BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0104
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607246|ref|NP_214618.1| hypothetical protein Rv0104 [Mycoba... 1007 0.0
gi|289445634|ref|ZP_06435378.1| conserved hypothetical protein [... 1005 0.0
gi|31791282|ref|NP_853775.1| hypothetical protein Mb0107 [Mycoba... 1002 0.0
gi|308231463|ref|ZP_07412523.2| hypothetical protein TMAG_01236 ... 988 0.0
gi|289441473|ref|ZP_06431217.1| conserved hypothetical protein [... 949 0.0
gi|289567996|ref|ZP_06448223.1| conserved hypothetical protein [... 930 0.0
gi|289747871|ref|ZP_06507249.1| conserved hypothetical protein [... 755 0.0
gi|289760203|ref|ZP_06519581.1| cyclic nucleotide-binding protei... 736 0.0
gi|183980316|ref|YP_001848607.1| hypothetical protein MMAR_0285 ... 694 0.0
gi|289760204|ref|ZP_06519582.1| cyclic nucleotide-binding protei... 238 2e-60
gi|338731886|ref|YP_004663005.1| hypothetical protein SNE_B25100... 198 2e-48
gi|153207215|ref|ZP_01945979.1| hypothetical protein A35_A0301 [... 80.5 7e-13
gi|153791441|ref|NP_001093295.1| cAMP-dependent protein kinase R... 68.6 3e-09
gi|301118707|ref|XP_002907081.1| cGMP-dependent protein kinase, ... 68.2 3e-09
gi|343766440|emb|CCD22431.1| hypothetical protein NDAI_0A02730 [... 67.8 5e-09
gi|294951665|ref|XP_002787094.1| cAMP-dependent protein kinase r... 65.1 3e-08
gi|342300130|emb|CCC67887.1| hypothetical protein NCAS_0A13290 [... 65.1 3e-08
gi|86742769|ref|YP_483169.1| adenosylhomocysteinase [Frankia sp.... 64.7 4e-08
gi|299117507|emb|CBN75351.1| conserved unknown protein [Ectocarp... 64.3 4e-08
gi|294946292|ref|XP_002785012.1| cGMP-dependent protein kinase, ... 64.3 4e-08
gi|124809222|ref|XP_001348520.1| cGMP-dependent protein kinase [... 64.3 5e-08
gi|83649012|ref|YP_437447.1| S-adenosylhomocysteine hydrolase [H... 63.9 7e-08
gi|322798296|gb|EFZ20042.1| hypothetical protein SINV_10859 [Sol... 63.2 1e-07
gi|325980246|gb|ADZ48382.1| cAMP-dependent protein kinase regula... 63.2 1e-07
gi|172038298|ref|YP_001804799.1| hypothetical protein cce_3385 [... 63.2 1e-07
gi|345482208|ref|XP_003424546.1| PREDICTED: LOW QUALITY PROTEIN:... 62.8 1e-07
gi|161669170|gb|ABX75437.1| camp dependent protein kinase type i... 62.8 1e-07
gi|307180059|gb|EFN68135.1| cAMP-dependent protein kinase type I... 62.8 1e-07
gi|48106841|ref|XP_396167.1| PREDICTED: cAMP-dependent protein k... 62.8 1e-07
gi|340717935|ref|XP_003397429.1| PREDICTED: cAMP-dependent prote... 62.8 1e-07
gi|307153822|ref|YP_003889206.1| mechanosensitive ion channel pr... 62.8 1e-07
gi|332021487|gb|EGI61852.1| cAMP-dependent protein kinase type I... 62.8 2e-07
gi|51090200|emb|CAE30452.2| cAMP-dependent protein kinase regula... 62.4 2e-07
gi|242008171|ref|XP_002424885.1| cAMP-dependent protein kinase t... 62.4 2e-07
gi|156407904|ref|XP_001641597.1| predicted protein [Nematostella... 62.0 2e-07
gi|183980364|ref|YP_001848655.1| hypothetical protein MMAR_0333 ... 62.0 2e-07
gi|221060000|ref|XP_002260645.1| cGMP-dependent protein kinase [... 62.0 2e-07
gi|218247518|ref|YP_002372889.1| cyclic nucleotide-binding prote... 62.0 2e-07
gi|47217998|emb|CAG11403.1| unnamed protein product [Tetraodon n... 62.0 3e-07
gi|50555167|ref|XP_504992.1| YALI0F04422p [Yarrowia lipolytica] ... 61.6 3e-07
gi|289740607|gb|ADD19051.1| CAMP-dependent protein kinase [Gloss... 61.6 3e-07
gi|328716740|ref|XP_001950358.2| PREDICTED: cAMP-dependent prote... 61.2 4e-07
gi|68076807|ref|XP_680323.1| cGMP-dependent protein kinase 1, be... 61.2 4e-07
gi|317419207|emb|CBN81244.1| cAMP-dependent protein kinase type ... 61.2 4e-07
gi|321473700|gb|EFX84667.1| hypothetical protein DAPPUDRAFT_9234... 61.2 4e-07
gi|345492835|ref|XP_003426938.1| PREDICTED: cAMP-dependent prote... 60.8 5e-07
gi|156554114|ref|XP_001601087.1| PREDICTED: cAMP-dependent prote... 60.8 5e-07
gi|323456339|gb|EGB12206.1| hypothetical protein AURANDRAFT_2021... 60.8 5e-07
gi|165918681|ref|ZP_02218767.1| putative S-adenosyl-L-homocystei... 60.8 5e-07
gi|58000450|ref|NP_001009989.1| protein kinase, cAMP-dependent, ... 60.5 6e-07
>gi|15607246|ref|NP_214618.1| hypothetical protein Rv0104 [Mycobacterium tuberculosis H37Rv]
gi|15839484|ref|NP_334521.1| hypothetical protein MT0113 [Mycobacterium tuberculosis CDC1551]
gi|148659867|ref|YP_001281390.1| hypothetical protein MRA_0109 [Mycobacterium tuberculosis H37Ra]
25 more sequence titles
Length=504
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/504 (99%), Positives = 504/504 (100%), Gaps = 0/504 (0%)
Query 1 VTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
+TPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY
Sbjct 1 MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
Query 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL
Sbjct 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
Query 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA
Sbjct 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
Query 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN
Sbjct 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
Query 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL
Sbjct 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
Query 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL
Sbjct 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
Query 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG 420
GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG
Sbjct 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG 420
Query 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA
Sbjct 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
Query 481 MREIAYGVARTRLMHAGASESLMV 504
MREIAYGVARTRLMHAGASESLMV
Sbjct 481 MREIAYGVARTRLMHAGASESLMV 504
>gi|289445634|ref|ZP_06435378.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289572684|ref|ZP_06452911.1| cyclic nucleotide-binding protein [Mycobacterium tuberculosis
K85]
gi|298527495|ref|ZP_07014904.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
7 more sequence titles
Length=504
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/504 (99%), Positives = 504/504 (100%), Gaps = 0/504 (0%)
Query 1 VTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
+TPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY
Sbjct 1 MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
Query 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL
Sbjct 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
Query 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA
Sbjct 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
Query 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN
Sbjct 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
Query 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL
Sbjct 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
Query 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL
Sbjct 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
Query 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG 420
GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSG+TLFRQGERADHFFVIESG
Sbjct 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGHTLFRQGERADHFFVIESG 420
Query 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA
Sbjct 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
Query 481 MREIAYGVARTRLMHAGASESLMV 504
MREIAYGVARTRLMHAGASESLMV
Sbjct 481 MREIAYGVARTRLMHAGASESLMV 504
