BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0140 Length=126 Score E Sequences producing significant alignments: (Bits) Value gi|15607282|ref|NP_214654.1| hypothetical protein Rv0140 [Mycoba... 258 2e-67 gi|340625175|ref|YP_004743627.1| hypothetical protein MCAN_01431... 251 3e-65 gi|254822366|ref|ZP_05227367.1| hypothetical protein MintA_20706... 198 3e-49 gi|118619827|ref|YP_908159.1| hypothetical protein MUL_4770 [Myc... 196 1e-48 gi|296167331|ref|ZP_06849733.1| protein of hypothetical function... 195 2e-48 gi|342859427|ref|ZP_08716081.1| hypothetical protein MCOL_11123 ... 195 2e-48 gi|240168144|ref|ZP_04746803.1| hypothetical protein MkanA1_0243... 189 2e-46 gi|41409655|ref|NP_962491.1| hypothetical protein MAP3557 [Mycob... 177 6e-43 gi|118462390|ref|YP_884273.1| hypothetical protein MAV_5156 [Myc... 174 4e-42 gi|333988729|ref|YP_004521343.1| hypothetical protein JDM601_008... 160 7e-38 gi|118471107|ref|YP_890682.1| hypothetical protein MSMEG_6469 [M... 159 1e-37 gi|108802047|ref|YP_642244.1| hypothetical protein Mmcs_5084 [My... 156 8e-37 gi|126438025|ref|YP_001073716.1| hypothetical protein Mjls_5462 ... 156 9e-37 gi|120406644|ref|YP_956473.1| hypothetical protein Mvan_5702 [My... 156 9e-37 gi|145221702|ref|YP_001132380.1| hypothetical protein Mflv_1110 ... 142 1e-32 gi|315446560|ref|YP_004079439.1| hypothetical protein Mspyr1_507... 142 1e-32 gi|119717943|ref|YP_924908.1| hypothetical protein Noca_3721 [No... 133 7e-30 gi|331699571|ref|YP_004335810.1| hypothetical protein Psed_5833 ... 133 7e-30 gi|300783540|ref|YP_003763831.1| hypothetical protein AMED_1617 ... 130 5e-29 gi|27380827|ref|NP_772356.1| hypothetical protein blr5716 [Brady... 128 3e-28 gi|167647959|ref|YP_001685622.1| hypothetical protein Caul_3999 ... 128 3e-28 gi|148256693|ref|YP_001241278.1| hypothetical protein BBta_5398 ... 127 4e-28 gi|338738494|ref|YP_004675456.1| hypothetical protein HYPMC_1654... 127 6e-28 gi|334320668|ref|YP_004557297.1| hypothetical protein Sinme_4754... 127 7e-28 gi|146339787|ref|YP_001204835.1| hypothetical protein BRADO2788 ... 127 7e-28 gi|339323675|ref|YP_004682569.1| hypothetical protein CNE_2c2390... 126 1e-27 gi|169631686|ref|YP_001705335.1| hypothetical protein MAB_4612 [... 126 1e-27 gi|78062917|ref|YP_372825.1| hypothetical protein Bcep18194_B206... 125 2e-27 gi|116696427|ref|YP_842003.1| hypothetical protein H16_B2491 [Ra... 125 2e-27 gi|338975223|ref|ZP_08630578.1| hypothetical protein CSIRO_3688 ... 125 3e-27 gi|94313277|ref|YP_586486.1| hypothetical protein Rmet_4352 [Cup... 124 5e-27 gi|299131725|ref|ZP_07024920.1| protein of unknown function DUF4... 124 5e-27 gi|336037544|gb|AEH83474.1| Conserved hypothetical protein [Sino... 124 5e-27 gi|221212585|ref|ZP_03585562.1| conserved hypothetical protein [... 123 8e-27 gi|333815355|gb|AEG08022.1| protein of unknown function DUF427 [... 123 9e-27 gi|187924811|ref|YP_001896453.1| hypothetical protein Bphyt_2835... 123 9e-27 gi|16264705|ref|NP_437497.1| hypothetical protein SM_b21379 [Sin... 122 1e-26 gi|221196822|ref|ZP_03569869.1| conserved hypothetical protein [... 122 1e-26 gi|111220023|ref|YP_710817.1| hypothetical protein FRAAL0533 [Fr... 122 2e-26 gi|134293298|ref|YP_001117034.1| hypothetical protein Bcep1808_4... 122 2e-26 gi|330821389|ref|YP_004350251.1| hypothetical protein bgla_2g230... 122 2e-26 gi|296158171|ref|ZP_06841003.1| protein of unknown function DUF4... 122 2e-26 gi|115523633|ref|YP_780544.1| hypothetical protein RPE_1615 [Rho... 121 3e-26 gi|115358165|ref|YP_775303.1| hypothetical protein Bamb_3415 [Bu... 121 3e-26 gi|91784499|ref|YP_559705.1| hypothetical protein Bxe_A1300 [Bur... 121 3e-26 gi|167565412|ref|ZP_02358328.1| hypothetical protein BoklE_22854... 120 5e-26 gi|222087665|ref|YP_002546202.1| hypothetical protein Arad_4589 ... 120 5e-26 gi|254253787|ref|ZP_04947104.1| hypothetical protein BDAG_03065 ... 120 6e-26 gi|172062953|ref|YP_001810604.1| hypothetical protein BamMC406_3... 120 7e-26 gi|171317750|ref|ZP_02906932.1| protein of unknown function DUF4... 120 7e-26 >gi|15607282|ref|NP_214654.1| hypothetical protein Rv0140 [Mycobacterium tuberculosis H37Rv] gi|15839521|ref|NP_334558.1| hypothetical protein MT0148 [Mycobacterium tuberculosis CDC1551] gi|31791318|ref|NP_853811.1| hypothetical protein Mb0145 [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=126 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ Sbjct 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE Sbjct 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 Query 121 ISIFPG 126 ISIFPG Sbjct 121 ISIFPG 126 >gi|340625175|ref|YP_004743627.1| hypothetical protein MCAN_01431 [Mycobacterium canettii CIPT 140010059] gi|340003365|emb|CCC42484.