BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0108c

Length=69
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|148821300|ref|YP_001286054.1|  hypothetical protein TBFG_10109...   141    3e-32
gi|308231464|ref|ZP_07412527.2|  hypothetical protein TMAG_01240 ...   141    3e-32
gi|308370315|ref|ZP_07421046.2|  hypothetical protein TMCG_02316 ...   141    4e-32
gi|15607250|ref|NP_214622.1|  hypothetical protein Rv0108c [Mycob...   140    5e-32
gi|15839489|ref|NP_334526.1|  hypothetical protein MT0117 [Mycoba...   138    2e-31
gi|183980329|ref|YP_001848620.1|  hypothetical protein MMAR_0298 ...   126    9e-28
gi|240168080|ref|ZP_04746739.1|  hypothetical protein MkanA1_0211...   124    4e-27
gi|118619870|ref|YP_908202.1|  hypothetical protein MUL_4825 [Myc...   123    1e-26
gi|296167261|ref|ZP_06849664.1|  conserved hypothetical protein [...   118    2e-25
gi|289748579|ref|ZP_06507957.1|  LOW QUALITY PROTEIN: hypothetica...   117    6e-25
gi|342859494|ref|ZP_08716148.1|  hypothetical protein MCOL_11458 ...   113    9e-24
gi|118466330|ref|YP_884333.1|  hypothetical protein MAV_5217 [Myc...   110    7e-23
gi|41409597|ref|NP_962433.1|  hypothetical protein MAP3499c [Myco...   109    1e-22
gi|254822826|ref|ZP_05227827.1|  hypothetical protein MintA_23044...   105    2e-21
gi|254777562|ref|ZP_05219078.1|  hypothetical protein MaviaA2_232...  88.2    4e-16
gi|239612489|gb|EEQ89476.1|  alpha-1,2-mannosyltransferase [Ajell...  34.3    5.7  
gi|261202916|ref|XP_002628672.1|  alpha-1,2-mannosyltransferase [...  34.3    5.7  
gi|225684130|gb|EEH22414.1|  mannosyltransferase [Paracoccidioide...  34.3    6.4  
gi|226293564|gb|EEH48984.1|  alpha-1,3-mannosyltransferase alg-2 ...  34.3    7.0  


>gi|148821300|ref|YP_001286054.1| hypothetical protein TBFG_10109 [Mycobacterium tuberculosis F11]
 gi|253797026|ref|YP_003030027.1| hypothetical protein TBMG_00109 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233502|ref|ZP_04926828.1| hypothetical protein TBCG_00108 [Mycobacterium tuberculosis C]
 gi|124603295|gb|EAY61570.1| hypothetical protein TBCG_00108 [Mycobacterium tuberculosis C]
 gi|148719827|gb|ABR04452.1| hypothetical protein TBFG_10109 [Mycobacterium tuberculosis F11]
 gi|253318529|gb|ACT23132.1| hypothetical protein TBMG_00109 [Mycobacterium tuberculosis KZN 
1435]
 gi|323717279|gb|EGB26486.1| hypothetical protein TMMG_00533 [Mycobacterium tuberculosis CDC1551A]
Length=77

 Score =  141 bits (355),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH
Sbjct  9   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  68

Query  61  VGRAHHRIL  69
           VGRAHHRIL
Sbjct  69  VGRAHHRIL  77


>gi|308231464|ref|ZP_07412527.2| hypothetical protein TMAG_01240 [Mycobacterium tuberculosis SUMu001]
 gi|308378547|ref|ZP_07482954.2| hypothetical protein TMIG_00392 [Mycobacterium tuberculosis SUMu009]
 gi|308380896|ref|ZP_07491404.2| hypothetical protein TMKG_01289 [Mycobacterium tuberculosis SUMu011]
 gi|308217228|gb|EFO76627.1| hypothetical protein TMAG_01240 [Mycobacterium tuberculosis SUMu001]
 gi|308352230|gb|EFP41081.1| hypothetical protein TMIG_00392 [Mycobacterium tuberculosis SUMu009]
 gi|308360135|gb|EFP48986.1| hypothetical protein TMKG_01289 [Mycobacterium tuberculosis SUMu011]
Length=80