>gi|31791282|ref|NP_853775.1| hypothetical protein Mb0107 [Mycobacterium bovis AF2122/97]
gi|121636017|ref|YP_976240.1| hypothetical protein BCG_0137 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988490|ref|YP_002643177.1| hypothetical protein JTY_0108 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31616867|emb|CAD92969.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491664|emb|CAL70122.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224771603|dbj|BAH24409.1| hypothetical protein JTY_0108 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341600033|emb|CCC62701.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=504
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/504 (99%), Positives = 503/504 (99%), Gaps = 0/504 (0%)
Query 1 VTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
+TPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY
Sbjct 1 MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
Query 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVE FFAESWARLTAGRTARVVLL
Sbjct 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVEWFFAESWARLTAGRTARVVLL 120
Query 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA
Sbjct 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
Query 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN
Sbjct 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
Query 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL
Sbjct 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
Query 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL
Sbjct 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
Query 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG 420
GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSG+TLFRQGERADHFFVIESG
Sbjct 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGHTLFRQGERADHFFVIESG 420
Query 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA
Sbjct 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
Query 481 MREIAYGVARTRLMHAGASESLMV 504
MREIAYGVARTRLMHAGASESLMV
Sbjct 481 MREIAYGVARTRLMHAGASESLMV 504
>gi|308231463|ref|ZP_07412523.2| hypothetical protein TMAG_01236 [Mycobacterium tuberculosis SUMu001]
gi|308369303|ref|ZP_07417268.2| hypothetical protein TMBG_02571 [Mycobacterium tuberculosis SUMu002]
gi|308370314|ref|ZP_07421042.2| hypothetical protein TMCG_02312 [Mycobacterium tuberculosis SUMu003]
20 more sequence titles
Length=495
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/495 (99%), Positives = 495/495 (100%), Gaps = 0/495 (0%)
Query 10 VDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA 69
+DAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA
Sbjct 1 MDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA 60
Query 70 MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV 129
MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV
Sbjct 61 MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV 120
Query 130 AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE 189
AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE
Sbjct 121 AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE 180
Query 190 RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII 249
RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII
Sbjct 181 RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII 240
Query 250 GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA 309
GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA
Sbjct 241 GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA 300
Query 310 TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV 369
TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV
Sbjct 301 TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV 360
Query 370 ASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGK 429
ASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGK
Sbjct 361 ASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGK 420
Query 430 VILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVA 489
VILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVA
Sbjct 421 VILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVA 480
Query 490 RTRLMHAGASESLMV 504
RTRLMHAGASESLMV
Sbjct 481 RTRLMHAGASESLMV 495
>gi|289441473|ref|ZP_06431217.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289748574|ref|ZP_06507952.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289756166|ref|ZP_06515544.1| cyclic nucleotide-binding protein [Mycobacterium tuberculosis
EAS054]
gi|289414392|gb|EFD11632.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289689161|gb|EFD56590.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289696753|gb|EFD64182.1| cyclic nucleotide-binding protein [Mycobacterium tuberculosis
EAS054]
Length=501
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/477 (99%), Positives = 476/477 (99%), Gaps = 0/477 (0%)
Query 1 VTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
+TPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY
Sbjct 1 MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
Query 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL
Sbjct 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
Query 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA
Sbjct 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
Query 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN
Sbjct 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
Query 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL
Sbjct 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
Query 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL
Sbjct 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
Query 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG 420
GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSG+TLFRQGERADHFFVIESG
Sbjct 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGHTLFRQGERADHFFVIESG 420
Query 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHG 477
ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL G
Sbjct 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALMG 477
>gi|289567996|ref|ZP_06448223.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289541749|gb|EFD45398.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=492
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/468 (99%), Positives = 467/468 (99%), Gaps = 0/468 (0%)
Query 10 VDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA 69
+DAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA
Sbjct 1 MDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA 60
Query 70 MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV 129
MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV
Sbjct 61 MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV 120
Query 130 AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE 189
AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE
Sbjct 121 AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE 180
Query 190 RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII 249
RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII
Sbjct 181 RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII 240
Query 250 GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA 309
GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA
Sbjct 241 GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA 300
Query 310 TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV 369
TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV
Sbjct 301 TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV 360
Query 370 ASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGK 429
ASFLNIDVPLQALSRLPLLSIDGYRRLQVRSG+TLFRQGERADHFFVIESGELEALVDGK
Sbjct 361 ASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGHTLFRQGERADHFFVIESGELEALVDGK 420
Query 430 VILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHG 477
VILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL G
Sbjct 421 VILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALMG 468
>gi|289747871|ref|ZP_06507249.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289688399|gb|EFD55887.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=379
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/379 (99%), Positives = 379/379 (100%), Gaps = 0/379 (0%)
Query 1 VTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
+TPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY
Sbjct 1 MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
Query 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL
Sbjct 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
Query 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA
Sbjct 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
Query 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN
Sbjct 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
Query 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL
Sbjct 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
Query 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL
Sbjct 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
Query 361 GLIDQGDIVASFLNIDVPL 379
GLIDQGDIVASFLNIDVPL
Sbjct 361 GLIDQGDIVASFLNIDVPL 379
>gi|289760203|ref|ZP_06519581.1| cyclic nucleotide-binding protein [Mycobacterium tuberculosis
T85]
gi|289715767|gb|EFD79779.1| cyclic nucleotide-binding protein [Mycobacterium tuberculosis
T85]
gi|339293171|gb|AEJ45282.1| hypothetical protein CCDC5079_0092 [Mycobacterium tuberculosis
CCDC5079]
gi|339296819|gb|AEJ48929.1| hypothetical protein CCDC5180_0092 [Mycobacterium tuberculosis
CCDC5180]
Length=370
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/370 (99%), Positives = 370/370 (100%), Gaps = 0/370 (0%)
Query 10 VDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA 69
+DAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA
Sbjct 1 MDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA 60
Query 70 MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV 129
MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV
Sbjct 61 MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAV 120
Query 130 AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE 189
AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE
Sbjct 121 AGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFE 180
Query 190 RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII 249
RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII
Sbjct 181 RTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVII 240
Query 250 GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA 309
GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA
Sbjct 241 GATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDA 300
Query 310 TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV 369
TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV
Sbjct 301 TLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIV 360
Query 370 ASFLNIDVPL 379
ASFLNIDVPL
Sbjct 361 ASFLNIDVPL 370
>gi|183980316|ref|YP_001848607.1| hypothetical protein MMAR_0285 [Mycobacterium marinum M]
gi|183173642|gb|ACC38752.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=505
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/493 (75%), Positives = 416/493 (85%), Gaps = 0/493 (0%)
Query 1 VTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY 60
+T VTTFPLVDAI++ R +LDGV++IAAQHLL+TTHAMLRSLFRVGLDPRNVAVIGKCY
Sbjct 1 MTQVTTFPLVDAIVSRRGGSLDGVVVIAAQHLLETTHAMLRSLFRVGLDPRNVAVIGKCY 60
Query 61 STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL 120
STH GV DAMRADG++VD+ S AYAPHESFDT+YTRHVERFFA+SW RL AGR RVVLL
Sbjct 61 STHLGVADAMRADGVHVDEFSAAYAPHESFDTEYTRHVERFFAQSWDRLAAGRAGRVVLL 120
Query 121 DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA 180
DDGGSLLA AGA LD +A+++GIEQTSAGYAKI CALGFPV+NIARSSAKLLYESPIIA
Sbjct 121 DDGGSLLAAAGAALDGTANIVGIEQTSAGYAKIANCALGFPVVNIARSSAKLLYESPIIA 180
Query 181 ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN 240
VT+ AF+R G+D AILITGAGAIG+ALAD LRP H+RVDVYDTR G PIDL
Sbjct 181 GNVTRCAFDRIEGLDRGDAILITGAGAIGSALADQLRPRHERVDVYDTRVGHPGPIDLTQ 240
Query 241 AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL 300
AIG YDVIIGATGATSVP +H+LLRPGV+LMSASSSDREF ALRRR P+P+CHADL
Sbjct 241 AIGDYDVIIGATGATSVPTELHDLLRPGVVLMSASSSDREFSGAALRRRAIPDPNCHADL 300
Query 301 RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL 360
R+ADG +DATLLNSGFPVNFDGS MCGD SM+LTMALLAAAVLYA+ A A ++ DHPHL
Sbjct 301 RIADGKLDATLLNSGFPVNFDGSAMCGDESMSLTMALLAAAVLYAASAEAADIDCDHPHL 360
Query 361 GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG 420
GL DQGDIV SFLNIDVPLQAL RLPLLS+ GYRR+++RSG +FRQGE A HF+V+ESG
Sbjct 361 GLTDQGDIVQSFLNIDVPLQALGRLPLLSVGGYRRIELRSGDIVFRQGEPASHFYVVESG 420
Query 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
ELEA VDG+++LRL AGDHFGE LL G RR ATVRA +PSVLW LD AF + L DA
Sbjct 421 ELEAFVDGQLVLRLVAGDHFGEIALLSGWRRAATVRASQPSVLWSLDAAAFSEVLRVDAT 480
Query 481 MREIAYGVARTRL 493
MRE+A+ +R+
Sbjct 481 MRELAHQAIHSRV 493
>gi|289760204|ref|ZP_06519582.1| cyclic nucleotide-binding protein [Mycobacterium tuberculosis
T85]
gi|289715768|gb|EFD79780.1| cyclic nucleotide-binding protein [Mycobacterium tuberculosis
T85]
Length=118
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/118 (99%), Positives = 118/118 (100%), Gaps = 0/118 (0%)
Query 387 LLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLL 446
+LSIDGYRRLQVRSG+TLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLL
Sbjct 1 MLSIDGYRRLQVRSGHTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLL 60
Query 447 GGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV 504
GGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV
Sbjct 61 GGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV 118
>gi|338731886|ref|YP_004663005.1| hypothetical protein SNE_B25100 [Simkania negevensis Z]
gi|336481269|emb|CCB87869.1| uncharacterized protein Rv0104/MT0113 [Simkania negevensis Z]
Length=361
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/312 (37%), Positives = 171/312 (55%), Gaps = 10/312 (3%)
Query 39 MLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHV 98
M F+ GL P+N+ VIGKCYS P V + + DG+ V S + + ++D ++ +H+
Sbjct 1 MFTKAFQKGLKPQNLFVIGKCYSIDPIVYNQLNEDGVKVSPQSAYFNSYTAYDEEFDKHI 60
Query 99 ERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDAS-ADVIGIEQTSAGYAKIVGCA 157
FF +L +V++LDDGG L+ +A +L + +++GIEQTSAG+ ++
Sbjct 61 NEFFTSIIKKLDLKNFDKVIILDDGGFLIRIANEILPHTLENIVGIEQTSAGFNRLSKLN 120
Query 158 LGFPVINIARSSAKLLYESPIIAARVTQTAFERTAGID-SSAAILITGAGAIGTALADVL 216
L FPVIN ARS K+ YESPII + E+ + ILI G G +G + L
Sbjct 121 LFFPVINTARSWVKMKYESPIIINLALRKLHEKIEHLTPRPKNILIMGYGTLGQIIFSFL 180
Query 217 RPLHDRVDVYDTR-SGCMTPIDLPNA-IGGYDVIIGATGATSVPASMHELLRPGVLLMSA 274
+ +D + +D S M P N+ + +D+IIG+TG S+ + L+ V+L S
Sbjct 181 KDKYD-ISYFDANPSRSMFPSKQLNSRLSHFDLIIGSTGECSLSNQAFKYLKKPVVLASV 239
Query 275 SSSDREFDAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDA-SMAL 333
