BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0116c

Length=251
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|308370318|ref|ZP_07421055.2|  conserved membrane protein [Myco...   501    5e-140
gi|15607258|ref|NP_214630.1|  hypothetical protein Rv0116c [Mycob...   501    6e-140
gi|289445646|ref|ZP_06435390.1|  conserved membrane protein [Myco...   499    1e-139
gi|289572696|ref|ZP_06452923.1|  conserved hypothetical protein [...   498    4e-139
gi|340625151|ref|YP_004743603.1|  hypothetical protein MCAN_01191...   494    6e-138
gi|15839497|ref|NP_334534.1|  hypothetical protein MT0125 [Mycoba...   424    5e-117
gi|183980347|ref|YP_001848638.1|  hypothetical protein MMAR_0316 ...   398    5e-109
gi|240168104|ref|ZP_04746763.1|  hypothetical protein MkanA1_0223...   379    2e-103
gi|118619856|ref|YP_908188.1|  hypothetical protein MUL_4806 [Myc...   378    3e-103
gi|254777540|ref|ZP_05219056.1|  hypothetical protein MaviaA2_231...   372    2e-101
gi|15828436|ref|NP_302699.1|  hypothetical protein ML2664 [Mycoba...   371    4e-101
gi|296167284|ref|ZP_06849687.1|  ErfK/YbiS/YcfS/YnhG family prote...   369    2e-100
gi|41409618|ref|NP_962454.1|  hypothetical protein MAP3520c [Myco...   368    5e-100
gi|118467140|ref|YP_884310.1|  ErfK/YbiS/YcfS/YnhG family protein...   359    2e-97 
gi|254822802|ref|ZP_05227803.1|  hypothetical protein MintA_22924...   357    1e-96 
gi|336459945|gb|EGO38857.1|  hypothetical protein MAPs_45880 [Myc...   357    1e-96 
gi|342859471|ref|ZP_08716125.1|  hypothetical protein MCOL_11343 ...   347    1e-93 
gi|333992827|ref|YP_004525441.1|  hypothetical protein JDM601_418...   300    9e-80 
gi|118473165|ref|YP_887832.1|  ErfK/YbiS/YcfS/YnhG family protein...   288    7e-76 
gi|169630247|ref|YP_001703896.1|  hypothetical protein MAB_3165c ...   268    5e-70 
gi|145223885|ref|YP_001134563.1|  ErfK/YbiS/YcfS/YnhG family prot...   268    6e-70 
gi|119868805|ref|YP_938757.1|  ErfK/YbiS/YcfS/YnhG family protein...   259    3e-67 
gi|126435339|ref|YP_001071030.1|  ErfK/YbiS/YcfS/YnhG family prot...   258    5e-67 
gi|108799695|ref|YP_639892.1|  ErfK/YbiS/YcfS/YnhG [Mycobacterium...   258    5e-67 
gi|315441559|ref|YP_004074436.1|  hypothetical protein Mspyr1_544...   258    7e-67 
gi|126437084|ref|YP_001072775.1|  ErfK/YbiS/YcfS/YnhG family prot...   256    2e-66 
gi|240173371|ref|ZP_04752029.1|  hypothetical protein MkanA1_2892...   252    3e-65 
gi|120403999|ref|YP_953828.1|  ErfK/YbiS/YcfS/YnhG family protein...   246    2e-63 
gi|317507840|ref|ZP_07965541.1|  ykud domain-containing protein [...   246    2e-63 
gi|296392896|ref|YP_003657780.1|  ErfK/YbiS/YcfS/YnhG family prot...   239    3e-61 
gi|41409910|ref|NP_962746.1|  hypothetical protein MAP3812c [Myco...   236    2e-60 
gi|296167732|ref|ZP_06849949.1|  ErfK/YbiS/YcfS/YnhG family prote...   233    2e-59 
gi|342859186|ref|ZP_08715840.1|  hypothetical protein MCOL_09918 ...   233    2e-59 
gi|226360070|ref|YP_002777848.1|  hypothetical protein ROP_06560 ...   233    3e-59 
gi|54025398|ref|YP_119640.1|  hypothetical protein nfa34280 [Noca...   231    7e-59 
gi|254821522|ref|ZP_05226523.1|  hypothetical protein MintA_16430...   221    8e-56 
gi|111017939|ref|YP_700911.1|  lipoprotein [Rhodococcus jostii RH...   218    7e-55 
gi|315446271|ref|YP_004079150.1|  peptidoglycan transpeptidase pr...   217    1e-54 
gi|254777271|ref|ZP_05218787.1|  hypothetical protein MaviaA2_217...   217    1e-54 
gi|145221989|ref|YP_001132667.1|  ErfK/YbiS/YcfS/YnhG family prot...   216    2e-54 
gi|221229696|ref|YP_002503112.1|  hypothetical protein MLBr_00569...   215    6e-54 
gi|15827218|ref|NP_301481.1|  hypothetical protein ML0569 [Mycoba...   214    1e-53 
gi|118466895|ref|YP_883958.1|  ErfK/YbiS/YcfS/YnhG family protein...   214    1e-53 
gi|183983533|ref|YP_001851824.1|  hypothetical protein MMAR_3552 ...   212    5e-53 
gi|15608571|ref|NP_215949.1|  hypothetical protein Rv1433 [Mycoba...   211    1e-52 
gi|312141554|ref|YP_004008890.1|  hypothetical protein REQ_42450 ...   211    1e-52 
gi|289574111|ref|ZP_06454338.1|  conserved exported protein [Myco...   211    1e-52 
gi|339294411|gb|AEJ46522.1|  hypothetical protein CCDC5079_1332 [...   210    1e-52 
gi|169631848|ref|YP_001705497.1|  hypothetical protein MAB_4775c ...   210    1e-52 
gi|54027613|ref|YP_121855.1|  hypothetical protein nfa56390 [Noca...   209    3e-52 


>gi|308370318|ref|ZP_07421055.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308371591|ref|ZP_07425423.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308372809|ref|ZP_07429960.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 9 more sequence titles
 gi|308374629|ref|ZP_07436781.2| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308376311|ref|ZP_07438363.2| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308332440|gb|EFP21291.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308336203|gb|EFP25054.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308339806|gb|EFP28657.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308341301|gb|EFP30152.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308351526|gb|EFP40377.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|339293180|gb|AEJ45291.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5079]
 gi|339296828|gb|AEJ48938.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=254

 Score =  501 bits (1289),  Expect = 5e-140, Method: Compositional matrix adjust.
 Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF
Sbjct  4    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  63

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE
Sbjct  64   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  123

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI
Sbjct  124  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  183

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA
Sbjct  184  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  243

Query  241  VTVGDPIEVVG  251
            VTVGDPIEVVG
Sbjct  244  VTVGDPIEVVG  254


>gi|15607258|ref|NP_214630.1| hypothetical protein Rv0116c [Mycobacterium tuberculosis H37Rv]
 gi|31791294|ref|NP_853787.1| hypothetical protein Mb0120c [Mycobacterium bovis AF2122/97]
 gi|121636029|ref|YP_976252.1| hypothetical protein BCG_0150c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 58 more sequence titles
 gi|148659880|ref|YP_001281403.1| hypothetical protein MRA_0123 [Mycobacterium tuberculosis H37Ra]
 gi|148821308|ref|YP_001286062.1| hypothetical protein TBFG_10117 [Mycobacterium tuberculosis F11]
 gi|167967292|ref|ZP_02549569.1| hypothetical protein MtubH3_04342 [Mycobacterium tuberculosis 
H37Ra]
 gi|224988502|ref|YP_002643189.1| hypothetical protein JTY_0120 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253797034|ref|YP_003030035.1| hypothetical protein TBMG_00117 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233508|ref|ZP_04926834.1| hypothetical protein TBCG_00116 [Mycobacterium tuberculosis C]
 gi|254366570|ref|ZP_04982614.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
 gi|254549051|ref|ZP_05139498.1| hypothetical protein Mtube_01066 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289441485|ref|ZP_06431229.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289552367|ref|ZP_06441577.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289568010|ref|ZP_06448237.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289747883|ref|ZP_06507261.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289748589|ref|ZP_06507967.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289756178|ref|ZP_06515556.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760216|ref|ZP_06519594.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289764233|ref|ZP_06523611.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
 gi|294992960|ref|ZP_06798651.1| hypothetical protein Mtub2_00255 [Mycobacterium tuberculosis 
210]
 gi|297632590|ref|ZP_06950370.1| hypothetical protein MtubK4_00610 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297729564|ref|ZP_06958682.1| hypothetical protein MtubKR_00635 [Mycobacterium tuberculosis 
KZN R506]
 gi|298527508|ref|ZP_07014917.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306774201|ref|ZP_07412538.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306778946|ref|ZP_07417283.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306805907|ref|ZP_07442575.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|306970303|ref|ZP_07482964.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306974536|ref|ZP_07487197.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307082244|ref|ZP_07491414.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307082588|ref|ZP_07491701.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|313656891|ref|ZP_07813771.1| hypothetical protein MtubKV_00625 [Mycobacterium tuberculosis 
KZN V2475]
 gi|2909581|emb|CAA17310.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis 
H37Rv]
 gi|31616879|emb|CAD92981.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121491676|emb|CAL70134.1| Possible conserved membrane protein [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|124603301|gb|EAY61576.1| hypothetical protein TBCG_00116 [Mycobacterium tuberculosis C]
 gi|134152082|gb|EBA44127.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148504032|gb|ABQ71841.1| putative conserved membrane protein [Mycobacterium tuberculosis 
H37Ra]
 gi|148719835|gb|ABR04460.1| conserved membrane protein [Mycobacterium tuberculosis F11]
 gi|224771615|dbj|BAH24421.1| hypothetical protein JTY_0120 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253318537|gb|ACT23140.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
 gi|289414404|gb|EFD11644.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289436999|gb|EFD19492.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289541763|gb|EFD45412.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289688411|gb|EFD55899.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289689176|gb|EFD56605.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289696765|gb|EFD64194.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711739|gb|EFD75755.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
 gi|289715780|gb|EFD79792.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497302|gb|EFI32596.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308217207|gb|EFO76606.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308328067|gb|EFP16918.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308347583|gb|EFP36434.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308352208|gb|EFP41059.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308356173|gb|EFP45024.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308360113|gb|EFP48964.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308367680|gb|EFP56531.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|323717255|gb|EGB26463.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|326905875|gb|EGE52808.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
 gi|328456823|gb|AEB02246.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
 gi|341600045|emb|CCC62713.1| possible conserved membrane protein [Mycobacterium bovis BCG 
str. Moreau RDJ]
 gi|344217934|gb|AEM98564.1| hypothetical protein MTCTRI2_0119 [Mycobacterium tuberculosis 
CTRI-2]
Length=251

 Score =  501 bits (1289),  Expect = 6e-140, Method: Compositional matrix adjust.
 Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF
Sbjct  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE
Sbjct  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI
Sbjct  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA
Sbjct  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240

Query  241  VTVGDPIEVVG  251
            VTVGDPIEVVG
Sbjct  241  VTVGDPIEVVG  251


>gi|289445646|ref|ZP_06435390.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418604|gb|EFD15805.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=251

