BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0152c
Length=525
Score E
Sequences producing significant alignments: (Bits) Value
gi|31791330|ref|NP_853823.1| PE family protein [Mycobacterium bo... 1050 0.0
gi|289441524|ref|ZP_06431268.1| LOW QUALITY PROTEIN: PE family p... 1049 0.0
gi|15839534|ref|NP_334571.1| PE family protein [Mycobacterium tu... 1049 0.0
gi|289764268|ref|ZP_06523646.1| PE family protein [Mycobacterium... 1048 0.0
gi|148821344|ref|YP_001286098.1| PE family protein [Mycobacteriu... 1046 0.0
gi|167970270|ref|ZP_02552547.1| PE family protein [Mycobacterium... 971 0.0
gi|339293217|gb|AEJ45328.1| PE family protein [Mycobacterium tub... 971 0.0
gi|254549087|ref|ZP_05139534.1| PE family protein [Mycobacterium... 969 0.0
gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacteriu... 715 0.0
gi|289756215|ref|ZP_06515593.1| predicted protein [Mycobacterium... 668 0.0
gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacteriu... 609 4e-172
gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacteriu... 539 6e-151
gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tu... 421 2e-115
gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacteriu... 412 6e-113
gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium... 409 8e-112
gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium... 408 1e-111
gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tu... 408 1e-111
gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bo... 408 2e-111
gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacteriu... 407 2e-111
gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium... 407 3e-111
gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium... 406 5e-111
gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacteriu... 399 9e-109
gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium... 376 6e-102
gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacteriu... 370 4e-100
gi|183981048|ref|YP_001849339.1| PPE family protein [Mycobacteri... 369 6e-100
gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium... 353 6e-95
gi|57116915|ref|YP_177839.1| PPE family protein [Mycobacterium t... 348 1e-93
gi|289443272|ref|ZP_06433016.1| PPE family protein [Mycobacteriu... 348 1e-93
gi|15841269|ref|NP_336306.1| PPE family protein [Mycobacterium t... 348 1e-93
gi|307084416|ref|ZP_07493529.1| PE-PPE domain protein [Mycobacte... 348 1e-93
gi|31792988|ref|NP_855481.1| PPE family protein [Mycobacterium b... 347 3e-93
gi|121637701|ref|YP_977924.1| PPE family protein [Mycobacterium ... 347 4e-93
gi|289574477|ref|ZP_06454704.1| PPE family protein [Mycobacteriu... 345 9e-93
gi|289569870|ref|ZP_06450097.1| PPE family protein [Mycobacteriu... 344 2e-92
gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacteriu... 344 3e-92
gi|333989608|ref|YP_004522222.1| PE family protein [Mycobacteriu... 341 1e-91
gi|183981512|ref|YP_001849803.1| PPE family protein, PPE28 [Myco... 338 2e-90
gi|118617931|ref|YP_906263.1| PPE family protein [Mycobacterium ... 334 2e-89
gi|308231943|ref|ZP_07663959.1| PPE family protein [Mycobacteriu... 334 2e-89
gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacteriu... 334 3e-89
gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacteriu... 331 2e-88
gi|118616727|ref|YP_905059.1| PE family protein [Mycobacterium u... 327 3e-87
gi|240168156|ref|ZP_04746815.1| PE family protein [Mycobacterium... 317 3e-84
gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacteriu... 300 5e-79
gi|240168595|ref|ZP_04747254.1| PPE family protein, PPE28 [Mycob... 295 2e-77
gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacteri... 293 6e-77
gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobac... 252 1e-64
gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium... 249 7e-64
gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium u... 249 1e-63
gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacteriu... 244 4e-62
>gi|31791330|ref|NP_853823.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116695|ref|YP_177696.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121636064|ref|YP_976287.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
28 more sequence titles
Length=525
Score = 1050 bits (2716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/525 (100%), Positives = 525/525 (100%), Gaps = 0/525 (0%)
Query 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV
Sbjct 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
Query 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL
Sbjct 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
Query 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG
Sbjct 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
Query 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD
Sbjct 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
Query 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 300
GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT
Sbjct 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 300
Query 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 360
ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP
Sbjct 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 360
Query 361 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 420
PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT
Sbjct 361 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 420
Query 421 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI
Sbjct 421 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
Query 481 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 525
DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ
Sbjct 481 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 525
>gi|289441524|ref|ZP_06431268.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis
T46]
gi|289414443|gb|EFD11683.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis
T46]
Length=532
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/525 (100%), Positives = 525/525 (100%), Gaps = 0/525 (0%)
Query 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV
Sbjct 8 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 67
Query 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL
Sbjct 68 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 127
Query 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG
Sbjct 128 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 187
Query 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD
Sbjct 188 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 247
Query 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 300
GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT
Sbjct 248 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 307
Query 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 360
ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP
Sbjct 308 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 367
Query 361 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 420
PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT
Sbjct 368 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 427
Query 421 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI
Sbjct 428 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 487
Query 481 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 525
DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ
Sbjct 488 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 532
>gi|15839534|ref|NP_334571.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|254366604|ref|ZP_04982648.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|289747919|ref|ZP_06507297.1| PE family protein [Mycobacterium tuberculosis 02_1987]
13 more sequence titles
Length=533
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/525 (100%), Positives = 525/525 (100%), Gaps = 0/525 (0%)
Query 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV
Sbjct 9 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 68
Query 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL
Sbjct 69 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 128
Query 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG
Sbjct 129 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 188
Query 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD
Sbjct 189 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 248
Query 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 300
GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT
Sbjct 249 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 308
Query 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 360
ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP
Sbjct 309 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 368
Query 361 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 420
PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT
Sbjct 369 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 428
Query 421 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI
Sbjct 429 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 488
Query 481 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 525
DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ
Sbjct 489 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 533
>gi|289764268|ref|ZP_06523646.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289711774|gb|EFD75790.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|344217971|gb|AEM98601.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=525
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/525 (99%), Positives = 524/525 (99%), Gaps = 0/525 (0%)
Query 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV
Sbjct 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
Query 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL
Sbjct 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
Query 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG
Sbjct 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
Query 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD
Sbjct 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
Query 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 300
GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYT VTDYYIIRT
Sbjct 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTEVTDYYIIRT 300
Query 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 360
ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP
Sbjct 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 360
Query 361 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 420
PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT
Sbjct 361 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 420
Query 421 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI
Sbjct 421 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
Query 481 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 525
DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ
Sbjct 481 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 525
>gi|148821344|ref|YP_001286098.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253797072|ref|YP_003030073.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552403|ref|ZP_06441613.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|148719871|gb|ABR04496.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253318575|gb|ACT23178.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289437035|gb|EFD19528.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|328456861|gb|AEB02284.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
Length=533
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/525 (99%), Positives = 524/525 (99%), Gaps = 0/525 (0%)
Query 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV
Sbjct 9 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 68
Query 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL
Sbjct 69 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 128
Query 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG
Sbjct 129 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 188
Query 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD
Sbjct 189 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 248
Query 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 300
GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYT VTDYYIIRT
