BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0121c
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607263|ref|NP_214635.1| hypothetical protein Rv0121c [Mycob... 288 1e-76
gi|289441490|ref|ZP_06431234.1| PPOX class F420-dependent enzyme... 288 2e-76
gi|253797039|ref|YP_003030040.1| F420-dependent enzyme [Mycobact... 287 3e-76
gi|306774206|ref|ZP_07412543.1| hypothetical protein TMAG_01254 ... 286 5e-76
gi|15839502|ref|NP_334539.1| hypothetical protein MT0129 [Mycoba... 283 5e-75
gi|289760222|ref|ZP_06519600.1| LOW QUALITY PROTEIN: conserved h... 261 2e-68
gi|296167289|ref|ZP_06849692.1| pyridoxamine 5-phosphate oxidase... 204 3e-51
gi|254822401|ref|ZP_05227402.1| pyridoxamine 5'-phosphate oxidas... 199 1e-49
gi|342859466|ref|ZP_08716120.1| pyridoxamine 5'-phosphate oxidas... 197 6e-49
gi|240168110|ref|ZP_04746769.1| hypothetical protein MkanA1_0226... 196 1e-48
gi|118619851|ref|YP_908183.1| hypothetical protein MUL_4800 [Myc... 190 5e-47
gi|183980353|ref|YP_001848644.1| hypothetical protein MMAR_0322 ... 190 8e-47
gi|41409624|ref|NP_962460.1| hypothetical protein MAP3526c [Myco... 187 6e-46
gi|254777534|ref|ZP_05219050.1| pyridoxamine 5'-phosphate oxidas... 186 7e-46
gi|315446592|ref|YP_004079471.1| pyridoxamine 5'-phosphate oxida... 170 6e-41
gi|145221671|ref|YP_001132349.1| pyridoxamine 5'-phosphate oxida... 169 2e-40
gi|118473990|ref|YP_890739.1| pyridoxamine 5'-phosphate oxidase ... 164 5e-39
gi|120406685|ref|YP_956514.1| pyridoxamine 5'-phosphate oxidase-... 162 1e-38
gi|108802092|ref|YP_642289.1| pyridoxamine 5'-phosphate oxidase-... 157 4e-37
gi|325673219|ref|ZP_08152912.1| pyridoxamine 5-phosphate oxidase... 126 1e-27
gi|284988933|ref|YP_003407487.1| PPOX class F420-dependent enzym... 125 2e-27
gi|158314008|ref|YP_001506516.1| pyridoxamine 5'-phosphate oxida... 124 4e-27
gi|333919970|ref|YP_004493551.1| PPOX class putative F420-depend... 121 3e-26
gi|312141367|ref|YP_004008703.1| fmn flavoprotein [Rhodococcus e... 121 3e-26
gi|326332339|ref|ZP_08198618.1| PPOX class probable F420-depende... 120 6e-26
gi|271969691|ref|YP_003343887.1| hypothetical protein Sros_8501 ... 117 7e-25
gi|134100949|ref|YP_001106610.1| pyridoxamine 5'-phosphate oxida... 116 1e-24
gi|86741362|ref|YP_481762.1| pyridoxamine 5'-phosphate oxidase-r... 116 1e-24
gi|297564350|ref|YP_003683323.1| F420-dependent enzyme [Nocardio... 116 1e-24
gi|257055999|ref|YP_003133831.1| Pyridoxamine 5'-phosphate oxida... 115 2e-24
gi|331697411|ref|YP_004333650.1| putative F420-dependent enzyme ... 115 3e-24
gi|317126463|ref|YP_004100575.1| F420-dependent enzyme [Intraspo... 114 4e-24
gi|262202459|ref|YP_003273667.1| PPOX class F420-dependent enzym... 114 5e-24
gi|288921737|ref|ZP_06416003.1| pyridoxamine 5'-phosphate oxidas... 114 6e-24
gi|269126384|ref|YP_003299754.1| pyridoxamine 5'-phosphate oxida... 114 6e-24
gi|302542596|ref|ZP_07294938.1| PPOX class probable F420-depende... 113 9e-24
gi|297155578|gb|ADI05290.1| hypothetical protein SBI_02169 [Stre... 112 2e-23
gi|29834025|ref|NP_828659.1| hypothetical protein SAV_7483 [Stre... 110 5e-23
gi|317506700|ref|ZP_07964485.1| pyridoxamine 5'-phosphate oxidas... 107 5e-22
gi|111223622|ref|YP_714416.1| putative signal peptide [Frankia a... 106 1e-21
gi|226309457|ref|YP_002769419.1| hypothetical protein RER_59720 ... 105 2e-21
gi|117928671|ref|YP_873222.1| pyridoxamine 5'-phosphate oxidase-... 105 2e-21
gi|326775638|ref|ZP_08234903.1| putative F420-dependent enzyme [... 105 2e-21
gi|300786540|ref|YP_003766831.1| hypothetical protein AMED_4660 ... 105 2e-21
gi|229491176|ref|ZP_04385004.1| ppox class probable f420-depende... 104 4e-21
gi|345011468|ref|YP_004813822.1| putative F420-dependent enzyme ... 103 7e-21
gi|337764686|emb|CCB73395.1| conserved protein of unknown functi... 101 3e-20
gi|325000530|ref|ZP_08121642.1| PPOX class F420-dependent enzyme... 100 7e-20
gi|229821212|ref|YP_002882738.1| pyridoxamine 5'-phosphate oxida... 99.4 2e-19
gi|226362812|ref|YP_002780590.1| hypothetical protein ROP_33980 ... 98.6 3e-19
>gi|15607263|ref|NP_214635.1| hypothetical protein Rv0121c [Mycobacterium tuberculosis H37Rv]
gi|31791300|ref|NP_853793.1| hypothetical protein Mb0126c [Mycobacterium bovis AF2122/97]
gi|121636034|ref|YP_976257.1| hypothetical protein BCG_0155c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
53 more sequence titles
Length=144
Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/144 (99%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT
Sbjct 1 MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA
Sbjct 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQSVPLNGPVIAIAVQRWASWHA
Sbjct 121 QYQSVPLNGPVIAIAVQRWASWHA 144
>gi|289441490|ref|ZP_06431234.1| PPOX class F420-dependent enzyme [Mycobacterium tuberculosis
T46]
gi|289568015|ref|ZP_06448242.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289414409|gb|EFD11649.1| PPOX class F420-dependent enzyme [Mycobacterium tuberculosis
T46]
gi|289541768|gb|EFD45417.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=144
Score = 288 bits (737), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/144 (99%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT
Sbjct 1 MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA
Sbjct 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQS+PLNGPVIAIAVQRWASWHA
Sbjct 121 QYQSIPLNGPVIAIAVQRWASWHA 144
>gi|253797039|ref|YP_003030040.1| F420-dependent enzyme [Mycobacterium tuberculosis KZN 1435]
gi|289552372|ref|ZP_06441582.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|297632595|ref|ZP_06950375.1| F420-dependent enzyme [Mycobacterium tuberculosis KZN 4207]