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=126 Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 123/126 (98%), Positives = 125/126 (99%), Gaps = 0/126 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAAL LQEASYPAVQYIPLADVVQ Sbjct 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALRLQEASYPAVQYIPLADVVQ 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRLIRT+TSTYCPFKGEASYYSVTTDAGDIVDDVMWTYE+PYPAVAAIAGHVACYPDKAE Sbjct 61 DRLIRTDTSTYCPFKGEASYYSVTTDAGDIVDDVMWTYESPYPAVAAIAGHVACYPDKAE 120 Query 121 ISIFPG 126 ISIFPG Sbjct 121 ISIFPG 126 >gi|254822366|ref|ZP_05227367.1| hypothetical protein MintA_20706 [Mycobacterium intracellulare ATCC 13950] Length=126 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 95/123 (78%), Positives = 111/123 (91%), Gaps = 0/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++R VLEP+A HPITIEPT+ RVQVRVNGE+VADT AAL L+EA+ PAVQYIP+ADV Q Sbjct 1 MAHRQVLEPNAGHPITIEPTHGRVQVRVNGELVADTTAALELREATIPAVQYIPIADVQQ 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRL RT+TSTYCPFKG+ASYYSVTT +GD VDDV+WTYE PYPAVAAIAGHVA YP+KA+ Sbjct 61 DRLTRTDTSTYCPFKGDASYYSVTTSSGDTVDDVIWTYEQPYPAVAAIAGHVAFYPNKAD 120 Query 121 ISI 123 I++ Sbjct 121 ITV 123 >gi|118619827|ref|YP_908159.1| hypothetical protein MUL_4770 [Mycobacterium ulcerans Agy99] gi|183980381|ref|YP_001848672.1| hypothetical protein MMAR_0350 [Mycobacterium marinum M] gi|118571937|gb|ABL06688.1| conserved protein [Mycobacterium ulcerans Agy99] gi|183173707|gb|ACC38817.1| conserved protein [Mycobacterium marinum M] Length=126 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 96/125 (77%), Positives = 107/125 (86%), Gaps = 0/125 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS+R VLEPSA HPITIEPT RVQVRVNGE++ADTAAAL L+EA+ PAVQYIP ADVV Sbjct 1 MSHRKVLEPSAGHPITIEPTKGRVQVRVNGELIADTAAALELREATLPAVQYIPRADVVA 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRL T+TS+YCPFKG+ASYYSVTT GD V DV+WTYE PYPAVA IAGHVA YP+KAE Sbjct 61 DRLTSTDTSSYCPFKGDASYYSVTTSTGDTVADVIWTYEQPYPAVAEIAGHVAFYPNKAE 120 Query 121 ISIFP 125 IS+ P Sbjct 121 ISVIP 125 >gi|296167331|ref|ZP_06849733.1| protein of hypothetical function DUF427 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897275|gb|EFG76879.1| protein of hypothetical function DUF427 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=126 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 93/123 (76%), Positives = 107/123 (87%), Gaps = 0/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS+ + EPSA HPITIEPT RVQVRVNGE++ADT AAL L+EA+ PAVQYIP+ DV Q Sbjct 1 MSHPEIKEPSAGHPITIEPTKGRVQVRVNGELIADTTAALELREATLPAVQYIPMGDVAQ 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRL RT+TS+YCPFKGEASYYSVT+ AGD VDDV+WTYE PYPAVAAIAGHVA YP+KA+ Sbjct 61 DRLTRTDTSSYCPFKGEASYYSVTSSAGDTVDDVIWTYEQPYPAVAAIAGHVAFYPNKAD 120 Query 121 ISI 123 IS+ Sbjct 121 ISV 123 >gi|342859427|ref|ZP_08716081.1| hypothetical protein MCOL_11123 [Mycobacterium colombiense CECT 3035] gi|342133668|gb|EGT86871.1| hypothetical protein MCOL_11123 [Mycobacterium colombiense CECT 3035] Length=126 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 94/123 (77%), Positives = 106/123 (87%), Gaps = 0/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++ + EPSA HPITIEPT RVQVRVNGE+VADT AAL L+EA+ PAVQYIP+ADV+Q Sbjct 1 MAHPEIKEPSAGHPITIEPTKGRVQVRVNGELVADTTAALGLREATLPAVQYIPIADVIQ 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRL RT+TSTYCPFKG ASYYSVTT AGD VDDV+WTYE PYPAV IAGHVA YPDKA+ Sbjct 61 DRLTRTDTSTYCPFKGNASYYSVTTSAGDTVDDVIWTYEQPYPAVEKIAGHVAFYPDKAD 120 Query 121 ISI 123 IS+ Sbjct 121 ISV 123 >gi|240168144|ref|ZP_04746803.1| hypothetical protein MkanA1_02437 [Mycobacterium kansasii ATCC 12478] Length=126 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 89/125 (72%), Positives = 107/125 (86%), Gaps = 0/125 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS+R VLEP+A HPITIEP R++VR++GE+VADT AAL L+EA+ PAVQYIPLADV + Sbjct 1 MSHRKVLEPNAGHPITIEPATGRIRVRIHGELVADTTAALELREATLPAVQYIPLADVAR 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRL R++T +YCPFKGEA YYSVTT AGD V+D +WTYE PYPAVAAIAGHVA YPDKA+ Sbjct 61 DRLTRSDTRSYCPFKGEAGYYSVTTLAGDTVEDAIWTYEQPYPAVAAIAGHVAFYPDKAD 120 Query 121 ISIFP 125 +S+ P Sbjct 121 VSVEP 125 >gi|41409655|ref|NP_962491.1| hypothetical protein MAP3557 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398487|gb|AAS06107.1| hypothetical protein MAP_3557 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459906|gb|EGO38818.1| hypothetical protein MAPs_45490 [Mycobacterium avium subsp. paratuberculosis S397] Length=126 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 95/123 (78%), Positives = 106/123 (87%), Gaps = 0/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++ + EPSA HPITIEPT RVQVRVNGE++AD++AAL L+EA+ PAVQYIP DV Q Sbjct 1 MAHPEIKEPSAGHPITIEPTRGRVQVRVNGELIADSSAALELREATLPAVQYIPFTDVAQ 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRL RT+TSTYCPFKGEASYYSVTT AGD VDDV+WTYE PYPAVAAIAGH A YPDKAE Sbjct 61 DRLTRTDTSTYCPFKGEASYYSVTTSAGDTVDDVIWTYEQPYPAVAAIAGHAAFYPDKAE 120 Query 121 ISI 123 ISI Sbjct 121 ISI 123 >gi|118462390|ref|YP_884273.1| hypothetical protein MAV_5156 [Mycobacterium avium 104] gi|254777498|ref|ZP_05219014.1| hypothetical protein MaviaA2_22906 [Mycobacterium avium subsp. avium ATCC 25291] gi|118163677|gb|ABK64574.1| conserved hypothetical protein [Mycobacterium avium 104] Length=126 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 94/123 (77%), Positives = 104/123 (85%), Gaps = 0/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++ + EPSA HPITIEPT RVQVRVNGE++AD+ AAL L+EA+ PAVQYIP DV Q Sbjct 1 MAHPEIKEPSAGHPITIEPTRGRVQVRVNGELIADSTAALELREATLPAVQYIPFTDVAQ 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 DRL RT+T TYCPFKGEASYYSVTT AGD VDDV+WTYE PYPAVAAIAGH A YPDKAE Sbjct 61 DRLTRTDTRTYCPFKGEASYYSVTTSAGDTVDDVIWTYEQPYPAVAAIAGHAAFYPDKAE 120 Query 121 ISI 123 ISI Sbjct 121 ISI 123 >gi|333988729|ref|YP_004521343.1| hypothetical protein JDM601_0089 [Mycobacterium sp. JDM601] gi|333484697|gb|AEF34089.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=131 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 79/122 (65%), Positives = 96/122 (79%), Gaps = 0/122 (0%) Query 2 SNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQD 61 +R V P+A++PIT+ PT R V VRV GEVVA+T AL LQEA PAVQYIP+ DV + Sbjct 7 GSRPVHIPTAEYPITVTPTGRHVTVRVGGEVVAETDHALTLQEADRPAVQYIPMDDVNGE 66 Query 62 RLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEI 121 L RT TS+YCPFKG+A+YY+VTT AG V DV+WTYE P+PAVAAIAGH+A YPDKA+I Sbjct 67 LLSRTTTSSYCPFKGDAAYYTVTTAAGQTVADVIWTYEQPFPAVAAIAGHIAFYPDKADI 126 Query 122 SI 123 S+ Sbjct 127 SV 128 >gi|118471107|ref|YP_890682.1| hypothetical protein MSMEG_6469 [Mycobacterium smegmatis str. MC2 155] gi|118172394|gb|ABK73290.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=141 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/126 (63%), Positives = 98/126 (78%), Gaps = 3/126 (2%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++R VLEP+A+HPIT+ PT R V VRVNG V+A+T AL L+EASYP VQYIPLADV Sbjct 15 MTSRPVLEPTAEHPITVTPTGRHVTVRVNGTVIAETDDALTLKEASYPPVQYIPLADVDG 74 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGD---IVDDVMWTYENPYPAVAAIAGHVACYPD 117 L R++T+TYCP+KGEA+YYS+ +G +DD +WTYE PYPAVA IAG VA YPD Sbjct 75 SVLRRSDTTTYCPYKGEANYYSLEFGSGSEGAALDDAIWTYEQPYPAVADIAGRVAFYPD 134 Query 118 KAEISI 123 KAEI++ Sbjct 135 KAEITV 140 >gi|108802047|ref|YP_642244.1| hypothetical protein Mmcs_5084 [Mycobacterium sp. MCS] gi|119871199|ref|YP_941151.1| hypothetical protein Mkms_5172 [Mycobacterium sp. KMS] gi|108772466|gb|ABG11188.1| protein of unknown function DUF427 [Mycobacterium sp. MCS] gi|119697288|gb|ABL94361.1| protein of unknown function DUF427 [Mycobacterium sp. KMS] Length=123 Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 76/123 (62%), Positives = 95/123 (78%), Gaps = 1/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS R VLEP+A HPIT+ PT R V V VNG V+A+T AL LQEA YPAVQYIPL DV Sbjct 1 MSGRPVLEPTAAHPITVSPTGRHVTVTVNGTVIAETDEALTLQEADYPAVQYIPLHDVND 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L+ ++T++YCP+KG+A+YY V AG+ V+DV+WTY PYPAV AIAGHVA YPDKA+ Sbjct 61 SALVCSDTTSYCPYKGDAAYYHVNA-AGETVEDVIWTYGQPYPAVGAIAGHVAFYPDKAD 119 Query 121 ISI 123 +++ Sbjct 120 VTV 122 >gi|126438025|ref|YP_001073716.1| hypothetical protein Mjls_5462 [Mycobacterium sp. JLS] gi|126237825|gb|ABO01226.1| protein of unknown function DUF427 [Mycobacterium sp. JLS] Length=123 Score = 156 bits (395), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 76/123 (62%), Positives = 95/123 (78%), Gaps = 1/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS R VLEP+A HPIT+ PT R V V VNGEV+A+T AL LQEA YPAVQYIPL DV Sbjct 1 MSGRPVLEPTAAHPITVSPTGRHVTVTVNGEVIAETDQALTLQEADYPAVQYIPLRDVND 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L+ ++T++YCP+KG+A+YY V AG+ V+DV+WTY PYPAV AIAGHVA YPD A+ Sbjct 61 SALVCSDTTSYCPYKGDAAYYHVNA-AGETVEDVIWTYGQPYPAVGAIAGHVAFYPDTAD 119 Query 121 ISI 123 +++ Sbjct 120 VTV 122 >gi|120406644|ref|YP_956473.1| hypothetical protein Mvan_5702 [Mycobacterium vanbaalenii PYR-1] gi|119959462|gb|ABM16467.1| protein of unknown function DUF427 [Mycobacterium vanbaalenii PYR-1] Length=124 Score = 156 bits (395), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 96/125 (77%), Gaps = 1/125 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++R VLEPS HPIT+ PT R V VRVNGE +A+T +AL LQE+SYPAVQYIP+ADVV Sbjct 1 MTDRPVLEPSPAHPITVVPTGRHVVVRVNGETIAETDSALTLQESSYPAVQYIPMADVVT 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 +RL ++T+TYCP+KG+A Y+ V G V D +WTY P+PAVA IAGHVA Y DKA+ Sbjct 61 ERLRPSDTATYCPYKGQAGYFDVVA-GGQTVADAIWTYREPHPAVAQIAGHVAFYADKAD 119 Query 121 ISIFP 125 +++ P Sbjct 120 VTVHP 124 >gi|145221702|ref|YP_001132380.1| hypothetical