BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0125 Length=355 Score E Sequences producing significant alignments: (Bits) Value gi|15607267|ref|NP_214639.1| serine protease PepA [Mycobacterium... 684 0.0 gi|340625160|ref|YP_004743612.1| putative serine protease [Mycob... 682 0.0 gi|253797044|ref|YP_003030045.1| serine protease pepA [Mycobacte... 652 0.0 gi|289568019|ref|ZP_06448246.1| LOW QUALITY PROTEIN: serine prot... 645 0.0 gi|167970242|ref|ZP_02552519.1| serine protease pepA [Mycobacter... 628 5e-178 gi|183980355|ref|YP_001848646.1| serine protease PepA [Mycobacte... 579 2e-163 gi|240168112|ref|ZP_04746771.1| putative serine protease [Mycoba... 568 4e-160 gi|118619849|ref|YP_908181.1| serine protease PepA [Mycobacteriu... 555 3e-156 gi|15828433|ref|NP_302696.1| serine protease [Mycobacterium lepr... 474 9e-132 gi|296167291|ref|ZP_06849693.1| serine protease PepA [Mycobacter... 464 7e-129 gi|254777533|ref|ZP_05219049.1| PepA [Mycobacterium avium subsp.... 460 1e-127 gi|118465668|ref|YP_884304.1| trypsin [Mycobacterium avium 104] ... 459 4e-127 gi|41409625|ref|NP_962461.1| PepA [Mycobacterium avium subsp. pa... 456 2e-126 gi|342859465|ref|ZP_08716119.1| PepA [Mycobacterium colombiense ... 454 8e-126 gi|289441497|ref|ZP_06431241.1| serine protease pepA [Mycobacter... 452 5e-125 gi|254822400|ref|ZP_05227401.1| PepA [Mycobacterium intracellula... 434 8e-120 gi|333992824|ref|YP_004525438.1| serine protease PepA [Mycobacte... 390 2e-106 gi|300789371|ref|YP_003769662.1| serine protease [Amycolatopsis ... 270 2e-70 gi|118468378|ref|YP_890507.1| trypsin [Mycobacterium smegmatis s... 261 1e-67 gi|108801875|ref|YP_642072.1| peptidase S1 and S6, chymotrypsin/... 257 2e-66 gi|126437843|ref|YP_001073534.1| peptidase S1 and S6, chymotryps... 256 3e-66 gi|315446395|ref|YP_004079274.1| trypsin-like serine protease wi... 254 1e-65 gi|339293189|gb|AEJ45300.1| serine protease pepA [Mycobacterium ... 252 5e-65 gi|120406480|ref|YP_956309.1| PDZ/DHR/GLGF domain-containing pro... 252 6e-65 gi|145221870|ref|YP_001132548.1| PDZ/DHR/GLGF domain-containing ... 251 1e-64 gi|111021065|ref|YP_704037.1| serine protease [Rhodococcus josti... 236 4e-60 gi|226363367|ref|YP_002781149.1| S1C family peptidase [Rhodococc... 235 1e-59 gi|148273618|ref|YP_001223179.1| secreted serine protease [Clavi... 233 5e-59 gi|302527941|ref|ZP_07280283.1| predicted protein [Streptomyces ... 228 9e-58 gi|229492648|ref|ZP_04386451.1| trypsin [Rhodococcus erythropoli... 220 3e-55 gi|226303734|ref|YP_002763692.1| S1 family peptidase [Rhodococcu... 214 1e-53 gi|170782706|ref|YP_001711040.1| putative protease [Clavibacter ... 214 3e-53 gi|325675110|ref|ZP_08154796.1| serine protease [Rhodococcus equ... 198 1e-48 gi|312137738|ref|YP_004005074.1| serine peptidase [Rhodococcus e... 198 1e-48 gi|54027199|ref|YP_121441.1| putative protease [Nocardia farcini... 194 2e-47 gi|332671091|ref|YP_004454099.1| PDZ/DHR/GLGF domain-containing ... 190 4e-46 gi|258654784|ref|YP_003203940.1| peptidase S1 and S6 chymotrypsi... 186 4e-45 gi|331696262|ref|YP_004332501.1| PDZ/DHR/GLGF domain-containing ... 179 9e-43 gi|339293190|gb|AEJ45301.1| serine protease pepA [Mycobacterium ... 178 1e-42 gi|336321368|ref|YP_004601336.1| PDZ/DHR/GLGF domain-containing ... 178 1e-42 gi|297625432|ref|YP_003687195.1| secreted serine protease, tryps... 177 2e-42 gi|256371362|ref|YP_003109186.1| PDZ/DHR/GLGF domain-containing ... 174 2e-41 gi|309811136|ref|ZP_07704933.1| trypsin [Dermacoccus sp. Ellin18... 169 5e-40 gi|326334041|ref|ZP_08200270.1| putative serine protease [Nocard... 164 3e-38 gi|289705249|ref|ZP_06501648.1| trypsin [Micrococcus luteus SK58... 159 5e-37 gi|239918048|ref|YP_002957606.1| trypsin-like serine protease wi... 154 3e-35 gi|336178408|ref|YP_004583783.1| peptidase S1 and S6 chymotrypsi... 153 3e-35 gi|256371520|ref|YP_003109344.1| peptidase S1 and S6 chymotrypsi... 153 4e-35 gi|269929247|ref|YP_003321568.1| HtrA2 peptidase [Sphaerobacter ... 147 2e-33 gi|240169346|ref|ZP_04748005.1| heat shock protein HtrA, putativ... 145 7e-33 >gi|15607267|ref|NP_214639.1| serine protease PepA [Mycobacterium tuberculosis H37Rv] gi|15839506|ref|NP_334543.1| serine protease, putative [Mycobacterium tuberculosis CDC1551] gi|31791304|ref|NP_853797.1| serine protease PepA [Mycobacterium bovis AF2122/97] 68 more sequence titles Length=355 Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/355 (100%), Positives = 355/355 (100%), Gaps = 0/355 (0%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG Sbjct 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 Query 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG Sbjct 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 Query 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV Sbjct 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 Query 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA Sbjct 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 Query 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST 300 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST Sbjct 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST 300 Query 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA Sbjct 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 >gi|340625160|ref|YP_004743612.1| putative serine protease [Mycobacterium canettii CIPT 140010059] gi|340003350|emb|CCC42469.1| putative serine protease PEPA (serine proteinase) (MTB32A) [Mycobacterium canettii CIPT 140010059] Length=355 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/355 (99%), Positives = 355/355 (100%), Gaps = 0/355 (0%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 MSNSRRR+LRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG Sbjct 1 MSNSRRRALRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 Query 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG Sbjct 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 Query 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV Sbjct 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 Query 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA Sbjct 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 Query 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST 300 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARV+RVVGSAPAASLGIST Sbjct 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVERVVGSAPAASLGIST 300 Query 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA Sbjct 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 >gi|253797044|ref|YP_003030045.1| serine protease pepA [Mycobacterium tuberculosis KZN 1435] gi|253318547|gb|ACT23150.1| serine protease pepA [Mycobacterium tuberculosis KZN 1435] Length=342 Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/342 (99%), Positives = 342/342 (100%), Gaps = 0/342 (0%) Query 14 LLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN 73 +LSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN Sbjct 1 MLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN 60 Query 74 NAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLR 133 NAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLR Sbjct 61 NAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLR 120 Query 134 GAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETL 193 GAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETL Sbjct 121 GAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETL 180 Query 194 NGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQI 253 NGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQI Sbjct 181 NGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQI 240 Query 254 RSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPIN 313 RSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPIN Sbjct 241 RSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPIN 300 Query 314 SATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 SATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA Sbjct 301 SATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 342 >gi|289568019|ref|ZP_06448246.1| LOW QUALITY PROTEIN: serine protease pepA [Mycobacterium tuberculosis T17] gi|289541772|gb|EFD45421.1| LOW QUALITY PROTEIN: serine protease pepA [Mycobacterium tuberculosis T17] Length=335 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG Sbjct 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 Query 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG Sbjct 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 Query 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV Sbjct 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 Query 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA Sbjct 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 Query 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST 300 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST Sbjct 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST 300 Query 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTW 335 GDVITAVDGAPINSATAMADALNGHHPGDVISVTW Sbjct 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTW 335 >gi|167970242|ref|ZP_02552519.1| serine protease pepA [Mycobacterium tuberculosis H37Ra] Length=328 Score = 628 bits (1619), Expect = 5e-178, Method: Compositional matrix adjust. Identities = 327/327 (100%), Positives = 327/327 (100%), Gaps = 0/327 (0%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG Sbjct 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVG 60 Query 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG Sbjct 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 Query 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV Sbjct 121 YDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 Query 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA Sbjct 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFA 240 Query 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST 300 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST Sbjct 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGIST 300 Query 301 GDVITAVDGAPINSATAMADALNGHHP 327 GDVITAVDGAPINSATAMADALNGHHP Sbjct 301 GDVITAVDGAPINSATAMADALNGHHP 327 >gi|183980355|ref|YP_001848646.1| serine protease PepA [Mycobacterium marinum M] gi|183173681|gb|ACC38791.1| serine protease PepA [Mycobacterium marinum M] Length=357 Score = 579 bits (1493), Expect = 2e-163, Method: Compositional matrix adjust. Identities = 296/357 (83%), Positives = 326/357 (92%), Gaps = 2/357 (0%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLAT--APAQAAPPALSQDRFADFPALPLDPSAMVAQ 58 MS R S RWSWL++VLA +GLGLAT APA AAP L+ DRFADFP LPLDPSAMVAQ Sbjct 1 MSKLRHHSPRWSWLVAVLAVLGLGLATVPAPALAAPSNLALDRFADFPTLPLDPSAMVAQ 60 Query 59 VGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDV 118 VGPQVVN+NTKLGYNNAVGAGTGI+IDP GVVLTNNHVI+GATDI+ FSVG G+TYGVDV Sbjct 61 VGPQVVNVNTKLGYNNAVGAGTGIIIDPAGVVLTNNHVISGATDISVFSVGDGRTYGVDV 120 Query 119 VGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQ 178 VGYDRT+DVAVLQ+RGAGGLP+AAIGGGV+VGEP+VAMGN+GGQGGTPRAVPGRVVAL Q Sbjct 121 VGYDRTRDVAVLQMRGAGGLPAAAIGGGVSVGEPIVAMGNTGGQGGTPRAVPGRVVALDQ 180 Query 179 TVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQG 238 TV+ASD+LTGAEETLNGLIQ DAAI PGDSGGP+VN +GQVVGMNTAASDNFQ+S GG G Sbjct 181 TVEASDALTGAEETLNGLIQVDAAIAPGDSGGPIVNNMGQVVGMNTAASDNFQMSGGGTG 240 Query 239 FAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGI 298 FAIPIGQAM IAGQIRSGGGSPTVHIGPTAFLGLGVVDNNG GA+V RVVGSAPAA +GI Sbjct 241 FAIPIGQAMGIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGTGAKVARVVGSAPAAVVGI 300 Query 299 STGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 STGD+ITA+ GAPINSATAM+DALNGHHPGD++S++W + SGG RT NVTLAEGPPA Sbjct 301 STGDIITALGGAPINSATAMSDALNGHHPGDIVSISWTSNSGGQRTENVTLAEGPPA 357 >gi|240168112|ref|ZP_04746771.1| putative serine protease [Mycobacterium kansasii ATCC 12478] Length=357 Score = 568 bits (1464), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 292/357 (82%), Positives = 328/357 (92%), Gaps = 2/357 (0%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPA--LSQDRFADFPALPLDPSAMVAQ 58 MS R R +RWSWL++++A +GLGLAT PA A+ + DRFAD+P+LPLDPSA+V Q Sbjct 1 MSKDRHRPVRWSWLVAIVAVLGLGLATPPAPASAAPSTFALDRFADYPSLPLDPSALVGQ 60 Query 59 VGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDV 118 VGPQ+VNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVI+GATDI+AF VG+GQTYGVDV Sbjct 61 VGPQIVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVISGATDISAFDVGNGQTYGVDV 120 Query 119 VGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQ 178 VGYDRTQD+AVLQLRGAGGLP+AAIGGGV++GEP+VA+GN+GGQGGTPRAVPGRVVAL Q Sbjct 121 VGYDRTQDIAVLQLRGAGGLPTAAIGGGVSIGEPIVALGNTGGQGGTPRAVPGRVVALNQ 180 Query 179 TVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQG 238 TVQASD+LTGAEETLNGLIQ DAAI+PGDSGGP+VN GQVVG+NTAASDNFQLSQGGQG Sbjct 181 TVQASDALTGAEETLNGLIQVDAAIRPGDSGGPIVNSQGQVVGINTAASDNFQLSQGGQG 240 Query 239 FAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGI 298 FAIPIGQAMAIA QIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVG+APAAS+GI Sbjct 241 FAIPIGQAMAIANQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGTAPAASIGI 300 Query 299 STGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 S GDV+TAVDG I+SATA++D LNGHHPGDV+S++W +KSG RT NVTLAEGPPA Sbjct 301 SNGDVVTAVDGIAISSATALSDVLNGHHPGDVVSISWLSKSGVARTENVTLAEGPPA 357 >gi|118619849|ref|YP_908181.1| serine protease PepA [Mycobacterium ulcerans Agy99] gi|118571959|gb|ABL06710.1| serine protease PepA [Mycobacterium ulcerans Agy99] Length=343 Score = 555 bits (1431), Expect = 3e-156, Method: Compositional matrix adjust. Identities = 285/343 (84%), Positives = 315/343 (92%), Gaps = 2/343 (0%) Query 15 LSVLAAVGLGLAT--APAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGY 72 ++VLA +GLGLAT APA AA L+ DRFADFP LPLDPSAMVAQVGPQVVN+NTKLGY Sbjct 1 MAVLAVLGLGLATVPAPAHAASSNLALDRFADFPTLPLDPSAMVAQVGPQVVNVNTKLGY 60 Query 73 NNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQL 132 NNAVGAGTGI+IDP GVVLTNNHVI+GATDI+ FSVG G+TYGVDVVGYDRT+DVAVLQ+ Sbjct 61 NNAVGAGTGIIIDPAGVVLTNNHVISGATDISVFSVGDGRTYGVDVVGYDRTRDVAVLQM 120 Query 133 RGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEET 192 RGAGGLP+AAIGGGV+VGEP+VAMGN+GGQGGTPRAVPGRVVAL QTV+ASD+LTGAEET Sbjct 121 RGAGGLPAAAIGGGVSVGEPIVAMGNTGGQGGTPRAVPGRVVALDQTVEASDALTGAEET 180 Query 193 LNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQ 252 LNGLIQ DAAI PGDSGGP+VN +GQVVGMNTAASDNFQ+S GG GFAIPIGQAM IAGQ Sbjct 181 LNGLIQVDAAIAPGDSGGPIVNNMGQVVGMNTAASDNFQMSGGGTGFAIPIGQAMGIAGQ 240 Query 253 IRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPI 312 IRSGGGSPTVHIGPTAFLGLGVVDNN GA+V RVVGSAPAA +GISTGD+ITA+ GAPI Sbjct 241 IRSGGGSPTVHIGPTAFLGLGVVDNNDTGAKVARVVGSAPAAVVGISTGDIITALGGAPI 300 Query 313 NSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 NSATAM+DALNGHHPGD++S++W + SGG RT NVTLAEGPPA Sbjct 301 NSATAMSDALNGHHPGDIVSISWTSSSGGQRTENVTLAEGPPA 343 >gi|15828433|ref|NP_302696.1| serine protease [Mycobacterium leprae TN] gi|221230910|ref|YP_002504326.1| putative secreted serine protease [Mycobacterium leprae Br4923] gi|13093863|emb|CAC32191.1| probable secreted serine protease [Mycobacterium leprae] gi|219934017|emb|CAR72759.1| probable secreted serine protease [Mycobacterium leprae Br4923] Length=354 Score = 474 bits (1220), Expect = 9e-132, Method: Compositional matrix adjust. Identities = 250/358 (70%), Positives = 292/358 (82%), Gaps = 7/358 (1%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPP---ALSQDRFADFPALPLDPSAMVA 57 MS RSL SWL+S LAA+GL LA P A P L+ DRF++ P LPL+P+AMVA Sbjct 1 MSRQPHRSLWRSWLVSTLAALGLSLAVVPGSATPSGPSTLALDRFSNRPPLPLNPAAMVA 60 Query 58 QVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVD 117 PQVVNI+T+LGYN+AVGAGTGIVID +GVVLTNNHVI+GATDI+AF VG+G+TYGVD Sbjct 61 ---PQVVNISTRLGYNSAVGAGTGIVIDSSGVVLTNNHVISGATDISAFDVGNGKTYGVD 117 Query 118 VVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALG 177 VVGYDRTQDVAVLQLRGA LP+A IGG VA+GEP+VA+GN+GGQGG P +PGRVVAL Sbjct 118 VVGYDRTQDVAVLQLRGASNLPTAVIGGDVAIGEPIVALGNTGGQGGLPSVLPGRVVALN 177 Query 178 QTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ 237 QTVQAS+ LTGA+ETL+GLIQ DA I+PGDSGGPVVN GQVVGMNTAA+DN+++ GGQ Sbjct 178 QTVQASEPLTGAQETLSGLIQVDAPIKPGDSGGPVVNSRGQVVGMNTAATDNYKM-LGGQ 236 Query 238 GFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLG 297 GFAIPIGQAM + G IRSG GS TVHIGPTAF GLGV+DNNGNGARV RVV + PAA G Sbjct 237 GFAIPIGQAMEVVGAIRSGAGSNTVHIGPTAFFGLGVLDNNGNGARVARVVATGPAAMAG 296 Query 298 ISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 IS GD+IT+VDG PI+ ATAM + L HHPG+ ++V +++ GG T NVTLAEGPPA Sbjct 297 ISVGDIITSVDGVPISEATAMTNVLVPHHPGETVAVNYRSAGGGDLTANVTLAEGPPA 354 >gi|296167291|ref|ZP_06849693.1| serine protease PepA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897235|gb|EFG76839.1| serine protease PepA [Mycobacterium parascrofulaceum ATCC BAA-614] Length=349 Score = 464 bits (1195), Expect = 7e-129, Method: Compositional matrix adjust. Identities = 247/334 (74%), Positives = 280/334 (84%), Gaps = 8/334 (2%) Query 22 GLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTG 81 GLGL APA A+P +Q P PLDP+A+V QVGPQVVNINTK GYNNAVGAGTG Sbjct 24 GLGLGIAPAAASP--FTQ------PRAPLDPAALVGQVGPQVVNINTKFGYNNAVGAGTG 75 Query 82 IVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSA 141 IVIDPNGVVLTNNHVI+GATDI+AF VG+GQTY VDVVGYDRTQDVAVLQLRGA GLP+A Sbjct 76 IVIDPNGVVLTNNHVISGATDISAFDVGNGQTYAVDVVGYDRTQDVAVLQLRGAAGLPTA 135 Query 142 AIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDA 201 AIGGGVAVGEPVVAMGN+GGQGGTP AV G+V+AL QTV A+D+LTGA E+L GLIQ D Sbjct 136 AIGGGVAVGEPVVAMGNAGGQGGTPSAVSGKVIALNQTVSATDTLTGANESLGGLIQADT 195 Query 202 AIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPT 261 I+PGDSGGP+VN GQVVG+NTAA+DN+++S GGQGFAIPIG+AM +AGQIRSG GS T Sbjct 196 PIRPGDSGGPLVNNQGQVVGVNTAATDNYKMSGGGQGFAIPIGRAMGVAGQIRSGAGSNT 255 Query 262 VHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADA 321 VH+GPTAFLGLGV D++GNGARV+RVV S PAA+ GIS GDVITAVD PIN AT+M D Sbjct 256 VHVGPTAFLGLGVTDSDGNGARVERVVTSGPAAAAGISPGDVITAVDNVPINGATSMTDV 315 Query 322 LNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 L HHPGD I+V +++ GG RT V LAEGPPA Sbjct 316 LVPHHPGDTIAVHYRSAGGGDRTAIVALAEGPPA 349 >gi|254777533|ref|ZP_05219049.1| PepA [Mycobacterium avium