gi|297729569|ref|ZP_06958687.1| F420-dependent enzyme [Mycobacterium tuberculosis KZN R506]
gi|313656896|ref|ZP_07813776.1| F420-dependent enzyme [Mycobacterium tuberculosis KZN V2475]
gi|253318542|gb|ACT23145.1| F420-dependent enzyme [Mycobacterium tuberculosis KZN 1435]
gi|289437004|gb|EFD19497.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|328456828|gb|AEB02251.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length=144
Score = 287 bits (735), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/144 (99%), Positives = 143/144 (99%), Gaps = 0/144 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT
Sbjct 1 MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA
Sbjct 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQSVPLNGPVI IAVQRWASWHA
Sbjct 121 QYQSVPLNGPVITIAVQRWASWHA 144
>gi|306774206|ref|ZP_07412543.1| hypothetical protein TMAG_01254 [Mycobacterium tuberculosis SUMu001]
gi|306974541|ref|ZP_07487202.1| hypothetical protein TMJG_01305 [Mycobacterium tuberculosis SUMu010]
gi|307082249|ref|ZP_07491419.1| hypothetical protein TMKG_01303 [Mycobacterium tuberculosis SUMu011]
gi|308217212|gb|EFO76611.1| hypothetical protein TMAG_01254 [Mycobacterium tuberculosis SUMu001]
gi|308356178|gb|EFP45029.1| hypothetical protein TMJG_01305 [Mycobacterium tuberculosis SUMu010]
gi|308360118|gb|EFP48969.1| hypothetical protein TMKG_01303 [Mycobacterium tuberculosis SUMu011]
Length=144
Score = 286 bits (733), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/144 (99%), Positives = 143/144 (99%), Gaps = 0/144 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDPKLRFAQSPVARLATSTPD TPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT
Sbjct 1 MGEFDPKLRFAQSPVARLATSTPDSTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA
Sbjct 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQSVPLNGPVIAIAVQRWASWHA
Sbjct 121 QYQSVPLNGPVIAIAVQRWASWHA 144
>gi|15839502|ref|NP_334539.1| hypothetical protein MT0129 [Mycobacterium tuberculosis CDC1551]
gi|13879611|gb|AAK44353.1| hypothetical protein MT0129 [Mycobacterium tuberculosis CDC1551]
gi|323717260|gb|EGB26468.1| hypothetical protein TMMG_00546 [Mycobacterium tuberculosis CDC1551A]
Length=144
Score = 283 bits (725), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/144 (98%), Positives = 142/144 (99%), Gaps = 0/144 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT
Sbjct 1 MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKY
Sbjct 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYT 120
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQSVPLNGPVIAIAVQRWAS HA
Sbjct 121 QYQSVPLNGPVIAIAVQRWASRHA 144
>gi|289760222|ref|ZP_06519600.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
gi|289715786|gb|EFD79798.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
Length=145
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/130 (99%), Positives = 129/130 (99%), Gaps = 0/130 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT
Sbjct 1 MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA
Sbjct 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
Query 121 QYQSVPLNGP 130
QYQSVPL GP
Sbjct 121 QYQSVPLKGP 130
>gi|296167289|ref|ZP_06849692.1| pyridoxamine 5-phosphate oxidase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897389|gb|EFG76992.1| pyridoxamine 5-phosphate oxidase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=140
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/144 (70%), Positives = 115/144 (80%), Gaps = 6/144 (4%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
V EFDPK F +SPVAR+AT TP G PHLVPVVFA+G P DV+YTAVDAK KT
Sbjct 3 VAEFDPKAGFTRSPVARMATVTPGGLPHLVPVVFAVGEDSP------DVVYTAVDAKPKT 56
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
T+RLRRLAN+EHN S+LVD YADDWT+LWWVRADG A +H + V+ +AYRLLRAKY
Sbjct 57 TRRLRRLANIEHNGHVSLLVDHYADDWTRLWWVRADGTATVHTESAVLESAYRLLRAKYP 116
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQSVPL+GPVIA+AV RW+SWHA
Sbjct 117 QYQSVPLDGPVIAVAVHRWSSWHA 140
>gi|254822401|ref|ZP_05227402.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
intracellulare ATCC 13950]
Length=140
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/143 (69%), Positives = 115/143 (81%), Gaps = 4/143 (2%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDP+ RF +SPVARLAT TP G PHLVPVVFA+ A + G DV+YTAVDAK KT
Sbjct 1 MGEFDPRARFIESPVARLATVTPGGAPHLVPVVFAVAA----DPGGRDVVYTAVDAKPKT 56
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
T+RLRRLAN+E +PR S+LVD Y+DDW +LWWVRADGVA IH DG + + RLLRAKY
Sbjct 57 TRRLRRLANIEADPRVSLLVDHYSDDWARLWWVRADGVATIHDDGRALESGRRLLRAKYP 116
Query 121 QYQSVPLNGPVIAIAVQRWASWH 143
QYQSV L+GPVIA+AV RW+SWH
Sbjct 117 QYQSVSLDGPVIAVAVHRWSSWH 139
>gi|342859466|ref|ZP_08716120.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium colombiense
CECT 3035]
gi|342133707|gb|EGT86910.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium colombiense
CECT 3035]
Length=141
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/143 (68%), Positives = 113/143 (80%), Gaps = 3/143 (2%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDPK F SPVARLAT P G PHLVPVVFA+ A P G D++YTAVDAK KT
Sbjct 1 MGEFDPKAGFIGSPVARLATVAPGGLPHLVPVVFAVAAGDP---DGPDIVYTAVDAKPKT 57
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
T+RLRRLAN++ NPR S+LVD YADDWTQLWWVRADG+A +H DG+ + RLLRAKY
Sbjct 58 TRRLRRLANIDDNPRVSLLVDHYADDWTQLWWVRADGLATVHTDGDAVDLGRRLLRAKYP 117
Query 121 QYQSVPLNGPVIAIAVQRWASWH 143
QYQSV L+GPVI +AV+RW+SWH
Sbjct 118 QYQSVSLDGPVIEVAVRRWSSWH 140
>gi|240168110|ref|ZP_04746769.1| hypothetical protein MkanA1_02267 [Mycobacterium kansasii ATCC
12478]
Length=135
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/144 (66%), Positives = 110/144 (77%), Gaps = 9/144 (6%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+GEFDP F QSPVARLAT TP GTPHLVPVVFA+ DVI+TAVDAK KT