protein Mflv_1110 [Mycobacterium gilvum PYR-GCK] gi|145214188|gb|ABP43592.1| protein of unknown function DUF427 [Mycobacterium gilvum PYR-GCK] Length=129 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/123 (64%), Positives = 95/123 (78%), Gaps = 1/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++R + EPS HPIT+ PT R V VRVNG+VVA+T AAL LQEASYPAVQYIP+ DV+ Sbjct 5 MTDRPIHEPSPSHPITVVPTGRHVVVRVNGDVVAETDAALTLQEASYPAVQYIPIGDVLP 64 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 RL ++T+TYCPFKG+A Y+ VT G V D +WTY PYPAVA IAGHVA YPDKA+ Sbjct 65 GRLSPSDTATYCPFKGDAGYFDVTA-GGSTVTDAVWTYREPYPAVAQIAGHVAFYPDKAD 123 Query 121 ISI 123 +S+ Sbjct 124 VSV 126 >gi|315446560|ref|YP_004079439.1| hypothetical protein Mspyr1_50770 [Mycobacterium sp. Spyr1] gi|315264863|gb|ADU01605.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=125 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/123 (64%), Positives = 95/123 (78%), Gaps = 1/123 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M++R + EPS HPIT+ PT R V VRVNG+VVA+T AAL LQEASYPAVQYIP+ DV+ Sbjct 1 MTDRPIHEPSPSHPITVVPTGRHVVVRVNGDVVAETDAALTLQEASYPAVQYIPIGDVLP 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 RL ++T+TYCPFKG+A Y+ VT G V D +WTY PYPAVA IAGHVA YPDKA+ Sbjct 61 GRLSPSDTATYCPFKGDAGYFDVTA-GGSTVTDAVWTYREPYPAVAQIAGHVAFYPDKAD 119 Query 121 ISI 123 +S+ Sbjct 120 VSV 122 >gi|119717943|ref|YP_924908.1| hypothetical protein Noca_3721 [Nocardioides sp. JS614] gi|119538604|gb|ABL83221.1| protein of unknown function DUF427 [Nocardioides sp. JS614] Length=126 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 69/125 (56%), Positives = 84/125 (68%), Gaps = 1/125 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS + VL P HPITI PT RV V + VADT +AL LQEASYP VQY+PLADV Sbjct 1 MSEKQVLVPDEGHPITITPTTGRVVVTLGERTVADTTSALTLQEASYPPVQYVPLADVDP 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+A YYS+ D G D+ +W YE PY AVA IAGHVA YP+ + Sbjct 61 AVLRRTDHATYCPYKGDAGYYSLVAD-GATHDNAVWVYEQPYDAVAGIAGHVAFYPNVVD 119 Query 121 ISIFP 125 + +P Sbjct 120 VRTYP 124 >gi|331699571|ref|YP_004335810.1| hypothetical protein Psed_5833 [Pseudonocardia dioxanivorans CB1190] gi|326954260|gb|AEA27957.1| protein of unknown function DUF427 [Pseudonocardia dioxanivorans CB1190] Length=135 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 69/119 (58%), Positives = 81/119 (69%), Gaps = 1/119 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 R V P DHPITI P +RRV VR G VVA T AL LQEA YP V Y+PLADV Sbjct 2 TRTVKIPGPDHPITIAPADRRVVVRAGGHVVASTTRALALQEADYPVVYYVPLADVDPAV 61 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEI 121 L ++T+TYCP+KG+ASY+ V+T AG V D WTY PY +VA IAGH+A YPD+ EI Sbjct 62 LADSDTTTYCPYKGDASYHDVSTAAG-TVSDAAWTYREPYESVAPIAGHLAFYPDRVEI 119 >gi|300783540|ref|YP_003763831.1| hypothetical protein AMED_1617 [Amycolatopsis mediterranei U32] gi|299793054|gb|ADJ43429.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340524927|gb|AEK40132.1| hypothetical protein RAM_08210 [Amycolatopsis mediterranei S699] Length=125 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 66/115 (58%), Positives = 83/115 (73%), Gaps = 3/115 (2%) Query 4 RIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRL 63 + VL+P DHPIT+EPT RV V+ G V+AD+ AL LQE++YPAVQYIPLADV L Sbjct 3 KQVLQPGPDHPITVEPTKARVVVKAGGRVIADSRNALTLQESTYPAVQYIPLADVDSGVL 62 Query 64 IRTETSTYCPFKGEASYYSVTTDAGDIV-DDVMWTYENPYPAVAAIAGHVACYPD 117 RT+ TYCP+KGEA YYS++ GD+ ++ +WTYE PY AVA I HVA YP+ Sbjct 63 ERTDHETYCPYKGEAGYYSLSV--GDVKGENSVWTYEKPYDAVAPIKDHVAFYPN 115 >gi|27380827|ref|NP_772356.1| hypothetical protein blr5716 [Bradyrhizobium japonicum USDA 110] gi|27353992|dbj|BAC50981.1| blr5716 [Bradyrhizobium japonicum USDA 110] Length=119 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/113 (54%), Positives = 80/113 (71%), Gaps = 1/113 (0%) Query 9 PSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTET 68 P DHPITI P +RV+V V+A+T+ AL L+EA YPAVQY+P D L RT+ Sbjct 4 PGPDHPITITPNPKRVRVTAGDIVIAETSKALTLKEAKYPAVQYVPRQDANMTLLERTDR 63 Query 69 STYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEI 121 T+CP+KG+ASYYS+ D G +D+ +WTYE P+PA+A I+GH+A YPDK +I Sbjct 64 VTHCPYKGDASYYSIKAD-GKTLDNAIWTYETPFPAMAEISGHLAFYPDKVKI 115 >gi|167647959|ref|YP_001685622.1| hypothetical protein Caul_3999 [Caulobacter sp. K31] gi|167350389|gb|ABZ73124.1| protein of unknown function DUF427 [Caulobacter sp. K31] Length=125 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/120 (53%), Positives = 85/120 (71%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M+ R + P +DHPITI P +RV V + G+ +ADT AL L+EASYPAVQYIP DV Sbjct 1 MTERPIKIPGSDHPITITPNPKRVIVTLGGKTIADTRDALTLKEASYPAVQYIPRKDVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KGEASY+S+ + G+ + +WTYE+ YP+VAAI H+A YPD+ + Sbjct 61 ALLARTDHATYCPYKGEASYFSIPS-GGERSVNAIWTYESAYPSVAAIQDHLAFYPDRVD 