BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0124 Length=487 Score E Sequences producing significant alignments: (Bits) Value gi|57116692|ref|YP_177693.1| PE-PGRS family protein [Mycobacteri... 803 0.0 gi|339293188|gb|AEJ45299.1| PE-PGRS family protein [Mycobacteriu... 802 0.0 gi|148659888|ref|YP_001281411.1| PE-PGRS family protein [Mycobac... 801 0.0 gi|289445654|ref|ZP_06435398.1| predicted protein [Mycobacterium... 167 4e-39 gi|289756186|ref|ZP_06515564.1| PE-PGRS family protein [Mycobact... 166 6e-39 gi|148821316|ref|YP_001286070.1| PE-PGRS family protein [Mycobac... 166 7e-39 gi|15839505|ref|NP_334542.1| PE_PGRS family protein [Mycobacteri... 166 7e-39 gi|294992968|ref|ZP_06798659.1| PE-PGRS family protein [Mycobact... 166 9e-39 gi|254549059|ref|ZP_05139506.1| PE-PGRS family protein [Mycobact... 166 9e-39 gi|31791303|ref|NP_853796.1| PE-PGRS family protein [Mycobacteri... 166 9e-39 gi|340625159|ref|YP_004743611.1| PE-PGRS family protein [Mycobac... 166 1e-38 gi|254233516|ref|ZP_04926842.1| PE-PGRS family protein [Mycobact... 164 2e-38 gi|183983189|ref|YP_001851480.1| PE-PGRS family protein [Mycobac... 155 1e-35 gi|183982716|ref|YP_001851007.1| PE-PGRS family protein, PE_PGRS... 153 7e-35 gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 150 3e-34 gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacteriu... 150 3e-34 gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 150 4e-34 gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacteri... 150 4e-34 gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacteri... 150 4e-34 gi|183980330|ref|YP_001848621.1| PE-PGRS family protein, PE_PGRS... 149 1e-33 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 149 2e-33 gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 147 4e-33 gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 146 8e-33 gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobac... 144 2e-32 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 142 2e-31 gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 141 2e-31 gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 141 2e-31 gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobac... 141 3e-31 gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacteri... 141 3e-31 gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 140 4e-31 gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 140 4e-31 gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 140 4e-31 gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacteri... 140 4e-31 gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacteri... 140 5e-31 gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 140 5e-31 gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 140 5e-31 gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [My... 140 5e-31 gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobac... 139 8e-31 gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobac... 139 8e-31 gi|289574445|ref|ZP_06454672.1| predicted protein [Mycobacterium... 139 8e-31 gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacteri... 139 8e-31 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 139 9e-31 gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobact... 139 9e-31 gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobact... 139 1e-30 gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacteri... 139 1e-30 gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 135 1e-29 gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacteri... 135 1e-29 gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 135 1e-29 gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacteri... 135 1e-29 gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacteri... 135 1e-29 >gi|57116692|ref|YP_177693.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7476119|pir||E70983 hypothetical glycine-rich protein Rv0124 - Mycobacterium tuberculosis (strain H37RV) gi|41352733|emb|CAE55243.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=487 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/487 (100%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 Query 121 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGH 180 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGH Sbjct 121 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGH 180 Query 181 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG 240 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG Sbjct 181 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG 240 Query 241 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG 300 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG Sbjct 241 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG 300 Query 301 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA 360 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA Sbjct 301 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA 360 Query 361 GGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG 420 GGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG Sbjct 361 GGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG 420 Query 421 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP 480 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP Sbjct 421 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP 480 Query 481 GDTGQPG 487 GDTGQPG Sbjct 481 GDTGQPG 487 >gi|339293188|gb|AEJ45299.