 Score =  499 bits (1286),  Expect = 1e-139, Method: Compositional matrix adjust.
 Identities = 250/251 (99%), Positives = 251/251 (100%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAV+GVAHPVVVTF
Sbjct  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVMGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE
Sbjct  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI
Sbjct  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA
Sbjct  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240

Query  241  VTVGDPIEVVG  251
            VTVGDPIEVVG
Sbjct  241  VTVGDPIEVVG  251


>gi|289572696|ref|ZP_06452923.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|339630199|ref|YP_004721841.1| hypothetical protein MAF_01170 [Mycobacterium africanum GM041182]
 gi|289537127|gb|EFD41705.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|339329555|emb|CCC25191.1| putative conserved membrane protein [Mycobacterium africanum 
GM041182]
Length=251

 Score =  498 bits (1281),  Expect = 4e-139, Method: Compositional matrix adjust.
 Identities = 250/251 (99%), Positives = 250/251 (99%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF
Sbjct  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE
Sbjct  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDALI VASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI
Sbjct  121  TGDALIRVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA
Sbjct  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240

Query  241  VTVGDPIEVVG  251
            VTVGDPIEVVG
Sbjct  241  VTVGDPIEVVG  251


>gi|340625151|ref|YP_004743603.1| hypothetical protein MCAN_01191 [Mycobacterium canettii CIPT 
140010059]
 gi|340003341|emb|CCC42460.1| putative conserved membrane protein [Mycobacterium canettii CIPT 
140010059]
Length=251

 Score =  494 bits (1271),  Expect = 6e-138, Method: Compositional matrix adjust.
 Identities = 248/251 (99%), Positives = 249/251 (99%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            M R VRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF
Sbjct  1    MCRAVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVP+RYWPPHTRVSVGVQELTEGFE
Sbjct  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPNRYWPPHTRVSVGVQELTEGFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI
Sbjct  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA
Sbjct  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240

Query  241  VTVGDPIEVVG  251
            VTVGDPIEVVG
Sbjct  241  VTVGDPIEVVG  251


>gi|15839497|ref|NP_334534.1| hypothetical protein MT0125 [Mycobacterium tuberculosis CDC1551]
 gi|13879605|gb|AAK44348.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=210

 Score =  424 bits (1090),  Expect = 5e-117, Method: Compositional matrix adjust.
 Identities = 209/210 (99%), Positives = 210/210 (100%), Gaps = 0/210 (0%)

Query  42   VSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRY  101
            +SPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRY
Sbjct  1    MSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRY  60

Query  102  WPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPI  161
            WPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPI
Sbjct  61   WPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPI  120

Query  162  GSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYAN  221
            GSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYAN
Sbjct  121  GSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYAN  180

Query  222  VSHGCINLSPDNAAWYFDAVTVGDPIEVVG  251
            VSHGCINLSPDNAAWYFDAVTVGDPIEVVG
Sbjct  181  VSHGCINLSPDNAAWYFDAVTVGDPIEVVG  210


>gi|183980347|ref|YP_001848638.1| hypothetical protein MMAR_0316 [Mycobacterium marinum M]
 gi|183173673|gb|ACC38783.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=251

 Score =  398 bits (1022),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 204/251 (82%), Positives = 227/251 (91%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRR++RYL V+VAIT++    + S ATAA+P  +PIPGVASV PANGAVVGVAHPVVVTF
Sbjct  1    MRRIIRYLFVMVAITVLAVVAAGSPATAALPAAEPIPGVASVLPANGAVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            T PVT+RRA +R+I + +P N TGHF+WV SNVV+WVP RYWP HTRVSVGVQELT GFE
Sbjct  61   TAPVTNRRAAQRTIHVLSPSNMTGHFQWVQSNVVQWVPDRYWPTHTRVSVGVQELTTGFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGD L+GVASISAHTFTVSRNG+VLRTMPAS+GKPSRPTPIGSF A+SKERTVVMDSRTI
Sbjct  121  TGDELLGVASISAHTFTVSRNGDVLRTMPASMGKPSRPTPIGSFTALSKERTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNSS+GY++TA YAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFD+
Sbjct  181  GIPLNSSEGYMITASYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDS  240

Query  241  VTVGDPIEVVG  251
            V VGDPIEVVG
Sbjct  241  VNVGDPIEVVG  251


>gi|240168104|ref|ZP_04746763.1| hypothetical protein MkanA1_02237 [Mycobacterium kansasii ATCC 
12478]
Length=251

 Score =  379 bits (973),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 200/251 (80%), Positives = 223/251 (89%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MR  VRYL V+VAIT M  A S ++A+AAVP  QP+PGVA+V PANGAVVGVAHPVVVTF
Sbjct  1    MRHAVRYLFVMVAITTMALAGSGALASAAVPLPQPVPGVAAVLPANGAVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            + PV DRRA ER+IR+++P N TGHFEWV S VV+W+P  YWP H+ +SVGVQELT+GFE
Sbjct  61   SAPVLDRRAAERAIRVTSPSNMTGHFEWVDSFVVQWIPDHYWPAHSHISVGVQELTDGFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGD L+GVASISAHTFTVSRNGEVLRTMPAS+GKPSRPTP+G+F A+SKERTVVMDSRTI
Sbjct  121  TGDELLGVASISAHTFTVSRNGEVLRTMPASMGKPSRPTPVGNFSALSKERTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNSSDGYL+TA YAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYF+ 
Sbjct  181  GIPLNSSDGYLITASYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFNT  240

Query  241  VTVGDPIEVVG  251
            V VGDPIEVV 
Sbjct  241  VNVGDPIEVVA  251


>gi|118619856|ref|YP_908188.1| hypothetical protein MUL_4806 [Mycobacterium ulcerans Agy99]
 gi|118571966|gb|ABL06717.1| conserved hypothetical secreted protein [Mycobacterium ulcerans 
Agy99]
Length=241

 Score =  378 bits (971),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 196/241 (82%), Positives = 217/241 (91%), Gaps = 0/241 (0%)

Query  11   VVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTDRRAV  70
            +VAIT++    + S ATAA+P  +PIPGVASV PAN AVVGVAHPVVVTFT PVT+RRA 
Sbjct  1    MVAITVLAVVAAGSPATAALPAAEPIPGVASVLPANRAVVGVAHPVVVTFTAPVTNRRAA  60

Query  71   ERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVAS  130
            +R+I + +P N TGHF+WV SNVV+WVP RYWP HTRVSVGVQELT GFETGD L+GVAS
Sbjct  61   QRTIHVLSPSNMTGHFQWVQSNVVQWVPDRYWPTHTRVSVGVQELTTGFETGDELLGVAS  120

Query  131  ISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGY  190
            ISAHTFTVSRNG+VLRTMPAS+GKPSRPTPIGSF A+SKERTVVMDSRTIGIPLNSS+GY
Sbjct  121  ISAHTFTVSRNGDVLRTMPASMGKPSRPTPIGSFTALSKERTVVMDSRTIGIPLNSSEGY  180

Query  191  LLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEVV  250
            ++TA YAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFD+V VGDPIEVV
Sbjct  181  MITASYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDSVNVGDPIEVV  240

Query  251  G  251
            G
Sbjct  241  G  241


>gi|254777540|ref|ZP_05219056.1| hypothetical protein MaviaA2_23116 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=252

 Score =  372 bits (956),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 185/251 (74%), Positives = 209/251 (84%), Gaps = 1/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRR  RYL V+VAIT+M     V    A+VP  QP+PG+AS+ PANGAVVGVAHP+VVTF
Sbjct  1    MRRAGRYLFVMVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASN-VVRWVPHRYWPPHTRVSVGVQELTEGF  119
            T P  DR AVERSI + +P    GHFEW   N VVR+VP+RYWP H  VSVGVQ LT GF
Sbjct  61   TAPAADRAAVERSIHVVSPAGVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGF  120

Query  120  ETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRT  179
            +TGDAL+GVASIS HTFTVSRNGEVLRTMPAS+GKPSRPTPIG+F A+ K+R+VVMDSRT
Sbjct  121  DTGDALLGVASISKHTFTVSRNGEVLRTMPASMGKPSRPTPIGNFTALEKQRSVVMDSRT  180

Query  180  IGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFD  239
            IGIPL+S +GY +TA YAVRVTWSGVYVHSAPWSV+SQGYANVSHGCINLSPDNAAWYF+
Sbjct  181  IGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGCINLSPDNAAWYFN  240

Query  240  AVTVGDPIEVV  250
             V VGDPI+VV
Sbjct  241  EVNVGDPIQVV  251


>gi|15828436|ref|NP_302699.1| hypothetical protein ML2664 [Mycobacterium leprae TN]
 gi|221230913|ref|YP_002504329.1| putative secreted protein [Mycobacterium leprae Br4923]
 gi|4200253|emb|CAA22901.1| hypothetical protein MLCB1886.04 [Mycobacterium leprae]
 gi|13093866|emb|CAC32196.1| possible secreted protein [Mycobacterium leprae]
 gi|219934020|emb|CAR72764.1| possible secreted protein [Mycobacterium leprae Br4923]
Length=251

 Score =  371 bits (953),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 190/251 (76%), Positives = 213/251 (85%), Gaps = 0/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            M + VRYL V+ AI LM  AES S + AA+P L+P P VASV P NGAVVGVAH VVVTF
Sbjct  1    MYQAVRYLLVMAAIILMAVAESGSPSVAAIPALKPTPEVASVLPTNGAVVGVAHLVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            T PVTDR A ERSIRI++P+N TGHFEW+  +VV+W+P +YWP +T VSV VQ LT GFE
Sbjct  61   TAPVTDRSAAERSIRITSPNNMTGHFEWLDGDVVQWIPTKYWPAYTHVSVEVQALTTGFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDAL+GVAS+S HTFTVSRNGEVLRTMPAS+GKP+RPTPIG F A+SKERTVVMDSRTI
Sbjct  121  TGDALLGVASLSTHTFTVSRNGEVLRTMPASMGKPTRPTPIGKFTALSKERTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPLNS +GYL+TA YAVRVTWSGVYVHSAPWSVNSQGY NVSHGCINLSPD+A WYF+ 
Sbjct  181  GIPLNSPEGYLITAQYAVRVTWSGVYVHSAPWSVNSQGYTNVSHGCINLSPDDATWYFNT  240

Query  241  VTVGDPIEVVG  251
            V VGDPIEVV 
Sbjct  241  VNVGDPIEVVA  251


>gi|296167284|ref|ZP_06849687.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897384|gb|EFG76987.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=251

 Score =  369 bits (948),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 193/250 (78%), Positives = 218/250 (88%), Gaps = 0/250 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRR VRYL V+VAIT M    S + A A++P  QP+P VASV PANGAVVGVAHPVVVTF
Sbjct  1    MRRGVRYLFVMVAITAMGLVASPARAHASLPLPQPVPAVASVLPANGAVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            T PV DR AVERSIR+++P NT GHFEW+  +VV+WVP+RYWP HT VSVG+Q LT GF+
Sbjct  61   TAPVGDRAAVERSIRVTSPSNTPGHFEWIKDDVVQWVPNRYWPAHTHVSVGIQALTTGFD  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDAL+GVASISAHTFTVSRNGEVLRTMPAS+GKPSRPTPIG+F A+ K+RTVVMDSRTI
Sbjct  121  TGDALLGVASISAHTFTVSRNGEVLRTMPASMGKPSRPTPIGNFTALEKQRTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPL+S +GY +TA YAVRVTWSGVYVHSAPWSV+SQGYANVSHGCINLSPDNAAWYF+ 
Sbjct  181  GIPLSSPEGYKITASYAVRVTWSGVYVHSAPWSVDSQGYANVSHGCINLSPDNAAWYFNQ  240