119 >gi|148256693|ref|YP_001241278.1| hypothetical protein BBta_5398 [Bradyrhizobium sp. BTAi1] gi|146408866|gb|ABQ37372.1| hypothetical protein BBta_5398 [Bradyrhizobium sp. BTAi1] Length=120 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 60/113 (54%), Positives = 79/113 (70%), Gaps = 1/113 (0%) Query 9 PSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTET 68 P DHPITI P +RV+V G V+ADT AL L+EASYPAVQY+P AD L +T Sbjct 4 PGPDHPITITPNPKRVRVLAGGAVIADTTRALTLKEASYPAVQYVPRADANMAALQKTAR 63 Query 69 STYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEI 121 T+CP+KG+ASY+S+ + G +D+ +W+YE P+PA+ IAGH+A YPDK I Sbjct 64 VTHCPYKGDASYFSIAAN-GTTLDNAIWSYEAPFPAMTEIAGHLAFYPDKVRI 115 >gi|338738494|ref|YP_004675456.1| hypothetical protein HYPMC_1654 [Hyphomicrobium sp. MC1] gi|337759057|emb|CCB64884.1| conserved protein of unknown function [Hyphomicrobium sp. MC1] Length=130 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/120 (54%), Positives = 83/120 (70%), Gaps = 1/120 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 +R L P + HPIT+E RRV VR G+VVADT A+ L EASYPAVQYIP DV Sbjct 8 DRARLIPDSKHPITLEKNPRRVLVRFAGKVVADTTNAIVLTEASYPAVQYIPRTDVDMQF 67 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEIS 122 L R+ ++YCP+KG+ASY+S++ G ++ +W+YE PY AV+AI HVA YPD+ EIS Sbjct 68 LQRSAHTSYCPYKGDASYFSLSAPGGS-SENAVWSYEAPYEAVSAIQDHVAFYPDRVEIS 126 >gi|334320668|ref|YP_004557297.1| hypothetical protein Sinme_4754 [Sinorhizobium meliloti AK83] gi|334098407|gb|AEG56417.1| protein of unknown function DUF427 [Sinorhizobium meliloti AK83] Length=124 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 61/120 (51%), Positives = 83/120 (70%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS++ + P DHPIT+E RRV ++++G +VADT AL L+EASYP VQYIP +DV Sbjct 1 MSDKPIRIPGPDHPITVERNPRRVVIKLDGRIVADTRDALTLREASYPPVQYIPRSDVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ TYCP+KG+ASYYS+ G+ + +WTYENP+ AV I H+A YPD+ + Sbjct 61 SLLARTDHGTYCPYKGDASYYSIAP-GGERSKNAVWTYENPHDAVREIKDHMAFYPDRVD 119 >gi|146339787|ref|YP_001204835.1| hypothetical protein BRADO2788 [Bradyrhizobium sp. ORS 278] gi|146192593|emb|CAL76598.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length=120 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 60/113 (54%), Positives = 80/113 (71%), Gaps = 1/113 (0%) Query 9 PSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTET 68 P DHPITI P +RV+V +G V+A+T AL L+EASYPAVQY+P AD L +T+ Sbjct 4 PGPDHPITITPNPKRVRVVADGVVIAETTRALTLKEASYPAVQYVPRADANMAALKKTDR 63 Query 69 STYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEI 121 T+CP+KG+ASY+SV T G +D+ +W+YE P+PA+ I GH+A YPDK I Sbjct 64 VTHCPYKGDASYFSVVT-PGKTLDNAIWSYETPFPAMTEITGHLAFYPDKVRI 115 >gi|339323675|ref|YP_004682569.1| hypothetical protein CNE_2c23900 [Cupriavidus necator N-1] gi|338170283|gb|AEI81337.1| hypothetical protein CNE_2c23900 [Cupriavidus necator N-1] Length=126 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/120 (54%), Positives = 83/120 (70%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M+++ V P DHPITI PT RV VRV G +AD+ AAL LQEA+YP VQYIP V Sbjct 1 MTDKPVRIPGPDHPITITPTAGRVVVRVAGIAIADSDAALTLQEATYPPVQYIPREHVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 +L RT +TYCP+KG+ SY+S+ G+ + +W+YE PYPAVAAIA H+A YPD+ + Sbjct 61 TQLERTAHTTYCPYKGDCSYFSIPA-GGERARNAVWSYETPYPAVAAIASHLAFYPDRVD 119 >gi|169631686|ref|YP_001705335.1| hypothetical protein MAB_4612 [Mycobacterium abscessus ATCC 19977] gi|169243653|emb|CAM64681.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=125 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/122 (55%), Positives = 82/122 (68%), Gaps = 1/122 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 + +R L P DHPI I P+N RV V + VAD+ AL LQEASYPAV Y+P V Sbjct 3 IPDRPHLVPGPDHPIGISPSNTRVVVTAGDDTVADSTRALRLQEASYPAVHYLPPDSVNW 62 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 D L RT+T TYCP+KGEASYYSV T G V+D WTYE+P+P VA IA ++A YPD+ Sbjct 63 DVLQRTDTHTYCPYKGEASYYSVRTPEG-TVEDAAWTYEDPFPEVAPIARYLAFYPDRVT 121 Query 121 IS 122 ++ Sbjct 122 VT 123 >gi|78062917|ref|YP_372825.1| hypothetical protein Bcep18194_B2068 [Burkholderia sp. 383] gi|77970802|gb|ABB12181.1| protein of unknown function DUF427 [Burkholderia sp. 383] Length=135 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/119 (55%), Positives = 80/119 (68%), Gaps = 1/119 (0%) Query 2 SNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQD 61 S R V P DHPIT+EP RRV V+ G VVADT AL L+EA+YPAV YIP D Sbjct 8 SARPVKTPGPDHPITVEPHPRRVVVKAAGRVVADTRRALALREAAYPAVLYIPREDADLT 67 Query 62 RLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT +TYCP+KG+A+YYS+ G+ + +WTYE PYPAV AI GH+A YPD+ + Sbjct 68 LLQRTNHATYCPYKGDAAYYSIPA-GGERAVNAVWTYEAPYPAVDAIRGHLAFYPDRVD 125 >gi|116696427|ref|YP_842003.1| hypothetical protein H16_B2491 [Ralstonia eutropha H16] gi|113530926|emb|CAJ97273.1| Hypothetical