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=487 Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 Query 121 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGH 180 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGG+GGAGGSGAAGGAGGH Sbjct 121 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGAGGAGGSGAAGGAGGH 180 Query 181 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG 240 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG Sbjct 181 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG 240 Query 241 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG 300 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG Sbjct 241 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG 300 Query 301 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA 360 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA Sbjct 301 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA 360 Query 361 GGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG 420 GGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG Sbjct 361 GGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG 420 Query 421 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP 480 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP Sbjct 421 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP 480 Query 481 GDTGQPG 487 GDTGQPG Sbjct 481 GDTGQPG 487 >gi|148659888|ref|YP_001281411.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148504040|gb|ABQ71849.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=487 Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 486/487 (99%), Gaps = 0/487 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 Query 121 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGH 180 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGH Sbjct 121 GAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGH 180 Query 181 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG 240 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG Sbjct 181 GGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADANIVSGGDGG 240 Query 241 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG 300 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG Sbjct 241 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGGAGGHGGQGGG 300 Query 301 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA 360 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA Sbjct 301 TGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAGGA 360 Query 361 GGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG 420 GGDSSF NGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG Sbjct 361 GGDSSFVNGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGGDARLIGHGGAG 420 Query 421 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP 480 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP Sbjct 421 GAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGAPGTGGTLQAAVSGLVTALFGAPGQP 480 Query 481 GDTGQPG 487 GDTGQPG Sbjct 481 GDTGQPG 487 >gi|289445654|ref|ZP_06435398.1| predicted protein [Mycobacterium tuberculosis CPHL_A] gi|289418612|gb|EFD15813.1| predicted protein [Mycobacterium tuberculosis CPHL_A] Length=427 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 75 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 134 >gi|289756186|ref|ZP_06515564.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] gi|289696773|gb|EFD64202.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] Length=276 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 >gi|148821316|ref|YP_001286070.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148719843|gb|ABR04468.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=561 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 75 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 134 >gi|15839505|ref|NP_334542.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13879614|gb|AAK44356.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=561 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 75 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 134 >gi|294992968|ref|ZP_06798659.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] gi|339296835|gb|AEJ48945.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=541 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 >gi|254549059|ref|ZP_05139506.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=547 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 >gi|31791303|ref|NP_853796.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|121636037|ref|YP_976260.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988510|ref|YP_002643197.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31616888|emb|CAD92990.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121491684|emb|CAL70142.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771623|dbj|BAH24429.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600053|emb|CCC62721.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=538 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 >gi|340625159|ref|YP_004743611.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340003349|emb|CCC42468.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=547 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 >gi|254233516|ref|ZP_04926842.1| PE-PGRS family protein [Mycobacterium tuberculosis C] gi|124603309|gb|EAY61584.1| PE-PGRS family protein [Mycobacterium tuberculosis C] Length=262 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 119/120 (99%), Positives = 119/120 (99%), Gaps = 0/120 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 AYQALS QAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD Sbjct 61 AYQALSTQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINAPTQALLGRPLIGNGAD 120 >gi|183983189|ref|YP_001851480.