Sbjct 249 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTEVTDYYIIRT 308
Query 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 360
ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP
Sbjct 309 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVP 368
Query 361 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 420
PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT
Sbjct 369 PQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNT 428
Query 421 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI
Sbjct 429 LARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 488
Query 481 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 525
DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ
Sbjct 489 DSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ 533
>gi|167970270|ref|ZP_02552547.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|294994623|ref|ZP_06800314.1| PE family protein [Mycobacterium tuberculosis 210]
gi|306774239|ref|ZP_07412576.1| PE-PPE domain protein [Mycobacterium tuberculosis SUMu001]
7 more sequence titles
Length=490
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/490 (99%), Positives = 490/490 (100%), Gaps = 0/490 (0%)
Query 36 LAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP 95
+AAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP
Sbjct 1 MAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP 60
Query 96 SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN 155
SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN
Sbjct 61 SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN 120
Query 156 AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT 215
AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT
Sbjct 121 AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT 180
Query 216 LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA 275
LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA
Sbjct 181 LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA 240
Query 276 QVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY 335
QVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY
Sbjct 241 QVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY 300
Query 336 GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ 395
GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ
Sbjct 301 GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ 360
Query 396 IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFV 455
IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFV
Sbjct 361 IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFV 420
Query 456 RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR 515
RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR
Sbjct 421 RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR 480
Query 516 PPTTVYRPRQ 525
PPTTVYRPRQ
Sbjct 481 PPTTVYRPRQ 490
>gi|339293217|gb|AEJ45328.1| PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=490
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)
Query 36 LAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP 95
+AAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP
Sbjct 1 MAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP 60
Query 96 SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN 155
SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN
Sbjct 61 SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN 120
Query 156 AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT 215
AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT
Sbjct 121 AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT 180
Query 216 LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA 275
LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA
Sbjct 181 LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA 240
Query 276 QVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY 335
QVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY
Sbjct 241 QVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY 300
Query 336 GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ 395
GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ
Sbjct 301 GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ 360
Query 396 IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFV 455
IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIAL LVTTLPLYTTQLFV
Sbjct 361 IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALGLVTTLPLYTTQLFV 420
Query 456 RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR 515
RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR
Sbjct 421 RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR 480
Query 516 PPTTVYRPRQ 525
PPTTVYRPRQ
Sbjct 481 PPTTVYRPRQ 490
>gi|254549087|ref|ZP_05139534.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297632626|ref|ZP_06950406.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297729601|ref|ZP_06958719.1| PE family protein [Mycobacterium tuberculosis KZN R506]
gi|313656928|ref|ZP_07813808.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
Length=490
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)
Query 36 LAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP 95
+AAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP
Sbjct 1 MAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPP 60
Query 96 SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN 155
SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN
Sbjct 61 SMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGN 120
Query 156 AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT 215
AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT
Sbjct 121 AVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPT 180
Query 216 LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA 275
LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA
Sbjct 181 LDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPA 240
Query 276 QVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY 335
QVEGATKLPTSPGYT VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY
Sbjct 241 QVEGATKLPTSPGYTEVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGY 300
Query 336 GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ 395
GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ
Sbjct 301 GDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQ 360
Query 396 IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFV 455
IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFV
Sbjct 361 IQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFV 420
Query 456 RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR 515
RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR
Sbjct 421 RQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRR 480
Query 516 PPTTVYRPRQ 525
PPTTVYRPRQ
Sbjct 481 PPTTVYRPRQ 490
>gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacterium canettii CIPT 140010059]
gi|340003378|emb|CCC42498.1| pe family protein [Mycobacterium canettii CIPT 140010059]
Length=550
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/462 (90%), Positives = 426/462 (93%), Gaps = 3/462 (0%)
Query 24 KSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTL 83
+ F RFHQTLAAAA++YADAEAAIAST QNQLAVPAAAPTPAAAAM+PPFPANLTTL
Sbjct 68 QVEAFHSRFHQTLAAAAHTYADAEAAIASTLQNQLAVPAAAPTPAAAAMVPPFPANLTTL 127
Query 84 FFGPTGIPLPPPSMLTPP--IRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTI 141
FFGPTGIPLPPPS + + RS ALQAVFTPEELYPLTGVRSLVLNTSVEEGLTI
Sbjct 128 FFGPTGIPLPPPSYVDAANMLYVRSAG-ALQAVFTPEELYPLTGVRSLVLNTSVEEGLTI 186
Query 142 LHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPN 201
+HDAIM ELA GN VTVFGWSQSAIIASLEM R AMG AAP ASDLNFVLVGNEMNPN
Sbjct 187 MHDAIMGELAIPGNTVTVFGWSQSAIIASLEMHRLAAMGPAAPPASDLNFVLVGNEMNPN 246
Query 202 GGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAG 261
GGMLARFPDLTLP+L LTFYGATPSDTIYPTAIYTLEYDGFADF RYPLN ISDLNAVAG
Sbjct 247 GGMLARFPDLTLPSLGLTFYGATPSDTIYPTAIYTLEYDGFADFPRYPLNIISDLNAVAG 306
Query 262 ITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLAD 321
ITFVHTKYLDLTPAQV+GATKLPTSPGYTGVTDYYIIRTEN PLLQPLRAVPVIGDPLAD
Sbjct 307 ITFVHTKYLDLTPAQVDGATKLPTSPGYTGVTDYYIIRTENLPLLQPLRAVPVIGDPLAD 366
Query 322 LIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTA 381
LIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWP+VPPQVIADALAAGTQ+GILDFTA
Sbjct 367 LIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPDVPPQVIADALAAGTQQGILDFTA 426
Query 382 DLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALA 441
DLQALSAQPLTLPQIQLPQPADLVAAVAAAP P EVVNTLARIISTNYAVLLPT DIALA
Sbjct 427 DLQALSAQPLTLPQIQLPQPADLVAAVAAAPRPEEVVNTLARIISTNYAVLLPTADIALA 486
Query 442 LVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDSG 483
LVTTLPLYTTQLFV QLAAGNLINAIGYPLAATVGLGTI G
Sbjct 487 LVTTLPLYTTQLFVSQLAAGNLINAIGYPLAATVGLGTIAGG 528
>gi|289756215|ref|ZP_06515593.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289696802|gb|EFD64231.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length=386
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/339 (99%), Positives = 334/339 (99%), Gaps = 0/339 (0%)
Query 1 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 60
MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV
Sbjct 9 MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAV 68
Query 61 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 120
PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL
Sbjct 69 PAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRALQAVFTPEEL 128
Query 121 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 180
YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG
Sbjct 129 YPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG 188
Query 181 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 240
GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD
Sbjct 189 GAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYD 248
Query 241 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 300
GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT
Sbjct 249 GFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRT 308
Query 301 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPN 339
ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVN G P
Sbjct 309 ENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNPGLRRPE 347
>gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacterium marinum M]
gi|183173727|gb|ACC38837.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 609 bits (1570), Expect = 4e-172, Method: Compositional matrix adjust.
Identities = 316/469 (68%), Positives = 373/469 (80%), Gaps = 7/469 (1%)
Query 16 RNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPP 75
R + + F F QTLAAA +YA EAA + + L +P+AAP ++A+ IPP
Sbjct 60 RECQAVLAQVEAFRSEFAQTLAAAGVAYAQTEAASLAALRGALGIPSAAPAVSSASTIPP 119
Query 76 FPANLTTLFFGPTGIPLPPPSMLTPP----IRCRSVRRALQAVFTPEELYPLTGVRSLVL 131
F ANLT+LF GPTG+P+P S + +R + R L +TPEELYPLTGV+SL L
Sbjct 120 FTANLTSLFLGPTGVPIPDESYVQAANNLFVRSSDILRPL---YTPEELYPLTGVKSLTL 176
Query 132 NTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNF 191
N SVEEGLTIL +AIM +L+ GN+VTVFG+SQSAIIASLEMQ+ A+G +AP+AS LNF
Sbjct 177 NASVEEGLTILDNAIMAQLSIPGNSVTVFGYSQSAIIASLEMQKLAALGPSAPTASQLNF 236
Query 192 VLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLN 251
VLVGNEMNPNGGMLARFPDL+LP+L LTFYGATPSDTIYPTAIYTLEYDGFADF RYPLN
Sbjct 237 VLVGNEMNPNGGMLARFPDLSLPSLGLTFYGATPSDTIYPTAIYTLEYDGFADFPRYPLN 296
Query 252 FISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRA 311
FI+DLNAV GI FVH KYLDLT AQV+ A +LPTSPGY+GVT YY+I TEN PLL+PLRA
Sbjct 297 FIADLNAVMGIPFVHVKYLDLTAAQVDSAIELPTSPGYSGVTSYYVIPTENLPLLEPLRA 356
Query 312 VPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAG 371
+PVIG+PLA+LIQP+LKVIVNLGYGDPNYGYSTSYADVRTPFGL+P+V P I DALAAG
Sbjct 357 IPVIGNPLANLIQPDLKVIVNLGYGDPNYGYSTSYADVRTPFGLFPDVSPGTIVDALAAG 416
Query 372 TQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAV 431
TQEGI DFTADLQA+ QP+ P I P PAD++ ++ P+PA+VVNTL +++ +YAV
Sbjct 417 TQEGIQDFTADLQAMFGQPIPTPDIVPPTPADILGKLSELPSPAQVVNTLTAVVANDYAV 476
Query 432 LLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTI 480
LLPT DI LA+VTTLPLY+TQLF QL GNLI+A GYP+AATVGL TI
Sbjct 477 LLPTADIGLAVVTTLPLYSTQLFFDQLLQGNLIDAFGYPIAATVGLLTI 525
>gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacterium marinum M]
gi|183176742|gb|ACC41852.1| PE family protein [Mycobacterium marinum M]
Length=549
Score = 539 bits (1388), Expect = 6e-151, Method: Compositional matrix adjust.