SSSDREFD++ LR++ + +CH DL + TLLN GFPVNFD D + L
Sbjct 240 SSSDREFDSLFLRKKISQTSNCHTDLCIQ----GITLLNCGFPVNFDDDYSAIDTDNFQL 295
Query 334 TMALLAAAVLYA 345
T +L+ A+ A
Sbjct 296 TRSLIFGAICQA 307
>gi|153207215|ref|ZP_01945979.1| hypothetical protein A35_A0301 [Coxiella burnetii 'MSU Goat Q177']
gi|212218205|ref|YP_002304992.1| D-2-hydroxyacid dehydrogenase [Coxiella burnetii CbuK_Q154]
gi|120576703|gb|EAX33327.1| hypothetical protein A35_A0301 [Coxiella burnetii 'MSU Goat Q177']
gi|212012467|gb|ACJ19847.1| D-2-hydroxyacid dehydrogenase [Coxiella burnetii CbuK_Q154]
Length=340
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/251 (30%), Positives = 117/251 (47%), Gaps = 24/251 (9%)
Query 116 RVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALG-FPVINIARSSAKLLY 174
+++LD GG L+ + VIG+E+T+AG + L FP++ +A +AK +
Sbjct 11 EILILDHGGYALSFIPEQILRKYKVIGVEKTTAGLINLDAQGLPPFPLLGVANCAAKKIL 70
Query 175 ESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDT-----R 229
ESP+IA + + +++ + G G+IG A+ D L + +V VYD R
Sbjct 71 ESPLIAEAIVKKLLPLIPIKENNLTCGVIGYGSIGKAITDKLLSMDHKVIVYDNDLNQLR 130
Query 230 S-----GCMTPIDLPNAIGGYDVIIGATG---ATSVPASMHELLRPGVLLMSASSSDREF 281
S T +LP + D I G TG ATS+ + L L+S SS D+EF
Sbjct 131 SVNKMKNLATTNELPALVASSDYIFGCTGRDVATSIDS--FRLSPKNKTLISCSSEDKEF 188
Query 282 DAVALRRRTTPN------PDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDAS-MALT 334
++ + N P + + G+ +L GFP+NFD S A+ + LT
Sbjct 189 LSLLQLVQQKNNGKVAAKPLADVEYKTDMGAT-IRILRGGFPINFDDSGESVPANDIQLT 247
Query 335 MALLAAAVLYA 345
AL+ +VL A
Sbjct 248 RALVLGSVLQA 258
>gi|153791441|ref|NP_001093295.1| cAMP-dependent protein kinase R1 [Bombyx mori]
gi|146220618|gb|ABQ11379.1| cAMP-dependent protein kinase R1 [Bombyx mori]
Length=370
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/91 (40%), Positives = 52/91 (58%), Gaps = 0/91 (0%)
Query 396 LQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATV 455
+Q G T+ RQG+ D+F++I+SGE+E LV+G+ + +G G FGE L+ G R ATV
Sbjct 145 VQCLPGETVIRQGDEGDNFYIIDSGEVEVLVNGEPVTTIGEGGSFGELALIYGTPRAATV 204
Query 456 RACEPSVLWELDGKAFGDALHGDAAMREIAY 486
RA LW LD ++ L G + Y
Sbjct 205 RARTSLKLWGLDRDSYRRILMGSTIRKRRMY 235
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/112 (34%), Positives = 52/112 (47%), Gaps = 16/112 (14%)
Query 380 QALSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGELEALVD-- 427
+ LSR+ +L S++ + RL V T+ RQGE + F++I G L
Sbjct 237 EFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRG 296
Query 428 --GKVIL--RLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
G+ + RLG D+FGE LL R ATVRA P +LD F L
Sbjct 297 AGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVL 348
>gi|301118707|ref|XP_002907081.1| cGMP-dependent protein kinase, putative [Phytophthora infestans
T30-4]
gi|262105593|gb|EEY63645.1| cGMP-dependent protein kinase, putative [Phytophthora infestans
T30-4]
Length=846
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/78 (43%), Positives = 47/78 (61%), Gaps = 0/78 (0%)
Query 394 RRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIA 453
+R++V + + +QG+ D F+V+ SG LE +V+ V+ L GDHFGE L+ R A
Sbjct 145 KRIKVEAEQNVIKQGDLGDQFYVVHSGSLEVIVNTAVLGYLKPGDHFGELALIYDAPRAA 204
Query 454 TVRACEPSVLWELDGKAF 471
TVRA S+LW LD F
Sbjct 205 TVRAATNSILWTLDRDEF 222
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/68 (33%), Positives = 33/68 (49%), Gaps = 11/68 (16%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILR-----------LGAGDHFGEACLLGGM 449
G + QG+ D FF++E G + ++G + LG GD+FGE LL M
Sbjct 270 GEMIINQGDVGDTFFIVEEGNVSCQMEGPRGFKHSDAMRTELAILGPGDYFGEMALLSDM 329
Query 450 RRIATVRA 457
R A++ A
Sbjct 330 PRNASIYA 337
>gi|343766440|emb|CCD22431.1| hypothetical protein NDAI_0A02730 [Naumovozyma dairenensis CBS
421]
Length=320
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (31%), Positives = 64/137 (47%), Gaps = 1/137 (0%)
Query 351 DEMSSDHPHLGLIDQGDIVASFLNIDVPLQAL-SRLPLLSIDGYRRLQVRSGYTLFRQGE 409
D+ + DH H +Q + S + + L S L I+ + + +QG+
Sbjct 59 DDWTPDHYHEKDPEQLKRLESSIGTNFLFNKLDSDSKRLVINCLEEKHIPKDTIIIKQGD 118
Query 410 RADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGK 469
D+F+V+ESG +E +VDG + GAG FGE L+ R ATV+A LW LD
Sbjct 119 EGDYFYVVESGNVEYIVDGNTVNSSGAGSSFGELALMYNAPRAATVKALTDCHLWALDRL 178
Query 470 AFGDALHGDAAMREIAY 486
F L G + + + Y
Sbjct 179 TFRKILLGSSFKKRVMY 195
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/91 (31%), Positives = 48/91 (53%), Gaps = 11/91 (12%)
Query 380 QALSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGELEALVDGK 429
+ L +P+L S+ Y R ++ +G + ++G+ ++F++IE GE +GK
Sbjct 197 ELLKSMPILQSLTTYDRAKLADALDTHIYEAGEVIIKEGDTGENFYLIEYGECTVTKEGK 256
Query 430 VILR-LGAGDHFGEACLLGGMRRIATVRACE 459
+L L D+FGE LL + R ATV A +
Sbjct 257 GLLTTLKDRDYFGEIALLKNVPRQATVTATK 287
>gi|294951665|ref|XP_002787094.1| cAMP-dependent protein kinase regulatory subunit, putative [Perkinsus
marinus ATCC 50983]
gi|239901684|gb|EER18890.1| cAMP-dependent protein kinase regulatory subunit, putative [Perkinsus
marinus ATCC 50983]
Length=414
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/105 (41%), Positives = 60/105 (58%), Gaps = 15/105 (14%)
Query 382 LSRLPLL-SIDGYRRLQ---------VRSGYTLFRQGERADHFFVIESGELEALV--DG- 428
L +PLL S+D Y R Q V +G + +QGE D F+VIE G+ EAL DG
Sbjct 290 LKSVPLLNSMDAYERSQIADALKPVSVAAGEMIVKQGEPGDTFYVIEDGDCEALKERDGG 349
Query 429 --KVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAF 471
+V++ GAGD+FGE LL G R A+++A + L LD ++F
Sbjct 350 QQEVVMSYGAGDYFGELALLRGEPRAASIKAKTDTKLLALDRRSF 394
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/103 (32%), Positives = 46/103 (45%), Gaps = 6/103 (5%)
Query 390 IDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALV------DGKVILRLGAGDHFGEA 443
+D + V + + QG+ D FV+ESGELE + K++ GD FGE
Sbjct 184 VDAMKEETVSAKERVINQGDDGDFLFVVESGELEVYKKFPGDEEEKMLKVCEVGDVFGEL 243
Query 444 CLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAY 486
LL + R A+V A L LD + F + AA + Y
Sbjct 244 ALLYNVPRAASVEAKTDCTLLRLDRETFNHIVKDAAAHKRERY 286
>gi|342300130|emb|CCC67887.1| hypothetical protein NCAS_0A13290 [Naumovozyma castellii CBS
4309]
Length=374
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (35%), Positives = 50/99 (51%), Gaps = 0/99 (0%)
Query 388 LSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLG 447
L I+ +V+ G T+ +QG+ D+F+V+E G +E VD + + G G FGE L+
Sbjct 153 LVINCLEEKKVKKGDTIIKQGDEGDYFYVVEVGSVEFYVDDQKVSNSGPGSSFGELALMY 212
Query 448 GMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAY 486
R ATV A LW LD F L G + + + Y
Sbjct 213 NSPRAATVLASSDCTLWALDRLTFRKILLGSSFKKRVMY 251
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/72 (35%), Positives = 39/72 (55%), Gaps = 1/72 (1%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILR-LGAGDHFGEACLLGGMRRIATVRACE 459
G + +G+ ++F++IE GE E +GK +L L D+FGE LL + R ATV A +
Sbjct 284 GQVILHEGDPGENFYLIEYGECEVTKEGKGLLTTLHDRDYFGEIALLKDVPRQATVTAVK 343
Query 460 PSVLWELDGKAF 471
+ + L F
Sbjct 344 KTKVATLGRSGF 355
>gi|86742769|ref|YP_483169.1| adenosylhomocysteinase [Frankia sp. CcI3]
gi|86569631|gb|ABD13440.1| adenosylhomocysteinase [Frankia sp. CcI3]
Length=394
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/258 (30%), Positives = 108/258 (42%), Gaps = 32/258 (12%)
Query 111 AGRTARVVLLDDGGSLL-AVAGAMLDASADVIGI-EQTSAGYAKIVGCALG-FPVINIAR 167
AGR +VLLD GG A+ S ++G+ E T GY K + C PV ++AR
Sbjct 117 AGRD--LVLLDIGGYFAPALTSLCRQFSGRIVGVVEDTENGYRKYLSCGKPPCPVFSVAR 174
Query 168 SSAK-----LLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDR 222
