 Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 154/314 (50%), Positives = 207/314 (66%), Gaps = 1/314 (0%) Query 345 DVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAW 404 +V +GY L PPT R++ WRFD + G A +V AI Y G L++RG+ WP+GR I+W Sbjct 350 EVAIGYNLDGPPTPGRLMFDWRFDLIFGTAAIVFAIAYVVGVRRLKQRGDEWPIGRTISW 409 Query 405 LTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDG 464 L GC L+ + SGV Y AMFS+HM HM L+M +PVLLVLGGPVTL LRVLP G Sbjct 410 LFGCGFLLIATSSGVGRYMPAMFSMHMVAHMMLSMLVPVLLVLGGPVTLLLRVLPAAGKS 469 Query 465 RPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIH 524 PPG REW+ LHS+ + FL+HP+ A LF+ Y +Y + L+D V H H M +H Sbjct 470 DPPGLREWVQLALHSKFSRFLTHPLVATSLFIGGFYGLYLSGLYDAAVDVHAAHLAMNLH 529 Query 525 FLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSV 584 FL+ GYLFYW +IGIDP PRRLP ++G++ +P HAFFG+ LM S +G FY ++ Sbjct 530 FLLSGYLFYWVVIGIDPSPRRLPPVAKLGIVLVSLPLHAFFGVILMGTKSILGEKFYSNL 589 Query 585 NLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADD 644 LPW + ADQH+GG I W+ ELP+++V++ALV QW+R D R+A R+ A D Sbjct 590 ALPWRIDLAADQHMGGAITWATGELPLMVVMIALVVQWSRSDERLARRQ-DRAADRDDDA 648 Query 645 ELEAYNAMLRELSR 658 +L AYNAML ++++ Sbjct 649 DLAAYNAMLAKMAQ 662 Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust. Identities = 56/217 (26%), Positives = 91/217 (42%), Gaps = 2/217 (0%) Query 12 SAVPTPRSNSMAMVRLAIGLLGVCAVVAA-FGLVSGARRYAEAGNPYPGAFVSVAEPVGF 70 + PT R + + +GL + +VAA G +S A G P PG S P Sbjct 2 TTAPTARKTDSPIWTIVVGLAVLAGLVAATIGALSLAEALLATGLPNPGPVTSYGLPFVR 61 Query 71 FAASLAGALCLGALIHVVMTAKPEPDGLIDAAAFRIHLLAERVSGLWLGLAATMVVIQAA 130 AA +A + +GA + P+ G++D +R L + + L+A MV + + Sbjct 62 AAAEIAAVVAVGAFLLAAFFVPPQTSGVLDVDGYRALRLGTAAATVLAVLSAVMVPLSVS 121 Query 131 HDTGVGPARLLASGALSDSVAASEMARGWIVAAICALVVATALRLYTRWLGHVVLLVPTV 190 +G P G L + E W A A VA R+ RW +L++ +V Sbjct 122 DVSG-QPLSDFGPGELWTLASEIETVNAWRWMAFIAAGVAITSRVVLRWSWTPLLVLGSV 180 Query 191 LAVVATAVTGNPGQGPDHDYATSAAIVFAVAFATLTG 227 ++ A+ G+ G HD T++ I+ V+ A G Sbjct 181 ATLMPLALVGHSATGGAHDLGTNSLIIHLVSAALWAG 217 >gi|118465739|ref|YP_880921.1| ABC transporter permease [Mycobacterium avium 104] gi|118167026|gb|ABK67923.1| ABC-type transporter, permease components [Mycobacterium avium 104] Length=689 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 157/310 (51%), Positives = 203/310 (66%), Gaps = 1/310 (0%) Query 348 LGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTG 407 +GY+ PPT+ R+L WRFD + G A +VLA Y AG LRRRG+ W G +WL G Sbjct 367 IGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGLYVAGVVRLRRRGDRWQPGCTSSWLLG 426 Query 408 CAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPP 467 C L+F + SGV Y AMFS+HM HM L+M +P+LL LG PVTLALR LP G G PP Sbjct 427 CLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAAGRGDPP 486 Query 468 GAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWGHEFMAIHFLV 527 G REWL LHSR + L++P+ A VLFVA Y +Y + LFDT H GH M +HFL+ Sbjct 487 GPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLMNLHFLL 546 Query 528 VGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTVGATFYRSVNLP 587 GYLFYW +IG+DP PR +P ++ ++FA +P HAFFG+ LM +GA +YRS+ Sbjct 547 SGYLFYWVVIGVDPTPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYYRSLGFS 606 Query 588 WLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDRHADSDYADDELE 647 W + ++ DQ LGGGIAWS E P+++V++AL+ QWAR DRR A + A D EL Sbjct 607 WHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQWARSDRRTA-KRLDRAADRDDDAELA 665 Query 648 AYNAMLRELS 657 AYNAML +L+ Sbjct 666 AYNAMLAQLA 675 Lambda K H 0.327 0.138 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1543119714400 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40