Identities = 298/462 (65%), Positives = 346/462 (75%), Gaps = 4/462 (0%)
Query 24 KSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTL 83
+ F F Q LA A N+Y AEAA A+ L VPA + AA + P ANLTTL
Sbjct 68 QVEAFHTEFQQALAQAGNAYVQAEAAGAAALAGALGVPATSAAAPAATIPPFP-ANLTTL 126
Query 84 FFGPTGIPLPPPSM--LTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTI 141
G TGIP+P P L + RS AL + TPEELYPLTG +SL L+ SV EGLTI
Sbjct 127 VMGGTGIPIPGPGFINLANELYVRS-ANALLGLNTPEELYPLTGTKSLTLDASVSEGLTI 185
Query 142 LHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPN 201
L +AIM +LA GN VTVFG SQSA+IASLEMQ+ A+G AAP+AS LNFVL+GNEMNPN
Sbjct 186 LDNAIMEQLAIPGNTVTVFGVSQSAVIASLEMQKLAALGPAAPTASQLNFVLLGNEMNPN 245
Query 202 GGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAG 261
GG+LARFPDL++P+L LTFYG TPSDTIYPTA YTLEYDGFADF RYPLNFISDLNAV G
Sbjct 246 GGLLARFPDLSIPSLGLTFYGGTPSDTIYPTANYTLEYDGFADFPRYPLNFISDLNAVMG 305
Query 262 ITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLAD 321
I +VH YLDLT AQV+ A L TSPGY+GVT YYI+ TEN PLL+PLRA+PVIG+PLA+
Sbjct 306 IVYVHPTYLDLTQAQVDNAIPLATSPGYSGVTSYYILPTENLPLLEPLRAIPVIGNPLAN 365
Query 322 LIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTA 381
LIQP+LKV+VNLGYGDP YGYSTS AD+ TPFGL+P+VPP VIADAL AGT++GI DF+A
Sbjct 366 LIQPDLKVLVNLGYGDPAYGYSTSPADITTPFGLFPDVPPHVIADALVAGTKQGISDFSA 425
Query 382 DLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALA 441
D+Q + +QP TLP + Q DL+AA+AAAPTP EVVNTL +I+S +YA LLP DI A
Sbjct 426 DIQQMFSQPATLPSPPMLQAPDLMAALAAAPTPVEVVNTLTKIVSDDYATLLPLADIGTA 485
Query 442 LVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDSG 483
V T+P Y LFV QL GNLINA GYP+AA VGL I G
Sbjct 486 FVITMPTYDATLFVDQLLQGNLINAFGYPIAADVGLTAISGG 527
>gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|254233542|ref|ZP_04926868.1| PE family protein [Mycobacterium tuberculosis C]
gi|254366603|ref|ZP_04982647.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|13879644|gb|AAK44384.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|124603335|gb|EAY61610.1| PE family protein [Mycobacterium tuberculosis C]
gi|134152115|gb|EBA44160.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323717137|gb|EGB26346.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=588
Score = 421 bits (1081), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 253/486 (53%), Positives = 306/486 (63%), Gaps = 25/486 (5%)
Query 16 RNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPP 75
+ + S + F F Q LAAA N++ +AEA S + A P + ++PP
Sbjct 98 QQFQAISAQVAAFHNEFTQRLAAATNAFVNAEATNTSALVQE--ATAGLFKPTSPPVLPP 155
Query 76 FPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEELYPLTGVRS 128
T + G TG P+P PS + P+ V +AL TPEELYP+TGV+S
Sbjct 156 MFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEELYPITGVKS 212
Query 129 LVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASD 188
L TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++G APS S
Sbjct 213 LPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQ 271
Query 189 LNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRY 248
LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEYDGFADF RY
Sbjct 272 LNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEYDGFADFPRY 330
Query 249 PLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQP 308
PLN +SD+NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII TE+ PLL P
Sbjct 331 PLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAP 388
Query 309 LRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADAL 368
LRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+VP V+ADAL
Sbjct 389 LRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADAL 448
Query 369 AAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPTPAEVVNTLA 422
AGTQ+G+ DF +L A TLPQ +P T + +T A
Sbjct 449 VAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFA 505
Query 423 RIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDS 482
++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAAT+GL +
Sbjct 506 SVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGG 565
Query 483 GRRGIA 488
IA
Sbjct 566 MIEFIA 571
>gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552402|ref|ZP_06441612.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|297632625|ref|ZP_06950405.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
6 more sequence titles
Length=588
Score = 412 bits (1060), Expect = 6e-113, Method: Compositional matrix adjust.
Identities = 253/487 (52%), Positives = 306/487 (63%), Gaps = 25/487 (5%)
Query 15 ARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIP 74
+ + S + F F Q LAAAA ++ +AEA S + A P + ++P
Sbjct 97 GQQFQAISAQVAAFHNEFTQRLAAAAKAFVNAEATNTSALVQEAT--AGLFKPTSPPVLP 154
Query 75 PFPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEELYPLTGVR 127
P T + G TG P+P PS + P+ V +AL TPEELYP+TGV+
Sbjct 155 PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEELYPITGVK 211
Query 128 SLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSAS 187
SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++G APS S
Sbjct 212 SLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPS 270
Query 188 DLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSR 247
LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEYDGFADF R
Sbjct 271 QLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEYDGFADFPR 329
Query 248 YPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQ 307
YPLN +SD+NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII TE+ PLL
Sbjct 330 YPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLA 387
Query 308 PLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADA 367
PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+VP V+ADA
Sbjct 388 PLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADA 447
Query 368 LAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPTPAEVVNTL 421
L AGTQ+G+ DF +L A TLPQ +P T + +T
Sbjct 448 LVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTF 504
Query 422 ARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTID 481
A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAAT+GL +
Sbjct 505 ASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALG 564
Query 482 SGRRGIA 488
IA
Sbjct 565 GMIEFIA 571
>gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium tuberculosis SUMu001]
gi|308379707|ref|ZP_07487233.2| PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308380909|ref|ZP_07491451.2| PE family protein [Mycobacterium tuberculosis SUMu011]
7 more sequence titles
Length=560
Score = 409 bits (1050), Expect = 8e-112, Method: Compositional matrix adjust.