subsp. avium ATCC 25291] Length=360 Score = 460 bits (1184), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 256/361 (71%), Positives = 296/361 (82%), Gaps = 7/361 (1%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLAT------APAQAAPPALSQDRFADFPALPLDPSA 54 MS S RS+ WSWL+ VL VGLGL APA AAP L+ DRFAD P P+DPSA Sbjct 1 MSKSHHRSVWWSWLVGVLTVVGLGLGLGSGVGLAPASAAPSGLALDRFADRPLAPIDPSA 60 Query 55 MVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTY 114 MV QVGPQVVNI+TK GYNNAVGAGTGIVIDPNGVVLTNNHVI+GAT+I+AF VG+GQTY Sbjct 61 MVGQVGPQVVNIDTKFGYNNAVGAGTGIVIDPNGVVLTNNHVISGATEISAFDVGNGQTY 120 Query 115 GVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVV 174 VDVVGYDRTQD+AVLQLRGA GLP+A IGG VGEP+VA+GN GGQGGTP AV G+VV Sbjct 121 AVDVVGYDRTQDIAVLQLRGATGLPTATIGGEATVGEPIVALGNVGGQGGTPNAVAGKVV 180 Query 175 ALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQ 234 AL Q+V A+D+LTGA+E L GLIQ DA I+PGDSGGP+VN GQV+G++TAA+D++++S Sbjct 181 ALNQSVSATDTLTGAQENLGGLIQADAPIKPGDSGGPMVNSAGQVIGVDTAATDSYKMS- 239 Query 235 GGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAA 294 GGQGFAIPIG+AMA+A QIRSG GS TVHIGPTAFLGLGV DNNGNGARVQRVV + PAA Sbjct 240 GGQGFAIPIGRAMAVANQIRSGAGSNTVHIGPTAFLGLGVTDNNGNGARVQRVVNTGPAA 299 Query 295 SLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPP 354 + GI+ GDVIT VD PIN AT+M + L HHPGD I+V +++ GG RT N+TLAEGPP Sbjct 300 AAGIAPGDVITGVDTVPINGATSMTEVLVPHHPGDTIAVHFRSVDGGERTANITLAEGPP 359 Query 355 A 355 A Sbjct 360 A 360 >gi|118465668|ref|YP_884304.1| trypsin [Mycobacterium avium 104] gi|118166955|gb|ABK67852.1| Trypsin [Mycobacterium avium 104] Length=371 Score = 459 bits (1180), Expect = 4e-127, Method: Compositional matrix adjust. Identities = 257/362 (71%), Positives = 297/362 (83%), Gaps = 8/362 (2%) Query 1 MSNSRR-RSLRWSWLLSVLAAVGLGLAT------APAQAAPPALSQDRFADFPALPLDPS 53 MS S RS+ WSWL+ VL VGLGL APA AAP L+ DRFAD P P+DPS Sbjct 11 MSKSHHHRSVWWSWLVGVLTVVGLGLGLGSGVGLAPASAAPSGLALDRFADRPLAPIDPS 70 Query 54 AMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQT 113 AMV QVGPQVVNI+TK GYNNAVGAGTGIVIDPNGVVLTNNHVI+GAT+I+AF VG+GQT Sbjct 71 AMVGQVGPQVVNIDTKFGYNNAVGAGTGIVIDPNGVVLTNNHVISGATEISAFDVGNGQT 130 Query 114 YGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRV 173 Y VDVVGYDRTQD+AVLQLRGA GLP+A IGG VGEP+VA+GN GGQGGTP AV G+V Sbjct 131 YAVDVVGYDRTQDIAVLQLRGAAGLPTATIGGEATVGEPIVALGNVGGQGGTPNAVAGKV 190 Query 174 VALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLS 233 VAL Q+V A+D+LTGA+E L GLIQ DA I+PGDSGGP+VNG GQV+G++TAA+D++++S Sbjct 191 VALNQSVSATDTLTGAQENLGGLIQADAPIKPGDSGGPMVNGAGQVIGVDTAATDSYKMS 250 Query 234 QGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPA 293 GGQGFAIPIG+AMA+A QIRSG GS TVHIGPTAFLGLGV DNNGNGARVQRVV + PA Sbjct 251 -GGQGFAIPIGRAMAVANQIRSGAGSNTVHIGPTAFLGLGVTDNNGNGARVQRVVNTGPA 309 Query 294 ASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 A+ GI+ GDVIT VD PIN AT+M + L HHPGD I+V +++ GG RT N+TLAEGP Sbjct 310 AAAGIAPGDVITGVDTVPINGATSMTEVLVPHHPGDTIAVHFRSVDGGERTANITLAEGP 369 Query 354 PA 355 PA Sbjct 370 PA 371 >gi|41409625|ref|NP_962461.1| PepA [Mycobacterium avium subsp. paratuberculosis K-10] gi|505551|emb|CAA80638.1| 34KDa protein [Mycobacterium avium subsp. paratuberculosis] gi|41398456|gb|AAS06077.1| PepA [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459938|gb|EGO38850.1| trypsin-like serine protease with C-terminal PDZ domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=361 Score = 456 bits (1174), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 256/362 (71%), Positives = 296/362 (82%), Gaps = 8/362 (2%) Query 1 MSNSRR-RSLRWSWLLSVLAAVGLGLAT------APAQAAPPALSQDRFADFPALPLDPS 53 MS S RS+ WSWL+ VL VGLGL APA AAP L+ DRFAD P P+DPS Sbjct 1 MSKSHHHRSVWWSWLVGVLTVVGLGLGLGSGVGLAPASAAPSGLALDRFADRPLAPIDPS 60 Query 54 AMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQT 113 AMV QVGPQVVNI+TK GYNNAVGAGTGIVIDPNGVVLTNNHVI+GAT+I+AF VG+GQT Sbjct 61 AMVGQVGPQVVNIDTKFGYNNAVGAGTGIVIDPNGVVLTNNHVISGATEISAFDVGNGQT 120 Query 114 YGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRV 173 Y VDVVGYDRTQD+AVLQLRGA GLP+A IGG VGEP+VA+GN GGQGGTP AV G+V Sbjct 121 YAVDVVGYDRTQDIAVLQLRGAAGLPTATIGGEATVGEPIVALGNVGGQGGTPNAVAGKV 180 Query 174 VALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLS 233 VAL Q+V A+D+LTGA+E L GLIQ DA I+PGDSGGP+VN GQV+G++TAA+D++++S Sbjct 181 VALNQSVSATDTLTGAQENLGGLIQADAPIKPGDSGGPMVNSAGQVIGVDTAATDSYKMS 240 Query 234 QGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPA 293 GGQGFAIPIG+AMA+A QIRSG GS TVHIGPTAFLGLGV DNNGNGARVQRVV + PA Sbjct 241 -GGQGFAIPIGRAMAVANQIRSGAGSNTVHIGPTAFLGLGVTDNNGNGARVQRVVNTGPA 299 Query 294 ASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 A+ GI+ GDVIT VD PIN AT+M + L HHPGD I+V +++ GG RT N+TLAEGP Sbjct 300 AAAGIAPGDVITGVDTVPINGATSMTEVLVPHHPGDTIAVHFRSVDGGERTANITLAEGP 359 Query 354 PA 355 PA Sbjct 360 PA 361 >gi|342859465|ref|ZP_08716119.1| PepA [Mycobacterium colombiense CECT 3035] gi|342133706|gb|EGT86909.1| PepA [Mycobacterium colombiense CECT 3035] Length=360 Score = 454 bits (1169), Expect = 8e-126, Method: Compositional matrix adjust. Identities = 250/361 (70%), Positives = 292/361 (81%), Gaps = 7/361 (1%) Query 1 MSNSRRRSLRWSWLLSVLAAVGLGLAT------APAQAAPPALSQDRFADFPALPLDPSA 54 MS S+ R + WSWL+SVL VGLGL APA AP + DRF D P PLDPSA Sbjct 1 MSKSQHRPVLWSWLVSVLTVVGLGLGLGSGVGLAPASGAPSNFALDRFTDRPQAPLDPSA 60 Query 55 MVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTY 114 MV QVGPQVVNI+TK GYNNAVGAGTGIVIDPNGVVLTNNHVI+GATDI+AF VG+GQTY Sbjct 61 MVGQVGPQVVNIDTKFGYNNAVGAGTGIVIDPNGVVLTNNHVISGATDISAFDVGNGQTY 120 Query 115 GVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVV 174 VDVVGYDRTQD+AVLQLRGA GLP+AAIGG VGEP+VA+GN GQGGTP AV G+VV Sbjct 121 AVDVVGYDRTQDIAVLQLRGASGLPTAAIGGEATVGEPIVALGNVNGQGGTPNAVTGKVV 180 Query 175 ALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQ 234 AL Q+V A+D+LTGA+E+L GLIQ DA I+PGDSGGP+VN GQV+G++TAA+D++++S Sbjct 181 ALNQSVSATDTLTGAQESLGGLIQADAPIKPGDSGGPMVNNAGQVIGVDTAATDSYKMS- 239 Query 235 GGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAA 294 GGQGFAIPIG+AM +AGQIRSG GS TVHIGPTAFLGLGV+DNNG GARVQRVV + PA Sbjct 240 GGQGFAIPIGRAMGVAGQIRSGAGSNTVHIGPTAFLGLGVMDNNGTGARVQRVVNAGPAG 299 Query 295 SLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPP 354 + GI+ GD+IT VD I AT+M + L HHPGD I+V +++ GG RT N+TLAEGPP Sbjct 300 AAGIAPGDLITGVDNVAITGATSMTEVLVPHHPGDTIAVHYRSNDGGERTANITLAEGPP 359 Query 355 A 355 A Sbjct 360 A 360 >gi|289441497|ref|ZP_06431241.1| serine protease pepA [Mycobacterium tuberculosis T46] gi|289414416|gb|EFD11656.1| serine protease pepA [Mycobacterium tuberculosis T46] Length=238 Score = 452 bits (1162), Expect = 5e-125, Method: Compositional matrix adjust. Identities = 237/238 (99%), Positives = 238/238 (100%), Gaps = 0/238 (0%) Query 118 VVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALG 177 +VGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALG Sbjct 1 MVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALG 60 Query 178 QTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ 237 QTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ Sbjct 61 QTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ 120 Query 238 GFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLG 297 GFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLG Sbjct 121 GFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLG 180 Query 298 ISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 ISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA Sbjct 181 ISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 238 >gi|254822400|ref|ZP_05227401.1| PepA [Mycobacterium intracellulare ATCC 13950] Length=348 Score = 434 bits (1117), Expect = 8e-120, Method: Compositional matrix adjust. Identities = 236/341 (70%), Positives = 277/341 (82%), Gaps = 16/341 (4%) Query 15 LSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNN 74 L + A +GLG+ATA PALPLDPSAMV QVGPQVVNI+TK GYNN Sbjct 24 LGLDAGIGLGMATASP---------------PALPLDPSAMVGQVGPQVVNIDTKFGYNN 68 Query 75 AVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRG 134 AVGAGTGIVIDPNGVVLTNNHVI+GATDI+AF+VG+GQTY VDVVGYDRTQD+AVLQLRG Sbjct 69 AVGAGTGIVIDPNGVVLTNNHVISGATDISAFAVGNGQTYAVDVVGYDRTQDIAVLQLRG 128 Query 135 AGGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLN 194 A GLP+AAIGG VGEP+VA+GN+GGQGGTP AV G+V+AL Q+V A+D+LTGA+E L Sbjct 129 AAGLPTAAIGGEARVGEPIVALGNAGGQGGTPSAVTGKVLALNQSVSATDTLTGAQENLG 188 Query 195 GLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQIR 254 GLIQ DA I+PGDSGGP+VN GQV+G++TAA+D++++S GGQGFAIPIG+AM +A QIR Sbjct 189 GLIQADAPIRPGDSGGPMVNSAGQVIGVDTAATDSYKMS-GGQGFAIPIGRAMGVANQIR 247 Query 255 SGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINS 314 SG GS TVHIGPTAFLGLGV+DNNGNGARVQRVV PA + GI+ GDVIT VD I Sbjct 248 SGAGSNTVHIGPTAFLGLGVMDNNGNGARVQRVVNGGPAGAAGIAAGDVITGVDNVAITG 307 Query 315 ATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 AT+M + L HHPGD I+V +++ GG RT N+TLAEGPPA Sbjct 308 ATSMTEVLVPHHPGDTIAVHYRSTDGGDRTANITLAEGPPA 348 >gi|333992824|ref|YP_004525438.1| serine protease PepA [Mycobacterium sp. JDM601] gi|333488792|gb|AEF38184.1| serine protease PepA [Mycobacterium