BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0138 Length=167 Score E Sequences producing significant alignments: (Bits) Value gi|15607280|ref|NP_214652.1| hypothetical protein Rv0138 [Mycoba... 348 1e-94 gi|148821330|ref|YP_001286084.1| hypothetical protein TBFG_10139... 348 2e-94 gi|340625173|ref|YP_004743625.1| hypothetical protein MCAN_01411... 347 4e-94 gi|31791316|ref|NP_853809.1| hypothetical protein Mb0143 [Mycoba... 345 9e-94 gi|183980379|ref|YP_001848670.1| hypothetical protein MMAR_0348 ... 298 2e-79 gi|118619829|ref|YP_908161.1| hypothetical protein MUL_4772 [Myc... 298 2e-79 gi|296167328|ref|ZP_06849730.1| conserved hypothetical protein [... 291 2e-77 gi|240168141|ref|ZP_04746800.1| hypothetical protein MkanA1_0242... 287 4e-76 gi|333988727|ref|YP_004521341.1| hypothetical protein JDM601_008... 276 8e-73 gi|118464206|ref|YP_884275.1| hypothetical protein MAV_5158 [Myc... 275 2e-72 gi|254777500|ref|ZP_05219016.1| hypothetical protein MaviaA2_229... 275 2e-72 gi|41409653|ref|NP_962489.1| hypothetical protein MAP3555 [Mycob... 273 6e-72 gi|342859430|ref|ZP_08716084.1| hypothetical protein MCOL_11138 ... 271 3e-71 gi|118470028|ref|YP_890688.1| hypothetical protein MSMEG_6475 [M... 265 2e-69 gi|254822369|ref|ZP_05227370.1| hypothetical protein MintA_20721... 263 5e-69 gi|126438032|ref|YP_001073723.1| hypothetical protein Mjls_5469 ... 263 7e-69 gi|108802053|ref|YP_642250.1| hypothetical protein Mmcs_5090 [My... 261 2e-68 gi|145221699|ref|YP_001132377.1| hypothetical protein Mflv_1107 ... 248 1e-64 gi|120406648|ref|YP_956477.1| hypothetical protein Mvan_5706 [My... 247 4e-64 gi|262203778|ref|YP_003274986.1| hypothetical protein Gbro_3917 ... 221 2e-56 gi|343926084|ref|ZP_08765596.1| hypothetical protein GOALK_053_0... 209 1e-52 gi|326384892|ref|ZP_08206567.1| hypothetical protein SCNU_18202 ... 201 4e-50 gi|111022887|ref|YP_705859.1| hypothetical protein RHA1_ro05924 ... 182 1e-44 gi|226307687|ref|YP_002767647.1| hypothetical protein RER_42000 ... 173 7e-42 gi|226365395|ref|YP_002783178.1| hypothetical protein ROP_59860 ... 173 8e-42 gi|229493870|ref|ZP_04387642.1| conserved hypothetical protein [... 172 1e-41 gi|312138831|ref|YP_004006167.1| hypothetical protein REQ_13980 ... 164 3e-39 gi|325676469|ref|ZP_08156147.1| hypothetical protein HMPREF0724_... 163 8e-39 gi|54025329|ref|YP_119571.1| hypothetical protein nfa33600 [Noca... 159 2e-37 gi|169629016|ref|YP_001702665.1| hypothetical protein MAB_1928c ... 155 2e-36 gi|289568032|ref|ZP_06448259.1| LOW QUALITY PROTEIN: conserved h... 144 6e-33 gi|169630047|ref|YP_001703696.1| hypothetical protein MAB_2964 [... 128 3e-28 gi|254483153|ref|ZP_05096386.1| hypothetical protein GPB2148_339... 118 3e-25 gi|118464577|ref|YP_881962.1| hypothetical protein MAV_2774 [Myc... 90.1 1e-16 gi|254775253|ref|ZP_05216769.1| hypothetical protein MaviaA2_113... 90.1 1e-16 gi|41407748|ref|NP_960584.1| hypothetical protein MAP1650 [Mycob... 90.1 1e-16 gi|342859581|ref|ZP_08716234.1| hypothetical protein MCOL_11898 ... 89.7 1e-16 gi|254820895|ref|ZP_05225896.1| hypothetical protein MintA_13255... 89.7 1e-16 gi|296164960|ref|ZP_06847515.1| conserved hypothetical protein [... 89.7 1e-16 gi|183982854|ref|YP_001851145.1| hypothetical protein MMAR_2850 ... 89.0 2e-16 gi|118618321|ref|YP_906653.1| hypothetical protein MUL_2907 [Myc... 86.3 1e-15 gi|213649555|ref|ZP_03379608.1| hypothetical protein SentesTy_20... 77.8 5e-13 gi|254820044|ref|ZP_05225045.1| hypothetical protein MintA_08966... 62.0 3e-08 gi|126436753|ref|YP_001072444.1| hypothetical protein Mjls_4181 ... 61.6 3e-08 gi|84495208|ref|ZP_00994327.1| hypothetical protein JNB_10419 [J... 58.5 3e-07 gi|118464300|ref|YP_881829.1| hypothetical protein MAV_2637 [Myc... 57.8 5e-07 gi|148554966|ref|YP_001262548.1| hypothetical protein Swit_2051 ... 57.8 6e-07 gi|111222793|ref|YP_713587.1| hypothetical protein FRAAL3378 [Fr... 57.4 7e-07 gi|226366567|ref|YP_002784350.1| hypothetical protein ROP_71580 ... 57.0 8e-07 gi|118463809|ref|YP_881155.1| hypothetical protein MAV_1936 [Myc... 56.2 1e-06 >gi|15607280|ref|NP_214652.1| hypothetical protein Rv0138 [Mycobacterium tuberculosis H37Rv] gi|15839519|ref|NP_334556.1| hypothetical protein MT0146 [Mycobacterium tuberculosis CDC1551] gi|121636050|ref|YP_976273.1| hypothetical protein BCG_0174 [Mycobacterium bovis BCG str. Pasteur 1173P2] 72 more sequence titles Length=167 Score = 348 bits (893), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 166/167 (99%), Positives = 167/167 (100%), Gaps = 0/167 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +SASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA Sbjct 1 MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG Sbjct 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP Sbjct 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 >gi|148821330|ref|YP_001286084.1| hypothetical protein TBFG_10139 [Mycobacterium tuberculosis F11] gi|148719857|gb|ABR04482.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] Length=167 Score = 348 bits (892), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 165/167 (99%), Positives = 167/167 (100%), Gaps = 0/167 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +SASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA Sbjct 1 MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNIS+ITYAG Sbjct 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISVITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP Sbjct 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 >gi|340625173|ref|YP_004743625.1| hypothetical protein MCAN_01411 [Mycobacterium canettii CIPT 140010059] gi|340003363|emb|CCC42482.