 Score =  141 bits (355),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH
Sbjct  12  LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  71

Query  61  VGRAHHRIL  69
           VGRAHHRIL
Sbjct  72  VGRAHHRIL  80


>gi|308370315|ref|ZP_07421046.2| hypothetical protein TMCG_02316 [Mycobacterium tuberculosis SUMu003]
 gi|308375069|ref|ZP_07442565.2| hypothetical protein TMGG_01583 [Mycobacterium tuberculosis SUMu007]
 gi|308379696|ref|ZP_07487187.2| hypothetical protein TMJG_01291 [Mycobacterium tuberculosis SUMu010]
 gi|308332431|gb|EFP21282.1| hypothetical protein TMCG_02316 [Mycobacterium tuberculosis SUMu003]
 gi|308347604|gb|EFP36455.1| hypothetical protein TMGG_01583 [Mycobacterium tuberculosis SUMu007]
 gi|308356164|gb|EFP45015.1| hypothetical protein TMJG_01291 [Mycobacterium tuberculosis SUMu010]
Length=96

 Score =  141 bits (355),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH
Sbjct  28  LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  87

Query  61  VGRAHHRIL  69
           VGRAHHRIL
Sbjct  88  VGRAHHRIL  96


>gi|15607250|ref|NP_214622.1| hypothetical protein Rv0108c [Mycobacterium tuberculosis H37Rv]
 gi|31791286|ref|NP_853779.1| hypothetical protein Mb0112c [Mycobacterium bovis AF2122/97]
 gi|121636021|ref|YP_976244.1| hypothetical protein BCG_0141c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 37 more sequence titles
 Length=69

 Score =  140 bits (354),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 68/69 (99%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           +VPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH
Sbjct  1   MVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60

Query  61  VGRAHHRIL  69
           VGRAHHRIL
Sbjct  61  VGRAHHRIL  69


>gi|15839489|ref|NP_334526.1| hypothetical protein MT0117 [Mycobacterium tuberculosis CDC1551]
 gi|298527499|ref|ZP_07014908.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|340625143|ref|YP_004743595.1| hypothetical protein MCAN_01111 [Mycobacterium canettii CIPT 
140010059]
 gi|13879596|gb|AAK44340.1| hypothetical protein MT0117 [Mycobacterium tuberculosis CDC1551]
 gi|298497293|gb|EFI32587.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|340003333|emb|CCC42452.1| hypothetical protein MCAN_01111 [Mycobacterium canettii CIPT 
140010059]
Length=68

 Score =  138 bits (348),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 67/68 (99%), Positives = 68/68 (100%), Gaps = 0/68 (0%)

Query  2   VPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHV  61
           +PVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHV
Sbjct  1   MPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHV  60

Query  62  GRAHHRIL  69
           GRAHHRIL
Sbjct  61  GRAHHRIL  68


>gi|183980329|ref|YP_001848620.1| hypothetical protein MMAR_0298 [Mycobacterium marinum M]
 gi|183173655|gb|ACC38765.1| conserved protein [Mycobacterium marinum M]
Length=90

 Score =  126 bits (317),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 62/69 (90%), Positives = 64/69 (93%), Gaps = 0/69 (0%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           LV VE LHSGDPITDVNGGGQRYIVLESK VGD CVVLELESRV+HQLQVIEKSFP GYH
Sbjct  22  LVAVENLHSGDPITDVNGGGQRYIVLESKAVGDGCVVLELESRVDHQLQVIEKSFPTGYH  81

Query  61  VGRAHHRIL  69
           VGRA+HRIL
Sbjct  82  VGRANHRIL  90


>gi|240168080|ref|ZP_04746739.1| hypothetical protein MkanA1_02117 [Mycobacterium kansasii ATCC 
12478]
Length=69

 Score =  124 bits (312),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 59/69 (86%), Positives = 64/69 (93%), Gaps = 0/69 (0%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           +V VE LHSGDPITD+NGGGQRYIVLESKTV D CVVLELESRV+H+LQVIEKSFP GYH
Sbjct  1   MVAVENLHSGDPITDINGGGQRYIVLESKTVSDGCVVLELESRVDHRLQVIEKSFPTGYH  60