Identities = 239/435 (55%), Positives = 285/435 (66%), Gaps = 23/435 (5%)
Query 67 PAAAAMIPPFPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEE 119
P + ++PP T + G TG P+P PS + P+ V +AL TPEE
Sbjct 119 PTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEE 175
Query 120 LYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAM 179
LYP+TGV+SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++
Sbjct 176 LYPITGVKSLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISL 234
Query 180 GGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
G APS S LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEY
Sbjct 235 GPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEY 293
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DGFADF RYPLN +SD+NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII
Sbjct 294 DGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIE 351
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
TE+ PLL PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+V
Sbjct 352 TEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDV 411
Query 360 PPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPT 413
P V+ADAL AGTQ+G+ DF +L A TLPQ +P T
Sbjct 412 PASVVADALVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQPAT 468
Query 414 PAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAA 473
+ +T A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAA
Sbjct 469 LINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAA 528
Query 474 TVGLGTIDSGRRGIA 488
T+GL + IA
Sbjct 529 TIGLAALGGMIEFIA 543
>gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339630233|ref|YP_004721875.1| PE family protein [Mycobacterium africanum GM041182]
gi|289537161|gb|EFD41739.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339329589|emb|CCC25225.1| PE family protein [Mycobacterium africanum GM041182]
Length=588
Score = 408 bits (1048), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 239/435 (55%), Positives = 285/435 (66%), Gaps = 23/435 (5%)
Query 67 PAAAAMIPPFPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEE 119
P + ++PP T + G TG P+P PS + P+ V +AL TPEE
Sbjct 147 PTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEE 203
Query 120 LYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAM 179
LYP+TGV+SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++
Sbjct 204 LYPITGVKSLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISL 262
Query 180 GGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
G APS S LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEY
Sbjct 263 GPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEY 321
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DGFADF RYPLN +SD+NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII
Sbjct 322 DGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIE 379
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
TE+ PLL PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+V
Sbjct 380 TEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDV 439
Query 360 PPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPT 413
P V+ADAL AGTQ+G+ DF +L A TLPQ +P T
Sbjct 440 PASVVADALVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQLAT 496
Query 414 PAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAA 473
+ +T A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAA
Sbjct 497 LINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAA 556
Query 474 TVGLGTIDSGRRGIA 488
T+GL + IA
Sbjct 557 TIGLAALGGMIEFIA 571
>gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659915|ref|YP_001281438.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|148821343|ref|YP_001286097.1| PE family protein [Mycobacterium tuberculosis F11]
25 more sequence titles
Length=588
Score = 408 bits (1048), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 239/435 (55%), Positives = 285/435 (66%), Gaps = 23/435 (5%)
Query 67 PAAAAMIPPFPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEE 119
P + ++PP T + G TG P+P PS + P+ V +AL TPEE
Sbjct 147 PTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEE 203
Query 120 LYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAM 179
LYP+TGV+SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++
Sbjct 204 LYPITGVKSLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISL 262
Query 180 GGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
G APS S LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEY
Sbjct 263 GPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEY 321
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DGFADF RYPLN +SD+NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII
Sbjct 322 DGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIE 379
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
TE+ PLL PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+V
Sbjct 380 TEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDV 439
Query 360 PPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPT 413
P V+ADAL AGTQ+G+ DF +L A TLPQ +P T
Sbjct 440 PASVVADALVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQPAT 496
Query 414 PAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAA 473
+ +T A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAA
Sbjct 497 LINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAA 556
Query 474 TVGLGTIDSGRRGIA 488
T+GL + IA
Sbjct 557 TIGLAALGGMIEFIA 571
>gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636063|ref|YP_976286.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988536|ref|YP_002643223.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616914|emb|CAD93020.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491710|emb|CAL70171.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771649|dbj|BAH24455.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600079|emb|CCC62748.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=588
Score = 408 bits (1048), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 239/435 (55%), Positives = 285/435 (66%), Gaps = 23/435 (5%)
Query 67 PAAAAMIPPFPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEE 119
P + ++PP T + G TG P+P PS + P+ V +AL TPEE
Sbjct 147 PTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEE 203
Query 120 LYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAM 179
LYP+TGV+SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++
Sbjct 204 LYPITGVKSLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISL 262
Query 180 GGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
G APS S LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEY
Sbjct 263 GPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEY 321
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DGFADF RYPLN +SD+NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII
Sbjct 322 DGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIE 379
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
TE+ PLL PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+V
Sbjct 380 TEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDV 439
Query 360 PPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPT 413
P V+ADAL AGTQ+G+ DF +L A TLPQ +P T
Sbjct 440 PASVVADALVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQPAT 496
Query 414 PAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAA 473
+ +T A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAA
Sbjct 497 LINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAA 556
Query 474 TVGLGTIDSGRRGIA 488
T+GL + IA
Sbjct 557 TIGLAALGGMIEFIA 571
>gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003377|emb|CCC42497.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=588
Score = 407 bits (1047), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 240/435 (56%), Positives = 285/435 (66%), Gaps = 23/435 (5%)
Query 67 PAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTP-------PIRCRSVRRALQAVFTPEE 119
P + ++PP T + G TG P+P PS L P+ V +AL TPEE
Sbjct 147 PTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYLNAITTLFIDPVVSNPVIKAL---VTPEE 203
Query 120 LYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAM 179
LYP+TGV+SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++
Sbjct 204 LYPITGVKSLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISL 262
Query 180 GGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
G APS S LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEY
Sbjct 263 GPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEY 321
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DGFADF RYPLN +SD+NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII
Sbjct 322 DGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIE 379
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
TE+ PLL PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+V
Sbjct 380 TEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDV 439
Query 360 PPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPT 413
P V+ADAL AGTQ+G+ DF +L A TLPQ +P T
Sbjct 440 PASVVADALVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTVLPPPPPPQPAT 496
Query 414 PAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAA 473
+ +T A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAA
Sbjct 497 LINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAA 556
Query 474 TVGLGTIDSGRRGIA 488
T+GL + IA
Sbjct 557 TIGLAALGGMIEFIA 571
>gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308370327|ref|ZP_07421092.2| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308371602|ref|ZP_07425459.2| PE family protein [Mycobacterium tuberculosis SUMu004]
9 more sequence titles
Length=560
Score = 407 bits (1046), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 239/435 (55%), Positives = 284/435 (66%), Gaps = 23/435 (5%)
Query 67 PAAAAMIPPFPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEE 119
P + ++PP T + G TG P+P PS + P+ V +AL TPEE
Sbjct 119 PTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEE 175
Query 120 LYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAM 179
LYP+TGV+SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++
Sbjct 176 LYPITGVKSLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISL 234
Query 180 GGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
G APS S LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEY
Sbjct 235 GPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEY 293
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DGFADF RYPLN +SD NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII
Sbjct 294 DGFADFPRYPLNVLSDSNAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIE 351
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
TE+ PLL PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+V
Sbjct 352 TEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDV 411
Query 360 PPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPT 413
P V+ADAL AGTQ+G+ DF +L A TLPQ +P T
Sbjct 412 PASVVADALVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQPAT 468
Query 414 PAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAA 473
+ +T A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAA
Sbjct 469 LINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAA 528
Query 474 TVGLGTIDSGRRGIA 488
T+GL + IA
Sbjct 529 TIGLAALGGMIEFIA 543
>gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|306970340|ref|ZP_07483001.1| PE family protein [Mycobacterium tuberculosis SUMu009]
gi|308347554|gb|EFP36405.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308352180|gb|EFP41031.1| PE family protein [Mycobacterium tuberculosis SUMu009]
Length=588
Score = 406 bits (1043), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 239/435 (55%), Positives = 284/435 (66%), Gaps = 23/435 (5%)
Query 67 PAAAAMIPPFPANLTTLFFGPTGIPLPPPS-------MLTPPIRCRSVRRALQAVFTPEE 119
P + ++PP T + G TG P+P PS + P+ V +AL TPEE
Sbjct 147 PTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL---VTPEE 203
Query 120 LYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAM 179
LYP+TGV+SL TSV+ GL IL AI E GN VTVFG+SQSA+IASLEMQ ++
Sbjct 204 LYPITGVKSLPFQTSVQLGLQILDGAIW-EQINAGNHVTVFGYSQSAVIASLEMQHLISL 262
Query 180 GGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
G APS S LNF+L+GNEMNPNGG+LAR P L + TL L FYGATP D YPT YTLEY
Sbjct 263 GPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATP-DNPYPTTTYTLEY 321
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DGFADF RYPLN +SD NAV GI VHT Y DLTPAQ+ AT+LPT G T T YYII
Sbjct 322 DGFADFPRYPLNVLSDSNAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIE 379
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
TE+ PLL PLRA+PVIG PLA L++PNL+VIVNLGYGDP +GYSTS A+V TPFGL+P+V
Sbjct 380 TEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDV 439
Query 360 PPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP------QPADLVAAVAAAPT 413
P V+ADAL AGTQ+G+ DF +L A TLPQ +P T
Sbjct 440 PASVVADALVAGTQQGVNDFMVELPAALN---TLPQTPMPAFPPYVPTLLPPPPPPQPAT 496
Query 414 PAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAA 473
+ +T A ++ST Y++LLPT D+ LA VT LP Y LFV QLAAGNL AI PLAA
Sbjct 497 LINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAA 556
Query 474 TVGLGTIDSGRRGIA 488
T+GL + IA
Sbjct 557 TIGLAALGGMIEFIA 571
>gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacterium marinum M]
gi|183173729|gb|ACC38839.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 399 bits (1024), Expect = 9e-109, Method: Compositional matrix adjust.