Query  241  VTVGDPIEVV  250
            V VGDPI+VV
Sbjct  241  VNVGDPIQVV  250


>gi|41409618|ref|NP_962454.1| hypothetical protein MAP3520c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398449|gb|AAS06070.1| hypothetical protein MAP_3520c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=252

 Score =  368 bits (944),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 184/251 (74%), Positives = 208/251 (83%), Gaps = 1/251 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRR  RYL V+VAIT+M     V    A+VP  QP+PG+AS+ PANGAVVGVAHP+VVTF
Sbjct  1    MRRAGRYLFVMVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASN-VVRWVPHRYWPPHTRVSVGVQELTEGF  119
            T P  DR AVERSI + +P    GHFEW   N VVR+VP+RYWP H  VSVGVQ LT GF
Sbjct  61   TAPAADRAAVERSIHVVSPAGVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGF  120

Query  120  ETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRT  179
            +TGDAL+GVASIS HTFTVSRNGEVLRTMPAS+GKPSRPTPIG+F A+ K+R+VVMDSRT
Sbjct  121  DTGDALLGVASISKHTFTVSRNGEVLRTMPASMGKPSRPTPIGNFTALEKQRSVVMDSRT  180

Query  180  IGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFD  239
            IGIPL+S +GY +TA YAVRVTWSGVYVHSAPWSV+SQGYANVSHG INLSPDNAAWYF+
Sbjct  181  IGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDNAAWYFN  240

Query  240  AVTVGDPIEVV  250
             V VGDPI+VV
Sbjct  241  EVNVGDPIQVV  251


>gi|118467140|ref|YP_884310.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium avium 104]
 gi|118168427|gb|ABK69324.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium avium 104]
Length=242

 Score =  359 bits (922),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 178/241 (74%), Positives = 202/241 (84%), Gaps = 1/241 (0%)

Query  11   VVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTDRRAV  70
            +VAIT+M     V    A+VP  QP+PG+AS+ PANGAVVGVAHP+VVTFT P  DR AV
Sbjct  1    MVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTFTAPAADRAAV  60

Query  71   ERSIRISTPHNTTGHFEWVASN-VVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVA  129
            ERSI + +P    GHFEW   N VVR+VP+RYWP H  VSVGVQ LT GF+TGDAL+GVA
Sbjct  61   ERSIHVVSPAGVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGFDTGDALLGVA  120

Query  130  SISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDG  189
            SIS HTFTVSRNGEVLRTMPAS+GKPSRPTPIG+F A+ K+R+VVMDSRTIGIPL+S +G
Sbjct  121  SISKHTFTVSRNGEVLRTMPASMGKPSRPTPIGNFTALEKQRSVVMDSRTIGIPLSSPEG  180

Query  190  YLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            Y +TA YAVRVTWSGVYVHSAPWSV+SQGYANVSHGCINLSPDNAAWYF+ V VGDPI+V
Sbjct  181  YKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGCINLSPDNAAWYFNEVNVGDPIQV  240

Query  250  V  250
            V
Sbjct  241  V  241


>gi|254822802|ref|ZP_05227803.1| hypothetical protein MintA_22924 [Mycobacterium intracellulare 
ATCC 13950]
Length=251

 Score =  357 bits (916),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 188/250 (76%), Positives = 214/250 (86%), Gaps = 0/250 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRR VRYL V+VAIT+M    S +  +AAVP     P VAS+ PA+GAVVGVAHPVVVTF
Sbjct  1    MRRGVRYLFVMVAITVMGLVGSAARGSAAVPTPHAAPEVASILPADGAVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            T PV DR AVERSIR+++P  T GHFEWV ++VV+WVP +YW PHT VSVGVQ LT GF+
Sbjct  61   TAPVADRAAVERSIRVTSPGGTPGHFEWVHNSVVQWVPDQYWAPHTHVSVGVQALTTGFD  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDAL+GVASIS HTFTVSR+GEVLRTMPAS+GKPSRPTP+GSF A+ K+RTVVMDSRTI
Sbjct  121  TGDALLGVASISKHTFTVSRDGEVLRTMPASMGKPSRPTPMGSFTALEKQRTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPL+S +GY +TA YAVRVTWSGVYVHSAPWSV+SQGYANVSHGCINLSPDNAAWYF+ 
Sbjct  181  GIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGCINLSPDNAAWYFNQ  240

Query  241  VTVGDPIEVV  250
            V VGDPI+VV
Sbjct  241  VNVGDPIQVV  250


>gi|336459945|gb|EGO38857.1| hypothetical protein MAPs_45880 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=242

 Score =  357 bits (915),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 177/241 (74%), Positives = 201/241 (84%), Gaps = 1/241 (0%)

Query  11   VVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTDRRAV  70
            +VAIT+M     V    A+VP  QP+PG+AS+ PANGAVVGVAHP+VVTFT P  DR AV
Sbjct  1    MVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTFTAPAADRAAV  60

Query  71   ERSIRISTPHNTTGHFEWVASN-VVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVA  129
            ERSI + +P    GHFEW   N VVR+VP+RYWP H  VSVGVQ LT GF+TGDAL+GVA
Sbjct  61   ERSIHVVSPAGVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGFDTGDALLGVA  120

Query  130  SISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDG  189
            SIS  TFTVSRNGEVLRTMPAS+GKPSRPTPIG+F A+ K+R+VVMDSRTIGIPL+S +G
Sbjct  121  SISKRTFTVSRNGEVLRTMPASMGKPSRPTPIGNFTALEKQRSVVMDSRTIGIPLSSPEG  180

Query  190  YLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            Y +TA YAVRVTWSGVYVHSAPWSV+SQGYANVSHGCINLSPDNAAWYF+ V VGDPI+V
Sbjct  181  YKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGCINLSPDNAAWYFNEVNVGDPIQV  240

Query  250  V  250
            V
Sbjct  241  V  241


>gi|342859471|ref|ZP_08716125.1| hypothetical protein MCOL_11343 [Mycobacterium colombiense CECT 
3035]
 gi|342133712|gb|EGT86915.1| hypothetical protein MCOL_11343 [Mycobacterium colombiense CECT 
3035]
Length=251

 Score =  347 bits (889),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 185/250 (74%), Positives = 209/250 (84%), Gaps = 0/250 (0%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MRR VRYL V+VAIT +     V  ++AAVP   P P VAS+ PA G VVGVAHPVVVTF
Sbjct  1    MRRGVRYLFVMVAITAVGLVAPVGRSSAAVPLPHPGPEVASILPAAGDVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            T PV DR A ERSI +++P  T GHF+WV  NVV+WVP++YWP HT VSVGVQ LT GF+
Sbjct  61   TAPVVDRAAAERSIHVTSPSGTPGHFQWVQDNVVQWVPNQYWPAHTHVSVGVQALTTGFD  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TGDAL+GVASIS HTFTVSR+GEVLRTMPAS+GKPSRPTPIGSF A+ K+RTVVMDSRTI
Sbjct  121  TGDALLGVASISKHTFTVSRDGEVLRTMPASMGKPSRPTPIGSFTALEKQRTVVMDSRTI  180

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPL+S +GY +TA YAVRVTWSGVYVHSAPWSV+SQG ANVSHGCINLSPDNAAWYF+ 
Sbjct  181  GIPLSSPEGYKITASYAVRVTWSGVYVHSAPWSVDSQGNANVSHGCINLSPDNAAWYFNE  240

Query  241  VTVGDPIEVV  250
            V VGDPI+VV
Sbjct  241  VNVGDPIQVV  250


>gi|333992827|ref|YP_004525441.1| hypothetical protein JDM601_4187 [Mycobacterium sp. JDM601]
 gi|333488795|gb|AEF38187.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=247

 Score =  300 bits (769),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 149/240 (63%), Positives = 178/240 (75%), Gaps = 8/240 (3%)

Query  17   MLTAESVSIATAAVPPLQPIPG--VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSI  74
            ++   S  I  AA   +QP PG  VA++ PA G+VVGVA+PV+VTFT PV+DR   ER I
Sbjct  7    LVMGASTGIGQAA-QAVQPTPGFAVAAIEPAAGSVVGVAYPVIVTFTGPVSDRVGAERGI  65

Query  75   RISTPHNT-----TGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVA  129
             I+    T     +GHFEWV+ +VV WVP  YW PH+ + V    ++ GFETGDA++G+A
Sbjct  66   HIAVTGKTASGMPSGHFEWVSDDVVHWVPDGYWSPHSTIEVDAHGMSTGFETGDAVLGLA  125

Query  130  SISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDG  189
             IS HTFTVS NG+ LR M AS+GKP RPTPIGSF A+SKERTV  DSRTIGIPLN  +G
Sbjct  126  DISDHTFTVSVNGDTLRVMAASMGKPKRPTPIGSFTALSKERTVKFDSRTIGIPLNDPEG  185

Query  190  YLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            YL+   Y VRVTWSGVYVHSAPWSV SQGY+NVSHGCINLSPD+AAWYF+ V +GDPI V
Sbjct  186  YLINGEYGVRVTWSGVYVHSAPWSVGSQGYSNVSHGCINLSPDDAAWYFNTVRLGDPIVV  245


>gi|118473165|ref|YP_887832.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium smegmatis str. 
MC2 155]
 gi|118174452|gb|ABK75348.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium smegmatis str. 
MC2 155]
Length=259

 Score =  288 bits (736),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 146/243 (61%), Positives = 178/243 (74%), Gaps = 5/243 (2%)

Query  8    LSVVVAITLMLTAESVSIATAAVP-PLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTD  66
            L   V + +  TA  V++A+AAV  P++    VA V PA GAVVGVAHPV V F  PVTD
Sbjct  19   LFAAVGLAVAATAVPVNVASAAVSTPVE----VAQVEPAAGAVVGVAHPVTVRFAEPVTD  74

Query  67   RRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALI  126
            RR+ ERS+RI++   + G F W  + V+ W P  +WP H+ +S+ V  +   F TG  ++
Sbjct  75   RRSAERSLRIASTDTSAGRFRWPEAAVMEWTPDEFWPAHSTISLSVGGVKTSFNTGAEVL  134

Query  127  GVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNS  186
            GVA I AHTFTVS +GEVLR MPAS+GKP  PTP G+F A++KE  VVMDSRTIGIPL+ 
Sbjct  135  GVADIDAHTFTVSVDGEVLRKMPASMGKPKFPTPRGTFTALAKEPVVVMDSRTIGIPLSD  194