protein H16_B2491 [Ralstonia eutropha H16] Length=126 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/120 (54%), Positives = 83/120 (70%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M+++ V P DHPITI PT RV VRV G +AD+ AAL LQEA+YP VQYIP V Sbjct 1 MTDKPVRIPGPDHPITITPTAGRVVVRVAGIAIADSDAALTLQEATYPPVQYIPREHVDL 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 +L RT +TYCP+KG+ SY+S+ G+ + +W+YE PYPAVAAIA H+A YPD+ + Sbjct 61 AQLERTAHTTYCPYKGDCSYFSIPA-GGERARNAVWSYETPYPAVAAIASHLAFYPDRVD 119 >gi|338975223|ref|ZP_08630578.1| hypothetical protein CSIRO_3688 [Bradyrhizobiaceae bacterium SG-6C] gi|338231822|gb|EGP06957.1| hypothetical protein CSIRO_3688 [Bradyrhizobiaceae bacterium SG-6C] Length=122 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 60/113 (54%), Positives = 80/113 (71%), Gaps = 1/113 (0%) Query 9 PSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTET 68 P DHPITI P +RV+V V+GEV+A+T+ AL L+EA+Y VQYIP D L RT+ Sbjct 8 PGPDHPITIAPNPKRVRVSVDGEVIAETSHALTLREANYRPVQYIPREDANPALLKRTDH 67 Query 69 STYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEI 121 STYCP+KG+A Y+S+ + G +++ +WTYE PY +V IAGH+A YPDK I Sbjct 68 STYCPYKGDAGYFSIVS-GGRTLENAIWTYETPYESVKEIAGHLAFYPDKVMI 119 >gi|94313277|ref|YP_586486.1| hypothetical protein Rmet_4352 [Cupriavidus metallidurans CH34] gi|93357129|gb|ABF11217.1| conserved hypothetical protein (family DUF427) [Cupriavidus metallidurans CH34] Length=125 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/126 (53%), Positives = 85/126 (68%), Gaps = 2/126 (1%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M ++ V P DHPITI RV V V G+V+ADT AL LQEA+YPAVQY+P DV Sbjct 1 MPDKPVKIPGPDHPITITRQGDRVVVTVAGKVIADTRNALTLQEAAYPAVQYVPREDVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT +YCP+KG+A+YYS+ G ++ +WTYE PYPAV+AIAG++A YPD+ + Sbjct 61 SELSRTSHGSYCPYKGDATYYSIPA-GGARAENAVWTYECPYPAVSAIAGYLAFYPDRVD 119 Query 121 -ISIFP 125 I I P Sbjct 120 SIGITP 125 >gi|299131725|ref|ZP_07024920.1| protein of unknown function DUF427 [Afipia sp. 1NLS2] gi|298591862|gb|EFI52062.1| protein of unknown function DUF427 [Afipia sp. 1NLS2] Length=120 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/117 (52%), Positives = 79/117 (68%), Gaps = 1/117 (0%) Query 9 PSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTET 68 P DHPITI RRV++ G+V+A+TA AL LQEASYPAVQYIP AD L T Sbjct 4 PGPDHPITIALNPRRVRITAGGKVIAETARALVLQEASYPAVQYIPRADADMTLLSATHH 63 Query 69 STYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEISIFP 125 T+CP+KG+A Y+++ G+ +D+ +WTYE P+ AV AIA H+A YPD+ +I P Sbjct 64 HTHCPYKGDAGYFTIHA-GGETLDNAVWTYETPHDAVKAIASHLAFYPDRVKIEELP 119 >gi|336037544|gb|AEH83474.1| Conserved hypothetical protein [Sinorhizobium meliloti SM11] Length=124 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/120 (52%), Positives = 81/120 (68%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS++ + P DHPIT+E RV V+++G VVADT AL L+EASYP VQYIP DV Sbjct 1 MSDKPIRIPGPDHPITVERNPGRVVVKLDGRVVADTRDALTLREASYPPVQYIPRNDVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ TYCP+KG+ASYYS+ G+ + +WTYENP+ AV I H+A YPD+ + Sbjct 61 SLLARTDHGTYCPYKGDASYYSIAA-GGERSKNAVWTYENPHDAVREIKDHMAFYPDRVD 119 >gi|221212585|ref|ZP_03585562.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gi|221167684|gb|EEE00154.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length=135 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/120 (54%), Positives = 80/120 (67%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 + +R V P DHPIT+ P RV V V G VADT AL L+EASYPAV YIP DV Sbjct 7 LQSRPVKTPGPDHPITVSPHPSRVVVTVAGRTVADTQRALALREASYPAVLYIPREDVDM 66 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ + V+ V WTYE+PYPAV AI GH+A YPD+ + Sbjct 67 ALLQRTDHATYCPYKGDCAYYSIPSGGARAVNAV-WTYEHPYPAVEAIRGHLAFYPDRVD 125 >gi|333815355|gb|AEG08022.1| protein of unknown function DUF427 [Sinorhizobium meliloti BL225C] Length=124 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 62/120 (52%), Positives = 80/120 (67%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS + + P DHPIT+E RV V+++G VVADT AL L+EASYP VQYIP DV Sbjct 1 MSEKPIRIPGPDHPITVERNPGRVVVKLDGRVVADTRDALTLREASYPPVQYIPRNDVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ TYCP+KG+ASYYS+ G+ + +WTYENP+ AV I H+A YPD+ + Sbjct 61 SLLARTDHGTYCPYKGDASYYSIAA-GGERSKNAVWTYENPHDAVREIKDHMAFYPDRVD 119 >gi|187924811|ref|YP_001896453.1| hypothetical protein Bphyt_2835 [Burkholderia phytofirmans PsJN] gi|187716005|gb|ACD17229.1| protein of unknown function DUF427 [Burkholderia phytofirmans PsJN] Length=127 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 60/120 (50%), Positives = 83/120 (70%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M+ + + P DHPIT+EP+N RV V V G+V+ADT AL L+EASYP V YIP DV Sbjct 1 MTEKTIKVPGPDHPITVEPSNARVVVSVGGKVIADTLKALVLREASYPPVYYIPRNDVEM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ + G+ + +WTYE+PY AV IA H+A YP++ + Sbjct 61 TLLERTDHATYCPYKGDCAYYSIPS-GGEKTVNAVWTYESPYAAVKEIAQHLAFYPNRVD 119 >gi|16264705|ref|NP_437497.1| hypothetical protein SM_b21379 [Sinorhizobium meliloti 1021] gi|15140843|emb|CAC49357.