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=167 Score = 347 bits (889), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 165/167 (99%), Positives = 166/167 (99%), Gaps = 0/167 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +SASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAG MRGRQRVRA Sbjct 1 MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGTMRGRQRVRA 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG Sbjct 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP Sbjct 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 >gi|31791316|ref|NP_853809.1| hypothetical protein Mb0143 [Mycobacterium bovis AF2122/97] gi|31616901|emb|CAD93007.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=167 Score = 345 bits (886), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 165/167 (99%), Positives = 166/167 (99%), Gaps = 0/167 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +SASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA Sbjct 1 MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICEL NPMLDPGDGSVISATNISIITYAG Sbjct 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELGNPMLDPGDGSVISATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP Sbjct 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP 167 >gi|183980379|ref|YP_001848670.1| hypothetical protein MMAR_0348 [Mycobacterium marinum M] gi|183173705|gb|ACC38815.1| conserved hypothetical protein [Mycobacterium marinum M] Length=168 Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 140/166 (85%), Positives = 153/166 (93%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 ++ EFSR+ELAAAFEKFE TVARAAA+RDWD WVQHYTPDVEYIEHAAG M GR++VRA Sbjct 1 MNGPEFSRSELAAAFEKFEDTVARAAASRDWDAWVQHYTPDVEYIEHAAGTMHGREQVRA 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI +TMTTFPGSHMVAFPSLWSVIDESTGRII ELDNPM DPGDGSVISATNISIITYAG Sbjct 61 WIWQTMTTFPGSHMVAFPSLWSVIDESTGRIILELDNPMRDPGDGSVISATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +GQWCRQEDIYNPLRFLRA +KWCRKA ELGT+DE AA WM+++GG Sbjct 121 DGQWCRQEDIYNPLRFLRAGLKWCRKAAELGTIDEAAANWMQQYGG 166 >gi|118619829|ref|YP_908161.1| hypothetical protein MUL_4772 [Mycobacterium ulcerans Agy99] gi|118571939|gb|ABL06690.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=168 Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 140/166 (85%), Positives = 152/166 (92%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +S EFSR+ELAAAFEKFE TV RAAA+RDWD WVQHYTPDVEYIEHAAG M GR++VRA Sbjct 1 MSGPEFSRSELAAAFEKFEDTVVRAAASRDWDAWVQHYTPDVEYIEHAAGTMHGREQVRA 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI +TMTTFPGSHMVAFPSLWSVIDESTGRII ELDNPM DPGDGSVISATNISIITYAG Sbjct 61 WIWQTMTTFPGSHMVAFPSLWSVIDESTGRIILELDNPMRDPGDGSVISATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +GQWCRQEDIYNPLRFLRA +KWCRKA ELGT+DE AA WM+++GG Sbjct 121 DGQWCRQEDIYNPLRFLRAGLKWCRKAAELGTIDEAAANWMQQYGG 166 >gi|296167328|ref|ZP_06849730.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897272|gb|EFG76876.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=190 Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 135/166 (82%), Positives = 148/166 (90%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 ++ EFSR+EL+ AFEKFE+TVARAA T DWD WV+ YTPDVEY+EHAAG MRGR VR Sbjct 23 MTTQEFSRSELSDAFEKFEQTVARAAETHDWDAWVEQYTPDVEYVEHAAGTMRGRDEVRQ 82 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI+ TMTT+PGSHMVAFPSLWSVIDE TGR+ICELDNPM DPGDGSVISATNISI+TYAG Sbjct 83 WIKRTMTTYPGSHMVAFPSLWSVIDEPTGRVICELDNPMRDPGDGSVISATNISIVTYAG 142 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G W RQEDIYNPLRFLRA MKWCRKAQELGTLDEDAARWMR +GG Sbjct 143 DGLWRRQEDIYNPLRFLRAGMKWCRKAQELGTLDEDAARWMRENGG 188 >gi|240168141|ref|ZP_04746800.1| hypothetical protein MkanA1_02422 [Mycobacterium kansasii ATCC 12478] Length=168 Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 134/161 (84%), Positives = 148/161 (92%), Gaps = 0/161 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 FSR EL+AAF +FE+TVARAA TR+WD WV YTPDVEYIEHAAG M GR++VRAWIQ+T Sbjct 6 FSRDELSAAFGEFERTVARAAQTRNWDDWVDQYTPDVEYIEHAAGTMHGREQVRAWIQQT 65 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 M+TFPGSHMVAFPSLWSVIDESTGRII ELDNPM DPGDGSVISATNISIITYAG+GQWC Sbjct 66 MSTFPGSHMVAFPSLWSVIDESTGRIIMELDNPMRDPGDGSVISATNISIITYAGHGQWC 125 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 RQEDIYNPLRFL+A + WCRKAQ LGTLDEDAA+WM+R+GG Sbjct 126 RQEDIYNPLRFLKAGLTWCRKAQALGTLDEDAAQWMQRYGG 166 >gi|333988727|ref|YP_004521341.1| hypothetical protein JDM601_0087 [Mycobacterium sp. JDM601] gi|333484695|gb|AEF34087.