Identities = 252/480 (53%), Positives = 305/480 (64%), Gaps = 23/480 (4%)
Query 21 CSLKSRRFTVRFHQTLAAAANSYADAE----AAIASTRQNQLAVPAAAPTPAAAAMIPPF 76
S + F + Q LA AN Y +AE AA+ L P + PT +P
Sbjct 65 ISTQLAAFHAQIAQRLATVANYYINAEEINNAALLEEATAGLYSPNSPPT------VPAV 118
Query 77 PANLTTLFFGPTGIPLPPPSML----TPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLN 132
+ + G TG P+P S L T I+ + +A+FTPE+LYP+TGV+SL
Sbjct 119 FNDYVAIAMGGTGTPIPSTSYLDAVNTLYIQHIAPGAIAKALFTPEQLYPITGVKSLPFQ 178
Query 133 TSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFV 192
TSV+EGL IL +I E+ GN VTVFG+SQSA+IASLEMQ F ++G AP S +NF+
Sbjct 179 TSVQEGLKILDISIWNEI-NAGNHVTVFGYSQSAVIASLEMQHFISLGPNAPDPSQINFI 237
Query 193 LVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNF 252
L GNEMNPNGG+LAR P L + +L L FYGATP D Y T YTLEYDGFADF RYPLN
Sbjct 238 LTGNEMNPNGGILARIPGLNVASLGLPFYGATP-DNPYYTTTYTLEYDGFADFPRYPLNV 296
Query 253 ISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAV 312
+SD+NAV GI VH Y DLTP Q+ AT LPT TG YY+IRTEN PLL P+RA+
Sbjct 297 LSDVNAVFGILTVHRTYPDLTPEQIASATLLPTEGPTTGT--YYMIRTENLPLLDPVRAI 354
Query 313 PVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGT 372
PVIG+PLA L+QP+LKV+VNLGYGDPNYGYSTS A+V TPFGL+P+V QV+ADAL AGT
Sbjct 355 PVIGEPLAALVQPDLKVLVNLGYGDPNYGYSTSPANVPTPFGLFPDVSLQVVADALVAGT 414
Query 373 QEGILDFTADL-QALSAQPLTLPQIQLP---QPADLVAAVAAAPTPAEVVNTLARIISTN 428
+GI DF A L ALS P P ++ P Q A TP + NTLA ++ST
Sbjct 415 HQGINDFGAALPTALSTTPQIAP-LEFPPYVQSVLPPAPPPMPATPINIANTLASVVSTG 473
Query 429 YAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDSGRRGIA 488
Y+VLLPT DI L VT+LP Y LF+ QLA G+L AI PLAAT GLG + IA
Sbjct 474 YSVLLPTADIGLGFVTSLPAYNLTLFLSQLAQGDLRAAIELPLAATFGLGALGGMIEFIA 533
>gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=560
Score = 376 bits (965), Expect = 6e-102, Method: Compositional matrix adjust.
Identities = 233/485 (49%), Positives = 297/485 (62%), Gaps = 47/485 (9%)
Query 26 RRFTVRFHQTLAAAANSYADAEAAIASTRQNQL-AVPAAAPTPAAAAMIPPFPANLTTLF 84
+ F F +TLAAA YA +EA A+T + A P PT +L
Sbjct 70 KAFQAEFARTLAAAGLVYAQSEATNAATVSASITASPLTGPT--------------VSLI 115
Query 85 FGPTGIPLPPPSMLTPPIRCRSVRRAL---QAVFTPEELYPLTGVRSLVLNTSVEEGLTI 141
G +G P P + + S + QA+FTPE+LYPLTG +SL L TSV +G+ I
Sbjct 116 MGGSGNPTPGIDYVNDLLNYISPQFGATNAQALFTPEQLYPLTGEKSLPLTTSVSQGVQI 175
Query 142 LHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG-GAAPSASDLNFVLVGNEMNP 200
LH+AI+ E+ T GN+V V G+SQSAIIASLEM+ AM G AP A L FVL+ N MNP
Sbjct 176 LHNAILSEVNTLGNSVVVGGYSQSAIIASLEMRNLAAMPPGTAPPADRLGFVLLANPMNP 235
Query 201 NGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVA 260
NGG+L+RF L+LP+L + F+GATP+DTIYPT+IYT EYDGFADF RYPLN +SDLNA+A
Sbjct 236 NGGLLSRFAGLSLPSLGVEFFGATPADTIYPTSIYTHEYDGFADFPRYPLNIVSDLNAIA 295
Query 261 GITFVHTKYLDLTPAQV--EGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDP 318
GI FVHT ++ P + KLPT P Y G T YYIIRT + PLL PLR +PV+G+P
Sbjct 296 GIAFVHTDTPEINPQTLPPGDLIKLPTEPTYNGNTSYYIIRTHHLPLLTPLRFIPVLGNP 355
Query 319 LADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILD 378
LADL++PNL IVNLGYGDP YGYST+ A+V TPFGL+P V P V+A L GTQ+G
Sbjct 356 LADLVEPNLTTIVNLGYGDPRYGYSTAPANVPTPFGLFPEVDPAVVAGELVTGTQQGFNA 415
Query 379 FTADLQALSAQ-PLTLPQIQLPQPADLVAAVA-------AAPTPAE------------VV 418
D+ Q P T+P + + DL+ ++A A PT + +
Sbjct 416 AVNDILGQGPQGPPTVPSLGSSRLVDLLTSIALPPPEILAPPTSIDGLITDLQAANTYLS 475
Query 419 NTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGN---LINAIGYPLA 472
NT++ +S+ Y LLPT DI A +T +P Y LF + Q G+ LINAIGYP+A
Sbjct 476 NTISGGLSSAYESLLPTADILNAGLTEVPSYNLNLFLDGIEQAVNGDPVGLINAIGYPIA 535
Query 473 ATVGL 477
A VGL
Sbjct 536 ADVGL 540
>gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacterium marinum M]
gi|183173728|gb|ACC38838.1| PE family protein [Mycobacterium marinum M]
Length=582
Score = 370 bits (949), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 234/488 (48%), Positives = 295/488 (61%), Gaps = 53/488 (10%)
Query 31 RFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAM----------------IP 74
+F QT+AAA +YA EA+ + N L A T A + +
Sbjct 75 QFTQTVAAAGLAYAQTEASSVAAISNALE---AFGTQAHSLLGGGNAAASATPSASITTT 131
Query 75 PFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVRRAL---QAVFTPEELYPLTGVRSLVL 131
P +L G +G PLP P L + + + QA+FTPE+LYPLTG +SL L
Sbjct 132 PLTGPTVSLVMGGSGNPLPGPDYLADFFNYITPQFGVTTSQALFTPEQLYPLTGEKSLPL 191
Query 132 NTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMG-GAAPSASDLN 190
SV +G+ ILH+AI+ ++A GN+V V G+SQSAIIASLEMQ AM G AP+A L
Sbjct 192 AISVSQGVQILHNAILGQIAE-GNSVVVGGYSQSAIIASLEMQNLAAMPPGTAPTADQLG 250
Query 191 FVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPL 250
F+L+ N MNPNGG+L+RF LTLP+L + FYG+TP+DTIYPT+IYT EYDGFADF RYPL
Sbjct 251 FLLLANPMNPNGGLLSRFAGLTLPSLGVDFYGSTPADTIYPTSIYTHEYDGFADFPRYPL 310
Query 251 NFISDLNAVAGITFVHTKYLDLTPAQV--EGATKLPTSPGYTGVTDYYIIRTENRPLLQP 308
N +SDLNA+AGI FVHT + P + KL TS YTG T YY+I TE PLL+P
Sbjct 311 NIVSDLNAIAGIAFVHTDTPTINPETLPPGDLIKLDTSADYTGNTSYYLIHTERLPLLEP 370
Query 309 LRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADAL 368
LR +PV+G+PLADL+QP+L IVNLGYGDP YGYST+ A++ TPFGL+P V P+V+A L
Sbjct 371 LRFIPVVGNPLADLLQPDLTTIVNLGYGDPRYGYSTAPANIETPFGLFPEVDPKVVAQQL 430
Query 369 AAGTQEGILDFTADLQALSAQPLT----------LPQIQLPQPADLVA---------AVA 409
GTQ+G DL A P T L I LP PA LVA A+
Sbjct 431 VIGTQQGFHSAAHDLVAPQPSPPTPRLFLDIPNPLASIALPPPASLVAPTSIDGFINALQ 490
Query 410 AAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGN---L 463
A T V N +++T+YA LLPT DI A +TT+P Y LF + Q G+ L
Sbjct 491 TANT--TVTNAFTDVLATSYAKLLPTADIINAGLTTVPSYNLNLFLDGIEQAVDGDPIGL 548
Query 464 INAIGYPL 471
INAIGYP+
Sbjct 549 INAIGYPI 556
>gi|183981048|ref|YP_001849339.1| PPE family protein [Mycobacterium marinum M]
gi|183174374|gb|ACC39484.1| PPE family protein [Mycobacterium marinum M]
Length=661
Score = 369 bits (948), Expect = 6e-100, Method: Compositional matrix adjust.