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length=124 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/120 (51%), Positives = 80/120 (67%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS + + P DHPIT+E RV V+++G VVADT AL L+EASYP VQY+P DV Sbjct 1 MSEKPIRIPGPDHPITVERNPGRVVVKLDGRVVADTRDALTLREASYPPVQYVPRNDVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ TYCP+KG+ASYYS+ G+ + +WTYENP+ AV I H+A YPD+ + Sbjct 61 SLLARTDHGTYCPYKGDASYYSIAA-GGERSKNAVWTYENPHDAVREIKDHMAFYPDRVD 119 >gi|221196822|ref|ZP_03569869.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] gi|221203491|ref|ZP_03576510.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221177425|gb|EEE09853.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221183376|gb|EEE15776.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] Length=135 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/118 (55%), Positives = 79/118 (67%), Gaps = 1/118 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 +R V P DHPIT+ P RV V V G VADT AL L+EASYPAV YIP DV Sbjct 9 SRPVKTPGPDHPITVSPHPSRVVVTVAGRTVADTQRALALREASYPAVLYIPREDVDMTL 68 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ + V+ V WTYE+PYPAV AI GH+A YPD+ + Sbjct 69 LQRTDHATYCPYKGDCAYYSIPSGGARAVNAV-WTYEHPYPAVEAIRGHLAFYPDRVD 125 >gi|111220023|ref|YP_710817.1| hypothetical protein FRAAL0533 [Frankia alni ACN14a] gi|111147555|emb|CAJ59208.1| conserved hypothetical protein [Frankia alni ACN14a] Length=105 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/98 (60%), Positives = 76/98 (78%), Gaps = 0/98 (0%) Query 26 VRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTETSTYCPFKGEASYYSVTT 85 VR++G VVAD+ + L+EASYP VQYIP+ADV Q L R++T++YCP+KG+ASYYSV T Sbjct 3 VRIDGRVVADSHDSRTLREASYPPVQYIPIADVDQSVLRRSDTTSYCPYKGDASYYSVET 62 Query 86 DAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEISI 123 G + DV+WTYE PYPAVA IAG +A Y D+ EI++ Sbjct 63 SDGTTLRDVIWTYETPYPAVADIAGRIAFYADRVEITL 100 >gi|134293298|ref|YP_001117034.1| hypothetical protein Bcep1808_4606 [Burkholderia vietnamiensis G4] gi|134136455|gb|ABO57569.1| protein of unknown function DUF427 [Burkholderia vietnamiensis G4] Length=135 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/118 (55%), Positives = 78/118 (67%), Gaps = 1/118 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 +R V P DHPITIEP RV V+ G VVADT AL L+EASYPAV YIP D Sbjct 9 SRPVKSPGPDHPITIEPHPSRVVVKAGGTVVADTRRALALREASYPAVLYIPRDDADMSL 68 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ V+ V WTYE+P PAV AI GH+A YPD+ + Sbjct 69 LQRTDHATYCPYKGDCAYYSIPAGGARAVNAV-WTYEHPNPAVEAIRGHLAFYPDRVD 125 >gi|330821389|ref|YP_004350251.1| hypothetical protein bgla_2g23080 [Burkholderia gladioli BSR3] gi|327373384|gb|AEA64739.1| hypothetical protein bgla_2g23080 [Burkholderia gladioli BSR3] Length=128 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/119 (51%), Positives = 83/119 (70%), Gaps = 1/119 (0%) Query 2 SNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQD 61 S+R V P DHPITI PT V+V +G +ADT AL L+EASYP VQYIP AD+ Sbjct 5 SDRPVRVPGPDHPITIAPTGAHVRVLADGAPLADTHGALTLREASYPPVQYIPRADIDVT 64 Query 62 RLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 R++R+ ++YCP+KGEA+YYS+ G ++ +W+YE+P+ AVA IAGH A YP++ + Sbjct 65 RVVRSSHTSYCPYKGEATYYSIPA-LGPRGENAIWSYESPHEAVAPIAGHFAFYPERVD 122 >gi|296158171|ref|ZP_06841003.1| protein of unknown function DUF427 [Burkholderia sp. Ch1-1] gi|295891507|gb|EFG71293.1| protein of unknown function DUF427 [Burkholderia sp. Ch1-1] Length=127 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/120 (51%), Positives = 81/120 (68%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M+ + + P DHPIT+EP RV V V G+V+ADT AL L+EASYPAV YIP DV Sbjct 1 MAEKTIKVPGPDHPITVEPAKARVVVTVAGKVIADTQKALVLREASYPAVYYIPRNDVEM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ G+ + +WTYE+PY AV IA H+A YPD+ + Sbjct 61 TLLERTDHATYCPYKGDCAYYSIPL-GGERTLNAVWTYESPYAAVKEIAQHLAFYPDRVD 119 >gi|115523633|ref|YP_780544.1| hypothetical protein RPE_1615 [Rhodopseudomonas palustris BisA53] gi|115517580|gb|ABJ05564.1| protein of unknown function DUF427 [Rhodopseudomonas palustris BisA53] Length=121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 56/117 (48%), Positives = 79/117 (68%), Gaps = 1/117 (0%) Query 9 PSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTET 68 P DHPI+I P +RV+V V+A+T+ AL L E YPAVQYIP D ++R++ Sbjct 4 PGPDHPISITPNPKRVRVSAGAVVIAETSRALTLHEGRYPAVQYIPREDANAALMVRSDR 63 Query 69 STYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEISIFP 125 ST+CP+KG+ASY+ + T+AG I D+ +W+YE P+PA+A I ++A