Sbjct 1 MGEFDPTAAFTQSPVARLATITPAGTPHLVPVVFAVDR---------DVIFTAVDAKPKT 51
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
T+RL+RL N+E NP S+LVD Y DDWTQLWWVRADGVAAIH DG M YRLL KY
Sbjct 52 TKRLQRLTNIESNPHVSLLVDHYDDDWTQLWWVRADGVAAIHHDGADMHTGYRLLCTKYP 111
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQS+PL+GPV+ ++V+RW+SWH+
Sbjct 112 QYQSIPLDGPVVTVSVRRWSSWHS 135
>gi|118619851|ref|YP_908183.1| hypothetical protein MUL_4800 [Mycobacterium ulcerans Agy99]
gi|118571961|gb|ABL06712.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=136
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/145 (67%), Positives = 113/145 (78%), Gaps = 10/145 (6%)
Query 1 VGE-FDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRK 59
+GE FDP +RF QSPVARLAT TP+G PH+VPVVFA+ D+I+TAVDAK K
Sbjct 1 MGEVFDPAVRFTQSPVARLATVTPEGIPHVVPVVFAVDN---------DLIFTAVDAKPK 51
Query 60 TTQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKY 119
+T+RLRRL N+E P+ S+LVD Y DDWTQLWWVRADGVA IH G V+ YRLLRAKY
Sbjct 52 STRRLRRLTNIERTPQVSLLVDHYDDDWTQLWWVRADGVAQIHPAGAVLHTGYRLLRAKY 111
Query 120 AQYQSVPLNGPVIAIAVQRWASWHA 144
AQYQSV L+GPVI +AV+RW+SWHA
Sbjct 112 AQYQSVLLDGPVICVAVRRWSSWHA 136
>gi|183980353|ref|YP_001848644.1| hypothetical protein MMAR_0322 [Mycobacterium marinum M]
gi|183173679|gb|ACC38789.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=133
Score = 190 bits (482), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/141 (67%), Positives = 110/141 (79%), Gaps = 9/141 (6%)
Query 4 FDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQR 63
FDP +RF QSPVARLAT TP+G PH+VPVVFA+ D+I+TAVDAK K+T+R
Sbjct 2 FDPAVRFTQSPVARLATVTPEGIPHVVPVVFAVDN---------DLIFTAVDAKPKSTRR 52
Query 64 LRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQ 123
LRRL N+E P+ S+LVD Y DDWTQLWWVRADGVA IH G V+ YRLLRAKYAQYQ
Sbjct 53 LRRLTNIERTPQVSLLVDHYDDDWTQLWWVRADGVAQIHPAGAVLHTGYRLLRAKYAQYQ 112
Query 124 SVPLNGPVIAIAVQRWASWHA 144
SV L+GPVI +AV+RW+SWHA
Sbjct 113 SVLLDGPVICVAVRRWSSWHA 133
>gi|41409624|ref|NP_962460.1| hypothetical protein MAP3526c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463811|ref|YP_884305.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium avium 104]
gi|41398455|gb|AAS06076.1| hypothetical protein MAP_3526c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165098|gb|ABK65995.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
avium 104]
gi|336459939|gb|EGO38851.1| PPOX class probable enzyme, Rv0121 family [Mycobacterium avium
subsp. paratuberculosis S397]
Length=145
Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/143 (66%), Positives = 111/143 (78%), Gaps = 1/143 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALG-ARRPAEATGADVIYTAVDAKRK 59
+GEFD + RF ++ VARLAT +P G PHLVPVVFAL DV+YTAVDAK K
Sbjct 1 MGEFDARARFGRASVARLATVSPGGQPHLVPVVFALAQGPDADHDADPDVVYTAVDAKPK 60
Query 60 TTQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKY 119
TT+RLRRLAN++ NP+ S+L D YADDWT+LWWVRADG+A IHRDG + YRLLRAKY
Sbjct 61 TTRRLRRLANIDANPQVSLLADHYADDWTRLWWVRADGLATIHRDGPALDTGYRLLRAKY 120
Query 120 AQYQSVPLNGPVIAIAVQRWASW 142
QYQSVPL+GPVIAIAV+RW+ W
Sbjct 121 PQYQSVPLDGPVIAIAVRRWSGW 143
>gi|254777534|ref|ZP_05219050.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
avium subsp. avium ATCC 25291]
Length=145
Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/143 (66%), Positives = 111/143 (78%), Gaps = 1/143 (0%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALG-ARRPAEATGADVIYTAVDAKRK 59
+GEFD + RF ++ VARLA+ +P G PHLVPVVFAL DV+YTAVDAK K
Sbjct 1 MGEFDARARFGRASVARLASVSPGGQPHLVPVVFALAQGPDADHDADPDVVYTAVDAKPK 60
Query 60 TTQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKY 119
TT+RLRRLAN++ NP+ S+L D YADDWT+LWWVRADG+A IHRDG + YRLLRAKY
Sbjct 61 TTRRLRRLANIDANPQVSLLADHYADDWTRLWWVRADGLATIHRDGAALETGYRLLRAKY 120
Query 120 AQYQSVPLNGPVIAIAVQRWASW 142
QYQSVPL+GPVIAIAV+RW+ W
Sbjct 121 PQYQSVPLDGPVIAIAVRRWSGW 143
>gi|315446592|ref|YP_004079471.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium sp. Spyr1]
gi|315264895|gb|ADU01637.1| Pyridoxamine 5'-phosphate oxidase [Mycobacterium sp. Spyr1]
Length=142
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/141 (61%), Positives = 102/141 (73%), Gaps = 6/141 (4%)
Query 2 GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTT 61
G FD FA++PVA LAT+ D PHLVPVVFAL A R +DV+YTAVDAK K+T
Sbjct 5 GAFDAPGVFAEAPVAMLATAGTDAVPHLVPVVFALPAGR------SDVLYTAVDAKPKST 58
Query 62 QRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQ 121
QRLRRL N+E NP S+LVD Y DDW++LWWVRADGVA+IH G M Y LLR KY Q
Sbjct 59 QRLRRLRNIEENPSVSLLVDHYDDDWSKLWWVRADGVASIHHSGVEMATGYALLRGKYPQ 118
Query 122 YQSVPLNGPVIAIAVQRWASW 142
YQ V L+GPV+ + ++RW+SW
Sbjct 119 YQRVELDGPVVTVEIRRWSSW 139
>gi|145221671|ref|YP_001132349.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
gilvum PYR-GCK]
gi|145214157|gb|ABP43561.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium gilvum PYR-GCK]
Length=142
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/141 (60%), Positives = 101/141 (72%), Gaps = 6/141 (4%)
Query 2 GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTT 61
G FD FA++PVA LAT+ D PHLVPVVFAL R +DV+YTAVDAK K+T
Sbjct 5 GAFDAPGVFAEAPVAMLATAGTDAVPHLVPVVFALPVGR------SDVLYTAVDAKPKST 58
Query 62 QRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQ 121
QRLRRL N+E NP S+LVD Y DDW++LWWVRADGVA+IH G M Y LLR KY Q
Sbjct 59 QRLRRLRNIEENPSVSLLVDHYDDDWSKLWWVRADGVASIHHSGVEMATGYALLRGKYPQ 118
Query 122 YQSVPLNGPVIAIAVQRWASW 142
YQ V L+GPV+ + ++RW+SW
Sbjct 119 YQRVELDGPVVTVEIRRWSSW 139
>gi|118473990|ref|YP_890739.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium smegmatis str.