sp. JDM601] Length=321 Score = 390 bits (1002), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 205/328 (63%), Positives = 254/328 (78%), Gaps = 13/328 (3%) Query 29 PAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNG 88 P QAAP PA PLDPSAMVAQVGP VVNI+ ++GY +AVGAGTGIV+DP+G Sbjct 2 PVQAAP---------TLPAPPLDPSAMVAQVGPAVVNIDAQMGYQSAVGAGTGIVLDPSG 52 Query 89 VVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIG--GG 146 +VLTNNHV+AGAT + SVG+GQ+Y VDV+G+DR+ DVAVLQLRGA GLPSA IG Sbjct 53 IVLTNNHVVAGATSLTVVSVGNGQSYDVDVLGFDRSHDVAVLQLRGASGLPSANIGDSSK 112 Query 147 VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPG 206 VA+G+PVVAMGN+GGQGGTP AVPG+V+ L QTV A+D LTG ETL +I+ D AI+PG Sbjct 113 VAIGDPVVAMGNAGGQGGTPSAVPGKVIGLNQTVSAADELTGNTETLTNMIKADTAIRPG 172 Query 207 DSGGPVVNGLGQVVGMNTAASDNFQLSQ-GGQGFAIPIGQAMAIAGQIRSGGGSPTVHIG 265 DSGGP+VN GQV+GMNTAASDN++ +Q GG+G+AIPI QAMAIAGQIR+G SPTVHIG Sbjct 173 DSGGPMVNAAGQVIGMNTAASDNYKFAQPGGEGYAIPINQAMAIAGQIRAGISSPTVHIG 232 Query 266 PTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGH 325 TAF+G+GVVD+NG ARV +V+ PAA GI+ D+IT+V+G P+NS T + D L+ Sbjct 233 ETAFMGVGVVDSNG-AARVAQVLEGTPAAESGIARDDIITSVNGRPVNSPTDLTDVLDQR 291 Query 326 HPGDVISVTWQTKSGGTRTGNVTLAEGP 353 HPGD I+++W+T G + +TL GP Sbjct 292 HPGDTITLSWRTPMGSEHSATITLVPGP 319 >gi|300789371|ref|YP_003769662.1| serine protease [Amycolatopsis mediterranei U32] gi|299798885|gb|ADJ49260.1| putative serine protease [Amycolatopsis mediterranei U32] gi|340531018|gb|AEK46223.1| serine protease [Amycolatopsis mediterranei S699] Length=458 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 162/311 (53%), Positives = 212/311 (69%), Gaps = 8/311 (2%) Query 50 LDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVG 109 LD A+ A+V P +VNINT+LG A AGTGIV+ +G VLTNNHV+AGAT I S+G Sbjct 147 LDADAVSAKVNPAIVNINTELGLQGAAAAGTGIVLTADGEVLTNNHVVAGATSIKVTSIG 206 Query 110 SGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIG--GGVAVGEPVVAMGNSGGQGGTPR 167 +G TY VVGYDR +DVAVLQL+GA GLP+A+IG V VG+ ++ +GN+GG+GG P Sbjct 207 TGDTYKAQVVGYDRAEDVAVLQLQGASGLPTASIGDSSAVQVGDQILGLGNAGGRGGNPV 266 Query 168 AVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAAS 227 PG V AL Q++ ASD +G+ E L GLIQ A I+ GDSGGP+VN QV+G++TAAS Sbjct 267 PAPGTVTALNQSITASDESSGSSEQLTGLIQVRANIESGDSGGPLVNANAQVIGVDTAAS 326 Query 228 DNFQLS-----QGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGA 282 +QL+ GQGFAIPI QA+ IA +I +G S +HIG TAF+G+ V D G GA Sbjct 327 TGYQLNGRRSGGAGQGFAIPINQAVDIAHKIVAGQASDKIHIGKTAFIGVSVTDGQG-GA 385 Query 283 RVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGT 342 +V+ VV PA G++ GDVITA+DG P SATA+ + ++ HHPGD +++T +GG Sbjct 386 KVREVVQRGPAQKAGLAAGDVITAIDGKPTGSATALTNVMDTHHPGDRLTLTVAGAAGGQ 445 Query 343 RTGNVTLAEGP 353 + V EGP Sbjct 446 QQLQVNAIEGP 456 >gi|118468378|ref|YP_890507.1| trypsin [Mycobacterium smegmatis str. MC2 155] gi|118169665|gb|ABK70561.1| Trypsin [Mycobacterium smegmatis str. MC2 155] Length=340 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 146/293 (50%), Positives = 195/293 (67%), Gaps = 6/293 (2%) Query 65 NINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRT 124 I+T + Y A G GTG V+ PNG VLTN HV+ GA INA +G ++ D+VGY+R Sbjct 50 RIDTVVDYQQAYGVGTGFVLSPNGEVLTNYHVVQGANTINATV--NGASFMADLVGYNRR 107 Query 125 QDVAVLQLRGAGGLPSAAIGGGVAV--GEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQA 182 D+AVLQLRGAGGLP+A+IG ++ GEPVVA+GN+ G G V A G+TV A Sbjct 108 ADIAVLQLRGAGGLPTASIGDSRSLVEGEPVVALGNAYGSNAPLTREVGTVTAFGRTVNA 167 Query 183 SDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIP 242 DSLTG ++ L GLI+F A ++ GDSGGPVV+G GQVVG+ TAAS NF++ GG+GFAIP Sbjct 168 EDSLTGTKDELTGLIEFAAPVRAGDSGGPVVDGAGQVVGVTTAASVNFRMGPGGKGFAIP 227 Query 243 IGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGV--VDNNGNGARVQRVVGSAPAASLGIST 300 I AMA+A QIRS SP VHIGP LG+GV +G G +Q V+ PA + G+ Sbjct 228 INDAMAVANQIRSRTPSPEVHIGPPTLLGVGVRTAQRSGGGVIIQDVLRGGPAEAAGLVP 287 Query 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 GD++ +++G +++A + L+ H+PGDV+ +TW+ + G R G TLA GP Sbjct 288 GDILMSIEGTLLDTARTLTLVLDQHYPGDVVDLTWRDRGGFDRNGKATLAAGP 340 >gi|108801875|ref|YP_642072.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. MCS] gi|119871028|ref|YP_940980.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. KMS] gi|108772294|gb|ABG11016.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. MCS] gi|119697117|gb|ABL94190.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. KMS] Length=341 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 149/299 (50%), Positives = 197/299 (66%), Gaps = 6/299 (2%) Query 59 VGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDV 118 V P V I+T++ Y +A+G GTGIV+DP G VLTN HV+ GA +N +G++Y ++ Sbjct 45 VEPAVARIDTEIDYQSAIGTGTGIVLDPGGQVLTNFHVVQGADRVNVAV--AGRSYPAEL 102 Query 119 VGYDRTQDVAVLQLRGAGGLPSAAIG--GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVAL 176 VGYDR +D+AV+QL GAGGLP A IG +A GEPVVA+GN+ G G V A Sbjct 103 VGYDRGRDIAVIQLLGAGGLPVAPIGDSAALAAGEPVVALGNAQGSAAPLTREVGSVTAF 162 Query 177 GQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGG 236 G+TVQA DSLTG+ + L GLI+F A ++ GDSGGPVVN GQVVG+ TAAS N+++ GG Sbjct 163 GRTVQAEDSLTGSSDELTGLIEFAAPVRAGDSGGPVVNSAGQVVGITTAASVNYRMGPGG 222 Query 237 QGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGV--VDNNGNGARVQRVVGSAPAA 294 +GFAIPI +A+ +A QIRS S TVHIGP A LG+GV ++ G +Q V+ PA Sbjct 223 KGFAIPINEAVGVANQIRSRIPSDTVHIGPPALLGVGVRTAPSDVPGVLIQEVLRGGPAE 282 Query 295 SLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 + G+ DV+ A++G + SAT + L+ +PGDV+ VTW G RT TLA GP Sbjct 283 AAGLMDRDVLIAINGNRLTSATQLTYTLDRFYPGDVVDVTWIDGFGQERTAKATLAPGP 341 >gi|126437843|ref|YP_001073534.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS] gi|126237643|gb|ABO01044.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS] Length=341 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 149/299 (50%), Positives = 197/299 (66%), Gaps = 6/299 (2%) Query 59 VGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDV 118 V P V I+T++ Y +A+G GTGIV+DP G VLTN HV+ GA +N +G++Y ++ Sbjct 45 VEPAVARIDTEIDYQSAIGTGTGIVLDPGGQVLTNFHVVQGADRVNVTV--AGRSYPAEL 102 Query 119 VGYDRTQDVAVLQLRGAGGLPSAAIG--GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVAL 176 VGYDR +D+AV+QL GAGGLP A IG +A GEPVVA+GN+ G G V A Sbjct 103 VGYDRGRDIAVIQLLGAGGLPVAPIGDSAALAAGEPVVALGNAQGSAAPLTREVGSVTAF 162 Query 177 GQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGG 236 G+TVQA DSLTG+ + L GLI+F A ++ GDSGGPVVN GQVVG+ TAAS N+++ GG Sbjct 163 GRTVQAEDSLTGSSDELTGLIEFAAPVRAGDSGGPVVNSAGQVVGITTAASVNYRMGPGG 222 Query 237 QGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGV--VDNNGNGARVQRVVGSAPAA 294 +GFAIPI +A+ +A QIRS S TVHIGP A LG+GV ++ G +Q V+ PA Sbjct 223 KGFAIPINEAVGVANQIRSRIPSDTVHIGPPALLGVGVRTAPSDVPGVLIQEVLRGGPAE 282 Query 295 SLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 + G+ DV+ A++G + SAT + L+ +PGDV+ VTW G RT TLA GP Sbjct 283 AAGLMDRDVLIAINGNRLTSATQLTYTLDRFYPGDVVDVTWIDGFGQERTAKATLAPGP 341 >gi|315446395|ref|YP_004079274.1| trypsin-like serine protease with C-terminal PDZ domain [Mycobacterium sp. Spyr1] gi|315264698|gb|ADU01440.1| trypsin-like serine protease with C-terminal PDZ domain [Mycobacterium sp. Spyr1] Length=339 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 147/296 (50%), Positives = 192/296 (65%), Gaps = 6/296 (2%) Query 58 QVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVD 117 QV P VV I+T + Y +G GTG+VIDP G+VLTN HV+ GA I A +VG G+ Y Sbjct 42 QVEPAVVRIDTAVDYQGVIGLGTGMVIDPGGLVLTNFHVVQGADRITA-TVG-GRPYPAQ 99 Query 118 VVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGTPRAVPGRVVA 175 +VGYDR +DVAV+QL GA GLP+A IG +A GEPVVA+GN+ G G + A Sbjct 100 LVGYDRGRDVAVIQLLGAAGLPAAPIGDANILAPGEPVVALGNAMGSDAPLTREVGTLTA 159 Query 176 LGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQG 235 G+TV+A D+LTG+ + L GL +F A ++ GDSGGPVV+ GQVVG+ TAAS NF++ G Sbjct 160 FGRTVEAEDTLTGSTDELTGLFEFAAPVRAGDSGGPVVSSTGQVVGVTTAASVNFRMGPG 219 Query 236 GQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGV--VDNNGNGARVQRVVGSAPA 293 G+GFAIPI AM + GQIR+G S TVHIGP LG+GV + G +Q V+ PA Sbjct 220 GKGFAIPINDAMGVVGQIRAGVPSDTVHIGPPTLLGVGVRAAPRDAPGVLIQEVMVGGPA 279 Query 294 ASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTL 349 G+ GD+I +DG P++S + L+ H+PGDV+ +TW G TRTG L Sbjct 280 DRAGLLAGDIIVMLDGTPLDSTNTLTSVLDRHYPGDVLDLTWIDTLGQTRTGKAVL 335 >gi|339293189|gb|AEJ45300.1| serine protease pepA [Mycobacterium tuberculosis CCDC5079] Length=137 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 131/132 (99%), Positives = 132/132 (100%), Gaps = 0/132 (0%) Query 14 LLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN 73 +LSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN Sbjct 1 MLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN 60 Query 74 NAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLR 133 NAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLR Sbjct 61 NAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLR 120 Query 134 GAGGLPSAAIGG 145 GAGGLPSAAIGG Sbjct 121 GAGGLPSAAIGG 132 >gi|120406480|ref|YP_956309.1| PDZ/DHR/GLGF domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959298|gb|ABM16303.1| PDZ/DHR/GLGF