Query  187  SDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDP  246
             +GY LT ++AVRVTW GVYVHSAPWSV SQGYANVSHGCINLSPDNAAWY+D V+VGDP
Sbjct  195  PEGYKLTVNHAVRVTWGGVYVHSAPWSVGSQGYANVSHGCINLSPDNAAWYYDMVSVGDP  254

Query  247  IEV  249
            I V
Sbjct  255  IIV  257


>gi|169630247|ref|YP_001703896.1| hypothetical protein MAB_3165c [Mycobacterium abscessus ATCC 
19977]
 gi|169242214|emb|CAM63242.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=248

 Score =  268 bits (685),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 128/213 (61%), Positives = 154/213 (73%), Gaps = 3/213 (1%)

Query  38   GVASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWV  97
            GVASVSP  G  VGVA PV + F  PV DR A ERSI  S P    G F WV +  VR+ 
Sbjct  32   GVASVSPTPGQTVGVAMPVTIRFAAPVADRIAAERSIEFSAPKVPAGAFSWVDNATVRFT  91

Query  98   PHRYWPPHTRVSV---GVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGK  154
            P  YWP H+ ++V   GV  +   F+TG  ++G+ SIS HTFTV  +G V+RTMPAS+GK
Sbjct  92   PREYWPAHSSITVSVNGVSGMKYKFQTGSEVLGIGSISGHTFTVKIDGTVMRTMPASMGK  151

Query  155  PSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSV  214
            P  PTP+GSF A+ K+  VVMDSRTIGIPLN  +GY LT +YAVRVTW GVYVHSAPWS 
Sbjct  152  PKHPTPVGSFTALEKQSPVVMDSRTIGIPLNDPEGYKLTVYYAVRVTWGGVYVHSAPWST  211

Query  215  NSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
             +QG +NVSHGCINLSPDNA+WY++ V++GDPI
Sbjct  212  GAQGNSNVSHGCINLSPDNASWYYNTVSIGDPI  244


>gi|145223885|ref|YP_001134563.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium gilvum PYR-GCK]
 gi|315444214|ref|YP_004077093.1| hypothetical protein Mspyr1_26260 [Mycobacterium sp. Spyr1]
 gi|145216371|gb|ABP45775.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium gilvum PYR-GCK]
 gi|315262517|gb|ADT99258.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=263

 Score =  268 bits (685),  Expect = 6e-70, Method: Compositional matrix adjust.
 Identities = 134/216 (63%), Positives = 158/216 (74%), Gaps = 5/216 (2%)

Query  38   GVASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTT----GHFEWVASNV  93
            GVA+VSP  G  VGVAHPV VTFT PV DR A E SI ++ P  T+    G   W+    
Sbjct  47   GVATVSPGPGQTVGVAHPVTVTFTEPVRDRTAAENSISVA-PAGTSAPMPGTTRWLDGRS  105

Query  94   VRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLG  153
            V+W P  ++P HT ++V V   + GF+TG +++GVA +SA+TFTVS +G V R MPAS+G
Sbjct  106  VQWEPAEFYPAHTPITVSVGGFSTGFQTGSSVVGVADLSAYTFTVSIDGVVAREMPASMG  165

Query  154  KPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWS  213
            KP  PTP GSF A+SKER V  DSRTIGIPL+  +GYL+   Y VRVTW GVYVHSAPWS
Sbjct  166  KPKFPTPTGSFTALSKERNVTFDSRTIGIPLDDEEGYLIKGEYGVRVTWGGVYVHSAPWS  225

Query  214  VNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            V SQGYANVSHGCINLSPDNAAWYFD V+VGDPI V
Sbjct  226  VGSQGYANVSHGCINLSPDNAAWYFDTVSVGDPIIV  261


>gi|119868805|ref|YP_938757.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium sp. KMS]
 gi|119694894|gb|ABL91967.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium sp. KMS]
Length=249

 Score =  259 bits (662),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 126/249 (51%), Positives = 167/249 (68%), Gaps = 3/249 (1%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            +R   R + V+     +    SV+  +AA+      P V S++P  G VVGVA P+ V F
Sbjct  2    LRMFTRSVLVIAGSVAIAMTGSVATGSAAI---STPPAVTSIAPGTGDVVGVAMPLTVRF  58

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
              PV +R A +RS+RI++P+   G F W++ +V++W P  +WP H+ +SVG  +    F 
Sbjct  59   AAPVDNRFAAQRSLRITSPNTPDGEFTWLSDSVMQWTPTGFWPAHSPISVGAGDFMTEFR  118

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TG +++ VA I A+TFTVS + EV+R MPAS+GK   PTP G+F  + KE  VVMDSRTI
Sbjct  119  TGASVVSVADIDAYTFTVSIDDEVVREMPASMGKAKFPTPQGTFRVLGKESVVVMDSRTI  178

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPL+  +GY LT + AVR+TW GVYVH APWS  SQGYANVSHGCINLSPDNA WYF+ 
Sbjct  179  GIPLDDPEGYKLTVYDAVRITWGGVYVHGAPWSTGSQGYANVSHGCINLSPDNADWYFNT  238

Query  241  VTVGDPIEV  249
            V +GDP+ V
Sbjct  239  VGMGDPVIV  247


>gi|126435339|ref|YP_001071030.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium sp. JLS]
 gi|126235139|gb|ABN98539.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium sp. JLS]
Length=246

 Score =  258 bits (660),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 126/241 (53%), Positives = 165/241 (69%), Gaps = 8/241 (3%)

Query  9    SVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTDRR  68
            SV +A+T  +   S +I+T         P V S++P  G VVGVA P+ V F  PV +R 
Sbjct  12   SVAIAMTGSVATGSAAISTP--------PAVTSIAPGTGDVVGVAMPLTVRFAAPVDNRF  63

Query  69   AVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGV  128
            A +RS+RI++P+   G F W++ +V++W P  +WP H+ +SVG  +    F TG +++ V
Sbjct  64   AAQRSLRITSPNTPDGEFTWLSDSVMQWTPTGFWPAHSPISVGAGDFMTEFRTGASVVSV  123

Query  129  ASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSD  188
            A I A+TFTVS + EV+R MPAS+GK   PTP G+F  + KE  VVMDSRTIGIPL+  +
Sbjct  124  ADIDAYTFTVSIDDEVVREMPASMGKAKFPTPQGTFRVLGKESVVVMDSRTIGIPLDDPE  183

Query  189  GYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIE  248
            GY LT + AVR+TW GVYVH APWS  SQGYANVSHGCINLSPDNA WYF+ V +GDP+ 
Sbjct  184  GYKLTVYDAVRITWGGVYVHGAPWSTGSQGYANVSHGCINLSPDNADWYFNTVGMGDPVI  243

Query  249  V  249
            V
Sbjct  244  V  244


>gi|108799695|ref|YP_639892.1| ErfK/YbiS/YcfS/YnhG [Mycobacterium sp. MCS]
 gi|108770114|gb|ABG08836.1| ErfK/YbiS/YcfS/YnhG [Mycobacterium sp. MCS]
Length=280

 Score =  258 bits (659),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 126/249 (51%), Positives = 167/249 (68%), Gaps = 3/249 (1%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            +R   R + V+     +    SV+  +AA+      P V S++P  G VVGVA P+ V F
Sbjct  33   LRMFTRSVLVIAGSVAIAMTGSVATGSAAI---STPPAVTSIAPGTGDVVGVAMPLTVRF  89

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
              PV +R A +RS+RI++P+   G F W++ +V++W P  +WP H+ +SVG  +    F 
Sbjct  90   AAPVDNRFAAQRSLRITSPNTPDGEFTWLSDSVMQWTPTGFWPAHSPISVGAGDFMTEFR  149

Query  121  TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI  180
            TG +++ VA I A+TFTVS + EV+R MPAS+GK   PTP G+F  + KE  VVMDSRTI
Sbjct  150  TGASVVSVADIDAYTFTVSIDDEVVREMPASMGKAKFPTPQGTFRVLGKESVVVMDSRTI  209

Query  181  GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA  240
            GIPL+  +GY LT + AVR+TW GVYVH APWS  SQGYANVSHGCINLSPDNA WYF+ 
Sbjct  210  GIPLDDPEGYKLTVYDAVRITWGGVYVHGAPWSTGSQGYANVSHGCINLSPDNADWYFNT  269

Query  241  VTVGDPIEV  249
            V +GDP+ V
Sbjct  270  VGMGDPVIV  278


>gi|315441559|ref|YP_004074436.1| hypothetical protein Mspyr1_54420 [Mycobacterium sp. Spyr1]
 gi|315265214|gb|ADU01955.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=217

 Score =  258 bits (658),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 122/209 (59%), Positives = 149/209 (72%), Gaps = 0/209 (0%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVP  98
            VA V P  G VVGV HPV+V F+ PV DR A ERSI +  P    G F W+   +V W P
Sbjct  5    VAMVRPGPGQVVGVGHPVLVGFSGPVDDRAAAERSITVGAPRPVDGEFTWLTDRLVEWNP  64

Query  99   HRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRP  158
              +WP H+ V++ V  +   F TG A++GVA +SAHTFTV  + +V+R MPASLGKP   
Sbjct  65   DGFWPAHSTVTLRVGGMKTEFTTGAAVVGVADVSAHTFTVKIDDQVVREMPASLGKPGFE  124

Query  159  TPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQG  218
            TP+G+F  + K+R+VV DSRTIGIPL+  +GYL+   YAVRVTW GVYVHSAPWSV SQG
Sbjct  125  TPLGTFKVLEKQRSVVFDSRTIGIPLDDPEGYLIDGEYAVRVTWGGVYVHSAPWSVGSQG  184

Query  219  YANVSHGCINLSPDNAAWYFDAVTVGDPI  247
             ANVSHGCINLSP+NA WYF+ V VGDP+
Sbjct  185  SANVSHGCINLSPENAEWYFNTVKVGDPV  213


>gi|126437084|ref|YP_001072775.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium sp. JLS]
 gi|126236884|gb|ABO00285.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family 
[Mycobacterium sp. JLS]
Length=256

 Score =  256 bits (655),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 122/211 (58%), Positives = 151/211 (72%), Gaps = 0/211 (0%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVP  98
            VA V P   AVVGV HPV+V ++ PV DR A ERSI ++      G F W+   +V W P
Sbjct  44   VAMVRPGPDAVVGVGHPVLVGYSEPVEDRAAAERSITVTASQPMEGEFTWLNDRLVEWTP  103

Query  99   HRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRP  158
              +WP H+ V+V V  L   F TG A++GVA IS++TFTVS +G+V+R MPAS+GKP   
Sbjct  104  DGFWPAHSTVTVRVGGLKTDFTTGAAVVGVADISSYTFTVSIDGQVVREMPASMGKPGFD  163

Query  159  TPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQG  218
            TP+G+F  + K+R VV DSRTIGIPL+  +GYL+   Y VRVTW GVY+HSAPWSV SQG
Sbjct  164  TPVGTFKVLEKQRNVVFDSRTIGIPLDDPEGYLIDGEYGVRVTWGGVYIHSAPWSVASQG  223

Query  219  YANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
             ANVSHGCINLSP+NA WYF+ VTVGDP+ V
Sbjct  224  SANVSHGCINLSPENAEWYFNTVTVGDPVIV  254