MC2 155]
gi|118175277|gb|ABK76173.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
smegmatis str. MC2 155]
Length=142
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/144 (59%), Positives = 100/144 (70%), Gaps = 2/144 (1%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+ EFD FA +P A L+T DG PHLVPVVFA+ P IYTAVDAKRKT
Sbjct 1 MAEFDAVTAFADAPAAVLSTLNADGAPHLVPVVFAVHV--PHVEGQPARIYTAVDAKRKT 58
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
T+ LRRLAN++ + R S+LVD Y+DDWTQLWWVRADGVA H G+ + Y LLRAKY
Sbjct 59 TRNLRRLANIDRDSRVSLLVDHYSDDWTQLWWVRADGVATTHHSGDEVATGYALLRAKYH 118
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QY+ V L+GPVI++ V RWASW A
Sbjct 119 QYERVSLDGPVISVEVSRWASWQA 142
>gi|120406685|ref|YP_956514.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
vanbaalenii PYR-1]
gi|119959503|gb|ABM16508.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium vanbaalenii PYR-1]
Length=164
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/144 (60%), Positives = 103/144 (72%), Gaps = 6/144 (4%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+ +FD + FA +PVA LAT+ D PHLVPVVFA+ + R +D++YTAVDAK KT
Sbjct 26 MADFDHEAAFAAAPVAMLATAGLDAVPHLVPVVFAVPSHR------SDILYTAVDAKPKT 79
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRL N+E+NP S+LVD Y DDWT+LWWVRADG AAIH G M Y LLRAKY
Sbjct 80 TQRLRRLTNIENNPAVSLLVDHYEDDWTRLWWVRADGKAAIHHSGVEMATGYTLLRAKYP 139
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QYQ V LNGPVI + + W+SWH
Sbjct 140 QYQRVELNGPVITVEIDHWSSWHG 163
>gi|108802092|ref|YP_642289.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. MCS]
gi|119871245|ref|YP_941197.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. KMS]
gi|126438072|ref|YP_001073763.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. JLS]
gi|108772511|gb|ABG11233.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. MCS]
gi|119697334|gb|ABL94407.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. KMS]
gi|126237872|gb|ABO01273.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. JLS]
Length=135
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/144 (57%), Positives = 103/144 (72%), Gaps = 9/144 (6%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+ EFD FA +P A LAT PDG PHLVPVVFA+ + +YTAVDAKRK+
Sbjct 1 MAEFDAVEMFAAAPAATLATVNPDGAPHLVPVVFAVHR---------ETVYTAVDAKRKS 51
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
TQRLRRLAN+E +PR ++VD Y+DDW QLWWVRADGVAA+H G+ M A Y +LR KY
Sbjct 52 TQRLRRLANIEADPRVCLIVDHYSDDWGQLWWVRADGVAAVHHSGDEMAAGYAMLRQKYP 111
Query 121 QYQSVPLNGPVIAIAVQRWASWHA 144
QY+ + L+GPV+ + V+RW+SW A
Sbjct 112 QYERLALDGPVVTVEVRRWSSWQA 135
>gi|325673219|ref|ZP_08152912.1| pyridoxamine 5-phosphate oxidase [Rhodococcus equi ATCC 33707]
gi|325556054|gb|EGD25723.1| pyridoxamine 5-phosphate oxidase [Rhodococcus equi ATCC 33707]
Length=140
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/137 (52%), Positives = 87/137 (64%), Gaps = 10/137 (7%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
RF +PVAR+AT + DG PHLVPVVFA A G DV++TAVD K K+T+RLRRLA
Sbjct 12 RFVDAPVARMATVSADGGPHLVPVVFA--------AVG-DVVFTAVDDKPKSTRRLRRLA 62
Query 69 NLEHNPRASVLVDSYADDWTQLWWVRADGVAAI-HRDGEVMRAAYRLLRAKYAQYQSVPL 127
N+ R S+LVD Y DDW++LWW+R DG + D +V AA L AKY QY S+
Sbjct 63 NIAATGRVSLLVDHYDDDWSRLWWIRVDGTGEVLEPDSDVGVAAIDALVAKYHQYASMRP 122
Query 128 NGPVIAIAVQRWASWHA 144
GPVI + V W W A
Sbjct 123 TGPVIEVRVSGWREWSA 139
>gi|284988933|ref|YP_003407487.1| PPOX class F420-dependent enzyme [Geodermatophilus obscurus DSM
43160]
gi|284062178|gb|ADB73116.1| PPOX class putative F420-dependent enzyme [Geodermatophilus obscurus
DSM 43160]
Length=137
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/134 (50%), Positives = 84/134 (63%), Gaps = 9/134 (6%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
RFA S VARLAT PDG PHLVP+VFAL + T +Y+AVDAK K T RL+RLA
Sbjct 9 RFASSAVARLATVRPDGAPHLVPLVFAL-----VDGT----VYSAVDAKPKRTSRLQRLA 59
Query 69 NLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLN 128
N+ PR ++LVD Y DDW+ LWWVRADG A + D L ++ QY+ P
Sbjct 60 NVRVEPRCALLVDHYEDDWSHLWWVRADGTATVVDDPPATHPGLAALAERHPQYREQPPA 119
Query 129 GPVIAIAVQRWASW 142
GP++ + VQ+W+ W
Sbjct 120 GPLLVVTVQQWSGW 133
>gi|158314008|ref|YP_001506516.1| pyridoxamine 5'-phosphate oxidase-like protein [Frankia sp. EAN1pec]
gi|158109413|gb|ABW11610.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Frankia
sp. EAN1pec]
Length=155
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/143 (51%), Positives = 89/143 (63%), Gaps = 12/143 (8%)
Query 3 EFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQ 62
E + ++RFA + VARLAT+ DG PHLVPV FAL D + AVD K K +
Sbjct 5 EAECRVRFAAARVARLATAGVDGQPHLVPVTFALDD---------DQVAIAVDHKPKRST 55
Query 63 RLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGE--VMRA-AYRLLRAKY 119
LRRLAN+ NPR S+LVD Y DDW LWWVRADG A + DG+ V RA A L AKY
Sbjct 56 ALRRLANIAANPRVSLLVDQYTDDWDGLWWVRADGRARVVTDGDEGVKRAVAIHHLAAKY 115
Query 120 AQYQSVPLNGPVIAIAVQRWASW 142
QY +VP GPV+ + +++W W
Sbjct 116 DQYLAVPPTGPVVFVQIEKWQGW 138
>gi|333919970|ref|YP_004493551.1| PPOX class putative F420-dependent enzyme [Amycolicicoccus subflavus
DQS3-9A1]
gi|333482191|gb|AEF40751.1| PPOX class putative F420-dependent enzyme [Amycolicicoccus subflavus
DQS3-9A1]
Length=147
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/139 (48%), Positives = 83/139 (60%), Gaps = 9/139 (6%)
Query 6 PKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLR 65
P+ RFA + VARLAT PDGTPH+VP+ FA+ DV+ TA+D+K K T L+