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=168 Score = 276 bits (705), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 125/166 (76%), Positives = 146/166 (88%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 ++ +FSRAELAAAFE FE+TVARAA T+DWD WV HYTPDVEY+EHA G M GR+ VR Sbjct 1 MTNPQFSRAELAAAFEIFEQTVARAAETKDWDAWVSHYTPDVEYVEHAMGTMHGREEVRP 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI++TM+TFPGS+M FPSLW+VIDE+ GRIICELDNPM DPGDG+VISATNISI+TYAG Sbjct 61 WIRQTMSTFPGSYMTEFPSLWTVIDEARGRIICELDNPMRDPGDGTVISATNISIVTYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G WCRQEDIYNPLRF+ A MKWCRKAQELGTLD++AA WM++ GG Sbjct 121 DGLWCRQEDIYNPLRFVAATMKWCRKAQELGTLDDEAAAWMKQFGG 166 >gi|118464206|ref|YP_884275.1| hypothetical protein MAV_5158 [Mycobacterium avium 104] gi|118165493|gb|ABK66390.1| conserved hypothetical protein [Mycobacterium avium 104] Length=168 Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 126/166 (76%), Positives = 143/166 (87%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +S+ +FSR+EL AF KFE TV AA + DWD WV+HYTPDVEY+EHAAG M GR VR Sbjct 1 MSSPQFSRSELVDAFAKFEATVDAAAQSHDWDAWVEHYTPDVEYVEHAAGTMHGRDEVRQ 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI+ TMTT+PGSHMVAFPSLWSV+DE GRIICELDNPM DPGDGSVI+ATNISIITYAG Sbjct 61 WIKRTMTTYPGSHMVAFPSLWSVVDEERGRIICELDNPMKDPGDGSVITATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G W RQED+YNPLRFLRAAMKWCRKAQ LGTLD+ AA+WMR++GG Sbjct 121 DGLWSRQEDVYNPLRFLRAAMKWCRKAQALGTLDDAAAQWMRQNGG 166 >gi|254777500|ref|ZP_05219016.1| hypothetical protein MaviaA2_22916 [Mycobacterium avium subsp. avium ATCC 25291] Length=168 Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 126/166 (76%), Positives = 143/166 (87%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +S+ +FSR+EL AF KFE TV AA + DWD WV+HYTPDVEY+EHAAG M GR VR Sbjct 1 MSSPQFSRSELVDAFAKFEATVDAAAQSHDWDAWVEHYTPDVEYVEHAAGTMHGRDEVRQ 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI+ TMTT+PGSHMVAFPSLWSV+DE GRIICELDNPM DPGDGSVI+ATNISIITYAG Sbjct 61 WIKRTMTTYPGSHMVAFPSLWSVVDEERGRIICELDNPMKDPGDGSVITATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G W RQED+YNPLRFLRAAMKWCRKAQ LGTLD+ AA+WMR++GG Sbjct 121 DGLWSRQEDVYNPLRFLRAAMKWCRKAQTLGTLDDAAAQWMRQNGG 166 >gi|41409653|ref|NP_962489.1| hypothetical protein MAP3555 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398485|gb|AAS06105.1| hypothetical protein MAP_3555 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459908|gb|EGO38820.1| hypothetical protein MAPs_45510 [Mycobacterium avium subsp. paratuberculosis S397] Length=168 Score = 273 bits (698), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 125/166 (76%), Positives = 142/166 (86%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +S+ +FSR+EL AF FE TV AA + DWD WV+HYTPDVEY+EHAAG M GR VR Sbjct 1 MSSPQFSRSELVDAFANFEATVDAAAQSHDWDAWVEHYTPDVEYVEHAAGTMHGRDEVRQ 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI+ TMTT+PGSHMVAFPSLWSV+DE GRIICELDNPM DPGDGSVI+ATNISIITYAG Sbjct 61 WIKRTMTTYPGSHMVAFPSLWSVVDEERGRIICELDNPMKDPGDGSVITATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G W RQED+YNPLRFLRAAMKWCRKAQ LGTLD+ AA+WMR++GG Sbjct 121 DGLWSRQEDVYNPLRFLRAAMKWCRKAQALGTLDDAAAQWMRQNGG 166 >gi|342859430|ref|ZP_08716084.1| hypothetical protein MCOL_11138 [Mycobacterium colombiense CECT 3035] gi|342133671|gb|EGT86874.1| hypothetical protein MCOL_11138 [Mycobacterium colombiense CECT 3035] Length=168 Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 126/166 (76%), Positives = 142/166 (86%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +++ +FSR+ELAAAFEKFE TV AA + DWD WVQHYTPDV YIEHAAG M GR VR Sbjct 1 MNSPQFSRSELAAAFEKFEATVDAAAQSHDWDAWVQHYTPDVVYIEHAAGTMHGRDEVRE 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI +TM +FPGSHMVAFPSLWSVIDE TGRII ELDNPM DPGDG+VI ATNISIITYAG Sbjct 61 WISKTMGSFPGSHMVAFPSLWSVIDEPTGRIIMELDNPMRDPGDGTVIGATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G WC+QEDIYNPLRF++A +KWCRKAQELGTLD DAAR+M + GG Sbjct 121 DGLWCQQEDIYNPLRFVQATLKWCRKAQELGTLDADAARFMEQFGG 166 >gi|118470028|ref|YP_890688.1| hypothetical protein MSMEG_6475 [Mycobacterium smegmatis str. MC2 155] gi|118171315|gb|ABK72211.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=166 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 119/163 (74%), Positives = 141/163 (87%), Gaps = 0/163 (0%) Query 4 SEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQ 63 S FSR EL+AAF +FE TV AA T+DWD WV+HYTPDV+Y+EHAAG M+GR+ VRAWI Sbjct 2 SRFSRDELSAAFARFEATVDTAARTKDWDVWVRHYTPDVDYVEHAAGTMKGREEVRAWIW 61 Query 64 ETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQ 123 +TMT+FPG+HM AFPSLW+VIDE TGR+ICELDNPM+DPGDG++ISATNISI+TYAG+G Sbjct 62 KTMTSFPGNHMTAFPSLWTVIDEPTGRVICELDNPMVDPGDGTIISATNISILTYAGDGL 121 Query 124 WCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 W RQED+YNPLRF AAMKWCRKA ELGTL ++AA WM + GG Sbjct 122 WSRQEDVYNPLRFASAAMKWCRKAAELGTLTDEAAEWMAKFGG 164 >gi|254822369|ref|ZP_05227370.1| hypothetical protein MintA_20721 [Mycobacterium intracellulare ATCC 13950] Length=168 Score = 263 bits (673), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 123/166 (75%), Positives = 140/166 (85%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +S +FSR+ELAAAFE+FE TV AA + DWD WVQHYTPDV YIEHAAG M GR VR Sbjct 1 MSTPKFSRSELAAAFEQFEATVDAAAQSHDWDAWVQHYTPDVLYIEHAAGTMHGRDEVRE 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI TM +FPGSHMVAFPSLWSVIDE+TGRII ELDNPM DPGDG+VI ATNISIITYAG Sbjct 61 WISRTMGSFPGSHMVAFPSLWSVIDEATGRIIMELDNPMRDPGDGTVIGATNISIITYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G W +QEDIYNPLRF++A +KWCRKAQELGTLDE A++M ++GG Sbjct 121 DGLWRQQEDIYNPLRFVQATLKWCRKAQELGTLDEAGAQFMEQYGG 166 >gi|126438032|ref|YP_001073723.1| hypothetical protein Mjls_5469 [Mycobacterium sp. JLS] gi|126237832|gb|ABO01233.