S K L+ +S + + T++ I + G G IG ++A+ LR R
Sbjct 175 SPLKQPEDYLVGQSIVFS---TESLLREHGNILHGRETCVIGYGKIGRSVANTLRAKSVR 231
Query 223 VDVYDT---------RSGCMTPIDLPNAIGGYDVIIGATGATSVPASMHELLRPGVLLMS 273
VY+T G A+G DVI+ ATG ++ LRPG + S
Sbjct 232 TTVYETDPVRAVEAMSHGFAVKWSKSEALGRADVIVCATGNRALEGEDFTYLRPGSYVAS 291
Query 274 ASSSDREFDAVALR-----RRTTPNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGD 328
+SSD E + +LR R P+ R+ + LLN G VNF G
Sbjct 292 VTSSDDELNLASLRGTYRVDRLGPHLS-----RMTSWNHHFYLLNDGNAVNFVHGAAVGP 346
Query 329 ASMALTMALLAAAVLYAS 346
+ +LAA L +S
Sbjct 347 FIFLVQGEILAALALLSS 364
>gi|299117507|emb|CBN75351.1| conserved unknown protein [Ectocarpus siliculosus]
Length=444
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 47/85 (56%), Gaps = 0/85 (0%)
Query 396 LQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATV 455
L++ +G + QGER FFV+ESG EA V+G+ + G G FGE L+ R ATV
Sbjct 202 LEMSAGQDIVVQGERGSRFFVMESGSAEAYVNGERVCGYGPGGSFGELALMYNCERAATV 261
Query 456 RACEPSVLWELDGKAFGDALHGDAA 480
RA S LW +D F +L A+
Sbjct 262 RATSDSRLWTMDLSTFRRSLATTAS 286
>gi|294946292|ref|XP_002785012.1| cGMP-dependent protein kinase, putative [Perkinsus marinus ATCC
50983]
gi|239898387|gb|EER16808.1| cGMP-dependent protein kinase, putative [Perkinsus marinus ATCC
50983]
Length=964
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (37%), Positives = 45/79 (57%), Gaps = 0/79 (0%)
Query 398 VRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRA 457
+ G TLF+QG+ D + ++SGE E +D + LG G FGE +L ++R ATV+
Sbjct 146 IEGGQTLFQQGDDGDRCYAVQSGEFEISIDEVNVKTLGKGSTFGELAMLYNVKRTATVKC 205
Query 458 CEPSVLWELDGKAFGDALH 476
+ VLWE+ G+ F +
Sbjct 206 KQTGVLWEIYGRTFKKVMK 224
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 39/68 (58%), Gaps = 1/68 (1%)
Query 407 QGERADHFFVIESGELEALVDGKVILR-LGAGDHFGEACLLGGMRRIATVRACEPSVLWE 465
+G+ +D+F++I G + + GK ++R L ++FGE LL + R AT+ A EP+
Sbjct 556 EGDPSDNFYLIGKGSVSVEIPGKGVVRTLSRWEYFGERGLLFEIPRSATITAAEPTTCLI 615
Query 466 LDGKAFGD 473
L + F D
Sbjct 616 LQKQVFLD 623
>gi|124809222|ref|XP_001348520.1| cGMP-dependent protein kinase [Plasmodium falciparum 3D7]
gi|20502828|gb|AAM22644.1|AF465544_1 cGMP-dependent protein kinase [Plasmodium falciparum]
gi|23497415|gb|AAN36959.1| cGMP-dependent protein kinase [Plasmodium falciparum 3D7]
Length=853
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/124 (30%), Positives = 64/124 (52%), Gaps = 3/124 (2%)
Query 351 DEMSSDHPHL--GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQV-RSGYTLFRQ 407
D + DH L L + D++ + L ++ L+ +L++ Y + V +SG + +Q
Sbjct 29 DSLMEDHLELREKLSEDIDMIKTSLKNNLVCSTLNDNEILTLSNYMQFFVFKSGNLVIKQ 88
Query 408 GERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELD 467
GE+ +FF+I SG+ + V+ K + +G G FGEA L+ +R AT+ A LW +
Sbjct 89 GEKGSYFFIINSGKFDVYVNDKKVKTMGKGSSFGEAALIHNTQRSATIIAETDGTLWGVQ 148
Query 468 GKAF 471
F
Sbjct 149 RSTF 152
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/91 (31%), Positives = 48/91 (53%), Gaps = 1/91 (1%)
Query 388 LSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLG 447
L I+ +R + G + ++GE F++I++GE+E + + K + LG D+FGE LL
Sbjct 429 LLIEAFRTTRYEEGDYIIQEGEVGSRFYIIKNGEVEIVKNKKRLRTLGKNDYFGERALLY 488
Query 448 GMRRIATVRACEPSV-LWELDGKAFGDALHG 477
R A+V + +V W +D F + G
Sbjct 489 DEPRTASVISKVNNVECWFVDKSVFLQIIQG 519
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (34%), Positives = 36/63 (58%), Gaps = 0/63 (0%)
Query 399 RSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRAC 458
+SG T+ +QG+ D ++++ G+ ++ + I L G +FGE LL R AT+ A
Sbjct 198 KSGETIVKQGDYGDVLYILKEGKATVYINDEEIRVLEKGSYFGERALLYDEPRSATIIAK 257
Query 459 EPS 461
EP+
Sbjct 258 EPT 260
>gi|83649012|ref|YP_437447.1| S-adenosylhomocysteine hydrolase [Hahella chejuensis KCTC 2396]
gi|83637055|gb|ABC33022.1| S-adenosylhomocysteine hydrolase [Hahella chejuensis KCTC 2396]
Length=392
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/333 (28%), Positives = 132/333 (40%), Gaps = 43/333 (12%)
Query 15 AGRDRN---LDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMR 71
A +DRN L I +HLL TT M+R L + A++ K YS V+ ++
Sbjct 17 ARQDRNKAYLKNTRFIIIEHLLPTTEEMVRCLMES--EAEIFALLAKPYSIDSEVLMRLQ 74
Query 72 ADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAG 131
DGI V S Y ++ Y +++ E+ + A + VVL+D GG
Sbjct 75 GDGIKVIQKSYQYLE----ESDYLKYL---ILEAIDKSKADKK-NVVLIDVGGYFSRPLK 126
Query 132 AMLDASADVIG--IEQTSAGYAKIVGCA--LGFPVINIARSSAKLLYESPIIAARVTQTA 187
+ D I +E T+ G+ + + PV ++ARS K + R +A
Sbjct 127 EISDKDKKYISGVVEDTTFGHNRYQMSVKHISVPVFSVARSGLKEI--EARFVGRDAVSA 184
Query 188 FE---RTAGID-SSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIG 243
E R GI + L+ G G IG +A LR V VYD +L I
Sbjct 185 IEYILRKKGISLAGRNALVIGYGMIGENVARALRGGDLNVSVYDKHDHK----NLSAFID 240
Query 244 GY------------DVIIGATGATSVPASMHEL--LRPGVLLMSASSSDREFDAVALRRR 289
GY D+I ATG S + E+ + V+L S S D EFD ++
Sbjct 241 GYAIHKKRELIKNADIIFSATGDPSGSMTYEEIEECKNNVILASVGSKDTEFDIKEVKAH 300
Query 290 TTPNPDCHADLR--VADGSVDATLLNSGFPVNF 320
D +L+ V S + G VNF
Sbjct 301 CIEEKDVGEELKGYVLPNSKRVLVAKQGAAVNF 333
>gi|322798296|gb|EFZ20042.1| hypothetical protein SINV_10859 [Solenopsis invicta]
Length=298
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (38%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G + RQG+ D+F+VI+ GE+E V+G++ +G G FGE L+ G R ATVRA
Sbjct 78 GEAIIRQGDEGDNFYVIDQGEVEIFVNGELATTIGEGGSFGELALIYGTPRAATVRAKTD 137
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 138 VKLWGIDRDSYRRILMGSTIRKRKMY 163
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/112 (35%), Positives = 53/112 (48%), Gaps = 16/112 (14%)
Query 380 QALSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGE---LEALV 426
+ LSR+ +L S+D + RL V G T+ RQGE + F++I G L+
Sbjct 165 EFLSRVSILESLDKWERLTVADALEPVAFDDGETIVRQGEPGEDFYIIVEGTAVVLQQRS 224
Query 427 DGKV---ILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
+G + RLG D+FGE LL R ATV A P +LD F L
Sbjct 225 EGDEPAEVGRLGPSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL 276
>gi|325980246|gb|ADZ48382.1| cAMP-dependent protein kinase regulatory subunit [Yarrowia lipolytica]
Length=396
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (38%), Positives = 45/87 (52%), Gaps = 0/87 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
SG + QG+ D+F+++ESG +E + DG + G G FGE L+ R+ATV A +
Sbjct 187 SGEKIITQGDEGDYFYIMESGAVEFIKDGVKVNSSGPGSSFGELALMYNAPRVATVVATQ 246
Query 460 PSVLWELDGKAFGDALHGDAAMREIAY 486
P VLW LD F L R Y
Sbjct 247 PCVLWSLDRVTFRKILLDGTHQRRSMY 273
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (37%), Positives = 45/88 (52%), Gaps = 12/88 (13%)
Query 382 LSRLPLLS-IDGYRRLQ---------VRSGYTLFRQGERADHFFVIESGELEALVDGK-- 429
L +P+LS + Y R + V G + +GE D F+++ESGE E G+
Sbjct 277 LKEVPILSDLGSYERNKLADALTSQVVEPGTAVITEGEAGDAFYLVESGEAEVTKKGESG 336
Query 430 VILRLGAGDHFGEACLLGGMRRIATVRA 457
V+ L GD+FGE LL + R ATV A
Sbjct 337 VVATLKQGDYFGEVALLNDLPRQATVTA 364
>gi|172038298|ref|YP_001804799.1| hypothetical protein cce_3385 [Cyanothece sp. ATCC 51142]
gi|171699752|gb|ACB52733.1| hypothetical protein cce_3385 [Cyanothece sp. ATCC 51142]
Length=425
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/139 (34%), Positives = 68/139 (49%), Gaps = 10/139 (7%)
Query 365 QGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQV----RSGYTLFRQGERADHFFVIESG 420
Q + + S L +Q L +LP + L + + L ++GE D+F++I G
Sbjct 106 QPETIPSILQRLSNVQVLQQLPEGEKEAIANLVIPVHAKPKQVLCQEGEPGDYFYMIAQG 165