Sbjct 14 PRQRFAAAKVARLATVRPDGTPHVVPITFAVA--------DEDVV-TAIDSKPKRTNNLQ 64
Query 66 RLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSV 125
RL NL NP S++VD Y DDW +LWWVR DG+ I DG A + L KY+QY +
Sbjct 65 RLRNLRTNPAVSLIVDHYDDDWNRLWWVRVDGLGRIAEDGPERARALKALVEKYSQYSAD 124
Query 126 PLNGPVIAIAVQRWASWHA 144
P GP I I W +W A
Sbjct 125 PPAGPAIIIEPAGWTAWSA 143
>gi|312141367|ref|YP_004008703.1| fmn flavoprotein [Rhodococcus equi 103S]
gi|311890706|emb|CBH50025.1| putative FMN flavoprotein [Rhodococcus equi 103S]
Length=127
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/134 (52%), Positives = 85/134 (64%), Gaps = 10/134 (7%)
Query 12 QSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLE 71
+PVAR+AT + DG PHLVPVVFA A G DV++TAVD K K+T+RLRRLAN+
Sbjct 2 DAPVARMATVSADGDPHLVPVVFA--------AVG-DVVFTAVDDKPKSTRRLRRLANIA 52
Query 72 HNPRASVLVDSYADDWTQLWWVRADGVAAIHR-DGEVMRAAYRLLRAKYAQYQSVPLNGP 130
R S+LVD Y DDW++LWW+R DG + D +V AA L AKY QY S+ GP
Sbjct 53 ATGRVSLLVDHYDDDWSRLWWIRVDGTGEVLEPDSDVGVAAIDALVAKYHQYASMRPTGP 112
Query 131 VIAIAVQRWASWHA 144
VI + V W W A
Sbjct 113 VIEVRVSGWREWSA 126
>gi|326332339|ref|ZP_08198618.1| PPOX class probable F420-dependent enzyme family protein [Nocardioidaceae
bacterium Broad-1]
gi|325949828|gb|EGD41889.1| PPOX class probable F420-dependent enzyme family protein [Nocardioidaceae
bacterium Broad-1]
Length=133
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/136 (50%), Positives = 84/136 (62%), Gaps = 14/136 (10%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
RFA++ VARLAT + DG P +VP+VFAL I TAVD K K+T RLRRL
Sbjct 11 RFAETRVARLATVSADGAPRIVPIVFALAGEE---------ILTAVDHKPKSTTRLRRLD 61
Query 69 NLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLN 128
++ NP S+LVD+Y DDW+QLWW RADGVA + ++ L AKYA Y+ P
Sbjct 62 DIAANPAVSLLVDAYDDDWSQLWWARADGVARVQATHDLAP-----LVAKYADYRERPPA 116
Query 129 GPVIAIAVQRWASWHA 144
GPVI + V RW+ W A
Sbjct 117 GPVIVVEVNRWSGWSA 132
>gi|271969691|ref|YP_003343887.1| hypothetical protein Sros_8501 [Streptosporangium roseum DSM
43021]
gi|270512866|gb|ACZ91144.1| hypothetical protein Sros_8501 [Streptosporangium roseum DSM
43021]
Length=137
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/142 (47%), Positives = 79/142 (56%), Gaps = 9/142 (6%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+ EF + RF + VARLAT+ G PHLVPV F L D + AVD K K
Sbjct 1 MDEFQARARFRDARVARLATADAQGRPHLVPVTFDLDG---------DTVAFAVDPKPKR 51
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYA 120
T LRRL N+ N R +LVD Y DDWT+LWWVRADG A + DG A L +Y
Sbjct 52 TTDLRRLRNIAANDRVCLLVDHYDDDWTRLWWVRADGRARVAGDGADRERALGRLAERYP 111
Query 121 QYQSVPLNGPVIAIAVQRWASW 142
QY+ P GPV+ IAV+ W W
Sbjct 112 QYRDRPPRGPVVLIAVESWTGW 133
>gi|134100949|ref|YP_001106610.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein
[Saccharopolyspora erythraea NRRL 2338]
gi|291003436|ref|ZP_06561409.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein
[Saccharopolyspora erythraea NRRL 2338]
gi|133913572|emb|CAM03685.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein
[Saccharopolyspora erythraea NRRL 2338]
Length=141
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/139 (49%), Positives = 84/139 (61%), Gaps = 13/139 (9%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
R A + +A LAT+ G PH+VP+VFA T + IY+AVDAK K T LRRLA
Sbjct 9 RLATARLAHLATADQSGKPHVVPIVFA---------TAGETIYSAVDAKPKRTTALRRLA 59
Query 69 NLEHNPRASVLVDSYAD-DWTQLWWVRADGVAAI--HRDGEVMRAAYRLLRAKYAQYQSV 125
N+E NPR +VL D Y D DW+ LWWVRADG + D E R A LL +Y Q++
Sbjct 60 NVEANPRVAVLADHYDDADWSALWWVRADGTGRVLAPEDAEARR-AVELLAERYPQHRDE 118
Query 126 PLNGPVIAIAVQRWASWHA 144
P GPV+A+ VQRW W A
Sbjct 119 PPAGPVLAVDVQRWTGWAA 137
>gi|86741362|ref|YP_481762.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Frankia
sp. CcI3]
gi|86568224|gb|ABD12033.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Frankia
sp. CcI3]
Length=170
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/142 (49%), Positives = 89/142 (63%), Gaps = 4/142 (2%)
Query 3 EFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTT- 61
+ + + RF + VARLAT+ DG PH+VPV FA+ A + + TAVD K K+T
Sbjct 27 DVEARTRFTAARVARLATAGGDGRPHIVPVTFAVNAGAVNAGAAS--VVTAVDHKPKSTL 84
Query 62 QRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRA-AYRLLRAKYA 120
LRRL N+ NP+ S+LVD+Y DDW++LWW RADG A I R GE A A LL A+Y
Sbjct 85 GGLRRLRNITENPQVSLLVDAYDDDWSRLWWARADGEARIVRAGEPGHAPAVELLIARYD 144
Query 121 QYQSVPLNGPVIAIAVQRWASW 142
QYQ+ P GP I + V RW+ W
Sbjct 145 QYQAAPPAGPAIIVTVARWSGW 166
>gi|297564350|ref|YP_003683323.1| F420-dependent enzyme [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296848799|gb|ADH70817.1| putative F420-dependent enzyme [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=150
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/133 (50%), Positives = 79/133 (60%), Gaps = 9/133 (6%)
Query 10 FAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLAN 69
FA+S VARLAT G PHLVPVVFA A G D I VD K KTT RLRRL +
Sbjct 12 FARSRVARLATVGEHGQPHLVPVVFA--------AYG-DTIAIPVDHKPKTTYRLRRLLD 62
Query 70 LEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLNG 129
+E NPR S+L D Y+DDW +LWWVRADG A + DG A L +Y QY+ P
Sbjct 63 IEGNPRVSLLADEYSDDWDRLWWVRADGEALVLHDGPAWTEARDRLVERYPQYRDTPPEE 122
Query 130 PVIAIAVQRWASW 142
+I + V+ W+ W
Sbjct 123 AIILVEVRHWSGW 135
>gi|257055999|ref|YP_003133831.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
gi|256585871|gb|ACU97004.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
Length=152