YPDK I P Sbjct 64 STHCPYKGDASYFGIKTEAGTI-DNAIWSYEEPFPAMAEIRNYLAFYPDKVTIEQLP 119 >gi|115358165|ref|YP_775303.1| hypothetical protein Bamb_3415 [Burkholderia ambifaria AMMD] gi|115283453|gb|ABI88969.1| protein of unknown function DUF427 [Burkholderia ambifaria AMMD] Length=135 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/118 (53%), Positives = 79/118 (67%), Gaps = 1/118 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 +R V P DHPITIEP RV VRV G+ VADT AL L+EASYPAV YIP D Sbjct 9 SRPVKSPGPDHPITIEPHPSRVVVRVAGKTVADTRRALALREASYPAVLYIPREDADMSL 68 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ G+ + +WTYE+P PAV +I H+A YPD+ + Sbjct 69 LQRTDHATYCPYKGDCAYYSIPA-GGERATNAVWTYEHPNPAVESIRAHLAFYPDRVD 125 >gi|91784499|ref|YP_559705.1| hypothetical protein Bxe_A1300 [Burkholderia xenovorans LB400] gi|91688453|gb|ABE31653.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length=127 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/120 (51%), Positives = 82/120 (69%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 M+ + + P DHPIT+EP + RV V V G+V+ADT AL L+EASYPAV YIP DV Sbjct 1 MAEKTIKVPGPDHPITVEPASARVVVTVAGKVIADTQKALVLREASYPAVYYIPRDDVEM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ G+ + +WTYE+PY AV IA H+A YPD+ + Sbjct 61 ALLQRTDHATYCPYKGDCAYYSIPL-GGERTVNAVWTYESPYAAVKEIAQHLAFYPDRVD 119 >gi|167565412|ref|ZP_02358328.1| hypothetical protein BoklE_22854 [Burkholderia oklahomensis EO147] gi|167572514|ref|ZP_02365388.1| hypothetical protein BoklC_21941 [Burkholderia oklahomensis C6786] Length=126 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/118 (51%), Positives = 79/118 (67%), Gaps = 1/118 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 S+ V P DHPITIE T RV V+ G +AD+ AL L+EASYP VQY+P DV Sbjct 3 QSSHTVKIPGPDHPITIEATGERVVVKAGGHALADSRDALTLREASYPPVQYVPRKDVDM 62 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDK 118 RL RT +++CP+KG+ASYYSV AG+ + +W+YE P+ A+ IAGH+A YPD+ Sbjct 63 SRLERTTHTSHCPYKGDASYYSV-KGAGERGVNAVWSYETPHDAMKQIAGHLAFYPDR 119 >gi|222087665|ref|YP_002546202.1| hypothetical protein Arad_4589 [Agrobacterium radiobacter K84] gi|221725113|gb|ACM28269.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length=125 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/120 (52%), Positives = 81/120 (68%), Gaps = 1/120 (0%) Query 1 MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQ 60 MS + V P DHPITIE T+ V V V G+V+ADT AL L+EASYPAV YIP DV Sbjct 1 MSEKPVKIPGPDHPITIEDTHAHVTVSVAGKVIADTREALSLKEASYPAVLYIPRKDVDM 60 Query 61 DRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ G+ + +WTYENPYP+V I ++A YPD+ + Sbjct 61 SALERTDHATYCPYKGDCAYYSIPA-GGERSVNAIWTYENPYPSVGRIKDYMAFYPDRVD 119 >gi|254253787|ref|ZP_04947104.1| hypothetical protein BDAG_03065 [Burkholderia dolosa AUO158] gi|124898432|gb|EAY70275.1| hypothetical protein BDAG_03065 [Burkholderia dolosa AUO158] Length=135 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 61/118 (52%), Positives = 79/118 (67%), Gaps = 1/118 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 +R V P DHPI IEP RV V+V G++VADT AL L+EA YPAV YIP D Sbjct 9 SRPVKSPGPDHPIAIEPHPARVVVKVAGKIVADTRRALALREADYPAVLYIPREDADMTL 68 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ G+ + +WTYE+PYPAV AI GH+A YP + + Sbjct 69 LQRTDHATYCPYKGDCAYYSIPA-GGERAINAVWTYEHPYPAVEAIQGHLAFYPGRVD 125 >gi|172062953|ref|YP_001810604.1| hypothetical protein BamMC406_3922 [Burkholderia ambifaria MC40-6] gi|171995470|gb|ACB66388.1| protein of unknown function DUF427 [Burkholderia ambifaria MC40-6] Length=135 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/118 (52%), Positives = 79/118 (67%), Gaps = 1/118 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 +R V P DHPITIEP RV V+V G+ VADT AL L+EASYPAV YIP D Sbjct 9 SRPVKSPGPDHPITIEPHPSRVVVKVAGKTVADTRRALALREASYPAVLYIPREDADMSL 68 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ G+ + +WTYE+P PAV +I H+A YPD+ + Sbjct 69 LQRTDHATYCPYKGDCAYYSIPA-GGERATNAVWTYEHPNPAVESIRAHLAFYPDRVD 125 >gi|171317750|ref|ZP_02906932.1| protein of unknown function DUF427 [Burkholderia ambifaria MEX-5] gi|171097100|gb|EDT41953.1| protein of unknown function DUF427 [Burkholderia ambifaria MEX-5] Length=135 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/118 (52%), Positives = 79/118 (67%), Gaps = 1/118 (0%) Query 3 NRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDR 62 +R V P DHPITIEP RV V+V G+ VADT AL L+EASYPAV YIP D Sbjct 9 SRPVKSPGPDHPITIEPHPSRVVVKVAGKTVADTRRALALREASYPAVLYIPREDADMSL 68 Query 63 LIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAE 120 L RT+ +TYCP+KG+ +YYS+ G+ + +WTYE+P PAV +I H+A YPD+ + Sbjct 69 LQRTDHATYCPYKGDCAYYSIPA-GGERATNAVWTYEHPNPAVESIRAHLAFYPDRVD 125 Lambda K H 0.318 0.133 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129836892488 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40