Query 421 ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA 480
E E + D K I LG G+ FGE LL R ATV AC P L++L+ + FG L
Sbjct 166 EAEVIKDRKHITVLGPGEIFGEMSLLTKEPRSATVIACTPMELYQLNEENFGQVLTRSP- 224
Query 481 MREIAYGVART---RLMHA 496
+A ++RT RL H+
Sbjct 225 --HLALALSRTLARRLRHS 241
>gi|345482208|ref|XP_003424546.1| PREDICTED: LOW QUALITY PROTEIN: cAMP-dependent protein kinase
type I regulatory subunit-like, partial [Nasonia vitripennis]
Length=360
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (38%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G + RQG+ D+F+VI+ GE+E V+G+ + +G G FGE L+ G R ATVRA
Sbjct 151 GEAIIRQGDEGDNFYVIDQGEVEIFVNGEHVTTIGEGGSFGELALIYGTPRAATVRAKTD 210
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 211 VKLWGIDRDSYRRILMGSTIRKRKMY 236
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/110 (33%), Positives = 51/110 (47%), Gaps = 16/110 (14%)
Query 382 LSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGE---LEALVDG 428
LSR+ +L S++ + RL V G T+ RQGE + F++I G L+ +
Sbjct 240 LSRVSILESLEKWERLTVADALEPVAFEDGETIVRQGEPGEDFYIIVEGTAVVLQQRTES 299
Query 429 KV---ILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
+ + RLG D+FGE LL R ATV P +LD F L
Sbjct 300 EEPAEVGRLGPSDYFGEIALLLDRPRAATVVTRGPLKCIKLDRARFERVL 349
>gi|161669170|gb|ABX75437.1| camp dependent protein kinase type i-beta regulatory subunit
[Lycosa singoriensis]
Length=240
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (33%), Positives = 49/88 (56%), Gaps = 0/88 (0%)
Query 399 RSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRAC 458
++G + QG++ D+F+VI+ GE+E V+G++++ +G FGE L+ G R ATV+A
Sbjct 125 KAGEVIITQGDQGDNFYVIDQGEVEVFVNGQLVVTIGEAGSFGELALIYGTPRAATVKAK 184
Query 459 EPSVLWELDGKAFGDALHGDAAMREIAY 486
LW +D + L G + Y
Sbjct 185 IDCKLWAIDRDTYRRILMGSTIRKRKMY 212
>gi|307180059|gb|EFN68135.1| cAMP-dependent protein kinase type I regulatory subunit [Camponotus
floridanus]
gi|307193131|gb|EFN76048.1| cAMP-dependent protein kinase type I regulatory subunit [Harpegnathos
saltator]
Length=372
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (38%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G + RQG+ D+F+VI+ GE+E V+G++ +G G FGE L+ G R ATVRA
Sbjct 152 GEAIIRQGDEGDNFYVIDQGEVEIFVNGELATTIGEGGSFGELALIYGTPRAATVRAKTD 211
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 212 VKLWGIDRDSYRRILMGSTIRKRKMY 237
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/110 (36%), Positives = 52/110 (48%), Gaps = 16/110 (14%)
Query 382 LSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGE---LEALVDG 428
LSR+ +L S+D + RL V G T+ RQGE + F++I G L+ +G
Sbjct 241 LSRVSILESLDKWERLTVADALEPVAFDDGETIVRQGEPGEDFYIIVEGTAVVLQQRSEG 300
Query 429 KV---ILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
+ RLG D+FGE LL R ATV A P +LD F L
Sbjct 301 DEPAEVGRLGPSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL 350
>gi|48106841|ref|XP_396167.1| PREDICTED: cAMP-dependent protein kinase type I regulatory subunit
isoform 1 [Apis mellifera]
Length=372
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (38%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G + RQG+ D+F+VI+ GE+E V+G++ +G G FGE L+ G R ATVRA
Sbjct 152 GEAIIRQGDEGDNFYVIDQGEVEIFVNGELATTIGEGGSFGELALIYGTPRAATVRAKTD 211
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 212 VKLWGIDRDSYRRILMGSTIRKRKMY 237
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/110 (36%), Positives = 53/110 (49%), Gaps = 16/110 (14%)
Query 382 LSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGE---LEALVDG 428
LSR+ +L S+D + RL V G T+ RQGE + F++I G L+ +G
Sbjct 241 LSRVSILESLDKWERLTVADALEPVAFDDGETIVRQGEPGEDFYIIVEGTAVVLQQRSEG 300
Query 429 KV---ILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
+ + RLG D+FGE LL R ATV A P +LD F L
Sbjct 301 EEPAEVGRLGPSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL 350
>gi|340717935|ref|XP_003397429.1| PREDICTED: cAMP-dependent protein kinase type I regulatory subunit-like
[Bombus terrestris]
Length=372
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (38%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G + RQG+ D+F+VI+ GE+E V+G++ +G G FGE L+ G R ATVRA
Sbjct 152 GEAIIRQGDEGDNFYVIDQGEVEIFVNGELATTIGEGGSFGELALIYGTPRAATVRAKTD 211
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 212 VKLWGIDRDSYRRILMGSTIRKRKMY 237
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/110 (36%), Positives = 53/110 (49%), Gaps = 16/110 (14%)
Query 382 LSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGE---LEALVDG 428
LSR+ +L S+D + RL V G T+ RQGE + F++I G L+ +G
Sbjct 241 LSRVSILESLDKWERLTVADALEPVAFDDGETIVRQGEPGEDFYIIVEGTAVVLQQRSEG 300
Query 429 KVIL---RLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
+ + RLG D+FGE LL R ATV A P +LD F L
Sbjct 301 EELAEVGRLGPSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL 350
>gi|307153822|ref|YP_003889206.1| mechanosensitive ion channel protein MscS [Cyanothece sp. PCC
7822]
gi|306984050|gb|ADN15931.1| MscS Mechanosensitive ion channel [Cyanothece sp. PCC 7822]
Length=489
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (36%), Positives = 56/95 (59%), Gaps = 3/95 (3%)
Query 392 GYRRLQVRSGYTLFRQGERADHFFVIESGELEALVD--GKVILRLGAGDHFGEACLLGGM 449
GYR+ ++ G+ LF +G+ + F++I SG +E V K + L G FGE L+ G+
Sbjct 347 GYRK-KLDQGHILFNEGDPGNAFYIILSGAVEVFVPKINKHLATLQTGCFFGELSLILGI 405
Query 450 RRIATVRACEPSVLWELDGKAFGDALHGDAAMREI 484
R A+V+A EPS+L+ ++ KAF L + + E+
Sbjct 406 PRTASVKAIEPSILFVINQKAFQKILQENTDLAEV 440
>gi|332021487|gb|EGI61852.1| cAMP-dependent protein kinase type I regulatory subunit [Acromyrmex
echinatior]
Length=372
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (38%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G + RQG+ D+F+VI+ GE+E V+G++ +G G FGE L+ G R ATVRA
Sbjct 152 GEAIIRQGDEGDNFYVIDQGEVEIFVNGELATTIGEGGSFGELALIYGTPRAATVRAKTD 211
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 212 VKLWGIDRDSYRRILMGSTIRKRKMY 237
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/110 (36%), Positives = 53/110 (49%), Gaps = 16/110 (14%)
Query 382 LSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVI---ESGELEALVDG 428
LSR+ +L S+D + RL V G T+ RQGE + F++I +G L+ +G
Sbjct 241 LSRVSILESLDKWERLTVADALEPVAFDDGETIVRQGEPGEDFYIIVEGTAGVLQQRSEG 300
Query 429 KV---ILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
+ RLG D+FGE LL R ATV A P +LD F L
Sbjct 301 DEPAEVGRLGPSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL 350
>gi|51090200|emb|CAE30452.2| cAMP-dependent protein kinase regulatory subunit [Yarrowia lipolytica]
Length=397
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (38%), Positives = 44/87 (51%), Gaps = 0/87 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
SG + QG+ D+F+++ESG +E + DG + G G FGE L+ R ATV A +
Sbjct 188 SGEKIITQGDEGDYFYIVESGAVEFIKDGVKVNSSGPGSSFGELALMYNAPRAATVVATQ 247
Query 460 PSVLWELDGKAFGDALHGDAAMREIAY 486
P VLW LD F L R Y
Sbjct 248 PCVLWSLDRVTFRKILLDGTHQRRSMY 274
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (37%), Positives = 45/88 (52%), Gaps = 12/88 (13%)
Query 382 LSRLPLLS-IDGYRRLQ---------VRSGYTLFRQGERADHFFVIESGELEALVDGK-- 429
L +P+LS + Y R + V G + +GE D F+++ESGE E G+
Sbjct 278 LKEVPILSDLGSYERNKLADALTSQVVEPGTAVITEGEAGDAFYLVESGEAEVTKKGESG 337
Query 430 VILRLGAGDHFGEACLLGGMRRIATVRA 457
V+ L GD+FGE LL + R ATV A
Sbjct 338 VVATLKQGDYFGEVALLNDLPRQATVTA 365
>gi|242008171|ref|XP_002424885.1| cAMP-dependent protein kinase type I-beta regulatory subunit,
putative [Pediculus humanus corporis]