>gi|240173371|ref|ZP_04752029.1| hypothetical protein MkanA1_28921 [Mycobacterium kansasii ATCC 
12478]
Length=284

 Score =  252 bits (644),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 131/268 (49%), Positives = 175/268 (66%), Gaps = 19/268 (7%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MR  +R L VV++IT+ + A    +   AV       G+A+V P  GAVVGVAHPVV+TF
Sbjct  1    MRAAIRSLLVVISITVTVFAGRTGVTLMAVNSAGDSVGIAAVLPMRGAVVGVAHPVVITF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
              PV DR+AVER+I + +    TG FEW+  NVV+WVP R+WP H+ V++ V  L   FE
Sbjct  61   GHPVADRQAVERAIDVRSAPARTGKFEWLDDNVVQWVPDRFWPAHSTVALSVGGLRTNFE  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLRT-------------------MPASLGKPSRPTPI  161
            TG A++GVA I+ HTFTVS +G    T                   +PAS+G+P   TP+
Sbjct  121  TGPAVVGVADIAKHTFTVSIDGVPAGTGAPPLPTPHHRPHWGEEGVLPASMGRPEFETPV  180

Query  162  GSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYAN  221
            G++H +SK+RTV+MDS ++GIP++  DGY L   YAVR+T  G+YVHSAPW++ S G  N
Sbjct  181  GTYHVISKDRTVIMDSSSVGIPVDDPDGYRLPVDYAVRITSRGLYVHSAPWAIRSMGVEN  240

Query  222  VSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            VSHGCI+LSP +A WYF+ V VGDP+ V
Sbjct  241  VSHGCISLSPTDAEWYFNTVNVGDPVIV  268


>gi|120403999|ref|YP_953828.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium vanbaalenii 
PYR-1]
 gi|119956817|gb|ABM13822.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium vanbaalenii 
PYR-1]
Length=266

 Score =  246 bits (629),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 125/209 (60%), Positives = 141/209 (68%), Gaps = 3/209 (1%)

Query  44   PANGAVVGVAHPVVVTFTTPVTDRRAVERSIRI---STPHNTTGHFEWVASNVVRWVPHR  100
            PA G  VGVAHPV VTF   V DR A ER++ +          G F W+   VV W P +
Sbjct  56   PAPGETVGVAHPVTVTFAGQVPDRAAAERAVNVVPAGASAPAAGSFTWLDDRVVEWTPAQ  115

Query  101  YWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTP  160
              P HT + V V     GFETG +++ VA IS HTFTVS +G V R MPAS+GKP  PTP
Sbjct  116  PLPAHTAIGVSVGAFATGFETGASVVSVADISEHTFTVSIDGVVARQMPASMGKPRYPTP  175

Query  161  IGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYA  220
             G F A+ K+R V  DSRTIGIPL+  +GYL+   Y VRVTW GVYVHSAPWSV SQGYA
Sbjct  176  TGQFTALEKQRYVTFDSRTIGIPLDDPEGYLIKGEYGVRVTWGGVYVHSAPWSVGSQGYA  235

Query  221  NVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            NVSHGCINLSPDNAAWYFD V VGDPI V
Sbjct  236  NVSHGCINLSPDNAAWYFDTVGVGDPIIV  264


>gi|317507840|ref|ZP_07965541.1| ykud domain-containing protein [Segniliparus rugosus ATCC BAA-974]
 gi|316253882|gb|EFV13251.1| ykud domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length=254

 Score =  246 bits (629),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 119/210 (57%), Positives = 148/210 (71%), Gaps = 0/210 (0%)

Query  38   GVASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWV  97
            GV SVSPA G  VGVA PV + F  PV DR A ++++  S  +   G F W     +RW 
Sbjct  41   GVVSVSPAEGETVGVAAPVTIRFAGPVADRAAAQQAVGFSASNVPDGAFSWPDDATMRWT  100

Query  98   PHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSR  157
            P  YWP H+ V+V        F TG  ++G+ASIS HTFTV  +G+V++TMPAS+G+P  
Sbjct  101  PSGYWPSHSTVTVVAAGYPHKFRTGAEVVGIASISQHTFTVKIDGKVVKTMPASMGRPKH  160

Query  158  PTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQ  217
            PTP+GSF  + K+  VVMDSRTIGIPLNS +GY LT + AVRVTW GVYVH+APWSV SQ
Sbjct  161  PTPVGSFTTLEKQNPVVMDSRTIGIPLNSPEGYKLTVYNAVRVTWGGVYVHAAPWSVASQ  220

Query  218  GYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            G ANVSHGCINLS +NAAWY++ V +GDP+
Sbjct  221  GKANVSHGCINLSSENAAWYYNTVGIGDPV  250


>gi|296392896|ref|YP_003657780.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM 
44985]
 gi|296180043|gb|ADG96949.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM 
44985]
Length=257

 Score =  239 bits (610),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 123/211 (59%), Positives = 148/211 (71%), Gaps = 2/211 (0%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRIST--PHNTTGHFEWVASNVVRW  96
            V SVSPA G  VGVA PV V F  PV DR A ++S+  ST  PH   G F W+    +RW
Sbjct  43   VVSVSPAEGETVGVAFPVTVRFAAPVADRAAAQQSVTFSTSGPHTPEGSFRWLDDATMRW  102

Query  97   VPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPS  156
             P  YWP H  V+V        F TG  ++ VASISAHTFTV  +G+V++TMPAS+G+P 
Sbjct  103  TPTGYWPSHETVTVVAAGFPRKFRTGAQVLAVASISAHTFTVKIDGKVVKTMPASMGRPK  162

Query  157  RPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNS  216
             PTP+GSF  + K+  VVMDSRTIGIPLNS +GY LT + AVR+TW GVYVH+APWS  S
Sbjct  163  HPTPVGSFTTLEKQNPVVMDSRTIGIPLNSPEGYKLTVYDAVRLTWGGVYVHAAPWSAAS  222

Query  217  QGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            QG ANVSHGCINLS DNAAWY++ V +GDP+
Sbjct  223  QGKANVSHGCINLSTDNAAWYYNTVGIGDPV  253


>gi|41409910|ref|NP_962746.1| hypothetical protein MAP3812c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398743|gb|AAS06362.1| hypothetical protein MAP_3812c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336460225|gb|EGO39128.1| hypothetical protein MAPs_42530 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=271

 Score =  236 bits (603),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 131/272 (49%), Positives = 177/272 (66%), Gaps = 26/272 (9%)

Query  1    MRRVVRYL--SVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVV  58
            MR  VR +  +V VA  +++T   VS+A A          +ASV P++G +VGVAHPVVV
Sbjct  1    MRTGVRCVLATVGVAACVVVTPAGVSLAAAT---QSHAFAIASVLPSSGEMVGVAHPVVV  57

Query  59   TFTTPVTD---RRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQEL  115
            TF  P+TD   R A E++I + +    +G FEW+ + VV+WVP RYWP H+ +++ V  +
Sbjct  58   TFRAPITDPAKRHAAEQTIDVKSTPAMSGKFEWLDNRVVQWVPDRYWPAHSTIALTVGGV  117

Query  116  TEGFETGDALIGVASISAHTFTVSRNG------------------EVLRTMPASLGKPSR  157
            +   +TG A+IGVASIS HTFTVS +G                       MPAS+G+P  
Sbjct  118  STEIKTGPAVIGVASISEHTFTVSIDGVEAGPPTSLPAPHHRPHFGEQGVMPASMGRPEF  177

Query  158  PTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQ  217
            PTP+GS+  +SKER V MDS ++GIP++  DGYLLT +YAVR+T  G++VHSAPW+V S 
Sbjct  178  PTPVGSYTVLSKERAVTMDSSSVGIPVDDPDGYLLTVNYAVRITNRGLFVHSAPWAVRSL  237

Query  218  GYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            G  NVSHGCI+LSPD+A WY+D V VGDP+ V
Sbjct  238  GLENVSHGCISLSPDDAEWYYDHVNVGDPVIV  269


>gi|296167732|ref|ZP_06849949.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897075|gb|EFG76690.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=247

 Score =  233 bits (593),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 116/226 (52%), Positives = 157/226 (70%), Gaps = 15/226 (6%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVP  98
            +ASV PA GA VGVAHPVVVTFT PV +RRA E +I I++    TG FEW+ +NVV+WVP
Sbjct  12   IASVLPARGATVGVAHPVVVTFTAPVANRRAAEHTIGITSSPAMTGKFEWLDNNVVQWVP  71

Query  99   HRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRT-----------  147
              YWP H+ V++ V   +  F+TG  +IGVA+I+ HTF V+ +G                
Sbjct  72   SHYWPAHSTVALAVDGRSTEFKTGPKVIGVANITDHTFKVTVDGVDAAPPPTPHHRPHFG  131

Query  148  ----MPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWS  203
                +PAS+G+P  PTP+G++  +SKER+V+MDS ++GIP++  +GYLL   YAVR+T  
Sbjct  132  EEGVLPASMGRPEFPTPVGNYTVLSKERSVLMDSSSVGIPVDDPNGYLLNVDYAVRITNR  191

Query  204  GVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            G++VHSAPW+V S G  NVSHGCI+LSPD+A WY++ V VGDP+ V
Sbjct  192  GLFVHSAPWAVPSLGLENVSHGCISLSPDDAEWYYNTVNVGDPVIV  237


>gi|342859186|ref|ZP_08715840.1| hypothetical protein MCOL_09918 [Mycobacterium colombiense CECT 
3035]
 gi|342133427|gb|EGT86630.1| hypothetical protein MCOL_09918 [Mycobacterium colombiense CECT 
3035]
Length=271

 Score =  233 bits (593),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 124/268 (47%), Positives = 167/268 (63%), Gaps = 22/268 (8%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MR  VR +  V+     + A    ++ AA         +AS+SP    VVGVAHP+ V F
Sbjct  1    MRTGVRCVLAVIGAAASVVATPAGVSLAAANQSHGF-AIASISPGRDEVVGVAHPIQVKF  59

Query  61   TTPVT---DRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTE  117
            T PVT   DRRA ER++ + +    TG FEW+ + VV+WVP RYWP H+ +++ V   + 
Sbjct  60   TAPVTNSADRRAAERAVDVKSTPAMTGKFEWLDNKVVQWVPDRYWPAHSTIALTVGGASA  119

Query  118  GFETGDALIGVASISAHTFTVSRNGEVLR------------------TMPASLGKPSRPT  159
              +TG A+IGVASIS HTFTVS +G                       MPAS+G+P  PT
Sbjct  120  EIKTGPAVIGVASISEHTFTVSIDGAEAGPPTSLPAPHHRPHFGEQGVMPASMGRPEYPT  179

Query  160  PIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGY  219
            P+GS+  +SKE  V MDS ++GIP++  +GYLLT +YAVR+T  G++VHSAPW+V + G 
Sbjct  180  PVGSYTVLSKEEAVTMDSSSVGIPVDDPNGYLLTVNYAVRITSRGLFVHSAPWAVPALGL  239