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/135 (52%), Positives = 82/135 (61%), Gaps = 12/135 (8%)
Query 10 FAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLAN 69
FA + VARLAT+ +G PHLVPV FA+ G DV+ +AVDAK KTT LRRL N
Sbjct 12 FATARVARLATADAEGVPHLVPVTFAMD--------GEDVV-SAVDAKPKTTAALRRLRN 62
Query 70 LEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLNG 129
+ NPR SVLVD Y +DW++LWWVRADG A + E AA L AKY Y P G
Sbjct 63 ITANPRVSVLVDHYEEDWSRLWWVRADGHATVAHTDERAIAA---LTAKYPPYLRTPPAG 119
Query 130 PVIAIAVQRWASWHA 144
PV+ I + W W A
Sbjct 120 PVVRIRITTWRGWSA 134
>gi|331697411|ref|YP_004333650.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
gi|326952100|gb|AEA25797.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
Length=136
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/145 (47%), Positives = 89/145 (62%), Gaps = 11/145 (7%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVD-AKRK 59
+ + D + R A SPVARLAT DGTP LVPV F L G ++++AVD K K
Sbjct 1 MSDDDRRARVAASPVARLATLRADGTPRLVPVTFVL-------LDG--LLWSAVDDVKPK 51
Query 60 TTQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKY 119
+ +RL RL +++ +PRA++LVD Y DDW +LWWVR DG A I RD R A L AKY
Sbjct 52 SGRRLARLDDVDRDPRAALLVDHYEDDWDRLWWVRVDGTAEI-RDAPACRPALDALAAKY 110
Query 120 AQYQSVPLNGPVIAIAVQRWASWHA 144
+Y+ P GPV+ + +RWA W A
Sbjct 111 PRYRDAPPPGPVLVLTPERWAGWTA 135
>gi|317126463|ref|YP_004100575.1| F420-dependent enzyme [Intrasporangium calvum DSM 43043]
gi|315590551|gb|ADU49848.1| putative F420-dependent enzyme [Intrasporangium calvum DSM 43043]
Length=147
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/140 (49%), Positives = 85/140 (61%), Gaps = 14/140 (10%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
RFA +PVARLAT T DG+PHLVPVVF L R DV++ VDAK K+T+ L+RLA
Sbjct 12 RFATAPVARLATITADGSPHLVPVVFVLEPDR-------DVVWHVVDAKPKSTRALQRLA 64
Query 69 NLEHNPRASVLVDSYADDWTQLWWVRADGVAAI----HRDGEVMRAAYRLLRAKYAQYQS 124
N+ +PR S+LVD Y DDW+ LWWVRADG A + H + A L KY Y
Sbjct 65 NIGAHPRVSLLVDHYEDDWSTLWWVRADGDATVVGLAHPEAS---PALDALILKYPAYAV 121
Query 125 VPLNGPVIAIAVQRWASWHA 144
GP++ +AV W +W A
Sbjct 122 ERPEGPMVRVAVDAWRAWAA 141
>gi|262202459|ref|YP_003273667.1| PPOX class F420-dependent enzyme [Gordonia bronchialis DSM 43247]
gi|262085806|gb|ACY21774.1| PPOX class putative F420-dependent enzyme [Gordonia bronchialis
DSM 43247]
Length=147
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/145 (48%), Positives = 81/145 (56%), Gaps = 12/145 (8%)
Query 2 GEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTT 61
EF F + VARLATS DG PHLVP+VFAL D ++T VD K K T
Sbjct 4 SEFPVHDSFRSARVARLATSGADGVPHLVPIVFALAD---------DTLFTCVDHKPKRT 54
Query 62 QRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRL--LRAKY 119
+ LRRLAN+ NPR S+LVD Y DDWT LWWVR DG A + D + + L AKY
Sbjct 55 RALRRLANIAANPRVSILVDHYTDDWTALWWVRVDGAAQV-VDASTTLGTHGVDALAAKY 113
Query 120 AQYQSVPLNGPVIAIAVQRWASWHA 144
QY+ G VIA+ W SW A
Sbjct 114 TQYREHRPAGAVIAVHDLTWHSWTA 138
>gi|288921737|ref|ZP_06416003.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
gi|288346861|gb|EFC81172.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
Length=328
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/124 (53%), Positives = 73/124 (59%), Gaps = 10/124 (8%)
Query 20 TSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLEHNPRASVL 79
T DGTPHLVPV FAL D + TAVD K K T LRRLAN+ NPR S+L
Sbjct 22 TVGTDGTPHLVPVTFALAG---------DQVVTAVDHKPKRTAALRRLANIATNPRVSLL 72
Query 80 VDSYADDWTQLWWVRADGVA-AIHRDGEVMRAAYRLLRAKYAQYQSVPLNGPVIAIAVQR 138
VD Y DDW LWWVRADG A + G AA R L AKY QY++ GPVI + V+R
Sbjct 73 VDQYTDDWHGLWWVRADGQARVVDAPGGEKSAAIRRLTAKYDQYRAAVPAGPVILVQVER 132
Query 139 WASW 142
W W
Sbjct 133 WRGW 136
>gi|269126384|ref|YP_003299754.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Thermomonospora
curvata DSM 43183]
gi|268311342|gb|ACY97716.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Thermomonospora curvata DSM 43183]
Length=152
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/134 (47%), Positives = 77/134 (58%), Gaps = 5/134 (3%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
R A +PV RLAT+ G PHLV FAL A D+I+ AVD K K T+ L+RL
Sbjct 12 RLAGAPVVRLATADERGRPHLVVATFAL-----ERAADGDLIHMAVDHKPKRTRNLKRLR 66
Query 69 NLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLN 128
N+ NP SVL D Y D+W++LWWVRADG A + D + AA LL +Y QY+ P
Sbjct 67 NIAVNPWVSVLADHYEDNWSRLWWVRADGRARVSDDPRELHAAAHLLAQRYPQYRHRPPQ 126
Query 129 GPVIAIAVQRWASW 142
GP I + V W W
Sbjct 127 GPAIVVTVHHWVGW 140
>gi|302542596|ref|ZP_07294938.1| PPOX class probable F420-dependent enzyme family protein [Streptomyces
hygroscopicus ATCC 53653]
gi|302460214|gb|EFL23307.1| PPOX class probable F420-dependent enzyme family protein [Streptomyces
himastatinicus ATCC 53653]
Length=143
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/132 (51%), Positives = 75/132 (57%), Gaps = 6/132 (4%)
Query 17 RLATSTPDGTPHLVPVVFALGARRPAEAT----GADVIYTAVDAKRKTTQRLRRLANLEH 72
RLAT+ G PHLVP FAL A A+ T G D + TAVD K K Q L+RL N+
Sbjct 3 RLATTDEGGRPHLVPATFALTAPDSADGTDGADGMDTVVTAVDHKPKRHQDLKRLRNIHT 62
Query 73 NPRASVLVDSYADDWTQLWWVRADGVAAI--HRDGEVMRAAYRLLRAKYAQYQSVPLNGP 130
NP S+LVD Y +DW QLWWVRADGVA I R L KY QY P GP
Sbjct 63 NPAVSLLVDHYDEDWRQLWWVRADGVARIVPAEAAAERAEPVRRLVDKYPQYADRPPRGP 122
Query 131 VIAIAVQRWASW 142
VIAI V RW+ W
Sbjct 123 VIAIEVTRWSGW 134
>gi|297155578|gb|ADI05290.1| hypothetical protein SBI_02169 [Streptomyces bingchenggensis
BCW-1]
Length=129
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/134 (53%), Positives = 80/134 (60%), Gaps = 13/134 (9%)