gi|212508450|gb|EEB12147.1| cAMP-dependent protein kinase type I-beta regulatory subunit,
putative [Pediculus humanus corporis]
Length=206
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (37%), Positives = 48/86 (56%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G T+ +QG+ D+F+VI+ GE+E V+ +++ +G G FGE L+ G R ATVRA
Sbjct 37 GETIIQQGDEGDNFYVIDQGEVEVYVNSELVTTIGEGGSFGELALIYGTPRAATVRAKTD 96
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 97 VKLWGIDRDSYRRILMGSTIRKRKMY 122
>gi|156407904|ref|XP_001641597.1| predicted protein [Nematostella vectensis]
gi|156228736|gb|EDO49534.1| predicted protein [Nematostella vectensis]
Length=390
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (41%), Positives = 47/83 (57%), Gaps = 5/83 (6%)
Query 393 YRRLQVRSGYTLFRQGERADHFFVIESGELEALVD----GKVILRLGAGDHFGEACLLGG 448
Y R+ V T+ RQG+ D+F++I+ GE E L + + + RL FGE L+
Sbjct 147 YERV-VYQEETIIRQGDAGDNFYIIDEGEFEVLFETNGAQEKLGRLKGPGSFGELALMYN 205
Query 449 MRRIATVRACEPSVLWELDGKAF 471
R AT+RAC P VLW LD K+F
Sbjct 206 CPRSATIRACTPGVLWVLDRKSF 228
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/93 (33%), Positives = 44/93 (48%), Gaps = 17/93 (18%)
Query 382 LSRLPLLS-IDGYRRLQV---------RSGYTLFRQGERADHFFVIESGELEALVDG--- 428
L R+P+LS + Y R + R + RQ + AD + IESG +E +
Sbjct 247 LERIPVLSQLTAYERTSLADALTTSVYRDEECIIRQDDPADCLYFIESGIVEISIRDSKD 306
Query 429 ----KVILRLGAGDHFGEACLLGGMRRIATVRA 457
KVI G G++FGE L+ +R A+V A
Sbjct 307 RSKVKVISTAGPGEYFGELALVNKTKRGASVHA 339
>gi|183980364|ref|YP_001848655.1| hypothetical protein MMAR_0333 [Mycobacterium marinum M]
gi|183173690|gb|ACC38800.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=676
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/126 (37%), Positives = 66/126 (53%), Gaps = 4/126 (3%)
Query 382 LSRLPLLSIDGY----RRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAG 437
L+ LP L+++ R+ V +G + RQG+R D F++I SG +A V+G+ + LG G
Sbjct 430 LAPLPALALEQLARTATRMAVPAGSDVIRQGDRGDRFYMIASGLADATVNGRRVATLGPG 489
Query 438 DHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAG 497
FGE LL + R ATV A + L +D F AL + A G+ARTRL
Sbjct 490 GSFGEIALLHDVARSATVTARKDLDLVAVDRAEFLAALSSNTAAGLRLGGLARTRLGTVP 549
Query 498 ASESLM 503
E L+
Sbjct 550 VEERLI 555
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (35%), Positives = 42/81 (52%), Gaps = 0/81 (0%)
Query 391 DGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMR 450
D + L G + +G+ D ++VI G + L DG + LG G+ FGE +L +
Sbjct 591 DTAKVLAAPDGALITCEGDHGDTYYVILEGAAQVLDDGTAVHHLGPGEGFGEQAILRDVP 650
Query 451 RIATVRACEPSVLWELDGKAF 471
R ATVRA + L +D +AF
Sbjct 651 RTATVRAVGDTTLVAVDREAF 671
>gi|221060000|ref|XP_002260645.1| cGMP-dependent protein kinase [Plasmodium knowlesi strain H]
gi|193810719|emb|CAQ42617.1| cGMP-dependent protein kinase, putative [Plasmodium knowlesi
strain H]
Length=845
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (30%), Positives = 64/124 (52%), Gaps = 3/124 (2%)
Query 351 DEMSSDHPHL--GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQV-RSGYTLFRQ 407
D + +H L L + +++ S L ++ L+ +L++ Y + V +SG + +Q
Sbjct 21 DTLMEEHLQLREKLSEDIEMIKSSLKNNLVCSTLNDNEILTLSNYMQFFVFKSGDLVIKQ 80
Query 408 GERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELD 467
GE+ +FF+I SG+ + V+ K + +G G FGEA L+ +R AT+ A LW +
Sbjct 81 GEKGSYFFIINSGKFDVYVNDKKVKSMGKGSSFGEAALIHNTQRSATIMAETDGTLWGVQ 140
Query 468 GKAF 471
F
Sbjct 141 RSTF 144
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (31%), Positives = 48/91 (53%), Gaps = 1/91 (1%)
Query 388 LSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLG 447
L I+ +R + G + ++GE F++I++GE+E +GK + LG D+FGE LL
Sbjct 421 LLIEAFRTTRYEEGDYIIQEGEVGSRFYIIKNGEVEVTKNGKRLRTLGKNDYFGERALLY 480
Query 448 GMRRIATVRACEPSV-LWELDGKAFGDALHG 477
R A++ + +V W +D F + G
Sbjct 481 DEPRTASIISKATNVECWFVDKSVFLQIIQG 511
>gi|218247518|ref|YP_002372889.1| cyclic nucleotide-binding protein [Cyanothece sp. PCC 8801]
gi|257061146|ref|YP_003139034.1| CopG/Arc/MetJ family transcriptional regulator [Cyanothece sp.
PCC 8802]
gi|218167996|gb|ACK66733.1| cyclic nucleotide-binding protein [Cyanothece sp. PCC 8801]
gi|256591312|gb|ACV02199.1| putative transcriptional regulator, Crp/Fnr family [Cyanothece
sp. PCC 8802]
Length=425
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (43%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 398 VRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRA 457
V+ + + R+G++ D+F++I GE E + KVI LGAG+ FGE LL G R ATV A
Sbjct 142 VKPHHVICREGDQGDYFYMIAQGEAEVIKGRKVITVLGAGEIFGEMSLLTGEPRSATVIA 201
Query 458 CEPSVLWELDGKAFGDAL 475
P L++L+ + FG L
Sbjct 202 RTPMELYQLNEENFGQVL 219
>gi|47217998|emb|CAG11403.1| unnamed protein product [Tetraodon nigroviridis]
Length=229
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (35%), Positives = 50/87 (58%), Gaps = 0/87 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
+G T+ +QG+ D+F+VI+ GE++ V+G+++ +G G FGE L+ G R ATV+A
Sbjct 8 AGETVIQQGDEGDNFYVIDQGEVDVYVNGELVTNIGEGGSFGELALIYGTPRAATVKAKT 67
Query 460 PSVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 68 DLKLWGIDRDSYRRILMGSTLRKRKMY 94
>gi|50555167|ref|XP_504992.1| YALI0F04422p [Yarrowia lipolytica]
gi|54036105|sp|Q6C2X0.1|KAPR_YARLI RecName: Full=cAMP-dependent protein kinase regulatory subunit;
Short=PKA regulatory subunit
gi|49650862|emb|CAG77799.1| YALI0F04422p [Yarrowia lipolytica]
Length=375
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (42%), Positives = 41/72 (57%), Gaps = 0/72 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
SG + QG+ D+F+++ESG +E + DG + G G FGE L+ R ATV A +
Sbjct 166 SGEKIITQGDEGDYFYIVESGAVEFIKDGVKVNSSGPGSSFGELALMYNAPRAATVVATQ 225
Query 460 PSVLWELDGKAF 471
P VLW LD F
Sbjct 226 PCVLWSLDRVTF 237
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (37%), Positives = 45/88 (52%), Gaps = 12/88 (13%)
Query 382 LSRLPLLS-IDGYRRLQ---------VRSGYTLFRQGERADHFFVIESGELEALVDGK-- 429
L +P+LS + Y R + V G + +GE D F+++ESGE E G+
Sbjct 256 LKEVPILSDLGSYERNKLADALTSQVVEPGTAVITEGEAGDAFYLVESGEAEVTKKGESG 315
Query 430 VILRLGAGDHFGEACLLGGMRRIATVRA 457
V+ L GD+FGE LL + R ATV A
Sbjct 316 VVATLKQGDYFGEVALLNDLPRQATVTA 343
>gi|289740607|gb|ADD19051.1| CAMP-dependent protein kinase [Glossina morsitans morsitans]
Length=349
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (35%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 401 GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEP 460
G + +QG+ D+F+VI+ GE+E V+ +++ +G G FGE L+ G R ATVRA
Sbjct 128 GENIIQQGDEGDNFYVIDQGEVEVFVNSEMVTTIGDGGSFGELALIYGTPRAATVRAKTD 187
Query 461 SVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 188 VKLWGIDRDSYRRILMGSTIRKRKMY 213
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/113 (34%), Positives = 51/113 (46%), Gaps = 17/113 (15%)
Query 380 QALSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESG-------EL 422
+ LSR+ +L S+D + RL V G T+ +QGE D F++I G
Sbjct 215 EFLSRVSILESLDKWERLTVADALEPVSFEDGETIVKQGEPGDDFYIIVEGCAVVLQRRA 274
Query 423 EALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
E + + RLG D+FGE LL R ATV A P +LD F L
Sbjct 275 EQGDEPAEVGRLGPSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL 327
>gi|328716740|ref|XP_001950358.2| PREDICTED: cAMP-dependent protein kinase type I regulatory subunit-like
[Acyrthosiphon pisum]
Length=325
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/87 (36%), Positives = 48/87 (56%), Gaps = 0/87 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