Identities = 218/422 (52%), Positives = 277/422 (66%), Gaps = 32/422 (7%)
Query 85 FGPTGIPLPP---PSMLTPPIRCRSVRRAL-QAVFTPEELYPLTGVRSLVLNTSVEEGLT 140
G +GIP+P + RSV A+ QA+FTPE LYP+TGV++L +TSV G+
Sbjct 221 MGGSGIPMPSRRYVQLANSLYIGRSVGGAVAQALFTPEGLYPVTGVKNLTFDTSVARGVV 280
Query 141 ILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNP 200
IL AI ++ T GN VTVFG+SQSA I+SL M + A P+ L+F LVG+ NP
Sbjct 281 ILESAIREQI-TAGNNVTVFGYSQSATISSLTMTKLAASINP-PTPDQLSFTLVGDPNNP 338
Query 201 NGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVA 260
NGG+ RFP L+LP+L +T GATP D +YPT IYTLEYDG ADF RYPLN +S LNA+A
Sbjct 339 NGGVATRFPGLSLPSLGITASGATP-DNLYPTRIYTLEYDGVADFPRYPLNLVSTLNALA 397
Query 261 GITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLA 320
G +VHT YL LTPAQ++ A L + G T +TDYY+IRTE+ PLL+PLRA+PV+GDPLA
Sbjct 398 GAYYVHTDYLFLTPAQIDAAVHLTNTVGPT-MTDYYVIRTEDLPLLEPLRALPVLGDPLA 456
Query 321 DLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFT 380
DL+QPNLKVIVNLGYGDP YGYSTS +V TPFGLWP V P IADALAAGTQ+GI DF
Sbjct 457 DLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLWPEVSPLTIADALAAGTQQGIHDFG 516
Query 381 ADLQALS----------------AQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNTLARI 424
+ L A P T P + ++ + AA + +V NT+ +
Sbjct 517 YHISHLDLPQITNGSSSPVGNPQAAPTTGPAAPMVSINTIIDDLQAANS--QVANTITEV 574
Query 425 ISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGN---LINAIGYPLAATVGLG 478
+ +YA LLPT DIA A +T++P Y LF ++Q+A G+ +NA+GYPLAA V L
Sbjct 575 GAASYAALLPTADIANAAITSVPSYNINLFLDGIQQVANGDPMGFVNAVGYPLAADVALI 634
Query 479 TI 480
T+
Sbjct 635 TV 636
>gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=546
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 224/455 (50%), Positives = 278/455 (62%), Gaps = 39/455 (8%)
Query 31 RFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGI 90
+F Q LAAAAN+Y EA A+T A + + P F N T + TG
Sbjct 75 QFTQNLAAAANAYFGDEAISAATLVKG-ATTGLFTPTSPPVVPPAFGQN-TAIVMSGTGS 132
Query 91 PLP-------------PPSMLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEE 137
P+P PP M+ P+ T EELYP+TGV+SL SV+
Sbjct 133 PIPSIQYVAAITNLFLPPGMVVNPLN------------TIEELYPITGVKSLPFQNSVQT 180
Query 138 GLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNE 197
GL IL DA + E GN VTVFG+SQSA+I+SLE+Q+ ++G P S L+F+ +GNE
Sbjct 181 GLQIL-DAAIWEQIHAGNHVTVFGYSQSAVISSLEIQQLLSLGPNKPDPSQLSFIFIGNE 239
Query 198 MNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLN 257
MNPNGG+L+R P L + TL L FYGAT +D YPT YTLEYDGFADF RYPLN +SD+N
Sbjct 240 MNPNGGILSRIPGLNISTLGLPFYGAT-ADNPYPTTTYTLEYDGFADFPRYPLNVLSDIN 298
Query 258 AVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVT--DYYIIRTENRPLLQPLRAVPVI 315
AV GI VHT+Y LTP QV A LPT GVT Y+II T + PLL P+RA+PVI
Sbjct 299 AVFGIITVHTQYQYLTPQQVANAILLPTE----GVTSNQYFIIPTAHLPLLDPVRAIPVI 354
Query 316 GDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEG 375
G PLA LI+P+L+V+VNLGYGDP +GYSTS A+V TPFGL+P+VPP VI DAL AGT +G
Sbjct 355 GPPLAALIEPDLRVLVNLGYGDPRFGYSTSPANVPTPFGLFPDVPPGVIVDALVAGTHQG 414
Query 376 ILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAP---TPAEVVNTLARIISTNYAVL 432
I DF A L A LP I P + + P TPA + +T A ++S +Y++L
Sbjct 415 INDFAAALPAALNP-PELPVIGFPPYIQQILPPSPGPVPATPANIASTFAAVVSDSYSLL 473
Query 433 LPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAI 467
LPT D+ LA T LP Y LF+ QL GN I AI
Sbjct 474 LPTADLGLAFATILPAYDLSLFLNQLLHGNFIAAI 508
>gi|57116915|ref|YP_177839.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661606|ref|YP_001283129.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823014|ref|YP_001287768.1| PPE family protein [Mycobacterium tuberculosis F11]
43 more sequence titles
Length=655
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/400 (50%), Positives = 261/400 (66%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 309 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADAL AGTQ+GI DF D+ ++LP PAD + A
Sbjct 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 535
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 536 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 595
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 596 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
>gi|289443272|ref|ZP_06433016.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289447415|ref|ZP_06437159.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289750370|ref|ZP_06509748.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289753895|ref|ZP_06513273.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289416191|gb|EFD13431.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289420373|gb|EFD17574.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289690957|gb|EFD58386.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289694482|gb|EFD61911.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=655
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/400 (50%), Positives = 261/400 (66%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 309 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADAL AGTQ+GI DF D+ ++LP PAD + A
Sbjct 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 535
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 536 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 595
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 596 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
>gi|15841269|ref|NP_336306.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|254231984|ref|ZP_04925311.1| PPE family protein [Mycobacterium tuberculosis C]
gi|254364631|ref|ZP_04980677.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|13881497|gb|AAK46120.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|124601043|gb|EAY60053.1| PPE family protein [Mycobacterium tuberculosis C]
gi|134150145|gb|EBA42190.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323719678|gb|EGB28799.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=655
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/400 (50%), Positives = 261/400 (66%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 309 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADAL AGTQ+GI DF D+ ++LP PAD + A
Sbjct 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 535
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 536 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 595
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 596 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
>gi|307084416|ref|ZP_07493529.1| PE-PPE domain protein [Mycobacterium tuberculosis SUMu012]
gi|308365984|gb|EFP54835.1| PE-PPE domain protein [Mycobacterium tuberculosis SUMu012]
Length=542
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/400 (50%), Positives = 261/400 (66%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 137 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 195
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 196 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 253
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 254 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 312
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 313 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 372
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADAL AGTQ+GI DF D+ ++LP PAD + A
Sbjct 373 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 422
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 423 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 482
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 483 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 522
>gi|31792988|ref|NP_855481.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618579|emb|CAD94531.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=655
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/400 (50%), Positives = 261/400 (66%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+ TP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 250 QALVTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 309 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADALAAGTQ+GI DF D+ ++LP PAD + A