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=180 Score = 263 bits (672), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 119/162 (74%), Positives = 139/162 (86%), Gaps = 0/162 (0%) Query 4 SEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQ 63 + F+RAEL AAF FE+TVA AA TRDWD WV+ YTPDV YIEHAAG MRGR+ VR WI Sbjct 7 ARFTRAELTAAFATFEETVAHAAQTRDWDPWVEQYTPDVLYIEHAAGTMRGREEVRTWIW 66 Query 64 ETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQ 123 +TMT+FPGS+M AFPSLWSV DE +GRIICELDNPM DPGDG++ISATNISI+TYAG+GQ Sbjct 67 KTMTSFPGSYMTAFPSLWSVADEESGRIICELDNPMRDPGDGTIISATNISIVTYAGDGQ 126 Query 124 WCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 W RQED+YNPLRF++A MKWCRKA ELGTL ++AA WM ++G Sbjct 127 WSRQEDVYNPLRFVKATMKWCRKAAELGTLTDEAAAWMEKYG 168 >gi|108802053|ref|YP_642250.1| hypothetical protein Mmcs_5090 [Mycobacterium sp. MCS] gi|119871205|ref|YP_941157.1| hypothetical protein Mkms_5178 [Mycobacterium sp. KMS] gi|108772472|gb|ABG11194.1| hypothetical protein Mmcs_5090 [Mycobacterium sp. MCS] gi|119697294|gb|ABL94367.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=190 Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 118/160 (74%), Positives = 137/160 (86%), Gaps = 0/160 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F+RAEL AAF FE+TVA AA TRDWD WV+ YTPDV Y+EHAAG MRGR VR WI +T Sbjct 9 FTRAELTAAFATFEETVAHAAQTRDWDPWVEQYTPDVLYVEHAAGTMRGRDEVRTWIWKT 68 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 MT+FPGS+M AFPSLWSV DE +GRIICELDNPM DPGDG++ISATNISI+TYAG+GQW Sbjct 69 MTSFPGSYMTAFPSLWSVADEESGRIICELDNPMRDPGDGTIISATNISIVTYAGDGQWS 128 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 RQED+YNPLRF++A MKWCRKA ELGTL ++AA WM ++G Sbjct 129 RQEDVYNPLRFVKATMKWCRKAAELGTLTDEAAAWMEQYG 168 >gi|145221699|ref|YP_001132377.1| hypothetical protein Mflv_1107 [Mycobacterium gilvum PYR-GCK] gi|315446563|ref|YP_004079442.1| hypothetical protein Mspyr1_50800 [Mycobacterium sp. Spyr1] gi|145214185|gb|ABP43589.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315264866|gb|ADU01608.1| hypothetical protein Mspyr1_50800 [Mycobacterium sp. Spyr1] Length=168 Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 115/166 (70%), Positives = 138/166 (84%), Gaps = 0/166 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 ++ S FSR EL AF FE TV RAA TRDWD WV YT D+ YIEHAAG MRGR++VR Sbjct 1 MTGSTFSRDELVEAFAVFEGTVDRAAQTRDWDPWVDQYTDDILYIEHAAGTMRGREQVRP 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI +TM +FPG++M +FPSLW VIDE TGRIICELDNPM DPGDG++ISATNISI+TYAG Sbjct 61 WIWKTMESFPGNYMTSFPSLWHVIDEDTGRIICELDNPMRDPGDGTIISATNISILTYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 +G+W +QEDIYNPLRF+ AA+KWCRKA+ELGTL ++AA WM ++GG Sbjct 121 DGRWRQQEDIYNPLRFVSAAVKWCRKAEELGTLPDEAAEWMAKYGG 166 >gi|120406648|ref|YP_956477.1| hypothetical protein Mvan_5706 [Mycobacterium vanbaalenii PYR-1] gi|119959466|gb|ABM16471.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=172 Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 114/163 (70%), Positives = 136/163 (84%), Gaps = 0/163 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 ++ + F+R ELA AF FEKTV RAA TRDWD WV YT D+ YIEHAAG MRGR VR Sbjct 1 MTGNTFTRDELAEAFAGFEKTVDRAAQTRDWDPWVDQYTDDILYIEHAAGTMRGRDEVRP 60 Query 61 WIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG 120 WI +TM +FPGS+M +FPSLWSVIDE+T RIICELDNPM DPGDG++ISATNISI+TYAG Sbjct 61 WIWKTMESFPGSYMTSFPSLWSVIDEATARIICELDNPMRDPGDGTIISATNISILTYAG 120 Query 121 NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRR 163 +G+W RQEDIYNPLRF+ A +KWCRKA+ELGTL ++AA+WM + Sbjct 121 DGKWKRQEDIYNPLRFVSATVKWCRKAEELGTLPDEAAQWMAK 163 >gi|262203778|ref|YP_003274986.1| hypothetical protein Gbro_3917 [Gordonia bronchialis DSM 43247] gi|262087125|gb|ACY23093.1| hypothetical protein Gbro_3917 [Gordonia bronchialis DSM 43247] Length=173 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 99/163 (61%), Positives = 125/163 (77%), Gaps = 0/163 (0%) Query 4 SEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQ 63 ++F+ AEL AF F+ TVA A +RDWD + +TPD +YIEHA G M GR+ +RAWI Sbjct 3 AQFTAAELDTAFRDFQHTVAEIAVSRDWDRFADLFTPDADYIEHALGTMHGREEIRAWIW 62 Query 64 ETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQ 123 +TMT FPGSHMV +PSLW V+D T R+ICE+DNPM DPGDGSVI+ATNI+I+TYAG+G Sbjct 63 KTMTAFPGSHMVGYPSLWHVVDAPTARVICEVDNPMRDPGDGSVITATNITILTYAGDGL 122 Query 124 WCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 W R+ED+YNP+ F +AAM+WC KA+ELGTLD+ A WM G Sbjct 123 WSREEDVYNPMEFGQAAMRWCEKARELGTLDDAAEAWMSSVGA 165 >gi|343926084|ref|ZP_08765596.1| hypothetical protein GOALK_053_00420 [Gordonia alkanivorans NBRC 16433] gi|343764010|dbj|GAA12522.1| hypothetical protein GOALK_053_00420 [Gordonia alkanivorans NBRC 16433] Length=183 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 93/160 (59%), Positives = 118/160 (74%), Gaps = 0/160 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 FS EL AF F++TVA AA DWD + +T D +++EHA G MRGR+ +RAW T Sbjct 14 FSADELNEAFAGFQRTVAEVAAGGDWDRYADMFTEDADFVEHALGTMRGREEIRAWAWRT 73 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 MT FPGSHM +FPSLW V+D T R+ICE+DNPM DPGD S+I+ATNI+I+TYAG+G W Sbjct 74 MTAFPGSHMTSFPSLWHVVDAPTSRVICEVDNPMRDPGDQSLITATNITILTYAGDGLWN 133 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 ++ED+YNP+ F RAAM+WC KA+E G LDE A +WM G Sbjct 134 KEEDVYNPMEFGRAAMRWCEKAREFGNLDEAAEQWMTTTG 173 >gi|326384892|ref|ZP_08206567.1| hypothetical protein SCNU_18202 [Gordonia neofelifaecis NRRL B-59395] gi|326196411|gb|EGD53610.1| hypothetical protein SCNU_18202 [Gordonia neofelifaecis NRRL B-59395] Length=170 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 86/160 (54%), Positives = 115/160 (72%), Gaps = 0/160 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F+ EL AF +F+KT A A ++DWD W +T D YIEHA G GR+ +R W+++T Sbjct 5 FTAEELNDAFAQFQKTTAEVAISQDWDRWADQFTVDATYIEHAYGKFNGREEIRTWVKKT 64 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 M +FPGSHM +PS+W V D STGR+ICE+DNPM DPGDGSV +ATNI+I+TYAG+G W Sbjct 65 MHSFPGSHMAEYPSIWHVADPSTGRVICEIDNPMKDPGDGSVFTATNITILTYAGDGLWS 124 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 +ED+YNP+ F A+ WC +A ELGTLD+ +W+ + G Sbjct 125 CEEDVYNPMEFGLMALAWCDRAAELGTLDDAGRKWLEKTG 164 >gi|111022887|ref|YP_705859.1| hypothetical protein RHA1_ro05924 [Rhodococcus jostii RHA1] gi|110822417|gb|ABG97701.