Query  220  ANVSHGCINLSPDNAAWYFDAVTVGDPI  247
             NVSHGCI+LSPD+A WY+D V VGDP+
Sbjct  240  ENVSHGCISLSPDDAEWYYDHVHVGDPV  267


>gi|226360070|ref|YP_002777848.1| hypothetical protein ROP_06560 [Rhodococcus opacus B4]
 gi|226238555|dbj|BAH48903.1| hypothetical protein [Rhodococcus opacus B4]
Length=253

 Score =  233 bits (593),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 102/209 (49%), Positives = 145/209 (70%), Gaps = 0/209 (0%)

Query  41   SVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHR  100
            +++PA+G VVG+AHPVVV FT+PV DR   ER +RI+      G F W+    ++W P R
Sbjct  43   ALTPASGQVVGIAHPVVVRFTSPVPDRALAERGVRITPSTPVPGQFSWIDDRTLQWNPDR  102

Query  101  YWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTP  160
            +WP +T V+V        F+ GDAL+ VA+ + H FTVS N ++++TMPAS+GKP   TP
Sbjct  103  FWPANTAVTVEAAGARSQFQVGDALVAVANTTTHQFTVSINDQIVQTMPASMGKPGYETP  162

Query  161  IGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYA  220
            +G+F  + + R ++MDS T G+P++  +GY L   YA R+TW G++VH+APWSV SQG+ 
Sbjct  163  LGTFPVIEQFRDMIMDSSTYGVPIDDEEGYRLYVEYATRITWGGIFVHAAPWSVGSQGFE  222

Query  221  NVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            NVSHGCINLS +NA W++D   +GDP+ V
Sbjct  223  NVSHGCINLSTENARWFYDNAKIGDPVIV  251


>gi|54025398|ref|YP_119640.1| hypothetical protein nfa34280 [Nocardia farcinica IFM 10152]
 gi|54016906|dbj|BAD58276.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=253

 Score =  231 bits (589),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 109/206 (53%), Positives = 143/206 (70%), Gaps = 0/206 (0%)

Query  44   PANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWP  103
            P++G +VG+AHPV V FT PVTDR  VER++R+       G   W     + W P    P
Sbjct  46   PSDGRMVGIAHPVTVEFTQPVTDRARVERAVRVEAAAPLPGTVAWTGDRTLTWTPSAPLP  105

Query  104  PHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGS  163
              + ++V   ++   F T   +   A +SAHTFTVS  G+V+RTMPAS+GKP   TP G+
Sbjct  106  ADSTITVRAGDVRTEFRTNAGVYAEADLSAHTFTVSIGGQVVRTMPASMGKPGFETPTGT  165

Query  164  FHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVS  223
            F  + K R++V DSRTIGIPL+S +GYL+   YAVR+TW GV+VHSAPWSV+SQGYANVS
Sbjct  166  FPVLEKFRSIVFDSRTIGIPLSSPEGYLIDGEYAVRLTWGGVFVHSAPWSVDSQGYANVS  225

Query  224  HGCINLSPDNAAWYFDAVTVGDPIEV  249
            HGCINLSPD+AAWY++ V +GDP+ +
Sbjct  226  HGCINLSPDDAAWYYNTVGIGDPVYI  251


>gi|254821522|ref|ZP_05226523.1| hypothetical protein MintA_16430 [Mycobacterium intracellulare 
ATCC 13950]
Length=268

 Score =  221 bits (563),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 122/229 (54%), Positives = 157/229 (69%), Gaps = 18/229 (7%)

Query  37   PGVASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRW  96
            P +ASVSPA G VVGVAHPVVVTF  PVTDR A ER++ + +    TG FEW+ + VV+W
Sbjct  36   PAIASVSPARGEVVGVAHPVVVTFRGPVTDRSAAERAVEVKSTPAMTGKFEWLDNKVVQW  95

Query  97   VPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLR----------  146
            VP RYWP H+ +++ V + T   +TG A+IGVASIS HTFTVS +G              
Sbjct  96   VPDRYWPAHSTIALTVGQATSEIKTGPAVIGVASISQHTFTVSIDGAEAGPPTQLPAPHH  155

Query  147  --------TMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAV  198
                     MPASLG+P   TP+GS+  +SKE  V MDS ++GIP++  +GYLLT +YAV
Sbjct  156  RPHFGEQGVMPASLGRPEYATPVGSYTVLSKEPAVTMDSSSVGIPVDDPNGYLLTVNYAV  215

Query  199  RVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            R+T  G++VHSAPW+V S G  NVSHGCI+LSPD+A WY++ V VGDP+
Sbjct  216  RITNRGLFVHSAPWAVQSLGLENVSHGCISLSPDDAEWYYNHVNVGDPV  264


>gi|111017939|ref|YP_700911.1| lipoprotein [Rhodococcus jostii RHA1]
 gi|110817469|gb|ABG92753.1| possible lipoprotein [Rhodococcus jostii RHA1]
Length=253

 Score =  218 bits (555),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 116/248 (47%), Positives = 160/248 (65%), Gaps = 1/248 (0%)

Query  2    RRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFT  61
            ++V R   V V   L +   S + A+A  P +       ++SPA+G VVGVAHPVVV F 
Sbjct  5    QQVGRLFLVSVLAALAVCGVSAT-ASAHAPAVTGKVVAPTLSPASGHVVGVAHPVVVRFA  63

Query  62   TPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFET  121
            +PV DR   ER +RI+      G F W+    V+W P  +WP HTRV+V        F+ 
Sbjct  64   SPVPDRALAERGVRITPSRAVPGQFSWIDDRTVQWTPAHFWPAHTRVTVEAAGARSQFQV  123

Query  122  GDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIG  181
            GDAL+ VA+ + H FTVS N +V++TMPAS+GKP   TP+G+F  + + R ++MDS T G
Sbjct  124  GDALVAVANTTTHQFTVSINDQVVQTMPASMGKPGYETPLGTFPVIEQFRDMIMDSSTYG  183

Query  182  IPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAV  241
            +P++  +GY L   YA R+TW G++VH+APWSVNSQG+ NVSHGCINLS +NA W++D  
Sbjct  184  VPIDDEEGYRLYVEYATRITWGGIFVHAAPWSVNSQGFENVSHGCINLSTENARWFYDNA  243

Query  242  TVGDPIEV  249
             +GDP+ V
Sbjct  244  KIGDPVIV  251


>gi|315446271|ref|YP_004079150.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family 
[Mycobacterium sp. Spyr1]
 gi|315264574|gb|ADU01316.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family 
[Mycobacterium sp. Spyr1]
Length=276

 Score =  217 bits (553),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 110/227 (49%), Positives = 148/227 (66%), Gaps = 16/227 (7%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVP  98
            + S+ PA GA VGVAHPVV+TF   V +R A E+ +RI++    TG FEWVA NV  WVP
Sbjct  37   IGSLLPAEGATVGVAHPVVITFDNAVVNRFATEQVMRIASDPPMTGTFEWVADNVAHWVP  96

Query  99   HRYWPPHTRVSVGVQEL-TEGFETGDALIGVASISAHTFTVSRNG---------------  142
            + +WP H+ V + + +L T  FE G A++G+A++S HTFTV+ +G               
Sbjct  97   NEFWPAHSTVKLTLGDLPTRTFEIGRAVVGIANLSDHTFTVTIDGVPPSELPAPHHRPYW  156

Query  143  EVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTW  202
             +    PAS+G+P  PTP+G +  ++KER V MDS ++GIP ++ DGYLL   YAVR T 
Sbjct  157  GLHGVFPASMGRPEYPTPVGVYSVLAKERDVTMDSSSVGIPTDAPDGYLLDVDYAVRFTH  216

Query  203  SGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
             G++VHSAPW+VN  G  N SHGCI LS ++A WYF+ V VGDPI V
Sbjct  217  RGLFVHSAPWAVNQMGNENGSHGCIGLSTEDAEWYFNTVNVGDPIVV  263


>gi|254777271|ref|ZP_05218787.1| hypothetical protein MaviaA2_21739 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=271

 Score =  217 bits (552),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 132/272 (49%), Positives = 178/272 (66%), Gaps = 26/272 (9%)

Query  1    MRRVVRYL--SVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVV  58
            MR  VR +  +V VA  +++T   VS+A A+         +ASV P++G VVGVAHPVVV
Sbjct  1    MRTGVRCVLATVGVAACVVVTPAGVSLAAAS---QSHAFAIASVLPSSGEVVGVAHPVVV  57

Query  59   TFTTPVTD---RRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQEL  115
            TF  P+TD   R A E++I + +    +G FEW+ + VV+WVP RYWP H+ +++ V  +
Sbjct  58   TFRAPITDPAKRHAAEQTIDVKSTPAMSGKFEWLDNRVVQWVPDRYWPAHSTIALTVGGV  117

Query  116  TEGFETGDALIGVASISAHTFTVSRNG------------------EVLRTMPASLGKPSR  157
            +   +TG A+IGVASIS HTFTVS +G                       MPAS+G+P  
Sbjct  118  STEIKTGPAVIGVASISEHTFTVSIDGVEAGPPTSLPAPHHRPHFGEQGVMPASMGRPEF  177

Query  158  PTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQ  217
            PTP+GS+  +SKER V MDS ++GIP++  DGYLLT +YAVR+T  G++VHSAPW+V S 
Sbjct  178  PTPVGSYTVLSKERAVTMDSSSVGIPVDDPDGYLLTVNYAVRITNRGLFVHSAPWAVRSL  237

Query  218  GYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            G  NVSHGCI+LSPD+A WY+D V VGDP+ V
Sbjct  238  GLENVSHGCISLSPDDAEWYYDHVNVGDPVIV  269


>gi|145221989|ref|YP_001132667.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium gilvum PYR-GCK]
 gi|145214475|gb|ABP43879.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family 
[Mycobacterium gilvum PYR-GCK]
Length=276

 Score =  216 bits (550),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 110/227 (49%), Positives = 147/227 (65%), Gaps = 16/227 (7%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVP  98
            + S+ PA GA VGVAHPVV+TF   V +R A E+ +RI++    TG FEWVA NV  WVP
Sbjct  37   IGSLLPAEGATVGVAHPVVITFDNAVVNRLATEQVMRIASDPPMTGTFEWVADNVAHWVP  96

Query  99   HRYWPPHTRVSVGVQEL-TEGFETGDALIGVASISAHTFTVSRNG---------------  142
            + +WP H+ V + + +L T  FE G A++G+A++S HTFTV+ +G               
Sbjct  97   NEFWPAHSTVKLTLGDLPTRTFEIGRAVVGIANLSDHTFTVTIDGVPPSELPAPHHRPYW  156

Query  143  EVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTW  202
             +    PAS+G+P  PTP+G +  ++KER V MDS ++GIP ++ DGYLL   YAVR T 
Sbjct  157  GLHGVFPASMGRPEYPTPVGVYSVLAKERDVTMDSSSVGIPTDAPDGYLLDVDYAVRFTH  216

Query  203  SGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
             G++VHSAPW+VN  G  N SHGCI LS  +A WYF+ V VGDPI V
Sbjct  217  RGLFVHSAPWAVNQMGNENGSHGCIGLSTGDAEWYFNTVNVGDPIVV  263