Query  61  VGRAHHRIL  69
           VGRA+HRIL
Sbjct  61  VGRANHRIL  69


>gi|118619870|ref|YP_908202.1| hypothetical protein MUL_4825 [Mycobacterium ulcerans Agy99]
 gi|118571980|gb|ABL06731.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=68

 Score =  123 bits (308),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 59/68 (87%), Positives = 62/68 (92%), Gaps = 0/68 (0%)

Query  2   VPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHV  61
           + VE LHSGDPITDVNGGGQRYIVLESK VGD CVVLELESRV+HQLQVIEKSFP GYHV
Sbjct  1   MAVENLHSGDPITDVNGGGQRYIVLESKAVGDGCVVLELESRVDHQLQVIEKSFPTGYHV  60

Query  62  GRAHHRIL  69
           GR +HRIL
Sbjct  61  GRVNHRIL  68


>gi|296167261|ref|ZP_06849664.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897361|gb|EFG76964.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=74

 Score =  118 bits (296),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 60/69 (87%), Positives = 62/69 (90%), Gaps = 3/69 (4%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           LVPVETLHSGDPI D    GQRYIVLESK VGDSCVVLELESRV+HQLQVIEKSFPAGYH
Sbjct  9   LVPVETLHSGDPIMDC---GQRYIVLESKAVGDSCVVLELESRVDHQLQVIEKSFPAGYH  65

Query  61  VGRAHHRIL  69
           V RA+HRIL
Sbjct  66  VNRANHRIL  74


>gi|289748579|ref|ZP_06507957.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_00467 [Mycobacterium 
tuberculosis T92]
 gi|289689166|gb|EFD56595.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_00467 [Mycobacterium 
tuberculosis T92]
Length=70

 Score =  117 bits (293),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 57/58 (99%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAG  58
           +VPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAG
Sbjct  1   MVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAG  58


>gi|342859494|ref|ZP_08716148.1| hypothetical protein MCOL_11458 [Mycobacterium colombiense CECT 
3035]
 gi|342133735|gb|EGT86938.1| hypothetical protein MCOL_11458 [Mycobacterium colombiense CECT 
3035]
Length=74

 Score =  113 bits (282),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 3/68 (4%)

Query  2   VPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHV  61
           VPVE LHSGDPITD    GQRYIVLESK +GDSCVVLELESRV+H LQVIEKSFPAGY V
Sbjct  10  VPVEKLHSGDPITDC---GQRYIVLESKALGDSCVVLELESRVDHHLQVIEKSFPAGYQV  66

Query  62  GRAHHRIL  69
            RAHHRIL
Sbjct  67  DRAHHRIL  74


>gi|118466330|ref|YP_884333.1| hypothetical protein MAV_5217 [Mycobacterium avium 104]
 gi|118167617|gb|ABK68514.1| conserved hypothetical protein [Mycobacterium avium 104]
 gi|336459966|gb|EGO38878.1| hypothetical protein MAPs_46100 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=76

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 57/69 (83%), Positives = 61/69 (89%), Gaps = 4/69 (5%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           LVPVE LHSGDPITD    GQRYIVLESKT+ D CVVLELESRV+HQLQVIEKSFP GYH
Sbjct  12  LVPVENLHSGDPITDC---GQRYIVLESKTLND-CVVLELESRVDHQLQVIEKSFPTGYH  67

Query  61  VGRAHHRIL  69
           VGRA+HR+L
Sbjct  68  VGRANHRVL  76


>gi|41409597|ref|NP_962433.1| hypothetical protein MAP3499c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398428|gb|AAS06049.1| hypothetical protein MAP_3499c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=65

 Score =  109 bits (273),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 56/69 (82%), Positives = 61/69 (89%), Gaps = 4/69 (5%)

Query  1   LVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYH  60
           +VPVE LHSGDPITD    GQRYIVLESKT+ D CVVLELESRV+HQLQVIEKSFP GYH
Sbjct  1   MVPVENLHSGDPITDC---GQRYIVLESKTLND-CVVLELESRVDHQLQVIEKSFPTGYH  56