G ++ +QG+ D+F+VI+ GE+E V+ +++ +G G FGE L+ G R ATVRA
Sbjct 104 QGESIIQQGDEGDNFYVIDVGEVEVYVNSELVTVIGEGGSFGELALIHGTPRAATVRAKT 163
Query 460 PSVLWELDGKAFGDALHGDAAMREIAY 486
LW LD ++ L G + Y
Sbjct 164 DMKLWGLDRDSYRRILMGSTIRKRKMY 190
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/110 (37%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query 382 LSRLPLL-SIDGYRRLQV---------RSGYTLFRQGERADHFFVIESGE---LEALVDG 428
LSR+ +L S+D + RL V G T+ RQGE+ D F++I G L+ V+G
Sbjct 194 LSRVSILESLDKWERLTVADALEPVSFDDGETIVRQGEQGDDFYIIVEGTALVLQQRVEG 253
Query 429 KVIL---RLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDAL 475
+ ++ RL D+FGE LL R ATV A P +LD F L
Sbjct 254 ETLIEVGRLAPSDYFGEIALLLDRPRAATVVANGPLKCVKLDRARFERVL 303
>gi|68076807|ref|XP_680323.1| cGMP-dependent protein kinase 1, beta isozyme [Plasmodium berghei
strain ANKA]
gi|56501237|emb|CAH98038.1| cGMP-dependent protein kinase 1, beta isozyme, putative [Plasmodium
berghei]
Length=841
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/119 (34%), Positives = 63/119 (53%), Gaps = 7/119 (5%)
Query 359 HLGLIDQ--GDIV---ASFLNIDVPLQALSRLPLLSIDGYRRLQV-RSGYTLFRQGERAD 412
HL L D+ DIV AS N ++ L+ +L++ Y + V +SG + +QGE+
Sbjct 25 HLELRDKLTEDIVTIKASLKN-NLVCSTLNENEILALSNYMQFFVFKSGDMVIKQGEKGS 83
Query 413 HFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAF 471
+FF+I SG+ + V+ K + L G FGEA L+ +R AT++A LW + F
Sbjct 84 YFFIINSGKFDVYVNDKKVKTLTKGSSFGEAALIHNTQRSATIKAGTNGTLWGVQRSTF 142
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/91 (28%), Positives = 48/91 (53%), Gaps = 1/91 (1%)
Query 388 LSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLG 447
L I+ ++ + G + ++GE F++I++GE+E + + K + LG D+FGE L+
Sbjct 418 LLIEAFKTTRYEEGDYIIQEGEVGSRFYIIKAGEVEIVKNNKRLRTLGKNDYFGERALIY 477
Query 448 GMRRIATVRACEPSV-LWELDGKAFGDALHG 477
R A+V + ++ W +D F + G
Sbjct 478 DEPRTASVISTVNNLECWYVDKSVFLQIIEG 508
>gi|317419207|emb|CBN81244.1| cAMP-dependent protein kinase type I-alpha regulatory subunit
[Dicentrarchus labrax]
Length=319
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/82 (38%), Positives = 48/82 (59%), Gaps = 0/82 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
+G T+ QG+ D+F+VI+ GE++ V+ + + +G G FGE L+ G R ATVRA
Sbjct 159 AGETVILQGDEGDNFYVIDQGEMDVYVNNEWVTSIGEGGSFGELALIYGTPRAATVRAKT 218
Query 460 PSVLWELDGKAFGDALHGDAAM 481
LW +D ++ L G AA+
Sbjct 219 NVKLWGIDRDSYRRILMGSAAV 240
>gi|321473700|gb|EFX84667.1| hypothetical protein DAPPUDRAFT_92349 [Daphnia pulex]
Length=379
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (41%), Positives = 43/72 (60%), Gaps = 0/72 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
SG + +Q + D+F+VI+ GE+E VDG ++ +G G FGE L+ G R ATV+A
Sbjct 153 SGEVIIQQNDEGDNFYVIDQGEVEVFVDGNMVTVIGEGGSFGELALIYGTPRAATVKAKT 212
Query 460 PSVLWELDGKAF 471
LW LD ++
Sbjct 213 DVKLWGLDRDSY 224
>gi|345492835|ref|XP_003426938.1| PREDICTED: cAMP-dependent protein kinase type II regulatory subunit-like
isoform 6 [Nasonia vitripennis]
Length=392
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (38%), Positives = 44/89 (50%), Gaps = 0/89 (0%)
Query 398 VRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRA 457
V++G + RQG+ D+F+VIE G E V +I FGE LL M R ATV+A
Sbjct 160 VQAGEFIIRQGDDGDNFYVIEKGRFEVYVKDTLIHTYDNSGAFGELALLYNMPRAATVKA 219
Query 458 CEPSVLWELDGKAFGDALHGDAAMREIAY 486
P LW +D + F L A + Y
Sbjct 220 ISPGTLWAMDRQTFRRILLKSAYKKRKMY 248
>gi|156554114|ref|XP_001601087.1| PREDICTED: cAMP-dependent protein kinase type II regulatory subunit-like
isoform 1 [Nasonia vitripennis]
gi|345492826|ref|XP_003426934.1| PREDICTED: cAMP-dependent protein kinase type II regulatory subunit-like
isoform 2 [Nasonia vitripennis]
gi|345492828|ref|XP_003426935.1| PREDICTED: cAMP-dependent protein kinase type II regulatory subunit-like
isoform 3 [Nasonia vitripennis]
gi|345492831|ref|XP_003426936.1| PREDICTED: cAMP-dependent protein kinase type II regulatory subunit-like
isoform 4 [Nasonia vitripennis]
gi|345492833|ref|XP_003426937.1| PREDICTED: cAMP-dependent protein kinase type II regulatory subunit-like
isoform 5 [Nasonia vitripennis]
Length=378
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (38%), Positives = 44/89 (50%), Gaps = 0/89 (0%)
Query 398 VRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRA 457
V++G + RQG+ D+F+VIE G E V +I FGE LL M R ATV+A
Sbjct 146 VQAGEFIIRQGDDGDNFYVIEKGRFEVYVKDTLIHTYDNSGAFGELALLYNMPRAATVKA 205
Query 458 CEPSVLWELDGKAFGDALHGDAAMREIAY 486
P LW +D + F L A + Y
Sbjct 206 ISPGTLWAMDRQTFRRILLKSAYKKRKMY 234
>gi|323456339|gb|EGB12206.1| hypothetical protein AURANDRAFT_20216 [Aureococcus anophagefferens]
Length=651
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/94 (39%), Positives = 50/94 (54%), Gaps = 1/94 (1%)
Query 379 LQALSRLPLLS-IDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAG 437
ALS +L I ++ + SG + ++G+ D F+V+ SG E LV K + AG
Sbjct 53 FSALSTTDILQVIHRMKKHERPSGDVVIQEGDEGDTFYVLFSGTAEILVGAKKVGEYAAG 112
Query 438 DHFGEACLLGGMRRIATVRACEPSVLWELDGKAF 471
FGE LL +R AT+RA P VLW +D K F
Sbjct 113 HSFGELALLYSAKRAATIRATSPCVLWSVDIKTF 146
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query 371 SFLNIDVPL-QALSRLPLLSI-DGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDG 428
+FL VPL Q L L + D + + G+ + +GE+ D FF+IESGE++
Sbjct 163 AFLK-KVPLMQGLDTATLQKVADALQSVSFPEGHKIITEGEQGDDFFIIESGEVKCTHTK 221
Query 429 -----KVILRLGAGDHFGEACLLGGMRRIATVRA 457
+ +L L GD+FGE L+ R A RA
Sbjct 222 PSGGEQHLLTLKRGDYFGEMALMLDEPRHANPRA 255
>gi|165918681|ref|ZP_02218767.1| putative S-adenosyl-L-homocysteine hydrolase [Coxiella burnetii
RSA 334]
gi|165917616|gb|EDR36220.1| putative S-adenosyl-L-homocysteine hydrolase [Coxiella burnetii
RSA 334]
Length=194
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/186 (27%), Positives = 85/186 (46%), Gaps = 16/186 (8%)
Query 116 RVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCAL-GFPVINIARSSAKLLY 174
+++LD GG L+ + VIG+E+T+AG + L FP+ +A +AK +
Sbjct 11 EILILDHGGYALSFIPEQILRKYKVIGVEKTTAGLINLDAQGLPPFPLFGVANCAAKKIL 70
Query 175 ESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCM- 233
ESP+IA + + +++ + G G+IG A+ D L + +V VYD +
Sbjct 71 ESPLIAEAIVKKLLPLIPIKENNLTCGVIGYGSIGKAITDKLLSMDHKVIVYDNDPNQLR 130
Query 234 ---------TPIDLPNAIGGYDVIIGATG---ATSVPASMHELLRPGVLLMSASSSDREF 281
T +LP + D I G TG ATS+ + L L+S SS++
Sbjct 131 SVNKMKNLATTNELPALVASSDYIFGCTGRDVATSIDS--FRLSPKNKTLISCSSNNLSN 188
Query 282 DAVALR 287
+ ++
Sbjct 189 KKITVK 194
>gi|58000450|ref|NP_001009989.1| protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue
specific extinguisher 1) a [Danio rerio]
gi|56971870|gb|AAH88390.1| Prkar1a protein [Danio rerio]
gi|118764392|gb|AAI28800.1| Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue
specific extinguisher 1) [Danio rerio]
gi|169154843|emb|CAQ15424.1| protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue
specific extinguisher 1) [Danio rerio]
Length=379
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/87 (35%), Positives = 48/87 (56%), Gaps = 0/87 (0%)
Query 400 SGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACE 459
+G T+ +QG+ D+F+VI+ GE++ V+ + + +G G FGE L+ G R ATVRA
Sbjct 158 AGETVIQQGDEGDNFYVIDQGEMDVYVNNEWVTSIGEGGSFGELALIYGTPRAATVRAKT 217
Query 460 PSVLWELDGKAFGDALHGDAAMREIAY 486
LW +D ++ L G + Y
Sbjct 218 NVKLWGIDRDSYRRILMGSTLRKRKMY 244
Lambda K H
0.322 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1089650734560
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40