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176515|gb|ACC41625.1| PE-PGRS family protein [Mycobacterium marinum M] Length=597 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/151 (65%), Positives = 110/151 (73%), Gaps = 8/151 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSV E + AAA+D+ IGS++ AAN AAAPT VLAAGADEVS A+AALFSGH Q Sbjct 1 MSFVSVTQEALAAAASDVGVIGSSLQAANVVAAAPTAGVLAAGADEVSVAMAALFSGHGQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQ-------VEQQLLAAINAPTQALLGRP 113 AYQALSAQA AFH QF+Q L GAYAAAE VEQ +L A+NAPTQALLGRP Sbjct 61 AYQALSAQANAFHAQFLQALTNAGGAYAAAEVANVSPLQGVEQGVLGAVNAPTQALLGRP 120 Query 114 LIGNGADGAPGTGQAGGAGGILYGNGGNGGS 144 LIG+G G + GGAGG+LYGNGG G S Sbjct 121 LIGDGTAGTAASPN-GGAGGLLYGNGGAGYS 150 >gi|183982716|ref|YP_001851007.1| PE-PGRS family protein, PE_PGRS34_1 [Mycobacterium marinum M] gi|183176042|gb|ACC41152.1| PE-PGRS family protein, PE_PGRS34_1 [Mycobacterium marinum M] Length=521 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 87/127 (69%), Positives = 95/127 (75%), Gaps = 3/127 (2%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV APE+V AAA+D+A IGS I+ AN AA APTTAVLAAGADEVSA IAALF+ H Q Sbjct 1 MSFVVAAPEMVQAAASDIASIGSTINMANVAATAPTTAVLAAGADEVSAVIAALFAAHGQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA---QVEQQLLAAINAPTQALLGRPLIGN 117 AYQ LSAQAA FH QFV + AGAY+ AEA Q LL A N T A+LGRPLIGN Sbjct 61 AYQTLSAQAAQFHDQFVAAMTSAAGAYSGAEAANVSPLQSLLDAANGETMAMLGRPLIGN 120 Query 118 GADGAPG 124 GADGAPG Sbjct 121 GADGAPG 127 >gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 4207] gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1303 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/124 (68%), Positives = 94/124 (76%), Gaps = 2/124 (1%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV PE++ AATDLA IGS I+AAN AAAA VL A ADEVS A+AALF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA-QVEQQLLAAINAPTQALLGRPLIGNGA 119 YQ +SAQ A FH +FVQTL+ A +Y AAEA VEQ LLAA+NAPTQAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 DGAP 123 DG+P Sbjct 120 DGSP 123 >gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=650 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 87/126 (70%), Positives = 99/126 (79%), Gaps = 3/126 (2%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS+V PE+V AAA +LA IGS +SAANAAA APTT VLAAGADEVSAA+A+LFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE---AQVEQQLLAAINAPTQALLGRPLIGN 117 AYQ L QAAAFH++F+Q L+ AGAY +AE A QQ L INAPTQ LLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 118 GADGAP 123 G +GAP Sbjct 121 GTNGAP 126 >gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=998 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/124 (68%), Positives = 94/124 (76%), Gaps = 2/124 (1%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV PE++ AATDLA IGS I+AAN AAAA VL A ADEVS A+AALF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA-QVEQQLLAAINAPTQALLGRPLIGNGA 119 YQ +SAQ A FH +FVQTL+ A +Y AAEA VEQ LLAA+NAPTQAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 DGAP 123 DG+P Sbjct 120 DGSP 123 >gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis (strain H37RV) gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=606 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/126 (70%), Positives = 99/126 (79%), Gaps = 3/126 (2%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS+V PE+V AAA +LA IGS +SAANAAA APTT VLAAGADEVSAA+A+LFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE---AQVEQQLLAAINAPTQALLGRPLIGN 117 AYQ L QAAAFH++F+Q L+ AGAY +AE A QQ L INAPTQ LLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 118 GADGAP 123 G +GAP Sbjct 121 GTNGAP 126 >gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 18 more sequence titles Length=609 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/126 (70%), Positives = 99/126 (79%), Gaps = 3/126 (2%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS+V PE+V AAA +LA IGS +SAANAAA APTT VLAAGADEVSAA+A+LFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE---AQVEQQLLAAINAPTQALLGRPLIGN 117 AYQ L QAAAFH++F+Q L+ AGAY +AE A QQ L INAPTQ LLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 118 GADGAP 123 G +GAP Sbjct 121 GTNGAP 126 >gi|183980330|ref|YP_001848621.1| PE-PGRS family protein, PE_PGRS1 [Mycobacterium marinum M] gi|183173656|gb|ACC38766.1| PE-PGRS family protein, PE_PGRS1 [Mycobacterium marinum M] Length=557 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/135 (64%), Positives = 98/135 (73%), Gaps = 10/135 (7%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS+V PE+V AAATDLAG+ S +SAAN+AAA PT AV+AAGADEVSA IA LF HAQ Sbjct 1 MSYVFATPELVAAAATDLAGVQSVLSAANSAAAGPTMAVMAAGADEVSALIAGLFDAHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTL------AGGAGAYAAAEAQVEQQL----LAAINAPTQALL 110 AYQALSAQA FH QFVQ L A A A+ QV Q L LAA+NAPTQA+L Sbjct 61 AYQALSAQALVFHDQFVQMLNAGASSYAAAEAANASPLQVVQNLGQNVLAAVNAPTQAVL 120 Query 111 GRPLIGNGADGAPGT 125 GRPLIG+GA+G+P T Sbjct 121 GRPLIGDGANGSPNT 135 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/121 (70%), Positives = 97/121 (81%), Gaps = 1/121 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFVSV PE+VVAAA+DL+GI SAI+ AN+ AAA TT VL A ADEVSAAIAALF HAQ Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-AQVEQQLLAAINAPTQALLGRPLIGNGA 119 YQA+SA+ AAFH +FVQ+L GAG+Y AE A EQ LL +NAPTQAL GRPLIG+GA Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAEQGLLGLVNAPTQALFGRPLIGDGA 120 Query 120 D 120 + Sbjct 121 N 121 >gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M] Length=965 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 80/123 (66%), Positives = 91/123 (74%), Gaps = 3/123 (2%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 M+FV VAPE+V AAA+DLA IGSAI+ AN A AAPT +LAAG DEVS AIA+LFSGHA Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE---AQVEQQLLAAINAPTQALLGRPLIGN 117 YQ L