Query 15 VARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLEHNP 74
+ARLAT G PHLVPVVFAL TG D + TAVD K K +QRLRRL N+ NP
Sbjct 1 MARLATVGAGGRPHLVPVVFAL--------TG-DTVATAVDHKPKRSQRLRRLDNIRANP 51
Query 75 RASVLVDSYADDWTQLWWVRADGVAAI--HRDGEVMRAAY-RLLRAKY-AQYQSVPLNGP 130
+LVD Y +DW LWW RADG A + D AAY RLL KY AQY P GP
Sbjct 52 AVCLLVDGYDEDWDVLWWARADGTARVLPPADESAASAAYVRLLADKYAAQYADRPPTGP 111
Query 131 VIAIAVQRWASWHA 144
V+ IAV RW+ W A
Sbjct 112 VVEIAVDRWSGWQA 125
>gi|29834025|ref|NP_828659.1| hypothetical protein SAV_7483 [Streptomyces avermitilis MA-4680]
gi|29611150|dbj|BAC75194.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=153
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/151 (48%), Positives = 88/151 (59%), Gaps = 16/151 (10%)
Query 1 VGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKT 60
+ E + + RF + VARLAT +G PHLVPVVFA GA+V+ TAVD K K
Sbjct 4 MDEDEARRRFMAARVARLATVDTEGRPHLVPVVFA--------RHGAEVV-TAVDWKPKR 54
Query 61 TQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAI-------HRDGEVMRAAYR 113
+ RL+RL N+ +P +LVD+Y +DW +LWWVRADG A I R E A
Sbjct 55 SPRLKRLRNIAAHPAVCLLVDAYDEDWDRLWWVRADGRARILPPDAPEPRVREEYAAVLA 114
Query 114 LLRAKYAQYQSVPLNGPVIAIAVQRWASWHA 144
+LR KYA Y+ P GPVIAI V RW W A
Sbjct 115 VLREKYAPYRQRPPGGPVIAITVHRWHGWRA 145
>gi|317506700|ref|ZP_07964485.1| pyridoxamine 5'-phosphate oxidase [Segniliparus rugosus ATCC
BAA-974]
gi|316254999|gb|EFV14284.1| pyridoxamine 5'-phosphate oxidase [Segniliparus rugosus ATCC
BAA-974]
Length=140
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/137 (46%), Positives = 81/137 (60%), Gaps = 10/137 (7%)
Query 7 KLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRR 66
K RF ++ VARLAT++ G PHLVPVVFAL DV+ AVD K K+T L+R
Sbjct 9 KGRFGKARVARLATTSASGIPHLVPVVFALQD---------DVVVIAVDQKPKSTTDLKR 59
Query 67 LANLEHNPRASVLVDSYAD-DWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSV 125
+ N+ N R S+L D Y D DW++LWWVRADG A + +G A L AKY QY+
Sbjct 60 IRNIRANSRVSLLADEYDDADWSRLWWVRADGSARVVTEGAQREEALAWLCAKYNQYRKA 119
Query 126 PLNGPVIAIAVQRWASW 142
+GPVI I + + W
Sbjct 120 RPDGPVIWIDITAVSGW 136
>gi|111223622|ref|YP_714416.1| putative signal peptide [Frankia alni ACN14a]
gi|111151154|emb|CAJ62864.1| conserved hypothetical protein; putative signal peptide [Frankia
alni ACN14a]
Length=180
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/166 (43%), Positives = 89/166 (54%), Gaps = 27/166 (16%)
Query 4 FDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGA--------RRPAEATGAD------- 48
+ + RFA + VARLAT+ DG P +VPV FA+ A PAEA G
Sbjct 6 LEARKRFAAARVARLATAGADGQPLVVPVTFAVEAGSTPDEAGSTPAEAGGEPRELGSAG 65
Query 49 ----------VIYTAVDAKRKTTQR-LRRLANLEHNPRASVLVDSYADDWTQLWWVRADG 97
I T VD K K+T+ LRRL ++ NP S+LVD Y DDW +LWW RADG
Sbjct 66 GDRGGAGPPATIVTVVDHKPKSTRTGLRRLRDIHANPLVSLLVDHYDDDWARLWWTRADG 125
Query 98 VAAIHRDGEVMR-AAYRLLRAKYAQYQSVPLNGPVIAIAVQRWASW 142
+A+I G+ AA L +Y QY+ VP GP I +AV RW+ W
Sbjct 126 LASIVEVGDPRHAAAVAALSVRYRQYRQVPPTGPAIIVAVTRWSGW 171
>gi|226309457|ref|YP_002769419.1| hypothetical protein RER_59720 [Rhodococcus erythropolis PR4]
gi|226188576|dbj|BAH36680.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=138
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/141 (45%), Positives = 80/141 (57%), Gaps = 10/141 (7%)
Query 5 DPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRL 64
DP+ RF + VA LAT+ G PH+VP+VF L D +Y+ VD K KTT L
Sbjct 5 DPRARFEAARVAHLATADAAGVPHIVPLVFVLVG---------DTVYSCVDHKPKTTTAL 55
Query 65 RRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDG-EVMRAAYRLLRAKYAQYQ 123
RRL N+ RAS+LVD Y D+W+ LWWVR DG A + G + +A L AKY QY
Sbjct 56 RRLRNITETGRASLLVDHYDDNWSALWWVRVDGRAEVLGPGTKESESAIDALAAKYPQYV 115
Query 124 SVPLNGPVIAIAVQRWASWHA 144
+G VIA+ W+SW A
Sbjct 116 DHRPHGQVIAVRDVEWSSWSA 136
>gi|117928671|ref|YP_873222.1| pyridoxamine 5'-phosphate oxidase-like protein [Acidothermus
cellulolyticus 11B]
gi|117649134|gb|ABK53236.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Acidothermus cellulolyticus 11B]
Length=200
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/135 (46%), Positives = 78/135 (58%), Gaps = 12/135 (8%)
Query 10 FAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLAN 69
FA PVA LA+ + G PH+VP+VF + + I TAVD K K+ + LRR+ N
Sbjct 13 FATRPVAYLASCSGAGVPHIVPIVFVVNG---------NTIVTAVDRKPKSGRVLRRIRN 63
Query 70 LEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRA--AYRLLRAKYAQYQSVPL 127
+ NP +VL D Y DDW+ LWW+RADG A + DG A A+ L A+Y QY P
Sbjct 64 IRENPSVAVLADRYTDDWSMLWWIRADGRARLM-DGADPSAQRAWGALTARYPQYAEHPP 122
Query 128 NGPVIAIAVQRWASW 142
G VIAI V RW+ W
Sbjct 123 AGMVIAIDVHRWSGW 137
>gi|326775638|ref|ZP_08234903.1| putative F420-dependent enzyme [Streptomyces cf. griseus XylebKG-1]
gi|326655971|gb|EGE40817.1| putative F420-dependent enzyme [Streptomyces griseus XylebKG-1]
Length=139
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/133 (45%), Positives = 74/133 (56%), Gaps = 10/133 (7%)
Query 10 FAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLAN 69
F + V RL T +G PHLVP +AL D + AVD K K+T L+RL N
Sbjct 12 FGRGRVLRLGTVDSEGQPHLVPATYALAD---------DAVVIAVDHKPKSTFNLKRLRN 62
Query 70 LEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLNG 129
+ NP ++LVD Y DDW QLWWVRADG A + + E + L KYAQY++ G
Sbjct 63 IAENPTVTLLVDHYDDDWDQLWWVRADGEAEV-LENEHAQELVESLVDKYAQYRAQRPAG 121
Query 130 PVIAIAVQRWASW 142
PVI I V RW+ W
Sbjct 122 PVIKIRVNRWSGW 134
>gi|300786540|ref|YP_003766831.1| hypothetical protein AMED_4660 [Amycolatopsis mediterranei U32]