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=167 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 84/161 (53%), Positives = 109/161 (68%), Gaps = 0/161 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 +SRAEL AF +++TV+R DW+ + +T D Y+EHA G GR+ +R W+ T Sbjct 3 WSRAELEEAFAHYQRTVSRCVELGDWNGFADLFTEDATYVEHAFGDFDGREAIRKWVTRT 62 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 M+ FPGS M AFP+ W VIDE G +ICE+DNPM DPGDGS +A NI+I+ YAG+ W Sbjct 63 MSAFPGSRMTAFPANWYVIDEDRGWVICEIDNPMEDPGDGSEHAAANITILHYAGDNLWS 122 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGG 166 R+ED YNP+ FL AA KWCR A+ GTL +DA W+ R GG Sbjct 123 REEDAYNPMNFLAAAKKWCRAAEAAGTLPDDAREWLTRMGG 163 >gi|226307687|ref|YP_002767647.1| hypothetical protein RER_42000 [Rhodococcus erythropolis PR4] gi|226186804|dbj|BAH34908.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=166 Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 78/160 (49%), Positives = 102/160 (64%), Gaps = 0/160 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 ++R EL AF ++ TV + DW+ + +T DV Y+EHA G + GR+ VR W+ T Sbjct 3 WTRTELEDAFAGYQNTVVECTRSGDWNAFADMFTEDVVYVEHAFGTLNGREAVRKWVTRT 62 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 MT FPG M FP+ W V+DE G I+CE+DNPM DPGDGS A NI+I+ YAGNG W Sbjct 63 MTEFPGHRMTEFPANWFVVDEQRGWIVCEIDNPMEDPGDGSKHGAANITILHYAGNGLWS 122 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 R+ED YNP+ FL A WC A+ GTL +DA W+ + G Sbjct 123 REEDAYNPMNFLSMAKAWCLAAEAAGTLPDDAKAWLAKFG 162 >gi|226365395|ref|YP_002783178.1| hypothetical protein ROP_59860 [Rhodococcus opacus B4] gi|226243885|dbj|BAH54233.1| hypothetical protein [Rhodococcus opacus B4] Length=167 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 78/158 (50%), Positives = 103/158 (66%), Gaps = 0/158 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 +SRAEL AF +++TV R DWD + +T + Y+EHA G GR+ +R W+ T Sbjct 3 WSRAELDEAFAHYQRTVGRCVELGDWDGFADLFTENATYVEHAFGHFAGREAIRTWVTRT 62 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 M+ FPG+ M FP+ W VIDE G +ICE+DNPM DPGDGS +A NI+I+ YAG+ W Sbjct 63 MSAFPGNRMTEFPANWYVIDEDRGWVICEIDNPMEDPGDGSQHAAANITILHYAGDNLWS 122 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRR 163 R+ED YNP+ FL A KWCR A+ G L EDA W+ + Sbjct 123 REEDAYNPMNFLATAKKWCRAAESAGNLPEDAREWLSK 160 >gi|229493870|ref|ZP_04387642.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319147|gb|EEN84996.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=166 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 78/160 (49%), Positives = 101/160 (64%), Gaps = 0/160 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 ++R EL AF ++ TV + DW+ + +T DV Y+EHA G + GR+ VR W+ T Sbjct 3 WTRTELEDAFAGYQNTVVECTRSGDWNAFADMFTEDVVYVEHAFGTLNGREAVRKWVTRT 62 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 MT FPG M FP+ W V+DE G I+CE+DNPM DPGDGS A NI+I+ YAGNG W Sbjct 63 MTEFPGHRMTEFPANWFVVDEQRGWIVCEIDNPMEDPGDGSKHGAANITILHYAGNGLWS 122 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 R+ED YNP+ FL A WC A GTL +DA W+ + G Sbjct 123 REEDAYNPMNFLSMAKAWCLAADAAGTLPDDAKAWLAKFG 162 >gi|312138831|ref|YP_004006167.1| hypothetical protein REQ_13980 [Rhodococcus equi 103S] gi|311888170|emb|CBH47482.1| hypothetical protein REQ_13980 [Rhodococcus equi 103S] Length=166 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 74/158 (47%), Positives = 98/158 (63%), Gaps = 0/158 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 ++R EL AFE ++KTV RA T DW+ + +T D Y+EHA G GR+ +R W+ T Sbjct 3 WTREELEGAFENYQKTVVRATQTGDWNLFADMFTEDATYLEHAFGRFEGREEIRRWVTRT 62 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 MT FPG+ M FP+ W V+D G +ICE+ NPM DPGDG+ A NI+I+ YAG+ W Sbjct 63 MTAFPGNRMPEFPASWHVVDVERGWVICEIQNPMEDPGDGTEHGAANITILHYAGDDLWS 122 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRR 163 +ED YNP+ F A KWC A+ G L EDA W + Sbjct 123 HEEDAYNPMNFFAMAKKWCEHAEAAGNLPEDARVWREK 160 >gi|325676469|ref|ZP_08156147.1| hypothetical protein HMPREF0724_13930 [Rhodococcus equi ATCC 33707] gi|325552647|gb|EGD22331.1| hypothetical protein HMPREF0724_13930 [Rhodococcus equi ATCC 33707] Length=166 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 73/158 (47%), Positives = 98/158 (63%), Gaps = 0/158 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 ++R EL AFE ++KTV RA T DW+ + +T D Y+EHA G GR+ +R W+ T Sbjct 3 WTREELEGAFENYQKTVVRATQTGDWNLFADMFTEDATYLEHAFGRFEGREEIRRWVTRT 62 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 MT FPG+ M FP+ W V+D G +ICE+ NPM DPGDG+ A NI+I+ YAG+ W Sbjct 63 MTAFPGNRMPEFPASWHVVDVERGWVICEIQNPMEDPGDGTEHGAANITILHYAGDDLWS 122 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRR 163 +ED YNP+ F A KWC A+ G L +DA W + Sbjct 123 HEEDAYNPMNFFAMAKKWCEHAEAAGNLPKDARVWREK 160 >gi|54025329|ref|YP_119571.1| hypothetical protein nfa33600 [Nocardia farcinica IFM 10152] gi|54016837|dbj|BAD58207.