Query  61  VGRAHHRIL  69
           VGRA+HR+L
Sbjct  57  VGRANHRVL  65


>gi|254822826|ref|ZP_05227827.1| hypothetical protein MintA_23044 [Mycobacterium intracellulare 
ATCC 13950]
Length=73

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 55/68 (81%), Positives = 58/68 (86%), Gaps = 4/68 (5%)

Query  2   VPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHV  61
           VPVE LHSGDPITD    GQRYIVLESK + D CVVLELESRV+HQLQVIEKSFP GY V
Sbjct  10  VPVEKLHSGDPITDC---GQRYIVLESKALSD-CVVLELESRVDHQLQVIEKSFPTGYQV  65

Query  62  GRAHHRIL  69
           GRA+HRIL
Sbjct  66  GRANHRIL  73


>gi|254777562|ref|ZP_05219078.1| hypothetical protein MaviaA2_23236 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=52

 Score = 88.2 bits (217),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 43/50 (86%), Positives = 47/50 (94%), Gaps = 1/50 (2%)

Query  20  GQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHVGRAHHRIL  69
           GQRYIVLESKT+ D CVVLELESRV+HQLQVIEKSFP GYHVGRA+HR+L
Sbjct  4   GQRYIVLESKTLND-CVVLELESRVDHQLQVIEKSFPTGYHVGRANHRVL  52


>gi|239612489|gb|EEQ89476.1| alpha-1,2-mannosyltransferase [Ajellomyces dermatitidis ER-3]
 gi|327350546|gb|EGE79403.1| alpha-1,2-mannosyltransferase [Ajellomyces dermatitidis ATCC 
18188]
Length=506

 Score = 34.3 bits (77),  Expect = 5.7, Method: Composition-based stats.
 Identities = 14/30 (47%), Positives = 20/30 (67%), Gaps = 0/30 (0%)

Query  1    LVPVETLHSGDPITDVNGGGQRYIVLESKT  30
            +VPVE +H+G P+  VN GG    ++E KT
Sbjct  377  IVPVEAMHAGLPVLAVNNGGPLETIVEGKT  406


>gi|261202916|ref|XP_002628672.1| alpha-1,2-mannosyltransferase [Ajellomyces dermatitidis SLH14081]
 gi|239590769|gb|EEQ73350.1| alpha-1,2-mannosyltransferase [Ajellomyces dermatitidis SLH14081]
Length=506

 Score = 34.3 bits (77),  Expect = 5.7, Method: Composition-based stats.
 Identities = 14/30 (47%), Positives = 20/30 (67%), Gaps = 0/30 (0%)

Query  1    LVPVETLHSGDPITDVNGGGQRYIVLESKT  30
            +VPVE +H+G P+  VN GG    ++E KT
Sbjct  377  IVPVEAMHAGLPVLAVNNGGPLETIVEGKT  406


>gi|225684130|gb|EEH22414.1| mannosyltransferase [Paracoccidioides brasiliensis Pb03]
Length=466

 Score = 34.3 bits (77),  Expect = 6.4, Method: Composition-based stats.
 Identities = 14/30 (47%), Positives = 20/30 (67%), Gaps = 0/30 (0%)

Query  1    LVPVETLHSGDPITDVNGGGQRYIVLESKT  30
            +VPVE +H+G P+  VN GG    ++E KT
Sbjct  337  IVPVEAMHAGLPVLAVNNGGPLETIVEGKT  366


>gi|226293564|gb|EEH48984.1| alpha-1,3-mannosyltransferase alg-2 [Paracoccidioides brasiliensis 
Pb18]
Length=443

 Score = 34.3 bits (77),  Expect = 7.0, Method: Composition-based stats.
 Identities = 14/30 (47%), Positives = 20/30 (67%), Gaps = 0/30 (0%)

Query  1    LVPVETLHSGDPITDVNGGGQRYIVLESKT  30
            +VPVE +H+G P+  VN GG    ++E KT
Sbjct  314  IVPVEAMHAGLPVLAVNNGGPLETIVEGKT  343



Lambda     K      H
   0.319    0.139    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128671965800




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40