A+ AFH QFV L G G Y++AE A Q LL +NAPTQALLGRPLIG+ Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120 Query 118 GAD 120 GAD Sbjct 121 GAD 123 >gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1483 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 84/121 (70%), Positives = 95/121 (79%), Gaps = 1/121 (0%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV+VAPE+V AA DLAGIGS+ISAANAAA A TT V+ A ADEVSAAIAALF HA+ Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-AQVEQQLLAAINAPTQALLGRPLIGNGA 119 YQA+SAQ+AAFH++ VQTL GA AY E A +Q LL A+N PTQA LGRPLIGNG Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIGNGT 120 Query 120 D 120 D Sbjct 121 D 121 >gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M] Length=723 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/153 (59%), Positives = 105/153 (69%), Gaps = 12/153 (7%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS++ V PE++ +AATDL GI SA+S AN AAA PTT VLAAGADEVSAA+A+LF+G+ Q Sbjct 1 MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ 60 Query 61 AYQALSAQAAAFHQQFVQ------TLAGGAGAYAAAEAQ-VEQQLLAAINAPTQALLGRP 113 AYQ++S QA AF QF+Q A A + + Q E +L INAPTQ LLGRP Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP 120 Query 114 LIGNGADGAPGT--GQAGGAGGILYGNGGNGGS 144 LIG DGA GT GGAGG LYGNGGNG S Sbjct 121 LIG---DGAAGTAANPNGGAGGFLYGNGGNGFS 150 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V VAPE V AAA D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] Length=2118 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/138 (64%), Positives = 101/138 (74%), Gaps = 10/138 (7%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V+V+PE+V AA+DLA IGS++ AANAAAA PTT VL+A ADEVS AIA LF HA Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA---------QV-EQQLLAAINAPTQALL 110 YQ+LSA+ AAFH+QFVQTL GAG Y + EA Q+ EQ L AINAPTQ+ L Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120 Query 111 GRPLIGNGADGAPGTGQA 128 GRPLIGNG D PG+GQA Sbjct 121 GRPLIGNGVDATPGSGQA 138 >gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=1330 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=737 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=795 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V VAPE V AAA D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis CCDC5079] Length=742 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=805 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis CCDC5180] Length=742 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661244|ref|YP_001282767.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7441232|pir||G70917 hypothetical glycine-rich protein Rv1452c - Mycobacterium tuberculosis (strain H37RV) gi|38490272|emb|CAE55391.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505396|gb|ABQ73205.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=741 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881115|gb|AAK45763.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=738 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=740 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V VAPE V AAA D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=740 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V VAPE V AAA D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [Mycobacterium tuberculosis T46] gi|289415818|gb|EFD13058.1| PE domain-containing protein [Mycobacterium tuberculosis T46] Length=527 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE V AAA+D+A IGS+I AN+AAA TT+VLAAGADEVSAAIA LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +F QTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M] Length=625 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 83/111 (75%), Positives = 90/111 (82%), Gaps = 3/111 (2%) Query 16 TDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQAYQALSAQAAAFHQQ 75 TDLA +GS+ISAANAAAAAPT +VLAAGADEVSA +AALF HAQAYQ+LSAQAA FH+Q Sbjct 16 TDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQAYQSLSAQAALFHEQ 75 Query 76 FVQTLAGGAGAYAAAEA---QVEQQLLAAINAPTQALLGRPLIGNGADGAP 123 FVQ L GAG+YA AEA Q L INAPTQAL GRPLIGNGADGAP Sbjct 76 FVQALNAGAGSYALAEAASVSPLQDALNLINAPTQALFGRPLIGNGADGAP 126 >gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331178|emb|CCC26860.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=632 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 93/127 (74%), Positives = 105/127 (83%), Gaps = 4/127 (3%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS++ V PE+V AAATDLA IGS+ISAANAAAAAPTTA++AAG DEVSAAIAALF HA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA----QVEQQLLAAINAPTQALLGRPLIG 116 AYQALSAQAA FH+QFV+ LA G +YA AEA V+Q LL INAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 117 NGADGAP 123 NGA+G P Sbjct 121 NGANGLP 127 >gi|289574445|ref|ZP_06454672.1| predicted protein [Mycobacterium tuberculosis K85] gi|289538876|gb|EFD43454.1| predicted protein [Mycobacterium tuberculosis K85] Length=524 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 93/127 (74%), Positives = 105/127 (83%), Gaps = 4/127 (3%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS++ V PE+V AAATDLA IGS+ISAANAAAAAPTTA++AAG DEVSAAIAALF HA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA----QVEQQLLAAINAPTQALLGRPLIG 116 AYQALSAQAA FH+QFV+ LA G +YA AEA V+Q LL INAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 117 NGADGAP 123 NGA+G P Sbjct 121 NGANGLP 127 >gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661576|ref|YP_001283099.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148822983|ref|YP_001287737.