domain protein [Mycobacterium vanbaalenii PYR-1] Length=335 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 148/307 (49%), Positives = 191/307 (63%), Gaps = 6/307 (1%) Query 47 ALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAF 106 A P DP A QV P VV I+T++ Y VG GTGIV+DP G VLTN HV+ GA I Sbjct 27 AAPGDPVAASVQVEPAVVRIDTEVDYQGVVGLGTGIVLDPAGQVLTNFHVVQGADRITGT 86 Query 107 SVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAV--GEPVVAMGNSGGQGG 164 +G+ Y +VGYDR +DVAVLQL GA GL +A IG A+ G+PVVA+GN+ G Sbjct 87 V--AGRAYPAQLVGYDRKRDVAVLQLIGANGLAAAPIGDAYALVPGQPVVALGNAMGTEA 144 Query 165 TPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNT 224 G + G+TVQA D+LTG + L GL +F A ++ GDSGGPVVN LGQVVG+ T Sbjct 145 PLTREVGTLTGFGRTVQAEDTLTGTSDELTGLFEFAAPVRAGDSGGPVVNDLGQVVGITT 204 Query 225 AASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGV--VDNNGNGA 282 AAS NF++ GG+GFAIPI AM +AGQIR G S +VHIGP LG+GV + G Sbjct 205 AASVNFRMGPGGKGFAIPINDAMGVAGQIRGGIRSDSVHIGPPTLLGVGVRTAPRDEPGV 264 Query 283 RVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGT 342 +Q V+ PA G+ GD++ +DG P++S + L+ H+ GDV+ +TW +G T Sbjct 265 LIQEVMVGGPADLAGLRAGDILIELDGTPLDSTNTLTSVLDRHYTGDVLDLTWVDSTGVT 324 Query 343 RTGNVTL 349 R G L Sbjct 325 RDGKAVL 331 >gi|145221870|ref|YP_001132548.1| PDZ/DHR/GLGF domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214356|gb|ABP43760.1| PDZ/DHR/GLGF domain protein [Mycobacterium gilvum PYR-GCK] Length=297 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 145/293 (50%), Positives = 190/293 (65%), Gaps = 6/293 (2%) Query 61 PQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVG 120 P VV I+T + Y +G GTG+VIDP G+VLTN HV+ GA I A +VG G+ Y +VG Sbjct 3 PAVVRIDTAVDYQGVIGLGTGMVIDPGGLVLTNFHVVQGADRITA-TVG-GRPYPAQLVG 60 Query 121 YDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQ 178 YDR +DVAV+QL GA GLP+A IG +A GEPVVA+GN+ G G + A G+ Sbjct 61 YDRGRDVAVIQLLGAAGLPAAPIGDANILAPGEPVVALGNAMGSDAPLTREVGTLTAFGR 120 Query 179 TVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQG 238 TV+A D+LTG+ + L GL +F A ++ GDSGGPVV+ GQVVG+ TAAS NF++ GG+G Sbjct 121 TVEAEDTLTGSTDELTGLFEFAAPVRAGDSGGPVVSSTGQVVGVTTAASVNFRMGPGGKG 180 Query 239 FAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGV--VDNNGNGARVQRVVGSAPAASL 296 FAIPI AM + GQIR+G S TVHIGP LG+GV + G +Q V+ PA Sbjct 181 FAIPINDAMGVVGQIRAGVPSDTVHIGPPTLLGVGVRAAPRDAPGVLIQEVMVGGPADRA 240 Query 297 GISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTL 349 G+ GD+I +DG P++S + L+ H+PGDV+ +TW G TRTG L Sbjct 241 GLLAGDIIVMLDGTPLDSTNTLTSVLDRHYPGDVLDLTWIDTLGQTRTGKAVL 293 >gi|111021065|ref|YP_704037.1| serine protease [Rhodococcus jostii RHA1] gi|110820595|gb|ABG95879.1| probable serine protease [Rhodococcus jostii RHA1] Length=358 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 138/304 (46%), Positives = 191/304 (63%), Gaps = 10/304 (3%) Query 57 AQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGV 116 A+V P +V + G AGTGIV+ P+GVVLTN+HVI GA DI+A S+G+G Y Sbjct 58 ARVIPAIVTLVADSGLVET--AGTGIVLTPDGVVLTNHHVIDGALDISAVSLGNGTAYVA 115 Query 117 DVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGTPRAVPGRVV 174 DV+GYD ++DVAVL+LRGAG LP A + + +G+PV A+GN+ G GG P A G V Sbjct 116 DVLGYDSSRDVAVLRLRGAGDLPVATLSKDTTIGIGDPVTAVGNAEG-GGVPVAARGFVT 174 Query 175 ALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQ 234 + QT+ A S G+ LNGLIQ DAA++PGDSGGP+V+ V+G+NTA + + ++ Sbjct 175 DVEQTITARSSTDGSRNRLNGLIQIDAAVRPGDSGGPLVDATAAVIGVNTAGNADSDPTK 234 Query 235 GG----QGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGS 290 + +A+PI AM I Q+R+G S TVHIG T LG+ V D++ GA V V Sbjct 235 PAPAQPRSYAVPIDTAMTIVDQVRAGTTSATVHIGDTPLLGISVTDDD-RGAEVLWVSIG 293 Query 291 APAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLA 350 PA GI GDVIT DG P+ S+ +++ + G HPGD ++V W ++G R+ + L Sbjct 294 TPADEAGIEIGDVITDFDGTPVRSSDDLSERMIGRHPGDEVAVRWFDETGQQRSTTIVLE 353 Query 351 EGPP 354 +GPP Sbjct 354 KGPP 357 >gi|226363367|ref|YP_002781149.1| S1C family peptidase [Rhodococcus opacus B4] gi|226241856|dbj|BAH52204.1| putative S1C family peptidase [Rhodococcus opacus B4] Length=358 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 138/304 (46%), Positives = 189/304 (63%), Gaps = 10/304 (3%) Query 57 AQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGV 116 A+V P +V + G AGTGIV+ P+GVVLTN+HVI GA DI+A S+G+G Y Sbjct 58 ARVIPAIVTLVADSGLVET--AGTGIVLTPDGVVLTNHHVIDGAIDISAVSLGNGAEYVA 115 Query 117 DVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGTPRAVPGRVV 174 DV+GYD ++D+AVL+L+GAG LP+A + VAVG+PV A+GN+ G GG P A G V Sbjct 116 DVLGYDSSRDIAVLRLQGAGDLPAATLAKDTTVAVGDPVTAVGNAEG-GGVPVAARGFVT 174 Query 175 ALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQ 234 LGQ + A S G+ LNGLIQ DAA++PGDSGGP+V+ V+G+NTA + + ++ Sbjct 175 DLGQAITARSSTDGSRNRLNGLIQIDAAVRPGDSGGPLVDATAAVIGVNTAGNADSDPTK 234 Query 235 GG----QGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGS 290 + +A+PI AM I Q+R+G S TVHIG T LG+ V D + GA V V Sbjct 235 PAPAQPRSYAVPIDTAMTIVDQVRAGAASATVHIGDTPLLGISVTD-DARGAEVLWVSIG 293 Query 291 APAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLA 350 PA GI GDV+T DG PI S+ ++ + HPGD + + W ++G R+ + L Sbjct 294 TPADDAGIEIGDVVTEFDGIPIRSSDDLSGLMISRHPGDAVDMRWLDETGRQRSTTIVLE 353 Query 351 EGPP 354 +GPP Sbjct 354 KGPP 357 >gi|148273618|ref|YP_001223179.1| secreted serine protease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831548|emb|CAN02515.1| putative secreted serine protease, family S1C [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length=394 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 150/306 (50%), Positives = 195/306 (64%), Gaps = 10/306 (3%) Query 52 PSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSG 111 P A AQ VV I++ L Y NA GAGTGI++ +G +LTNNHV++GAT I +G Sbjct 93 PEATTAQK-AGVVTIDSALTYENAAGAGTGIILSSDGTILTNNHVVSGATSIRVTVESTG 151 Query 112 QTYGVDVVGYDRTQDVAVLQLRGAGGL-PSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVP 170 + Y VVG D T DVAVL+L A GL P+ GV VGE V +GN+GG GT A Sbjct 152 KAYVGKVVGTDATNDVAVLKLEDASGLTPAKLDTDGVQVGEAVTGVGNAGGT-GTLTAAT 210 Query 171 GRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASD-N 229 G+V ALGQT+ T A ETL LIQ DAAI GDSGGP+V+ G+VVG++TAAS + Sbjct 211 GQVTALGQTITTQSEGTAAGETLTDLIQTDAAIVSGDSGGPLVDAEGEVVGIDTAASSGS 270 Query 230 FQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGN--GARVQRV 287 Q++ GFAIPI +A++IA QI SG S TV IG AFLG+ + D G GA VQ V Sbjct 271 AQIA----GFAIPIDKAVSIATQIESGVESGTVKIGYPAFLGVLLADGAGTVAGAPVQGV 326 Query 288 VGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNV 347 V + AA G++ GDV+T+VDG + SA+ ++ A++ H PG+ + + W T +G +TG V Sbjct 327 VDGSGAAKAGLAQGDVVTSVDGKAVASASELSAAISAHKPGESVELGWTTAAGAEKTGTV 386 Query 348 TLAEGP 353 TL EGP Sbjct 387 TLTEGP 392 >gi|302527941|ref|ZP_07280283.1| predicted protein [Streptomyces sp. AA4] gi|302436836|gb|EFL08652.1| predicted protein [Streptomyces sp. AA4] Length=474 Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 160/353 (46%), Positives = 209/353 (60%), Gaps = 49/353 (13%) Query 50 LDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVG 109 LDP A+ +V +VNINT+LGY A AGTGIV+ P+G VLTNNHV+ GAT I +G Sbjct 120 LDPQAIAKKVSAGIVNINTELGYQGAAAAGTGIVLTPDGEVLTNNHVVEGATSIKVTDIG 179 Query 110 SGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIG--GGVAVGEPVVAMGNSGGQGGTPR 167 +GQTY V+GYDR+ DVAVL+L A GL + +G V VG+ VV +GN+GG GG P Sbjct 180 NGQTYPASVLGYDRSHDVAVLKLAAASGLATETLGDSSSVKVGDAVVGLGNAGGAGGAPI 239 Query 168 AVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAAS 227 GRV AL Q++ ASD + E L LIQ DA IQ GDSGGP+VN GQVVG++TAAS Sbjct 240 PAGGRVTALNQSITASDESNSSSEQLKDLIQVDANIQSGDSGGPLVNAQGQVVGVDTAAS 299 Query 228 DNFQLSQGG-----------------------------------------QGFAIPIGQA 246 +Q + GG +G+AIPI QA Sbjct 300 AGYQFNGGGRRGHSGLGNGFPGDNSQGGSQGDGSQGNGSQGNGSQGSGGHEGYAIPINQA 359 Query 247 MAIAGQIRSGGGSPTVHIGPTAFLGLGVVD------NNGNGARVQRVVGSAPAASLGIST 300 +++A QI G GS TVHIG +AFLG+ V D G+GA +Q+VV AA G++ Sbjct 360 ISLAHQIVGGTGSDTVHIGKSAFLGVTVSDAGQQQGGTGSGAAIQQVVPDGAAAQAGLAA 419 Query 301 GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 GDVITAVDG ++S TA+ ++ HHPGD ++VT+ ++G + V A+GP Sbjct 420 GDVITAVDGKAVDSPTALTALMDQHHPGDKLTVTFLDQTGQQQNATVVPADGP 472 >gi|229492648|ref|ZP_04386451.1| trypsin [Rhodococcus erythropolis SK121] gi|229320634|gb|EEN86452.1| trypsin [Rhodococcus erythropolis SK121] Length=363 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 133/316 (43%), Positives = 190/316 (61%), Gaps = 10/316 (3%) Query 46 PALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINA 105 P +PL P + A+V P +V I G+ AGTGIV+ P+GVVLTN+HVI+GA+D+ A Sbjct 50 PVVPLTPEELSARVVPTIVTITAPAGFTTT--AGTGIVLSPDGVVLTNHHVISGASDVTA 107 Query 106 FSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQG 163 S+ +G Y +++GYD D+AVL+L GA LP A +G A G+ V A+GN+ G G Sbjct 108 VSMSNGLIYDAEILGYDSVSDLAVLRLAGADDLPVAVVGKSAEAARGDSVTAIGNAEG-G 166 Query 164 GTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMN 223 G P PG + LG TV + G+ L GLI+ DA I+PGDSGGP+VN +G+++G++ Sbjct 167 GVPVPAPGVITNLGVTVNTRNVSDGSRNQLKGLIEVDADIRPGDSGGPLVNAVGELIGVS 226 Query 224 T---AASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGN 280 + A +D + S Q +AIPI A+ I Q+ G S TV +GPT LG+ V D+ Sbjct 227 SAGNAVTDRTETSPAPQSYAIPIDTALPIVEQVLGGRSSETVRVGPTPVLGVAVKDHADM 286 Query 281 --GARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTK 338 GA V V +PA +G++ G VIT G+ I S+ + A++ PGD ++VTW Sbjct 287 PAGAEVVAVSFDSPAERVGLTKGAVITEFGGSRIASSADLNAAMSSRRPGDTVAVTWVDA 346 Query 339 SGGTRTGNVTLAEGPP 354 +G TG++ L EGPP Sbjct 347 TGQPGTGSLVLDEGPP 362 >gi|226303734|ref|YP_002763692.1| S1 family peptidase [Rhodococcus erythropolis PR4] gi|226182849|dbj|BAH30953.1| putative S1 family peptidase [Rhodococcus erythropolis PR4] Length=364 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 131/312 (42%), Positives = 186/312 (60%), Gaps = 10/312 (3%) Query 50 LDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVG 109 L P + AQV P +V I G+ AGTGIV+ P+GVVLTN+HVI+GA+D+ A S+ Sbjct 55 LTPEELSAQVVPTIVTITAPAGFTTT--AGTGIVLSPDGVVLTNHHVISGASDVTAVSMS 112 Query 110 SGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAV--GEPVVAMGNSGGQGGTPR 167 +G Y +++GYD D+AVL+L GA LP A +G G+ V A+GN+ G GG P Sbjct 113 NGLIYDAEILGYDSVSDLAVLRLAGATDLPVAVVGKSAEATRGDAVTAIGNAEG-GGVPV 171 Query 168 AVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNT--- 224 PG + LG TV + G+ L GLI+ DA I+PGDSGGP+VN +G+++G+++ Sbjct 172 PAPGVITNLGVTVNTRNVSDGSRNQLKGLIEVDADIRPGDSGGPLVNAVGELIGVSSAGN 231 Query 225 AASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGN--GA 282 A +D + S Q +AIPI A+ I Q+ G S TV +GPT LG+ V D+ GA Sbjct 232 AVTDRTETSPAPQSYAIPIDTALPIVEQVLGGRSSETVRVGPTPVLGVAVKDHAEMPAGA 291 Query 283 RVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGT 342 V V +PA +G++ G VIT G+ I S+ + A++ PGD ++VTW +G Sbjct 292 EVVAVSFDSPAERVGLTKGAVITEFGGSRIASSADLNAAMSSRRPGDTVAVTWVDATGQP 351 Query 343 RTGNVTLAEGPP 354 TG++ L EGPP Sbjct 352 GTGSLVLDEGPP 363 >gi|170782706|ref|YP_001711040.1| putative protease [Clavibacter michiganensis subsp. sepedonicus] gi|169157276|emb|CAQ02461.1| putative protease [Clavibacter michiganensis subsp. sepedonicus] Length=392 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 143/295 (49%), Positives = 189/295 (65%), Gaps = 9/295 (3%) Query 63 VVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYD 122 VV I++ L Y NA GAGTGI++ +G +LTNNHV++GAT I +G+ Y VVG D Sbjct 101 VVTIDSALTYENAAGAGTGIILSSDGTILTNNHVVSGATSIRVTVESTGKAYVGKVVGTD 160 Query 123 RTQDVAVLQLRGAGGL-PSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQ 181 T DVAVL+L GA GL P+ GV VGE V +GN+GG GT A G+V A GQ++ Sbjct 161 ATNDVAVLKLEGASGLTPAKLDSDGVQVGEAVTGVGNAGGT-GTLTAATGQVTATGQSIT 219 Query 182 ASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASD-NFQLSQGGQGFA 240 T A ETL LIQ DA I GDSGGP+V+ +VVG++TAAS + Q++ GFA Sbjct 220 TQSEGTAAGETLTDLIQTDAPIVSGDSGGPLVDTENEVVGIDTAASSGSAQIA----GFA 275 Query 241 IPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGN--GARVQRVVGSAPAASLGI 298 IPI +AM IA QI SG S TV IG AFLG+ + + G GA VQ VV + AA G+ Sbjct 276 IPIEKAMGIAKQIESGVESGTVKIGYPAFLGVLLANGQGTVAGAPVQGVVDGSGAAKAGL 335 Query 299 STGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 + GDV+T+VDG + SA+ ++ A++ H PG+ +++ W T +G +TG VTL EGP Sbjct 336 AQGDVVTSVDGKAVASASELSAAISAHKPGESVTLGWTTAAGAAKTGAVTLTEGP 390 >gi|325675110|ref|ZP_08154796.1| serine protease [Rhodococcus equi ATCC 33707] gi|325554071|gb|EGD23747.1| serine protease [Rhodococcus equi ATCC 33707] Length=372 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 117/280 (42%), Positives = 172/280 (62%), Gaps = 12/280 (4%) Query 86 PNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGG 145 P +VLTN+HVI G TDI A S+ G Y V+V+GYD ++D+AVL+L G LP AA+G Sbjct 93 PAAIVLTNHHVIDGGTDITAESMRDGTPYPVEVLGYDSSRDLAVLRLPGGAALPPAALGS 152 Query 146 G--VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAI 203 VG+PV A+GN+ G GG P++ PG V LG TV +S+ G+ L GLI+ +A + Sbjct 153 SRNAGVGDPVTAIGNAEG-GGVPQSAPGAVTRLGVTVLTRNSVDGSRNELAGLIEVNADV 211 Query 204 QPGDSGGPVVNGLGQVVGMNT---AASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSP 260 +PGDSGGP+V+ G+V+G+++ A + + + +AIPI A+ + QI +G S Sbjct 212 RPGDSGGPLVDAFGEVIGVSSAGNAVQRDEPSAPAPKSYAIPIDSALEVVDQILAGRPSD 271 Query 261 TVHIGPTAFLGLGVVDN------NGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINS 314 +VHIGPT LG+ V D+ GA++ +V +PA LG++ GDVI G PI + Sbjct 272 SVHIGPTPQLGVSVRDHVEPQAGTPAGAQIVQVSYRSPADGLGLARGDVIVQFGGVPIRT 331 Query 315 ATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPP 354 A+ + + HPGDV+ + W +G R+G++ L EGPP Sbjct 332 ASDLTVRMIALHPGDVVDLAWIDATGAQRSGSMVLTEGPP 371 >gi|312137738|ref|YP_004005074.1| serine peptidase [Rhodococcus equi 103S] gi|311887077|emb|CBH46386.1| putative secreted serine peptidase [Rhodococcus equi 103S] Length=372 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/280 (43%), Positives = 172/280 (62%), Gaps = 12/280 (4%) Query 86 PNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGG 145 P +VLTN+HVI G TDI A S+ G Y V+V+GYD ++D+AVL+L G LP AA+G Sbjct 93 PAAIVLTNHHVIDGGTDITAESMRDGTPYPVEVLGYDSSRDLAVLRLPGGAALPPAALGS 152 Query 146 G--VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAI 203 VG+PV A+GN+ G GG P++ PG V LG TV +S+ G+ L GLI+ +A + Sbjct 153 SRNAGVGDPVTAIGNAEG-GGVPQSAPGAVTRLGVTVLTRNSVDGSRNELAGLIEVNADV 211 Query 204 QPGDSGGPVVNGLGQVVGMNT---AASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSP 260 +PGDSGGP+V+ G+V+G+++ A + + + +AIPI A+ + QI +G S Sbjct 212 RPGDSGGPLVDAFGEVIGVSSAGNAVQRDEPSAPAPKSYAIPIDSALEVVDQILAGRPSD 271 Query 261 TVHIGPTAFLGLGVVDN------NGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINS 314 +VHIGPT LG+ V D+ GA++ +V +PA LG++ GDVI G PI + Sbjct 272 SVHIGPTPQLGVSVRDHVEPQAGTPAGAQIVQVSYRSPADGLGLARGDVIVQFGGVPIRT 331 Query 315 ATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPP 354 A+ + + HPGDV+ V W +G R+G++ L EGPP Sbjct 332 ASDLTVRMIALHPGDVVDVGWIDATGAQRSGSMVLTEGPP 371 >gi|54027199|ref|YP_121441.1| putative protease [Nocardia farcinica IFM 10152] gi|54018707|dbj|BAD60077.1| putative protease [Nocardia farcinica IFM 10152] Length=364 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 125/312 (41%), Positives = 184/312 (59%), Gaps = 3/312 (0%) Query 46 PALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINA 105 P PLD +A+ A+V P +VNI+T+ AGTGIV+ +G VLT++HV+ GA + Sbjct 52 PNPPLDQAAVAAEVTPALVNISTRTRPLGQGAAGTGIVLTADGQVLTSHHVVKGAEQVVV 111 Query 106 FSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQG 163 + +G Y V+GYD T D+A+L L GA GLP+A +G V V + V+A+GN+GG G Sbjct 112 TTQATGAEYRATVLGYDSTADIALLSLPGANGLPTARLGSSSSVRVRDEVLALGNAGGTG 171 Query 164 GTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMN 223 G P A PG V AL T+ A ++ + + L G+++ A + G SGG +V+ G VVG+ Sbjct 172 GPPTATPGLVTALNSTIVALNAADLSRKALRGMVEVAAPVSSGQSGGALVDWQGAVVGVV 231 Query 224 TAASDNFQLS-QGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGA 282 TA+S + G+A+PI AM + QIRSG + TVHIGPTA LG+ + D + +GA Sbjct 232 TASSGEAAAELERPNGYAVPIDTAMRVVRQIRSGIPTDTVHIGPTATLGVLISDASPSGA 291 Query 283 RVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGT 342 R+ + PA + G++ G+VI ++DG PI SA + A++ PG+ + + G Sbjct 292 RIDVALYGLPAYAAGLADGEVIVSIDGRPIGSARVLRTAIDRRRPGETVRLGVLGVDGVE 351 Query 343 RTGNVTLAEGPP 354 RT V L G P Sbjct 352 RTVTVELGLGTP 363 >gi|332671091|ref|YP_004454099.1| PDZ/DHR/GLGF domain-containing protein [Cellulomonas fimi ATCC 484] gi|332340129|gb|AEE46712.1| PDZ/DHR/GLGF domain protein [Cellulomonas fimi ATCC 484] Length=544 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 134/299 (45%), Positives = 184/299 (62%), Gaps = 15/299 (5%) Query 63 VVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYD 122 VV I + LGY AGTG+V+ G+VLTN+HV+ GAT I+ +G+T+ VVGYD Sbjct 251 VVTITSTLGYQGGSSAGTGMVLTTGGLVLTNHHVVEGATAISVTVESTGETFEATVVGYD 310 Query 123 RTQDVAVLQLRGAGGLPSAAI--GGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTV 180 + DVA+LQL GA GL + + GGVA G+ V A+GN+ G G A G V +T+ Sbjct 311 ASADVALLQLTGASGLATVTLDDDGGVAPGDTVTAVGNADGTGEL-VAATGEVTGTDETM 369 Query 181 QASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ--- 237 A S G ETL+GL++F AA+ GDSGGPV++ G+VVG+ TAA S GG Sbjct 370 TARTSTAGEAETLSGLLEFSAAVVGGDSGGPVLDEEGEVVGITTAA------SVGGTSTV 423 Query 238 GFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNG--NGARVQRVVGSAPAAS 295 +AI + A+A+ QI SG + TV IG AFLG+G+ G GARV V+ PAA Sbjct 424 AYAIDVVDAVAVLQQISSGEETATVRIGYPAFLGIGLDAGAGTVTGARVAGVLDGTPAAG 483 Query 296 LGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGG-TRTGNVTLAEGP 353 G++ GDV+TAVDG ++SATA+ + L+G+ PGD +++TW + G + VTL +GP Sbjct 484 AGLAAGDVVTAVDGTAVSSATALQELLDGYAPGDAVTLTWTDAATGVSEQAAVTLTQGP 542 >gi|258654784|ref|YP_003203940.1| peptidase S1 and S6 chymotrypsin/Hap [Nakamurella multipartita DSM 44233] gi|258558009|gb|ACV80951.1| peptidase S1 and S6 chymotrypsin/Hap [Nakamurella multipartita DSM 44233] Length=423 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 142/317 (45%), Positives = 181/317 (58%), Gaps = 23/317 (7%) Query 58 QVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVD 117 QVG +V I+T LGY +A AGTG+V+ NG +LTNNHVI G+T I V +GQTY Sbjct 111 QVG--LVYIDTVLGYQDAAAAGTGLVLTSNGQILTNNHVIEGSTSITVTIVTTGQTYQAS 168 Query 118 VVGYDRTQDVAVLQLRGAGGLPSAAIG--GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVA 175 VVG D D+AVLQL A GL +A G + VGE VV +GN+GG