>gi|221229696|ref|YP_002503112.1| hypothetical protein MLBr_00569 [Mycobacterium leprae Br4923]
 gi|219932803|emb|CAR70662.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=271

 Score =  215 bits (547),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 119/267 (45%), Positives = 170/267 (64%), Gaps = 19/267 (7%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MR  +R + VV+ I   + A  V ++ AAV        + S+ P   AVVGVAHPVVVTF
Sbjct  4    MRAAIRGVLVVIGIAATVIAGPVRVSLAAVNHAHGF-AITSILPTRDAVVGVAHPVVVTF  62

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
              PVT+R+A E S+++ +     G F+W+ S VV+WVP RYWP H+ +++ V  L+  F+
Sbjct  63   GAPVTNRKATELSLKVRSAPAMNGKFDWLDSKVVQWVPDRYWPEHSTIALAVGNLSTNFK  122

Query  121  TGDALIGVASISAHTFTVSRNGEVLRT------------------MPASLGKPSRPTPIG  162
            TG A++G+A IS HTFTV+ +G    T                  MPAS+GK   PTP G
Sbjct  123  TGPAILGIADISNHTFTVTIDGVEAETPPPLPSPHHRPHWGEEGVMPASMGKTEFPTPTG  182

Query  163  SFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANV  222
             +  MSK+R+V+MDS ++GIP++  +GY L+  YAVR++  G+Y+HSAPW+V S G+ N 
Sbjct  183  KYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYAVRISSRGLYIHSAPWAVQSMGFDNT  242

Query  223  SHGCINLSPDNAAWYFDAVTVGDPIEV  249
            SHGCI+LSP +A WY++ V +GDP+ V
Sbjct  243  SHGCISLSPADAEWYYNTVNIGDPVIV  269


>gi|15827218|ref|NP_301481.1| hypothetical protein ML0569 [Mycobacterium leprae TN]
 gi|466901|gb|AAA17146.1| B1496_F2_81 [Mycobacterium leprae]
 gi|13092767|emb|CAC30077.1| putative membrane protein [Mycobacterium leprae]
Length=271

 Score =  214 bits (544),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 119/267 (45%), Positives = 170/267 (64%), Gaps = 19/267 (7%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MR  +R + VV+ I   + A  V ++ AAV        + S+ P   AVVGVAHPVVVTF
Sbjct  4    MRAAIRGVLVVIGIAATVIAGPVRVSLAAVNHAHGF-AITSILPTRDAVVGVAHPVVVTF  62

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
              PVT+R+A E S+++ +     G F+W+ S VV+WVP RYWP H+ +++ V  L+  F+
Sbjct  63   GAPVTNRKATELSLKVRSAPAMNGKFDWLDSKVVQWVPDRYWPEHSTIALTVGNLSTNFK  122

Query  121  TGDALIGVASISAHTFTVSRNGEVLRT------------------MPASLGKPSRPTPIG  162
            TG A++G+A IS HTFTV+ +G    T                  MPAS+GK   PTP G
Sbjct  123  TGPAILGIADISNHTFTVTIDGVEAETPPPLPSPHHRPHWGEEGVMPASMGKTEFPTPTG  182

Query  163  SFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANV  222
             +  MSK+R+V+MDS ++GIP++  +GY L+  YAVR++  G+Y+HSAPW+V S G+ N 
Sbjct  183  KYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYAVRISSRGLYIHSAPWAVQSMGFDNT  242

Query  223  SHGCINLSPDNAAWYFDAVTVGDPIEV  249
            SHGCI+LSP +A WY++ V +GDP+ V
Sbjct  243  SHGCISLSPADAEWYYNTVNIGDPVIV  269


>gi|118466895|ref|YP_883958.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium avium 104]
 gi|118168182|gb|ABK69079.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium avium 104]
Length=254

 Score =  214 bits (544),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 119/230 (52%), Positives = 158/230 (69%), Gaps = 21/230 (9%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTD---RRAVERSIRISTPHNTTGHFEWVASNVVR  95
            +ASV P++G VVGVAHPVVVTF  P+TD   R A E++I + +    +G FEW+ + VV+
Sbjct  21   IASVLPSSGEVVGVAHPVVVTFRAPITDPAKRHAAEQTIDVKSTPAMSGKFEWLDNRVVQ  80

Query  96   WVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNG-------------  142
            WVP RYWP H+ +++ V  ++   +TG A+IGVASIS HTFTVS +G             
Sbjct  81   WVPDRYWPAHSTIALTVGGVSTEIKTGPAVIGVASISEHTFTVSIDGVEAGPPTSLPAPH  140

Query  143  -----EVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYA  197
                      MPAS+G+P  PTP+GS+  +SKER V MDS ++GIP++  DGYLLT +YA
Sbjct  141  HRPHFGEQGVMPASMGRPEFPTPVGSYTVLSKERAVTMDSSSVGIPVDDPDGYLLTVNYA  200

Query  198  VRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            VR+T  G++VHSAPW+V S G  NVSHGCI+LSPD+A WY+D V VGDP+
Sbjct  201  VRITNRGLFVHSAPWAVRSLGLENVSHGCISLSPDDAEWYYDHVNVGDPV  250


>gi|183983533|ref|YP_001851824.1| hypothetical protein MMAR_3552 [Mycobacterium marinum M]
 gi|183176859|gb|ACC41969.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=312

 Score =  212 bits (539),  Expect = 5e-53, Method: Compositional matrix adjust.
 Identities = 117/265 (45%), Positives = 170/265 (65%), Gaps = 18/265 (6%)

Query  1    MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF  60
            MR VVR + VV+ I   + A    +  A +   Q    +AS+ P  G VVGVAHPVVVTF
Sbjct  1    MRAVVRSVLVVIGIAAAVVAGPGDVRLAGINRSQGYLSIASLRPTRGEVVGVAHPVVVTF  60

Query  61   TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE  120
            + PV DR A ER+I + +    TG ++W+ +NVV+WVP ++WP H+ V++ V  ++  F+
Sbjct  61   SGPVADRYAAERAIAVKSAPAMTGRYQWLDNNVVQWVPDQFWPAHSTVALSVGGVSSQFK  120

Query  121  TGDALIGVASISAHTFTVSRNGEVLR------------------TMPASLGKPSRPTPIG  162
            TG  ++GVA I+ HTFTV+ +G                       +PAS+G+   PTP+G
Sbjct  121  TGPEVLGVADIANHTFTVTIDGVDAEPPPRLPAPHHRPHWGEDGVLPASMGRSEYPTPVG  180

Query  163  SFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANV  222
            ++  +SK+R+V+MDS ++GIP+++ DGY LT  YAVR+T  G+YVHSAPW+  + G  N+
Sbjct  181  TYTVLSKDRSVIMDSSSVGIPVDAPDGYRLTVDYAVRITGRGLYVHSAPWATQAMGMENI  240

Query  223  SHGCINLSPDNAAWYFDAVTVGDPI  247
            SHGCI+LSP +A WYF+ V VGDP+
Sbjct  241  SHGCISLSPADAEWYFNTVNVGDPV  265


>gi|15608571|ref|NP_215949.1| hypothetical protein Rv1433 [Mycobacterium tuberculosis H37Rv]
 gi|15840890|ref|NP_335927.1| hypothetical protein MT1477 [Mycobacterium tuberculosis CDC1551]
 gi|31792627|ref|NP_855120.1| hypothetical protein Mb1468 [Mycobacterium bovis AF2122/97]
 49 more sequence titles
 gi|148661224|ref|YP_001282747.1| hypothetical protein MRA_1442 [Mycobacterium tuberculosis H37Ra]
 gi|148822653|ref|YP_001287407.1| hypothetical protein TBFG_11462 [Mycobacterium tuberculosis F11]
 gi|167968471|ref|ZP_02550748.1| hypothetical protein MtubH3_10731 [Mycobacterium tuberculosis 
H37Ra]
 gi|253799517|ref|YP_003032518.1| hypothetical protein TBMG_02548 [Mycobacterium tuberculosis KZN 
1435]
 gi|254231672|ref|ZP_04924999.1| hypothetical exported protein [Mycobacterium tuberculosis C]
 gi|254364313|ref|ZP_04980359.1| hypothetical exported protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254550447|ref|ZP_05140894.1| hypothetical protein Mtube_08292 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289442878|ref|ZP_06432622.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
 gi|289447030|ref|ZP_06436774.1| hypothetical exported protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554777|ref|ZP_06443987.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 
605]
 gi|289569453|ref|ZP_06449680.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
 gi|289574102|ref|ZP_06454329.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745184|ref|ZP_06504562.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289753515|ref|ZP_06512893.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757541|ref|ZP_06516919.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761592|ref|ZP_06520970.1| hypothetical exported protein [Mycobacterium tuberculosis GM 
1503]
 gi|294994994|ref|ZP_06800685.1| hypothetical protein Mtub2_10905 [Mycobacterium tuberculosis 
210]
 gi|297633989|ref|ZP_06951769.1| hypothetical protein MtubK4_07697 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297730978|ref|ZP_06960096.1| hypothetical protein MtubKR_07797 [Mycobacterium tuberculosis 
KZN R506]
 gi|298524939|ref|ZP_07012348.1| hypothetical exported protein [Mycobacterium tuberculosis 94_M4241A]
 gi|307084002|ref|ZP_07493115.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu012]
 gi|313658311|ref|ZP_07815191.1| hypothetical protein MtubKV_07817 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339631500|ref|YP_004723142.1| hypothetical protein MAF_14550 [Mycobacterium africanum GM041182]
 gi|340626447|ref|YP_004744899.1| hypothetical protein MCAN_14491 [Mycobacterium canettii CIPT 
140010059]
 gi|2131063|emb|CAB09251.1| POSSIBLE CONSERVED EXPORTED PROTEIN [Mycobacterium tuberculosis 
H37Rv]
 gi|13881092|gb|AAK45741.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31618216|emb|CAD94329.1| POSSIBLE CONSERVED EXPORTED PROTEIN [Mycobacterium bovis AF2122/97]
 gi|124600731|gb|EAY59741.1| hypothetical exported protein [Mycobacterium tuberculosis C]
 gi|134149827|gb|EBA41872.1| hypothetical exported protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505376|gb|ABQ73185.1| putative conserved exported protein [Mycobacterium tuberculosis 
H37Ra]
 gi|148721180|gb|ABR05805.1| hypothetical exported protein [Mycobacterium tuberculosis F11]
 gi|253321020|gb|ACT25623.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289415797|gb|EFD13037.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
 gi|289419988|gb|EFD17189.1| hypothetical exported protein [Mycobacterium tuberculosis CPHL_A]
 gi|289439409|gb|EFD21902.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 
605]
 gi|289538533|gb|EFD43111.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543207|gb|EFD46855.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
 gi|289685712|gb|EFD53200.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289694102|gb|EFD61531.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289709098|gb|EFD73114.1| hypothetical exported protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713105|gb|EFD77117.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494733|gb|EFI30027.1| hypothetical exported protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308366367|gb|EFP55218.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu012]
 gi|323720097|gb|EGB29203.1| hypothetical protein TMMG_02135 [Mycobacterium tuberculosis CDC1551A]
 gi|326903054|gb|EGE49987.1| hypothetical exported protein [Mycobacterium tuberculosis W-148]
 gi|328459265|gb|AEB04688.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339330856|emb|CCC26527.1| putative conserved exported protein [Mycobacterium africanum 
GM041182]
 gi|340004637|emb|CCC43781.1| putative conserved exported protein [Mycobacterium canettii CIPT 
140010059]
 gi|344219263|gb|AEM99893.1| hypothetical protein MTCTRI2_1470 [Mycobacterium tuberculosis 
CTRI-2]
Length=271