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=168 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 73/159 (46%), Positives = 109/159 (69%), Gaps = 1/159 (0%) Query 3 ASEFSRAELAAAFEKFEKTVARAAATR-DWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAW 61 ++ +SR EL A++K+ TVARAA+ W +V+ +TPD EY E G+++GR + AW Sbjct 2 STTWSREELENAYQKWHSTVARAASGEGSWREFVELFTPDAEYHEQMVGVLKGRDAIWAW 61 Query 62 IQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGN 121 ++ T+ TFPG+ M +FP+ W +ID+ G I+ +L+N M DPGDGS + A NISI+TYAGN Sbjct 62 VEPTLATFPGAAMTSFPAYWHLIDDVNGVIVVKLNNLMRDPGDGSRMGADNISILTYAGN 121 Query 122 GQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARW 160 G + ++EDIY+P F++ +W ++A ELGTL E W Sbjct 122 GMFAKEEDIYDPAEFVKLVPEWIQRAMELGTLSEAELAW 160 >gi|169629016|ref|YP_001702665.1| hypothetical protein MAB_1928c [Mycobacterium abscessus ATCC 19977] gi|169240983|emb|CAM62011.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=167 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 66/160 (42%), Positives = 99/160 (62%), Gaps = 0/160 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F+RAEL AF + + TV R T DW+ + + YT D YIEH G + G++ +R +I Sbjct 4 FTRAELEEAFAQHQATVHRCIETGDWNPYAEMYTEDALYIEHVVGRLHGKEAIRQYITAV 63 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 M FPG+HM + P+ W+V D G ++CE+DN M DPGDG N++++ YAG+G W Sbjct 64 MAEFPGNHMPSLPATWTVFDPEKGWVVCEIDNVMSDPGDGQHWGEPNLTVLHYAGDGLWS 123 Query 126 RQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 +QED YNP ++ +WCR A+ G L ++A W+ ++G Sbjct 124 QQEDAYNPANMVKMVRRWCRAAEAAGNLPDEAREWLAKYG 163 >gi|289568032|ref|ZP_06448259.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289541785|gb|EFD45434.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=70 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 69/70 (99%), Positives = 70/70 (100%), Gaps = 0/70 (0%) Query 1 VSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 +SASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA Sbjct 1 MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRA 60 Query 61 WIQETMTTFP 70 WIQETMTTFP Sbjct 61 WIQETMTTFP 70 >gi|169630047|ref|YP_001703696.1| hypothetical protein MAB_2964 [Mycobacterium abscessus ATCC 19977] gi|169242014|emb|CAM63042.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=166 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/161 (40%), Positives = 92/161 (58%), Gaps = 0/161 (0%) Query 5 EFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQE 64 ++SR EL F+ + V DW + ++ + YIE G GR+ +R + + Sbjct 3 QWSRDELQNMFDHHLRVVDEIGPKGDWAKYADLFSENATYIEPTYGTFEGREAIRTSMVK 62 Query 65 TMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQW 124 TM+ FPG M + S W V+DE G IICEL N M DPGDGS+ ATNISI YAG+ W Sbjct 63 TMSEFPGVEMPHYFSNWHVVDEEHGWIICELVNRMKDPGDGSIWEATNISIFRYAGDNHW 122 Query 125 CRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHG 165 +ED+YNP++F+ A + +++ ELG+L A + + G Sbjct 123 ASEEDVYNPMQFMMAIQGYVQRSSELGSLSPLAETFGKNMG 163 >gi|254483153|ref|ZP_05096386.1| hypothetical protein GPB2148_339 [marine gamma proteobacterium HTCC2148] gi|214036524|gb|EEB77198.1| hypothetical protein GPB2148_339 [marine gamma proteobacterium HTCC2148] Length=158 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/128 (43%), Positives = 74/128 (58%), Gaps = 0/128 (0%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 + R E+ AF+KF+ + A T+DW W +T D Y EH G GRQR+ WI T Sbjct 4 WKRKEIEQAFDKFQAAALKGAQTKDWSDWSNCFTEDATYFEHNYGRYWGRQRIHEWITHT 63 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWC 125 M +P ++M AFP W ID+ G + E+ N M D GDG++ NI+I+ YAGNG + Sbjct 64 MNQWPANNMTAFPVRWYSIDKEKGWVFAEIMNRMEDLGDGNIYEEPNITILHYAGNGLFK 123 Query 126 RQEDIYNP 133 +ED YNP Sbjct 124 YEEDAYNP 131 >gi|118464577|ref|YP_881962.1| hypothetical protein MAV_2774 [Mycobacterium avium 104] gi|118165864|gb|ABK66761.1| conserved hypothetical protein [Mycobacterium avium 104] Length=161 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/132 (38%), Positives = 71/132 (54%), Gaps = 5/132 (3%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F+RAE+ A + + + V +A+ DW + +T DV Y EH G+ RGR+ VR WI Sbjct 7 FTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWIVAV 66 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD--GSVISATNISIITYAGNGQ 123 M FP HM FPS W+ DE ++ + N + P D G N + + YAG+G Sbjct 67 MAPFP--HM-RFPSGWTAYDEDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGL 123 Query 124 WCRQEDIYNPLR 135 + +EDIYNP R Sbjct 124 FSSEEDIYNPNR 135 >gi|254775253|ref|ZP_05216769.1| hypothetical protein MaviaA2_11366 [Mycobacterium avium subsp. avium ATCC 25291] Length=158 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/132 (38%), Positives = 71/132 (54%), Gaps = 5/132 (3%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F+RAE+ A + + + V +A+ DW + +T DV Y EH G+ RGR+ VR WI Sbjct 4 FTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWIVAV 63 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD--GSVISATNISIITYAGNGQ 123 M FP HM FPS W+ DE ++ + N + P D G N + + YAG+G Sbjct 64 MAPFP--HM-RFPSGWTAYDEDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGL 120 Query 124 WCRQEDIYNPLR 135 + +EDIYNP R Sbjct 121 FSSEEDIYNPNR 132 >gi|41407748|ref|NP_960584.1| hypothetical protein MAP1650 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396101|gb|AAS03967.1| hypothetical protein MAP_1650 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457408|gb|EGO36417.1| SnoaL-like polyketide cyclase [Mycobacterium avium subsp. paratuberculosis S397] Length=158 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/132 (38%), Positives = 71/132 (54%), Gaps = 5/132 (3%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F+RAE+ A + + + V +A+ DW + +T DV Y EH G+ RGR+ VR WI Sbjct 4 FTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWIVAV 63 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD--GSVISATNISIITYAGNGQ 123 M FP HM FPS W+ DE ++ + N + P D G N + + YAG+G Sbjct 64 MAPFP--HM-RFPSGWTAYDEDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGL 120 Query 124 WCRQEDIYNPLR 135 + +EDIYNP R Sbjct 121 FSSEEDIYNPNR 132 >gi|342859581|ref|ZP_08716234.1| hypothetical protein MCOL_11898 [Mycobacterium colombiense CECT 3035] gi|342132713|gb|EGT85933.1| hypothetical protein MCOL_11898 [Mycobacterium colombiense CECT 3035] Length=158 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/153 (36%), Positives = 77/153 (51%), Gaps = 6/153 (3%) Query 5 EFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQE 64 +FSRAE+ A + + K V +A+ DW + +T DV Y EH G+ GR+ VR WI Sbjct 3 KFSRAEIDNAVDNYTKVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFHGREAVRDWIVA 62 Query 65 TMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD--GSVISATNISIITYAGNG 122 M FP HM FP+ W DE ++ + N + P D G N + + YAG+G Sbjct 63 VMAPFP--HM-RFPNDWVAHDEDNDAVVVMIKNLLDHPTDPSGEPFWFPNWTRLVYAGDG 119 Query 123 QWCRQEDIYNPLRFLRAAM-KWCRKAQELGTLD 154 + +EDIYNP R + W + +L T D Sbjct 120 LFSSEEDIYNPERDAPGVVAAWMQAGGQLATTD 152 >gi|254820895|ref|ZP_05225896.1| hypothetical protein MintA_13255 [Mycobacterium intracellulare ATCC 13950] Length=158 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/152 (36%), Positives = 76/152 (50%), Gaps = 6/152 (3%) Query 4 SEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQ 63 +F+RAE+ A E + K V +A+ DW + +T DV Y EH G+ GR+ VR WI Sbjct 2 GKFTRAEIDKAVENYTKVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFHGREAVRDWIV 61 Query 64 ETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPG--DGSVISATNISIITYAGN 121 M FP HM FP+ W DE ++ + N + P DG N + + YAGN Sbjct 62 AVMAPFP--HM-RFPNDWIAHDEDNDAVVVMIKNLLDHPTDPDGEPFWFPNWTRLVYAGN 118 Query 122 GQWCRQEDIYNPLRFLRAAM-KWCRKAQELGT 152 G + +EDIYNP R + W + +L T Sbjct 119 GLFSSEEDIYNPDRDAPGVVAAWMQAGGQLAT 150 >gi|296164960|ref|ZP_06847515.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899608|gb|EFG79059.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=161 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/133 (38%), Positives = 71/133 (54%), Gaps = 5/133 (3%) Query 5 EFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQE 64 +F+RAE+ A E + + V +A+ DW + +T DV Y EH G+ GR+ VR WI Sbjct 6 KFTRAEIEQAVENYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFHGREAVRDWIVA 65 Query 65 TMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD--GSVISATNISIITYAGNG 122 M FP HM FPS W+ DE ++ + N + P D G N + + YAG+G Sbjct 66 VMAPFP--HM-RFPSDWTAYDEDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDG 122 Query 123 QWCRQEDIYNPLR 135 + +EDIYNP R Sbjct 123 LFSSEEDIYNPNR 135 >gi|183982854|ref|YP_001851145.1| hypothetical protein MMAR_2850 [Mycobacterium marinum M] gi|183176180|gb|ACC41290.1| conserved hypothetical protein [Mycobacterium marinum M] Length=161 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/132 (38%), Positives = 69/132 (53%), Gaps = 5/132 (3%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F++AE+ A + V +A+ DW + +T DV Y EH G+ GR+ VR WI Sbjct 7 FTKAEIEQAVRHYTTVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFHGREAVREWIVAV 66 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD--GSVISATNISIITYAGNGQ 123 M FP HM FPS W+ DE ++ + N + P D G N + + YAG+G Sbjct 67 MAPFP--HM-RFPSDWTAYDEDNDAVVLMIKNSLDHPTDPNGEPFWFPNWTRLVYAGDGL 123 Query 124 WCRQEDIYNPLR 135 +C +EDIYNP R Sbjct 124 FCSEEDIYNPDR 135 >gi|118618321|ref|YP_906653.1| hypothetical protein MUL_2907 [Mycobacterium ulcerans Agy99] gi|118570431|gb|ABL05182.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=158 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/132 (37%), Positives = 68/132 (52%), Gaps = 5/132 (3%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 F++AE+ A + V +A+ DW +T DV Y EH G+ GR+ VR WI Sbjct 4 FTKAEIEQAVRHYTTVVEGCSASGDWRPCADLFTEDVVYTEHHYGVFHGREAVREWIVAV 63 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD--GSVISATNISIITYAGNGQ 123 M FP HM FPS W+ D+ ++ + N + P D G N + + YAG+G Sbjct 64 MAPFP--HM-RFPSDWTAYDQDNDAVVLMIKNSLDHPTDPNGEPFWFPNWTRLVYAGDGL 120 Query 124 WCRQEDIYNPLR 135 +C +EDIYNP R Sbjct 121 FCSEEDIYNPDR 132 >gi|213649555|ref|ZP_03379608.1| hypothetical protein SentesTy_20962 [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length=35 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 35/35 (100%), Positives = 35/35 (100%), Gaps = 0/35 (0%) Query 37 HYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPG 71 HYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPG Sbjct 1 HYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPG 35 >gi|254820044|ref|ZP_05225045.1| hypothetical protein MintA_08966 [Mycobacterium intracellulare ATCC 13950] Length=196 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/133 (28%), Positives = 60/133 (46%), Gaps = 8/133 (6%) Query 17 KFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPGSHMVA 76 +F + DW W +T D Y +H G G + +++ TM P V Sbjct 13 EFRRYFMTGPVLEDWHAWAHLFTEDATYFDHFYGTFTGPAEITKFLEGTMGAAP---QVY 69 Query 77 FPSLWSVIDES--TGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPL 134 P +W V+D + +++ DNP +PG G+ I + I YAG G+W +ED++ P Sbjct 70 SPLVWYVVDGARVAYKVVNRADNP--EPG-GAPIDFPSYQFIEYAGGGKWRSEEDVWIPA 126 Query 135 RFLRAAMKWCRKA 147 + A ++ A Sbjct 127 EMKQFAKRYATAA 139 >gi|126436753|ref|YP_001072444.1| hypothetical protein Mjls_4181 [Mycobacterium sp. JLS] gi|126236553|gb|ABN99953.