GGTP A G V A Sbjct 169 VVGTDVQDDIAVLQLGDASGLTTANFGTSADLQVGESVVGVGNAGGDGGTPSAAAGVVSA 228 Query 176 LGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQG 235 L QT+ + A ETL GLI+ A IQ GDSGGP+ + +VVG++TAA Q Sbjct 229 LNQTITTQAEGSAAGETLTGLIETTADIQSGDSGGPLFDANDEVVGIDTAA--EVVAGQS 286 Query 236 GQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGV-----------------VDNN 278 G+AIPI A+ IA QI +G S V IG AFLG+ V Sbjct 287 ENGYAIPIDTALGIAKQIITGDESDGVRIGYPAFLGVQVQSAATAGTGTGRSRSGSSSTG 346 Query 279 GNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTK 338 GA + VV +PA G++ GD +T +D ++SA ++ AL H+PGD +SVTW Sbjct 347 TAGALIGGVVSGSPAEQAGLTAGDTVTGIDDRAVSSADGLSTALAAHNPGDRVSVTWVDS 406 Query 339 SGGTRTGNVTLAEGPPA 355 SG + VTLA+GP A Sbjct 407 SGAKHSATVTLAQGPAA 423 >gi|331696262|ref|YP_004332501.1| PDZ/DHR/GLGF domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326950951|gb|AEA24648.1| PDZ/DHR/GLGF domain protein [Pseudonocardia dioxanivorans CB1190] Length=433 Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 149/325 (46%), Positives = 185/325 (57%), Gaps = 24/325 (7%) Query 54 AMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQT 113 A AQ VV+I+T L Y AGTG+V+ +G VLTNNHV+A AT I VG+G + Sbjct 110 AATAQEEVGVVDIDTVLDYGTGRAAGTGLVLTADGEVLTNNHVVADATSITVTVVGTGAS 169 Query 114 YGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAV-----GEPVVAMGNSGGQGGTPRA 168 Y VVG D T DVAVL+L A GL A + G V A+GN+GG GGTP A Sbjct 170 YRASVVGTDATDDVAVLRLADASGLTPAVLASSAQQAAVAPGTAVTAVGNAGGVGGTPSA 229 Query 169 VPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASD 228 PG V+AL Q + A D G E L G+I+ DAAI+ GDSGGP+ G G VVG++TAAS Sbjct 230 APGTVLALDQAITAGDESGGDSEQLTGMIEVDAAIEAGDSGGPLYAG-GAVVGIDTAASS 288 Query 229 -----NFQL------SQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGL----- 272 +F+ S G GFAIPIG A+ IA QI SG S + G AFLG+ Sbjct 289 ASSGPSFRTAALPGSSSGTVGFAIPIGTALDIAQQITSGEQSDAITQGTPAFLGVELAQG 348 Query 273 --GVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDV 330 GV D GA V VV PAA+ G++ GDV+T+V P++ A++ AL H PGD Sbjct 349 AGGVADPAAEGAVVSGVVPGGPAAAAGLAAGDVVTSVGATPVDGPDALSAALAAHRPGDH 408 Query 331 ISVTWQTKSGGTRTGNVTLAEGPPA 355 + + W SG RT VTLA GP A Sbjct 409 VEIGWSDASGSARTATVTLAAGPAA 433 >gi|339293190|gb|AEJ45301.1| serine protease pepA [Mycobacterium tuberculosis CCDC5079] Length=159 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%) Query 145 GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQ 204 GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQ Sbjct 2 GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQ 61 Query 205 PGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ 237 PGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ Sbjct 62 PGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ 94 >gi|336321368|ref|YP_004601336.1| PDZ/DHR/GLGF domain-containing protein [Cellvibrio gilvus ATCC 13127] gi|336104949|gb|AEI12768.1| PDZ/DHR/GLGF domain protein [Cellvibrio gilvus ATCC 13127] Length=463 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 136/304 (45%), Positives = 177/304 (59%), Gaps = 15/304 (4%) Query 58 QVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVD 117 QVG VV I + LGY A AGTG+V+ +G+VLTNNHVI GAT+I +G TY Sbjct 165 QVG--VVTITSTLGYAQAESAGTGMVLTADGLVLTNNHVIDGATEIEVTVESTGTTYAAT 222 Query 118 VVGYDRTQDVAVLQLRGAGGLPSAAI--GGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVA 175 VVG DVA+LQL A GL I GGV VG+ V A+GN+ G G A G V A Sbjct 223 VVGTAPDSDVALLQLEDASGLTPVTIDDDGGVDVGDQVTAVGNAEGTGDL-VAAAGTVTA 281 Query 176 LGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQG 235 QT+ AS T + ETL+GL+Q A + GDSGGPV++ G+VVGM TAAS + Sbjct 282 TEQTMTASTDGTDS-ETLSGLVQLQADVVSGDSGGPVLDDEGEVVGMTTAASSGGVTT-- 338 Query 236 GQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVD-----NNGNGARVQRVVGS 290 +AI + A+ + QIRSG S V IG AFLG+ + + GA + VV Sbjct 339 -VAYAIDVQDALVLVRQIRSGDDSGGVTIGYPAFLGVSLATGPSGAGSAAGATIAGVVAD 397 Query 291 APAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKS-GGTRTGNVTL 349 PAA G+ GD +TAVDG ++S ++ L G+ PGD +++TW + S GGT+T VTL Sbjct 398 TPAAEAGLEAGDTVTAVDGTAVSSGDELSSVLAGYAPGDEVTLTWTSGSTGGTQTATVTL 457 Query 350 AEGP 353 +GP Sbjct 458 VQGP 461 >gi|297625432|ref|YP_003687195.1| secreted serine protease, trypsin-like serine proteases [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921197|emb|CBL55746.1| secreted serine protease, trypsin-like serine proteases [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=480 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 130/336 (39%), Positives = 182/336 (55%), Gaps = 18/336 (5%) Query 26 ATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVID 85 AT PAQA+P SQ A +A AQ VV I T+ + AG+G+V+ Sbjct 153 ATQPAQASPSTSSQRAVAQS-----QTTASEAQ-SKGVVLITTQT--TSGAAAGSGMVLS 204 Query 86 PNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGG 145 +G VLTN HV+ +T I A + + Y VVG D T DVA+L+L GA GL + I Sbjct 205 SDGYVLTNYHVVETSTQITATVASTNKQYNATVVGRDATNDVALLKLDGASGLDTVTIDS 264 Query 146 G-VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAE-ETLNGLIQFDAAI 203 V G+ V A+GNS GQG A G+VV+ ++ + + ++ ETL + + Sbjct 265 DTVNTGDQVTAVGNSSGQGYL-SAATGQVVSTSSSITVQNETSASQTETLTNVYETSTQA 323 Query 204 QPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQG-----FAIPIGQAMAIAGQIRSGGG 258 PGDSGGP+ + +V+G+ TA S+ GQ +AIPI +AM+I QI SG Sbjct 324 VPGDSGGPMFDAENEVMGITTAGETQTN-SRTGQSSTVSSYAIPIARAMSIVKQIESGQS 382 Query 259 SPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAM 318 S TV +GP A+LG+ V + + +VV PAA+ G+S G VITAVDG I+S + Sbjct 383 SGTVQVGPKAYLGVTVQSSQSGSVTISQVVSDGPAAAAGLSVGQVITAVDGTRIDSQATL 442 Query 319 ADALNGHHPGDVISVTWQT-KSGGTRTGNVTLAEGP 353 + L H PGD +SVT + GGT+T ++TL P Sbjct 443 SSVLAQHKPGDKVSVTVSSGYGGGTQTASLTLGTSP 478 >gi|256371362|ref|YP_003109186.1| PDZ/DHR/GLGF domain-containing protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007946|gb|ACU53513.1| PDZ/DHR/GLGF domain protein [Acidimicrobium ferrooxidans DSM 10331] Length=487 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 131/338 (39%), Positives = 185/338 (55%), Gaps = 36/338 (10%) Query 50 LDPSAMVAQVGPQVVNINTKLGYNNAVG------AGTGIVIDPNGVVLTNNHVIAGATDI 103 L+ A++A+V P VV+I +N G AGTG++I NG+VLTNNHV+AGA+++ Sbjct 154 LNIPAILAKVEPAVVDITATGTTSNGFGVSQFEDAGTGMIISSNGLVLTNNHVVAGASNV 213 Query 104 NAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVA--VGEPVVAMGNSGG 161 G + ++G D DVA+LQ+ GA LP+ G A VG+PVVA+GN+ Sbjct 214 RVTLYGQSSSRPAKIIGTDPAHDVALLQIEGASNLPTVTFGDSSALVVGDPVVAIGNALA 273 Query 162 QGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVG 221 GTP G V AL +T+ A+DSL G ET++G+IQ DA I G+SGGP+V+ G VVG Sbjct 274 LQGTPTVTQGIVSALNRTITATDSL-GTTETISGMIQTDAPISSGNSGGPLVDAQGDVVG 332 Query 222 MNTAA-SDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPT-----------AF 269 MNTA + + Q S GFA I + I I +PT + G + AF Sbjct 333 MNTAVIASSGQTSAQNLGFAESINSVLPIVKTIEQ---NPTAYTGSSTSPSTTTAGSGAF 389 Query 270 LGLGV------------VDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATA 317 LG+G+ + + G V+ V + AA+ GI GDVITAVDG + SA A Sbjct 390 LGVGIQTLTPTLDSQLGLPTSQTGVLVEYVYPGSGAANAGIQPGDVITAVDGQAVTSANA 449 Query 318 MADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 +A A++ PG I+++ T+SG ++ TL P A Sbjct 450 LATAIHAKSPGQQITLSIVTQSGAQQSLTATLGTSPAA 487 >gi|309811136|ref|ZP_07704933.1| trypsin [Dermacoccus sp. Ellin185] gi|308434924|gb|EFP58759.1| trypsin [Dermacoccus sp. Ellin185] Length=410 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 116/287 (41%), Positives = 169/287 (59%), Gaps = 16/287 (5%) Query 78 AGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGG 137 AG+G+V+ +G VLTN HV++G+T I +V +G +Y VVG+D + DVAVL+L GA Sbjct 123 AGSGMVLTADGTVLTNYHVVSGSTQIR-VTVPNGGSYTASVVGHDESHDVAVLKLSGAKN 181 Query 138 LPSAAIG-GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASD--SLTGAEETLN 194 L + + GV E V+A+G GG+G A G V A G+++ AS+ SL+ E L Sbjct 182 LDTVTLDTDGVRTAEEVLAVGQGGGEG-VLYAASGIVTATGRSITASEQGSLSSGEN-LT 239 Query 195 GLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLS----QGGQGFAIPIGQAMAIA 250 L+Q DA I G SGGP+ + G+VVG++TAAS L+ +G+AIPI QA +IA Sbjct 240 NLVQTDAPIVGGYSGGPLFDAAGKVVGIDTAASATNSLTGYQRSNAEGYAIPITQAKSIA 299 Query 251 GQIRSGGGSPTVHIGPTAFLGLGVVDNNG------NGARVQRVVGSAPAASLGISTGDVI 304 I +G + T HIG A LG+ VV ++ G VQ+V+ + AS G++ GD I Sbjct 300 DDILAGRKTTTNHIGAKAALGVAVVPSSSLRGASDTGVVVQQVLNGSAVASTGMTAGDTI 359 Query 305 TAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAE 351 TA+DG + S +++ + +PG I VTW SG + T +VTL + Sbjct 360 TALDGKAVTSTDSLSSLMGTRYPGSTIKVTWSDTSGASHTASVTLQK 406 >gi|326334041|ref|ZP_08200270.1| putative serine protease [Nocardioidaceae bacterium Broad-1] gi|325948190|gb|EGD40301.1| putative serine protease [Nocardioidaceae bacterium Broad-1] Length=374 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 123/297 (42%), Positives = 159/297 (54%), Gaps = 13/297 (4%) Query 63 VVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYD 122 VV ++T + Y A GAGTG+ I +G+V+TN+HV+ GAT I +G TY V+GYD Sbjct 87 VVLVSTTVDYGTARGAGTGLTITADGIVVTNHHVVEGATSITVTDPSAGTTYDATVLGYD 146 Query 123 RTQDVAVLQLRGAGGLPSAAIGGGVAV-GEPVVAMGNSGGQGGTPRAVPGRVV--ALGQT 179 DVAVLQL A GL + A A GE V ++GN+ GQ G+ A G