 Score =  211 bits (536),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 115/230 (50%), Positives = 158/230 (69%), Gaps = 21/230 (9%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTD---RRAVERSIRISTPHNTTGHFEWVASNVVR  95
            VASV P  G VVGVAHPVVVTF+ P+T+   R A ER++ + +    TG FEW+ ++VV+
Sbjct  38   VASVLPTRGQVVGVAHPVVVTFSAPITNPANRHAAERAVEVKSTPAMTGKFEWLDNDVVQ  97

Query  96   WVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNG-------------  142
            WVP R+WP H+ V + V  L+  F+TG A++GVASIS HTFTVS +G             
Sbjct  98   WVPDRFWPAHSTVELSVGSLSSDFKTGPAVVGVASISQHTFTVSIDGVEEGPPPPLPAPH  157

Query  143  -----EVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYA  197
                      MPAS+G+P  PTP+GS+  +SKER+V+MDS ++GIP++  DGY L+  YA
Sbjct  158  HRVHFGEDGVMPASMGRPEYPTPVGSYTVLSKERSVIMDSSSVGIPVDDPDGYRLSVDYA  217

Query  198  VRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            VR+T  G+YVHSAPW++ + G  NVSHGCI+LS ++A WY++AV +GDP+
Sbjct  218  VRITSRGLYVHSAPWALPALGLENVSHGCISLSREDAEWYYNAVDIGDPV  267


>gi|312141554|ref|YP_004008890.1| hypothetical protein REQ_42450 [Rhodococcus equi 103S]
 gi|325677228|ref|ZP_08156894.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodococcus equi ATCC 33707]
 gi|311890893|emb|CBH50212.1| putative secreted protein [Rhodococcus equi 103S]
 gi|325551925|gb|EGD21621.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodococcus equi ATCC 33707]
Length=331

 Score =  211 bits (536),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 99/220 (45%), Positives = 143/220 (65%), Gaps = 1/220 (0%)

Query  29   AVPPLQPIPGVA-SVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFE  87
            A PPL P    A S++PA G VVG+A PV++ F   + DR   ER+IR++T     GHF 
Sbjct  91   APPPLGPANFSAPSLNPAPGEVVGIAQPVIIRFNEAIADRAVAERAIRVTTNPPVEGHFY  150

Query  88   WVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRT  147
            WV    VRW P+++WP + +V+V   +    F  GDAL+ VA  +    TV+RNGEV++T
Sbjct  151  WVGDKQVRWKPNQFWPANIQVTVQAGDSHSTFSIGDALVTVADDNTKQITVTRNGEVVKT  210

Query  148  MPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYV  207
            MP SLGKP   TP G++    K R + MDS T G+P+++ +GY     YA R+++SG++V
Sbjct  211  MPTSLGKPGYETPNGTYIVGEKFRDMYMDSSTYGVPIDAPEGYRTYVEYATRISYSGIFV  270

Query  208  HSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            H+APWSV  QG++NVSHGC+N+S ++  W+F+    GDP+
Sbjct  271  HAAPWSVQQQGHSNVSHGCLNVSTEDGRWFFENAKKGDPV  310


>gi|289574111|ref|ZP_06454338.1| conserved exported protein [Mycobacterium tuberculosis K85]
 gi|308231837|ref|ZP_07413954.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu001]
 gi|308369796|ref|ZP_07419101.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu002]
 21 more sequence titles
 gi|308370718|ref|ZP_07422485.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu003]
 gi|308371964|ref|ZP_07426855.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu004]
 gi|308373137|ref|ZP_07431158.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu005]
 gi|308374309|ref|ZP_07435556.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu006]
 gi|308375459|ref|ZP_07444001.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu007]
 gi|308376718|ref|ZP_07439804.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu008]
 gi|308377725|ref|ZP_07480192.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu009]
 gi|308378936|ref|ZP_07484385.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu010]
 gi|308380072|ref|ZP_07488604.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
 gi|289538542|gb|EFD43120.1| conserved exported protein [Mycobacterium tuberculosis K85]
 gi|308215924|gb|EFO75323.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu001]
 gi|308326423|gb|EFP15274.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu002]
 gi|308331109|gb|EFP19960.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu003]
 gi|308334920|gb|EFP23771.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu004]
 gi|308338729|gb|EFP27580.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu005]
 gi|308342375|gb|EFP31226.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu006]
 gi|308346256|gb|EFP35107.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu007]
 gi|308350207|gb|EFP39058.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu008]
 gi|308354849|gb|EFP43700.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu009]
 gi|308358798|gb|EFP47649.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu010]
 gi|308362735|gb|EFP51586.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
Length=254

 Score =  211 bits (536),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 115/230 (50%), Positives = 158/230 (69%), Gaps = 21/230 (9%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTD---RRAVERSIRISTPHNTTGHFEWVASNVVR  95
            VASV P  G VVGVAHPVVVTF+ P+T+   R A ER++ + +    TG FEW+ ++VV+
Sbjct  21   VASVLPTRGQVVGVAHPVVVTFSAPITNPANRHAAERAVEVKSTPAMTGKFEWLDNDVVQ  80

Query  96   WVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNG-------------  142
            WVP R+WP H+ V + V  L+  F+TG A++GVASIS HTFTVS +G             
Sbjct  81   WVPDRFWPAHSTVELSVGSLSSDFKTGPAVVGVASISQHTFTVSIDGVEEGPPPPLPAPH  140

Query  143  -----EVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYA  197
                      MPAS+G+P  PTP+GS+  +SKER+V+MDS ++GIP++  DGY L+  YA
Sbjct  141  HRVHFGEDGVMPASMGRPEYPTPVGSYTVLSKERSVIMDSSSVGIPVDDPDGYRLSVDYA  200

Query  198  VRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            VR+T  G+YVHSAPW++ + G  NVSHGCI+LS ++A WY++AV +GDP+
Sbjct  201  VRITSRGLYVHSAPWALPALGLENVSHGCISLSREDAEWYYNAVDIGDPV  250


>gi|339294411|gb|AEJ46522.1| hypothetical protein CCDC5079_1332 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298048|gb|AEJ50158.1| hypothetical protein CCDC5180_1321 [Mycobacterium tuberculosis 
CCDC5180]
Length=244

 Score =  210 bits (535),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 115/230 (50%), Positives = 158/230 (69%), Gaps = 21/230 (9%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTD---RRAVERSIRISTPHNTTGHFEWVASNVVR  95
            VASV P  G VVGVAHPVVVTF+ P+T+   R A ER++ + +    TG FEW+ ++VV+
Sbjct  11   VASVLPTRGQVVGVAHPVVVTFSAPITNPANRHAAERAVEVKSTPAMTGKFEWLDNDVVQ  70

Query  96   WVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNG-------------  142
            WVP R+WP H+ V + V  L+  F+TG A++GVASIS HTFTVS +G             
Sbjct  71   WVPDRFWPAHSTVELSVGSLSSDFKTGPAVVGVASISQHTFTVSIDGVEEGPPPPLPAPH  130

Query  143  -----EVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYA  197
                      MPAS+G+P  PTP+GS+  +SKER+V+MDS ++GIP++  DGY L+  YA
Sbjct  131  HRVHFGEDGVMPASMGRPEYPTPVGSYTVLSKERSVIMDSSSVGIPVDDPDGYRLSVDYA  190

Query  198  VRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
            VR+T  G+YVHSAPW++ + G  NVSHGCI+LS ++A WY++AV +GDP+
Sbjct  191  VRITSRGLYVHSAPWALPALGLENVSHGCISLSREDAEWYYNAVDIGDPV  240


>gi|169631848|ref|YP_001705497.1| hypothetical protein MAB_4775c [Mycobacterium abscessus ATCC 
19977]
 gi|169243815|emb|CAM64843.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=265

 Score =  210 bits (535),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 106/232 (46%), Positives = 144/232 (63%), Gaps = 21/232 (9%)

Query  39   VASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVP  98
            V S++P     VG+AHPVVVTF  PV DR A ER++ I++    TG +EW+ +N V+W P
Sbjct  32   VRSIAPMPDRRVGIAHPVVVTFNEPVADRGAAERALGITSTPPMTGRYEWLDNNAVQWSP  91

Query  99   HRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLR------------  146
             R+WPPH+ + + V        TG ALIG+AS+S HTFTVS  G   R            
Sbjct  92   DRFWPPHSTIKLMVGGKPAEISTGPALIGIASVSRHTFTVSYEGVWRRPSDGAAGLPAPH  151

Query  147  ---------TMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYA  197
                       PAS+G+P  PTP+G++  + KER+V+MDS ++GIP+ + DGY +    A
Sbjct  152  HLPRLGEEGVFPASMGRPEYPTPLGTYSVLGKERSVLMDSSSVGIPVTAPDGYKIDVENA  211

Query  198  VRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEV  249
            VR T  G++VHSAPW+V + GY NVSHGCI+L P  A WYF+ V +GDP+ V
Sbjct  212  VRFTTRGLFVHSAPWAVPAMGYENVSHGCISLPPAAAEWYFNNVNIGDPVVV  263


>gi|54027613|ref|YP_121855.1| hypothetical protein nfa56390 [Nocardia farcinica IFM 10152]
 gi|54019121|dbj|BAD60491.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=326

 Score =  209 bits (532),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 98/230 (43%), Positives = 144/230 (63%), Gaps = 2/230 (0%)

Query  18   LTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRIS  77
            L + S S  T   P     P   +++ A+G  VGVA P+++TF  P+ DR   E++I+I+
Sbjct  79   LDSGSASAVTEPTPQANFAP--PNINIADGETVGVAQPIIITFKEPIEDRATAEKAIKIT  136

Query  78   TPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFT  137
            + +   GHF W +   VRW P+ +WP +T V V     T  F  GDA I  A  +  T T
Sbjct  137  SSNEAPGHFYWWSDKQVRWRPNDFWPANTDVRVEAGGTTSSFRIGDAQITTADDATKTIT  196

Query  138  VSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYA  197
            ++RNGEV++TMP SLGKP   TP G++    + R +VMDS T G+P+++ +GY L   YA
Sbjct  197  ITRNGEVVKTMPTSLGKPGHETPNGTYIVGERHRQMVMDSSTYGVPIDAPEGYKLDVEYA  256

Query  198  VRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPI  247
             R++ SG+++H+APWSV  QG ANVSHGC+N+S ++A W+F+    GDP+
Sbjct  257  TRLSNSGIFLHAAPWSVGQQGVANVSHGCLNVSTEDARWFFENAQKGDPV  306



Lambda     K      H
   0.318    0.131    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 362093846100




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40