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 19 more sequence titles Length=618 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 93/127 (74%), Positives = 105/127 (83%), Gaps = 4/127 (3%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS++ V PE+V AAATDLA IGS+ISAANAAAAAPTTA++AAG DEVSAAIAALF HA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA----QVEQQLLAAINAPTQALLGRPLIG 116 AYQALSAQAA FH+QFV+ LA G +YA AEA V+Q LL INAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 117 NGADGAP 123 NGA+G P Sbjct 121 NGANGLP 127 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS V V PE+V AAA+D+A IGS AAN+ AA TT+VLAAGADEVSAAIA LF HA+ Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-------AQVEQQLLAAINAPTQALLGRP 113 YQA+S Q AAFH +FVQTL+ G+Y +AE A +E +L A+NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340626780|ref|YP_004745232.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|289543587|gb|EFD47235.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340004970|emb|CCC44118.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=624 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 93/127 (74%), Positives = 105/127 (83%), Gaps = 4/127 (3%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS++ V PE+V AAATDLA IGS+ISAANAAAAAPTTA++AAG DEVSAAIAALF HA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA----QVEQQLLAAINAPTQALLGRPLIG 116 AYQALSAQAA FH+QFV+ LA G +YA AEA V+Q LL INAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 117 NGADGAP 123 NGA+G P Sbjct 121 NGANGLP 127 >gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289420341|gb|EFD17542.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=592 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/127 (74%), Positives = 105/127 (83%), Gaps = 4/127 (3%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS++ V PE+V AAATDLA IGS+ISAANAAAAAPTTA++AAG DEVSAAIAALF HA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA----QVEQQLLAAINAPTQALLGRPLIG 116 AYQALSAQAA FH+QFV+ LA G +YA AEA V+Q LL INAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 117 NGADGAP 123 NGA+G P Sbjct 121 NGANGLP 127 >gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|224990154|ref|YP_002644841.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618548|emb|CAD94500.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|224773267|dbj|BAH26073.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601697|emb|CCC64370.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ] Length=624 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/127 (74%), Positives = 105/127 (83%), Gaps = 4/127 (3%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MS++ V PE+V AAATDLA IGS+ISAANAAAAAPTTA++AAG DEVSAAIAALF HA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAEA----QVEQQLLAAINAPTQALLGRPLIG 116 AYQALSAQAA FH+QFV+ LA G +YA AEA V+Q LL INAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 117 NGADGAP 123 NGA+G P Sbjct 121 NGANGLP 127 >gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=1303 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/124 (67%), Positives = 93/124 (75%), Gaps = 2/124 (1%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV PE++ AATDLA IGS I+AAN AAAA VL A ADEVS A+AALF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-AQVEQQLLAAINAPTQALLGRPLIGNGA 119 YQ +SAQ A FH +FVQTL+ A +Y AAE VEQ LLAA+NAPTQAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 DGAP 123 DG+P Sbjct 120 DGSP 123 >gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13880121|gb|AAK44830.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1306 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/124 (67%), Positives = 93/124 (75%), Gaps = 2/124 (1%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV PE++ AATDLA IGS I+AAN AAAA VL A ADEVS A+AALF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-AQVEQQLLAAINAPTQALLGRPLIGNGA 119 YQ +SAQ A FH +FVQTL+ A +Y AAE VEQ LLAA+NAPTQAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 DGAP 123 DG+P Sbjct 120 DGSP 123 >gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1306 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/124 (67%), Positives = 93/124 (75%), Gaps = 2/124 (1%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV PE++ AATDLA IGS I+AAN AAAA VL A ADEVS A+AALF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-AQVEQQLLAAINAPTQALLGRPLIGNGA 119 YQ +SAQ A FH +FVQTL+ A +Y AAE VEQ LLAA+NAPTQAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 DGAP 123 DG+P Sbjct 120 DGSP 123 >gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1306 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/124 (67%), Positives = 93/124 (75%), Gaps = 2/124 (1%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV PE++ AATDLA IGS I+AAN AAAA VL A ADEVS A+AALF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-AQVEQQLLAAINAPTQALLGRPLIGNGA 119 YQ +SAQ A FH +FVQTL+ A +Y AAE VEQ LLAA+NAPTQAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 DGAP 123 DG+P Sbjct 120 DGSP 123 >gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148821780|ref|YP_001286533.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|224988968|ref|YP_002643655.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] 7 more sequence titles Length=1306 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/124 (67%), Positives = 93/124 (75%), Gaps = 2/124 (1%) Query 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 MSFV PE++ AATDLA IGS I+AAN AAAA VL A ADEVS A+AALF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQALSAQAAAFHQQFVQTLAGGAGAYAAAE-AQVEQQLLAAINAPTQALLGRPLIGNGA 119 YQ +SAQ A FH +FVQTL+ A +Y AAE VEQ LLAA+NAPTQAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 DGAP 123 DG+P Sbjct 120 DGSP 123 Lambda K H 0.310 0.140 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1038195005428 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40