V + T Sbjct 147 DVHDVAVLQLEDASGLSTVATDRDAATRGEQVTSVGNAEGQ-GSLSAADGTVTDPSTAIT 205 Query 180 VQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGF 239 V D G L LI+ DA + GDSGG +++ G+V+GMN AA+ S G+ Sbjct 206 VNNED---GTTADLTDLIETDADVVSGDSGGALLDEDGEVIGMNVAATSG---SADISGY 259 Query 240 AIPIGQAMAIAGQIRSGGGSPTVHI-GPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGI 298 AIPI + IA QI +G S V I GP A LG+ V + V VV A + GI Sbjct 260 AIPIDTVLDIAAQILAGEESGDVEIGGPAAALGVQV--DTTRSTLVVGVVEDGAAEAGGI 317 Query 299 STGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA 355 + G IT+VDG + S + L H PGD ISV W +G T VTL EGP A Sbjct 318 AEGSTITSVDGTAVASIDDITSVLGNHEPGDRISVGWTDAAGEAHTATVTLGEGPVA 374 >gi|289705249|ref|ZP_06501648.1| trypsin [Micrococcus luteus SK58] gi|289557999|gb|EFD51291.1| trypsin [Micrococcus luteus SK58] Length=393 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 113/302 (38%), Positives = 165/302 (55%), Gaps = 7/302 (2%) Query 50 LDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVG 109 LDP VA P ++ + T LG G GTG+V+ P+G+ +TN HV+ +++++ Sbjct 91 LDPGQPVAD-APGILLVETALGART--GTGTGMVLSPDGLTVTNYHVVEDSSEVHVVVAD 147 Query 110 SGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIG-GGVAVGEPVVAMGNSGGQGGTPRA 168 +G + V+G D D+AVL + G LP A++ V GE V A+GN GGQG A Sbjct 148 TGARHTATVLGRDAEHDIAVLDVEGVSDLPVASVSLDPVRRGETVAAVGNGGGQGYL-TA 206 Query 169 VPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASD 228 V G V+ +++ A+ T L+GLIQ DA + PG SGGPVV+ GQVVG+ AASD Sbjct 207 VRGTVLGTDRSIMAAAEGTDQYARLSGLIQTDADVVPGYSGGPVVDDAGQVVGVTVAASD 266 Query 229 NFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVV 288 + GFAIP+ A + Q+ SG + TV IG LG+ V + G V +V Sbjct 267 GTTADE-VDGFAIPLEVAFDVVDQVLSGEETDTVSIGADGALGIMVGADPDVGVVVMQVD 325 Query 289 GSAPAASLGISTGDVITAVDGAPI-NSATAMADALNGHHPGDVISVTWQTKSGGTRTGNV 347 + A +G+ GDVI ++G P+ + A+ M+ +N H+ GD I+V W+T G R Sbjct 326 AGSAAEQIGLVEGDVILEIEGRPVGDDASRMSRLVNDHNVGDRITVQWRTADGEVREAEA 385 Query 348 TL 349 L Sbjct 386 VL 387 >gi|239918048|ref|YP_002957606.1| trypsin-like serine protease with C-terminal PDZ domain [Micrococcus luteus NCTC 2665] gi|281415773|ref|ZP_06247515.1| trypsin-like serine protease with C-terminal PDZ domain [Micrococcus luteus NCTC 2665] gi|239839255|gb|ACS31052.1| trypsin-like serine protease with C-terminal PDZ domain [Micrococcus luteus NCTC 2665] Length=393 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 111/302 (37%), Positives = 163/302 (54%), Gaps = 7/302 (2%) Query 50 LDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVG 109 LDP VA P ++ + T LG G GTG+V+ P+G+ +TN HV+ +++++ Sbjct 91 LDPGQPVAD-APGILLVETALGART--GTGTGMVLSPDGLAVTNYHVVEDSSEVHVVVAD 147 Query 110 SGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIG-GGVAVGEPVVAMGNSGGQGGTPRA 168 +G + V+G D D+AVL + G LP A++ V GE V A+GN GGQG A Sbjct 148 TGARHTATVLGRDAEHDIAVLDVEGVSDLPVASVSLDPVRRGETVAAVGNGGGQGHL-TA 206 Query 169 VPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASD 228 V G V+ +++ A+ T L+GLIQ DA + PG SGGPVV+ GQVVG+ AASD Sbjct 207 VRGTVLGTDRSIMAAAEGTDQYARLSGLIQTDADVVPGYSGGPVVDDAGQVVGVTVAASD 266 Query 229 NFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNGARVQRVV 288 + GFAIP+ A + Q+ SG + TV IG LG+ V + G V +V Sbjct 267 GTTADE-VDGFAIPLEVAFDVVDQVLSGEETDTVSIGADGALGIMVGADPDVGVVVMQVD 325 Query 289 GSAPAASLGISTGDVITAVDGAPI-NSATAMADALNGHHPGDVISVTWQTKSGGTRTGNV 347 + A +G+ GDVI ++G + + A+ M+ +N H+ GD I+V W+T G Sbjct 326 AGSAAEQIGLVEGDVILEIEGRAVGDDASRMSRLVNDHNVGDRITVQWRTADGEVHEAEA 385 Query 348 TL 349 L Sbjct 386 VL 387 >gi|336178408|ref|YP_004583783.1| peptidase S1 and S6 chymotrypsin/Hap [Frankia symbiont of Datisca glomerata] gi|334859388|gb|AEH09862.1| peptidase S1 and S6 chymotrypsin/Hap [Frankia symbiont of Datisca glomerata] Length=426 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 107/251 (43%), Positives = 151/251 (61%), Gaps = 17/251 (6%) Query 48 LPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFS 107 +P SA +V P VV + +++ NA AGTG+V++ +G VLTNNHVIA A I Sbjct 103 VPAQLSAATDRVLPGVVRVFSRITSQNASAAGTGMVLNASGEVLTNNHVIANADAITVTV 162 Query 108 VGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGT 165 SG++Y VVG D DVAVL+L+GA GL + IG V V + V A+GN+ +GG Sbjct 163 TSSGRSYQASVVGTDMADDVAVLRLQGASGLAAVPIGDSSRVGVSDSVAAIGNA--EGGA 220 Query 166 PRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTA 225 P V GR+ AL Q++ A+DS G E L+GLI+ D AI+PG SGGP+V+ G+V+GM+TA Sbjct 221 PEVVSGRITALNQSITATDSDGGNPEDLSGLIKTDVAIRPGFSGGPLVSSAGEVIGMDTA 280 Query 226 ASD-NFQLSQGGQ-GFAIPIGQAMAIAGQIRSGGGSPTVHI-------GPTAFLGLGVVD 276 A+ N L G + G+AIPI A+++A + +G + I GP+A G GV Sbjct 281 ATAFNEYLPAGLRAGYAIPISHAISVASSLSAGKSAGKTAIVSAARVEGPSARSGSGVTV 340 Query 277 NNGNGARVQRV 287 + AR+ R+ Sbjct 341 D----ARLARL 347 >gi|256371520|ref|YP_003109344.1| peptidase S1 and S6 chymotrypsin/Hap [Acidimicrobium ferrooxidans DSM 10331] gi|256008104|gb|ACU53671.1| peptidase S1 and S6 chymotrypsin/Hap [Acidimicrobium ferrooxidans DSM 10331] Length=392 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/336 (39%), Positives = 176/336 (53%), Gaps = 43/336 (12%) Query 54 AMVAQVGPQVVNINTK---LGYNNAV--------------GAGTGIVIDPNGVVLTNNHV 96 A+V+ V P+VV+I+ +G N AGTG+++ +G+VLTNNHV Sbjct 62 AIVSSVLPEVVSIDATGDLIGVTNGGPFGLGGGQTGAEFKSAGTGMIVSTSGLVLTNNHV 121 Query 97 IAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQL-RGAGGLPSAAIGGGVAV--GEPV 153 IAGAT + G+ +VG + D+A+L++ L + G A+ G+ V Sbjct 122 IAGATSVAVTLDGTHTALPATIVGTIPSHDLALLRIDHPPAHLHTVTFGDSAALVPGDAV 181 Query 154 VAMGNSGG-QGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPV 212 +A+GN+ G Q G+P G V ALG+ V AS TG ETL+ +IQ DAAI PG+SGGP+ Sbjct 182 IAIGNALGLQAGSPTVTSGIVSALGRVVTASIPTTGQTETLDDMIQTDAAINPGNSGGPL 241 Query 213 VNGLGQVVGMNTAASDNFQLSQGGQ----GFAIPIGQAMAIAGQIRSGGGSPTVHIGPTA 268 V+ G VVGMNTAA+ S G Q GFAIP + +A + GG S P A Sbjct 242 VDSAGDVVGMNTAAAGT--TSDGTQAENIGFAIPSSELIAELPVLEHGGTSG----APGA 295 Query 269 FLGLGVVDNN-----------GNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATA 317 FLG+ V D++ GA V V+ AA G+S GDVI A DG + SA A Sbjct 296 FLGVEVEDDSSALAAQFGLPVSQGAVVVSVLPGTAAAQAGLSAGDVIVAFDGHKVTSAAA 355 Query 318 MADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGP 353 + HPGD +S+++ T S RT VTL P Sbjct 356 LGAIEETLHPGDQVSLSYWTSS-SERTVTVTLGTRP 390 >gi|269929247|ref|YP_003321568.1| HtrA2 peptidase [Sphaerobacter thermophilus DSM 20745] gi|269788604|gb|ACZ40746.1| HtrA2 peptidase [Sphaerobacter thermophilus DSM 20745] Length=401 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 120/320 (38%), Positives = 171/320 (54%), Gaps = 21/320 (6%) Query 33 APP--ALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAV-----GAGTGIVID 85 APP A++Q DF + S V QV + T+ N G G+G++ D Sbjct 67 APPNVAVAQPLSGDFIGAVIAVSQRVKPAVVQVTSEQTRFDLFNQPFTVPGGVGSGVIYD 126 Query 86 PNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIG- 144 +G +LTN HVIAGA + S+ G+++ DVVG D D+AVL++ G LP+A +G Sbjct 127 QDGYILTNYHVIAGAESLR-VSLPDGRSFPADVVGTDPQTDLAVLKIDGED-LPTAPLGD 184 Query 145 -GGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAI 203 + VGE VVA+GN+ G P G V AL +TVQ A L +IQ DAAI Sbjct 185 SNKLQVGEWVVAIGNALALPGGPTVTVGVVSALNRTVQEPGEGGRAGPFLFNVIQTDAAI 244 Query 204 QPGDSGGPVVNGLGQVVGMNTAASDNFQ--LSQGGQGFAIPIGQAMAIAGQIRSGGGSPT 261 PG+SGGP+VN G+V+G+NT + Q L G GFA+ I +A +I + G Sbjct 245 NPGNSGGPLVNLAGEVIGINTLVAGTTQSGLQAEGIGFALAISTVKPLADEIVATGQVTH 304 Query 262 VHIG-------PTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINS 314 +IG P LG ++ +GA V VVG +PA G+ DVIT +DG P+ + Sbjct 305 PYIGIRYTQLTPAIAAQLG-IEGATSGAVVIEVVGGSPAEEAGLQPRDVITEIDGQPLTT 363 Query 315 ATAMADALNGHHPGDVISVT 334 +++A+ +N H PGD I++T Sbjct 364 ESSLAEIINTHRPGDTITLT 383 >gi|240169346|ref|ZP_04748005.1| heat shock protein HtrA, putative [Mycobacterium kansasii ATCC 12478] Length=364 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 125/326 (39%), Positives = 180/326 (56%), Gaps = 30/326 (9%) Query 43 ADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATD 102 A+ PA ++ A A+V P VV + T LG A G+G+++ +G++LTNNHV+A A Sbjct 49 ANMPAGSVEQVA--AKVVPSVVMLETDLGR--ASEEGSGVILSSDGLILTNNHVVAAAAK 104 Query 103 I--------NAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEP 152 + G+T VVG D T D+AV++++G GL ++G + VG+P Sbjct 105 PPAGAPPPKTTVTFSDGRTAPFTVVGADPTSDIAVIKVQGVSGLTPISLGSSSDLRVGQP 164 Query 153 VVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPV 212 V+A+G+ G GT G V AL + V + G + T+ IQ DAAI PG+SGG + Sbjct 165 VLAIGSPLGLAGT--VTTGIVSALNRPVSTTGE-AGNQNTVLDAIQTDAAINPGNSGGAL 221 Query 213 VNGLGQVVGMNTAA------SDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGP 266 VN GQ+VG+N+A S + Q G GFAIP+ QA IA ++ S G + H Sbjct 222 VNMNGQLVGINSAIATLGADSGDAQSGSIGLGFAIPVDQAKRIADELISTGKA--TH--- 276 Query 267 TAFLGLGVVDNNG-NGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGH 325 A LG+ V + G GA+V VV AA+ G+ G ++T VD PINSA A+ A+ Sbjct 277 -ASLGVQVTTDKGIPGAKVVEVVQGGAAATAGVPKGVIVTKVDERPINSADALVAAVRSK 335 Query 326 HPGDVISVTWQTKSGGTRTGNVTLAE 351 PGD + +T+Q SGG+RT VTL + Sbjct 336 APGDKVVLTFQDPSGGSRTVQVTLGK 361 Lambda K H 0.314 0.133 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 663860846620 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40