Sbjct 486 PFGLFPEVSPVVIADALAAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 535
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 536 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 595
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 596 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
>gi|121637701|ref|YP_977924.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990185|ref|YP_002644872.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493348|emb|CAL71819.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773298|dbj|BAH26104.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601728|emb|CCC64401.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=655
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 198/400 (50%), Positives = 261/400 (66%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+ TP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 250 QALVTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 309 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYI+RTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 426 MTQYYIVRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADALAAGTQ+GI DF D+ ++LP PAD + A
Sbjct 486 PFGLFPEVSPVVIADALAAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 535
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 536 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 595
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 596 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
>gi|289574477|ref|ZP_06454704.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339631854|ref|YP_004723496.1| PPE family protein [Mycobacterium africanum GM041182]
gi|289538908|gb|EFD43486.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339331210|emb|CCC26892.1| PPE family protein [Mycobacterium africanum GM041182]
Length=655
Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 198/400 (50%), Positives = 260/400 (65%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+ TP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 250 QALVTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 309 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADAL AGTQ+GI DF D+ ++LP PAD + A
Sbjct 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 535
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 536 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 595
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 596 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
>gi|289569870|ref|ZP_06450097.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289543624|gb|EFD47272.1| PPE family protein [Mycobacterium tuberculosis T17]
Length=558
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 198/400 (50%), Positives = 260/400 (65%), Gaps = 40/400 (10%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 153 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 211
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 212 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 269
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 270 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 328
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 329 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 388
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PF L+P V P VIADAL AGTQ+GI DF D+ ++LP PAD + A
Sbjct 389 PFRLFPEVSPVVIADALVAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 438
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 439 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 498
Query 452 QLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRR 485
LF ++Q G+ L+NA+GYPLAA V L T G +
Sbjct 499 HLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQ 538
>gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacterium marinum M]
gi|183177617|gb|ACC42727.1| PE family protein [Mycobacterium marinum M]
Length=588
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 235/521 (46%), Positives = 304/521 (59%), Gaps = 57/521 (10%)
Query 15 ARNTRPCSLKSRRFTVRFHQTLAAAANSYA-------DAEAAIASTRQNQLAVPAAAPTP 67
A+ + S ++ F F QTL AA++SY A A + N A + P
Sbjct 59 AQGYQAVSRQAAAFHDAFAQTLFAASDSYVRAEAAAVKALAGLTEPVANLFAPVLSGPES 118
Query 68 AAAAMIP-----PFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVR------RALQAVFT 116
AA+ P L +G+P P S ++ + + V A Q V T
Sbjct 119 VAASATALLSGAPLKPVEAALILSESGVPTPSASYISD-VYTKYVEPNFPSATAPQGVST 177
Query 117 PEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELAT--TGNAVTVFGWSQSAIIASLEMQ 174
P LYP TG++ L L+ S+ G TIL+DAI+ +LA G++V V G+SQSA+++SL M
Sbjct 178 PNGLYPFTGIKDLTLDISLARGATILNDAILQQLAALPAGSSVAVLGYSQSAVLSSLVMP 237
Query 175 RFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAI 234
+ A G ++S +NFVL+GN MNPNGG+LARFPDLTLP+L TFYGATP D +PT
Sbjct 238 KLLAEG---VTSSQVNFVLLGNPMNPNGGVLARFPDLTLPSLGFTFYGATP-DNAFPTVS 293
Query 235 YTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTD 294
YTLEYDGFADF RYP+N ++D+NAV GI FVH Y LT AQ++ A +LPT G T T
Sbjct 294 YTLEYDGFADFPRYPINLLADINAVMGIPFVHADYQHLTQAQLDSAVQLPTE-GPTQST- 351
Query 295 YYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFG 354
YY+I TE+ PLL PLR +P +GDPLA+L++PNL+V+VNLGYGDP YGY T A+V TPFG
Sbjct 352 YYMIPTEHLPLLAPLRFIPYVGDPLAELLEPNLRVLVNLGYGDPAYGYDTGPANVPTPFG 411
Query 355 LWPNVPPQVIADALAAGTQEGILDFTADLQA--------------LSAQPLTLPQIQLP- 399
L+P V P +A+ LAAGTQ+GI++ A LQA L+A P LP
Sbjct 412 LFPPVSPLTVAEHLAAGTQQGIVNSGAALQAQGPPSIPLSDIAHTLTANPPWAGTPALPP 471
Query 400 --QPA----DLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQL 453
PA D + AV AA + + + +ST YA LLPT DIA LV TLP Y L
Sbjct 472 STSPASSIEDFILAVQAANS--SISRGFVKTLSTAYATLLPTTDIASELVFTLPSYNLNL 529
Query 454 F---VRQLAAGN----LINAIGYPLAATVGLGTIDSGRRGI 487
F V Q G LINAIG P+AA+ GL T+ G + I
Sbjct 530 FLDGVIQAINGQPIEGLINAIGNPIAASTGLITLAGGFQLI 570
>gi|333989608|ref|YP_004522222.1| PE family protein [Mycobacterium sp. JDM601]
gi|333485576|gb|AEF34968.1| PE family protein [Mycobacterium sp. JDM601]
Length=490
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/455 (46%), Positives = 279/455 (62%), Gaps = 44/455 (9%)
Query 61 PAAAPTPAAAAMIPPFPANL---TTLFFGPTGIPLPPPSML-----------TPPIRCRS 106
PA AP A+ A A L + G +G+P+PPP L TP +
Sbjct 26 PAVAPGLASTAKTVVAQATLLDTQSWIMGGSGLPVPPPQYLAALTDRFLDPATPKFAGQP 85
Query 107 VR--RALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQ 164
+ A+FTPE LYPLTGV+SL L+TS+++G+ ILH IM E A GN + V G+SQ
Sbjct 86 LFPVDVTNALFTPEGLYPLTGVKSLPLDTSLDQGVEILHQKIMQETAD-GNDLVVLGYSQ 144
Query 165 SAIIASLEMQRFTAM-GGAAPSASDLNFVLVGNEMNPNGGMLARF---------PDLTLP 214
S +I +LE+++ +M P A L+FV++G+ P+GG+L+RF P+L+LP
Sbjct 145 SGVINALEIKQLLSMPEDERPDADQLSFVMLGSPSTPDGGLLSRFDLTSLNPNLPELSLP 204
Query 215 TLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTP 274
+L +TF G TP+DT + TA YT EYDGFADF +YPLN ++D+NA GI FVH Y LT
Sbjct 205 SLGVTFSGGTPADTPWETAFYTQEYDGFADFPKYPLNLLADINAFMGIMFVHGTYPTLTD 264
Query 275 AQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLG 334
Q+ A +LP S GYTG T Y++I TEN PLL+PLR G+ +ADL+QP+L+V+VNLG
Sbjct 265 EQLASAIELPVSDGYTGNTQYFMIPTENLPLLEPLRGSG-FGNAIADLLQPSLRVLVNLG 323
Query 335 YGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLP 394
YGD +G+S ADV TPFGL+P+V Q + AL G Q+G DF LQ +S+
Sbjct 324 YGDIEHGWSQGPADVSTPFGLFPDVNMQDVFTALVNGAQQGWTDFVDALQNMSSS----- 378
Query 395 QIQLPQPADLV------AAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPL 448
ADL +A P+ ++VNTL +T YA LLPT DI ALVTTLP
Sbjct 379 -----SAADLFGGDVLGSADFVMPSLTDIVNTLTSASATLYATLLPTADILNALVTTLPA 433
Query 449 YTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDSG 483
YT +F ++LA+G+L+NAIG PLAAT GL T+ +G
Sbjct 434 YTATIFAQELASGDLLNAIGLPLAATTGLVTMAAG 468
>gi|183981512|ref|YP_001849803.1| PPE family protein, PPE28 [Mycobacterium marinum M]
gi|183174838|gb|ACC39948.1| PPE family protein, PPE28 [Mycobacterium marinum M]
Length=660
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 211/439 (49%), Positives = 272/439 (62%), Gaps = 47/439 (10%)