gi|299796054|gb|ADJ46429.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340528020|gb|AEK43225.1| hypothetical protein RAM_23725 [Amycolatopsis mediterranei S699]
Length=133
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/134 (47%), Positives = 74/134 (56%), Gaps = 12/134 (8%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
RF + VARLAT + DG PHLVPV FA+ DV+ AVD K K+T LRRL
Sbjct 9 RFTAARVARLATVSADGVPHLVPVTFAVRG---------DVVVFAVDHKPKSTTALRRLR 59
Query 69 NLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLN 128
N+E NP L D YA+DW++LWW RADGVA + G A L AKY QY P
Sbjct 60 NIESNPAVCFLADGYAEDWSRLWWARADGVARVEPPGAEPVA---WLVAKYEQYAQRPPE 116
Query 129 GPVIAIAVQRWASW 142
V+ V W+ W
Sbjct 117 HAVVVTDVHTWSGW 130
>gi|229491176|ref|ZP_04385004.1| ppox class probable f420-dependent enzyme family protein [Rhodococcus
erythropolis SK121]
gi|229321914|gb|EEN87707.1| ppox class probable f420-dependent enzyme family protein [Rhodococcus
erythropolis SK121]
Length=138
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/141 (45%), Positives = 79/141 (57%), Gaps = 10/141 (7%)
Query 5 DPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRL 64
DP+ RF + VA LAT+ G PH+VP+VF L +Y+ VD K KTT L
Sbjct 5 DPRARFEAARVAHLATADAAGVPHIVPLVFVLVG---------GTVYSCVDHKPKTTTAL 55
Query 65 RRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDG-EVMRAAYRLLRAKYAQYQ 123
RRL N+ RAS+LVD Y DDW+ LWWVR DG A + G + +A L AKY QY
Sbjct 56 RRLRNITETGRASLLVDHYDDDWSALWWVRVDGHAEVLDPGTKESESAIDALAAKYPQYV 115
Query 124 SVPLNGPVIAIAVQRWASWHA 144
+G VIA+ W+SW A
Sbjct 116 DHRPHGQVIAVRDVEWSSWSA 136
>gi|345011468|ref|YP_004813822.1| putative F420-dependent enzyme [Streptomyces violaceusniger Tu
4113]
gi|344037817|gb|AEM83542.1| putative F420-dependent enzyme [Streptomyces violaceusniger Tu
4113]
Length=143
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/140 (47%), Positives = 81/140 (58%), Gaps = 13/140 (9%)
Query 9 RFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLA 68
RFA++ +ARLAT + PHLVPVVFAL TG D + TAVD K K T RLRRL
Sbjct 12 RFARARLARLATVGAEDRPHLVPVVFAL--------TG-DTVVTAVDHKPKRTTRLRRLD 62
Query 69 NLEHNPRASVLVDSYADDWTQLWWVRADGVAAI--HRDGEVMRAAY-RLLRAKY-AQYQS 124
N+ +P +LVD Y ++W LWW R DG A + D + + Y RLL Y AQY
Sbjct 63 NIRAHPAVCLLVDDYDENWDHLWWARGDGTARVLPPADESALSSEYIRLLVDTYPAQYGD 122
Query 125 VPLNGPVIAIAVQRWASWHA 144
P GPV+ + V RW+ W A
Sbjct 123 RPPRGPVVEVTVGRWSGWRA 142
>gi|337764686|emb|CCB73395.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=143
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/139 (47%), Positives = 82/139 (59%), Gaps = 13/139 (9%)
Query 10 FAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLAN 69
F S VARLAT+ P G PHLVPVVFA+ TG D + AVD K K + RL+RLAN
Sbjct 13 FTASRVARLATADPAGRPHLVPVVFAV--------TG-DTVVLAVDHKPKRSIRLKRLAN 63
Query 70 LEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRD-GEVMRAAYR--LLRAKY-AQYQSV 125
+ NP +L D Y ++W +LWW RADG A + E R+ + LL AKY QY +
Sbjct 64 ITANPAVCLLADGYHEEWDRLWWARADGDARVLLPAAECARSGHHVALLTAKYRDQYANR 123
Query 126 PLNGPVIAIAVQRWASWHA 144
GPV+ + V+RW+ W A
Sbjct 124 APAGPVVEVTVRRWSGWRA 142
>gi|325000530|ref|ZP_08121642.1| PPOX class F420-dependent enzyme [Pseudonocardia sp. P1]
Length=141
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/132 (44%), Positives = 78/132 (60%), Gaps = 11/132 (8%)
Query 15 VARLAT-STPDGTPHLVPVVFALGARRPAEATGADVIYTAVD-AKRKTTQRLRRLANLEH 72
VARLAT DG+P LVP+ FAL G ++ +AVD K K RL RL +++
Sbjct 18 VARLATIRAADGSPRLVPITFAL-------VDG--LVVSAVDRVKPKRHTRLARLRDIDA 68
Query 73 NPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLNGPVI 132
+PR +L D Y DDW+QLWWVR DG A++H G++ A L AKY Y++ P +GPV+
Sbjct 69 DPRVGLLADHYDDDWSQLWWVRLDGTASVHETGDLRARAIDALVAKYEPYRAEPPDGPVV 128
Query 133 AIAVQRWASWHA 144
+ RW W A
Sbjct 129 VLTPDRWTGWSA 140
>gi|229821212|ref|YP_002882738.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Beutenbergia
cavernae DSM 12333]
gi|229567125|gb|ACQ80976.1| pyridoxamine 5'-phosphate oxidase-related protein FMN-binding
[Beutenbergia cavernae DSM 12333]
Length=145
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/138 (48%), Positives = 85/138 (62%), Gaps = 2/138 (1%)
Query 7 KLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRR 66
++RFA +P A LAT+ DG PHLVPVV A+GA A G DV+ AVD K K + LRR
Sbjct 7 RVRFAGAPHAYLATADADGVPHLVPVVVAVGAG--AGPGGRDVVVHAVDHKPKRSPDLRR 64
Query 67 LANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVP 126
LAN+ NP ++L DSY DDW++LWWVRAD A + G + A LL A++ QY
Sbjct 65 LANIRANPTVALLADSYDDDWSRLWWVRADAHARVVDGGPELEQAIELLVARHPQYADRR 124
Query 127 LNGPVIAIAVQRWASWHA 144
+GP + V RW+ W A
Sbjct 125 PDGPAVVAEVTRWSGWKA 142
>gi|226362812|ref|YP_002780590.1| hypothetical protein ROP_33980 [Rhodococcus opacus B4]
gi|226241297|dbj|BAH51645.1| hypothetical protein [Rhodococcus opacus B4]
Length=137
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/122 (47%), Positives = 68/122 (56%), Gaps = 10/122 (8%)
Query 24 DGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLEHNPRASVLVDSY 83
DG PHLVP+VFAL D IY+ VD K K T LRRL+N+ NP ++LVD Y
Sbjct 22 DGAPHLVPLVFALDT---------DTIYSCVDHKPKRTTALRRLSNISANPAVTLLVDHY 72
Query 84 ADDWTQLWWVRADGVAAIHRDGEVM-RAAYRLLRAKYAQYQSVPLNGPVIAIAVQRWASW 142
++W LWWVR DG A I G AA +L AKY QY +GPV+AI W W
Sbjct 73 DENWDHLWWVRVDGRAEILEPGSAEGAAAIDVLAAKYPQYVDRRPDGPVVAIRTLSWHHW 132
Query 143 HA 144
A
Sbjct 133 SA 134
Lambda K H
0.321 0.132 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128702269584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40