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=199 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/143 (27%), Positives = 63/143 (45%), Gaps = 8/143 (5%) Query 9 AELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTT 68 +++A +F + DW W +T D Y +H G G Q + +++ TM Sbjct 8 SDIAEVEREFRRYFMTGPVLEDWAAWANLFTDDATYFDHYYGTFTGPQEITRFLEGTMGA 67 Query 69 FPGSHMVAFPSLWSVIDES--TGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCR 126 P V P +W V+D + +++ DNP PG G I + I Y G+G+W Sbjct 68 AP---QVYSPLVWYVVDGTRVAYKVLNRADNPQ--PG-GRPIDFPSYQFIEYGGDGKWRS 121 Query 127 QEDIYNPLRFLRAAMKWCRKAQE 149 +ED++ R A ++ A E Sbjct 122 EEDVWVLAEMKRFAQRYTDAATE 144 >gi|84495208|ref|ZP_00994327.1| hypothetical protein JNB_10419 [Janibacter sp. HTCC2649] gi|84384701|gb|EAQ00581.1| hypothetical protein JNB_10419 [Janibacter sp. HTCC2649] Length=193 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/130 (31%), Positives = 60/130 (47%), Gaps = 15/130 (11%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 +SRAE+ E+F DW W +T D Y +H G G + +++ T Sbjct 2 YSRAEME---EQFRHYYMVGPVMEDWVGWANLFTEDATYFDHFYGSFTGPDEIAPYLEGT 58 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICE----LDNPMLDPGDGSVISATNISIITYAGN 121 M P + V W ID + R++ E DNP +PG G I + +I YAG+ Sbjct 59 MGGSPCVYTVL---KWYAIDGN--RVVYEALNRADNP--EPG-GPPIDFPSFQVIDYAGD 110 Query 122 GQWCRQEDIY 131 G+W +EDI+ Sbjct 111 GKWSYEEDIW 120 >gi|118464300|ref|YP_881829.1| hypothetical protein MAV_2637 [Mycobacterium avium 104] gi|118165587|gb|ABK66484.1| conserved hypothetical protein [Mycobacterium avium 104] Length=178 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/121 (29%), Positives = 55/121 (46%), Gaps = 8/121 (6%) Query 29 RDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDES- 87 DW W +T D Y +H G G + +++ TM P V P +W ++D + Sbjct 7 EDWHAWAHLFTDDATYFDHFYGTFTGPTEITKFLEGTMGAAP---QVYSPLVWYIVDGTR 63 Query 88 -TGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRK 146 +++ DNP PG G I + I YAG G+W +ED++ P + A ++ Sbjct 64 VAYKVLNRADNPQ--PG-GLPIDFPSYQFIEYAGGGKWRSEEDVWIPAEMKQFAKRYATA 120 Query 147 A 147 A Sbjct 121 A 121 >gi|148554966|ref|YP_001262548.1| hypothetical protein Swit_2051 [Sphingomonas wittichii RW1] gi|148500156|gb|ABQ68410.1| hypothetical protein Swit_2051 [Sphingomonas wittichii RW1] Length=201 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 38/156 (25%), Positives = 65/156 (42%), Gaps = 26/156 (16%) Query 6 FSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQET 65 + E+ AAF+ + A A DWD W +TP Y++H G+ + V +W+ Sbjct 50 YPHDEVEAAFQDY----AARANMDDWDYWADIFTPQCLYVDHHFGVFHSAKEVASWMTPL 105 Query 66 MTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATN------------- 112 M T P + F W V+ G ++ + +GS + Sbjct 106 METQP---EMRFIPEWHVV---MGNLVVNYNWNRWPNPEGSAVDYGEWRNPGPTADYRYQ 159 Query 113 ---ISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCR 145 +++ Y GNG++C +ED+Y+P +L W R Sbjct 160 FPCVTLNIYGGNGKFCYEEDLYSPAAYLEIRDSWRR 195 >gi|111222793|ref|YP_713587.1| hypothetical protein FRAAL3378 [Frankia alni ACN14a] gi|111150325|emb|CAJ62022.1| hypothetical protein FRAAL3378 [Frankia alni ACN14a] Length=202 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 41/128 (33%), Positives = 62/128 (49%), Gaps = 11/128 (8%) Query 7 SRAELAAAFEKFEKTVARAAATRDWDCWVQH-YTPDVEYIEHAAGIMRGRQRVRAWIQET 65 SR E+ AAF+ + DW W +T D Y +H G G+ + ++ T Sbjct 4 SREEVEAAFKNY---YLLGPVAEDWKRWAHECFTEDAWYKDHYWGTFHGQDEIEEYLDVT 60 Query 66 MTTFPGSHMVAFPSLWSVIDEST--GRIICELDNPMLDPGDGSVISATNISIITYAGNGQ 123 M+ PG++ P +W ID T + I DN + PG G + A +I I+ YAGNGQ Sbjct 61 MSWSPGTYT---PMIWYTIDGDTVVWKGINWADNYKV-PG-GPKVGAESIQILEYAGNGQ 115 Query 124 WCRQEDIY 131 + +ED + Sbjct 116 FKSEEDYW 123 >gi|226366567|ref|YP_002784350.1| hypothetical protein ROP_71580 [Rhodococcus opacus B4] gi|226245057|dbj|BAH55405.1| hypothetical protein [Rhodococcus opacus B4] Length=194 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/128 (28%), Positives = 60/128 (47%), Gaps = 11/128 (8%) Query 4 SEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQ 63 + + R E+ AF + + +WD Q +T D Y +H G+ G + +++ Sbjct 2 TRYDRTEVEGAFRHY---FTVGPISENWDAMAQLFTDDGIYRDHFYGMFTGPSEISRYLE 58 Query 64 ETMTTFPGSHMVAFPSLWSVIDES--TGRIICELDNPMLDPGDGSVISATNISIITYAGN 121 TM P V P +W ID+ +++ DNP +PG + ++ ++TYAG Sbjct 59 GTMGAAP---HVYNPLVWYTIDDDRVVYKVVNRADNP--EPG-APALGFDSLQVLTYAGR 112 Query 122 GQWCRQED 129 G+W QED Sbjct 113 GKWSAQED 120 >gi|118463809|ref|YP_881155.1| hypothetical protein MAV_1936 [Mycobacterium avium 104] gi|118165096|gb|ABK65993.1| conserved hypothetical protein [Mycobacterium avium 104] Length=193 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/143 (26%), Positives = 61/143 (43%), Gaps = 8/143 (5%) Query 9 AELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTT 68 A++ +F + DW W +T D Y++H G G + +++ TM Sbjct 2 ADIEEVEREFRRYFMTGPVMEDWHGWAHLFTDDATYLDHFYGTFTGPDEITKFLEGTMGA 61 Query 69 FPGSHMVAFPSLWSVIDES--TGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCR 126 P V P +W +ID + ++ DNP +PG I + I YAG G+W Sbjct 62 AP---YVYSPLVWYIIDGTRVAYKVFNRADNP--EPG-APPIDFPSYQFIEYAGGGKWRS 115 Query 127 QEDIYNPLRFLRAAMKWCRKAQE 149 +ED++ + A ++ A E Sbjct 116 EEDVWVMAEMKQFARRYAAAASE 138 Lambda K H 0.322 0.133 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127548590676 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40