Query 82 TLFFGPTGIPLPPPS--------MLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNT 133
TL G +G P+P S +TP +V A+ ++FTP E Y +TG++++ +
Sbjct 214 TLVIGGSGFPIPSQSYVDNVVNNFVTPNFPSFTVSNAI-SLFTPAESYWITGIKTMTEDA 272
Query 134 SVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVL 193
S EGLTIL AI +LA GN V V G+SQ A IASLEM A G P+ S ++F L
Sbjct 273 SWAEGLTILDTAIKAQLAA-GNNVVVQGYSQGAGIASLEMSNLKAAG--VPTGS-VSFSL 328
Query 194 VGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFI 253
+GN MNPNGG+ RF L P+L TF+GATP D Y T +YTLEYDGFADF RYPLNF+
Sbjct 329 IGNAMNPNGGLYERFAGLVSPSLGKTFWGATP-DNYYTTDVYTLEYDGFADFPRYPLNFV 387
Query 254 SDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVP 313
SDLNA+ GI +VHT+Y LT AQV A LPT G T +T Y++I TEN PLL+PLR VP
Sbjct 388 SDLNAIMGIYYVHTQYPTLTAAQVATAFTLPTE-GAT-MTTYHMIPTENLPLLEPLRGVP 445
Query 314 VIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQ 373
IG+ LADL+QP+LKV+VNLGYGDPNYGYST A+V TPFGL+P+V P + DAL AGTQ
Sbjct 446 FIGNTLADLVQPDLKVLVNLGYGDPNYGYSTGPANVPTPFGLFPDVAPATVFDALVAGTQ 505
Query 374 EGILDFTADL-----------------QALSAQPL------TLPQIQLPQPADLVAAVAA 410
+GI D AD+ AL + P TLP + + + + V
Sbjct 506 QGISDAAADIGAWQLPSLPDISLSGISNALGSDPWSALSNATLPTLSVSTIENAIKGVQT 565
Query 411 APTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGN---LI 464
A T ++ NT++ +T YA LLPT D+ A+VTTLP Y +LF + Q+ G+ LI
Sbjct 566 ATT--DIANTISFDATTAYATLLPTADVVNAMVTTLPAYNLKLFLDGILQVLDGDPAGLI 623
Query 465 NAIGYPLAATVGLGTIDSG 483
A+G P+AA L T+ +G
Sbjct 624 YALGAPIAADTALVTLLAG 642
>gi|118617931|ref|YP_906263.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570041|gb|ABL04792.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=637
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/439 (48%), Positives = 271/439 (62%), Gaps = 47/439 (10%)
Query 82 TLFFGPTGIPLPPPS--------MLTPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNT 133
TL G +G P+P S +TP +V A+ ++FTP E Y +TG++++ +
Sbjct 191 TLVIGGSGFPIPSQSYVDNVVNNFVTPNFPSFTVSNAI-SLFTPAESYWITGIKTMTEDA 249
Query 134 SVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVL 193
S EGLTIL AI +LA GN V V G+SQ A IASLEM A G P+ S ++F L
Sbjct 250 SWAEGLTILDTAIKAQLAA-GNNVVVQGYSQGAGIASLEMSNLKAAG--VPTGS-VSFSL 305
Query 194 VGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFI 253
+GN MNPNGG+ RF L P+L TF+GATP D Y T +YTLEYDGFADF RYP NF+
Sbjct 306 IGNAMNPNGGLYERFAGLVSPSLGKTFWGATP-DNYYTTDVYTLEYDGFADFPRYPPNFV 364
Query 254 SDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVP 313
SDLNA+ GI +VHT+Y LT AQV A LPT G T +T Y++I TEN PLL+PLR VP
Sbjct 365 SDLNAIMGIYYVHTQYPTLTAAQVATAFTLPTE-GAT-MTTYHMIPTENLPLLEPLRGVP 422
Query 314 VIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQ 373
IG+ LADL+QP+LKV+VNLGYGDPNYGYST A+V TPFGL+P+V P + DAL AGTQ
Sbjct 423 FIGNTLADLVQPDLKVLVNLGYGDPNYGYSTGPANVPTPFGLFPDVAPATVFDALVAGTQ 482
Query 374 EGILDFTADL-----------------QALSAQPL------TLPQIQLPQPADLVAAVAA 410
+GI D AD+ AL + P TLP + + + + V
Sbjct 483 QGISDAAADIGAWQLPSLPDISLSGISNALGSDPWSALSNATLPTLSVSTIENAIKGVQT 542
Query 411 APTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGN---LI 464
A T ++ NT++ +T YA LLPT D+ A+VTTLP Y +LF + Q+ G+ LI
Sbjct 543 ATT--DIANTISFDATTAYATLLPTADVVNAMVTTLPAYNLKLFLDGILQVLDGDPAGLI 600
Query 465 NAIGYPLAATVGLGTIDSG 483
A+G P+AA L T+ +G
Sbjct 601 YALGAPIAADTALVTLLAG 619
>gi|308231943|ref|ZP_07663959.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308215534|gb|EFO74933.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=611
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/365 (51%), Positives = 241/365 (67%), Gaps = 34/365 (9%)
Query 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 225 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 283
Query 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 284 VMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 341
Query 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 342 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 400
Query 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 401 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 460
Query 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAA 411
PFGL+P V P VIADAL AGTQ+GI DF D+ ++LP PAD + A
Sbjct 461 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVS----------HLELPLPADGSTMPSTA 510
Query 412 P---TPA-----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTT 451
P TP + NT++++ +T+YA +LPT DIA A +T +P Y
Sbjct 511 PGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNI 570
Query 452 QLFVR 456
LF R
Sbjct 571 HLFWR 575
>gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacterium marinum M]
gi|183173726|gb|ACC38836.1| PE family protein [Mycobacterium marinum M]
Length=589
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 199/426 (47%), Positives = 259/426 (61%), Gaps = 46/426 (10%)
Query 83 LFFGPTGIPLPPPSML---TPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGL 139
L G +G P+PPP L P I + L + TPE LYPLT ++ L LNTSV G+
Sbjct 140 LIMGGSGTPIPPPDYLQDVAPYIPGMPTQ--LLPLNTPEGLYPLTAIKDLPLNTSVANGV 197
Query 140 TILHDAIM--VELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNE 197
IL +A+ L T GN V V G+SQSA+++SLEM+ A+G +P+ +L F L+GN
Sbjct 198 QILDNALFGPQGLITLGNNVNVLGYSQSAVVSSLEMRNLQALG--SPNTDNLAFTLLGNP 255
Query 198 MNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLN 257
M PNGG+L+RFP L+LP L L FYG TPS+T Y YTL YDG+ADF +YPLN ++DLN
Sbjct 256 MAPNGGLLSRFPGLSLPALGLDFYGGTPSNTGYELNQYTLLYDGYADFPQYPLNLLADLN 315
Query 258 AVAGITFVHTKYLDLTPAQVEGA---TKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPV 314
A AGI FVH Y DL P + +LP SPG G+ +YY+I P+L+PLRA+PV
Sbjct 316 AFAGIQFVHGDYPDLDPNNLPAGYNLVQLPVSPGNNGLENYYMITYPGLPILEPLRAIPV 375
Query 315 IGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQE 374
IG+PLADL++PNL +VNLGYGDPNYGYST YADV TPFGL P + P A A+ GTQ+
Sbjct 376 IGNPLADLVEPNLTYLVNLGYGDPNYGYSTGYADVTTPFGLLPPIDPVDFAGAMVNGTQQ 435
Query 375 GILDFTADLQALSAQPLTLPQIQLPQ---------PADL--------------VAAVAAA 411
G+ F D+ A+ P TLP + LP P+ L + A+ AA
Sbjct 436 GVTAFVNDISAI---PATLPSLSLPDFSQTGGSSVPSTLPAVPTVTNASINGFIDALQAA 492
Query 412 PTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGN---LIN 465
T + N + + + YA LLPT DI ++TT+P Y LF ++Q G+ LIN
Sbjct 493 NT--NIANAITNVSADTYAALLPTADIINTVLTTVPSYNVNLFLDGIQQFVNGDPVGLIN 550
Query 466 AIGYPL 471
AIGYP+
Sbjct 551 AIGYPI 556
>gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacterium marinum M]
gi|183176777|gb|ACC41887.1| PE family protein [Mycobacterium marinum M]
Length=575
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 215/491 (44%), Positives = 286/491 (59%), Gaps = 42/491 (8%)
Query 32 FHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIP 91
F QTL A+AN+Y AEA + A AP+ A F G +G P
Sbjct 76 FVQTLTASANAYGHAEADAQALLSGSTAASGGAPSAQATLQGTTF-----GWMIGGSGNP 130
Query 92 LPPPSMLTPPIRCRSVRRAL-----QAVFTPEELYPL-TGVRSLVLNTSVEEGLTILHDA 145
+P + + + + + +A+FTPE L P+ TG++SL LNTSV++G+ IL
Sbjct 131 IPSQTYVNKVLPYVNEAFGVLPENAKALFTPEGLQPIYTGIKSLPLNTSVDQGVQILDQT 190
Query 146 IMVELATT-GNAVTVFGWSQSAIIASLEMQRFT--AMGGAAPSASDLNFVLVGNEMNPNG 202
I LA G++V V G+SQSAII+SLEM+ A+ P ++L F L+GN MNPNG
Sbjct 191 IKSTLAAHPGDSVAVLGYSQSAIISSLEMRDLMNPALNPTPPLPTELGFTLLGNPMNPNG 250
Query 203 GMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGI 262
G+L+RF L +P+L L FYG+TP DT YPT IYTL+YDGFA F RYPLN +SDLNA GI
Sbjct 251 GLLSRFVGLNVPSLGLDFYGSTPPDTPYPTNIYTLQYDGFASFPRYPLNLLSDLNAFLGI 310
Query 263 TFVHTKYLDLTPAQVEGATKLPTSPGYT-----GVTDYYIIRTENRPLLQPLRAVPVIGD 317
+H +Y DL PA + ++ T PG G T+YY+I N P+ PLRA+PVIGD
Sbjct 311 QTIHGQYPDLDPANLPPGYEMVTLPGSASLTGQGQTNYYMITHPNLPITAPLRAIPVIGD 370
Query 318 PLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGIL 377
PLADLI+PN++++VNLGYGDPNYGYSTS A+V TPFGL+P+V +A LA GTQ+G
Sbjct 371 PLADLIEPNMRILVNLGYGDPNYGYSTSPANVPTPFGLFPDVNYLEVAGMLADGTQQGGN 430
Query 378 DFTADLQALSAQPLTLPQIQLPQPADLVAA----VAAAPTPAE------------VVNTL 421
F AD+ A++ LP A +AAAPT A + N++
Sbjct 431 AFIADISAMAPSFADLPTSFASAMGSAGTAGSGLLAAAPTSANEVIRALQDANTAIANSI 490
Query 422 ARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGNLINAIGY----PLAAT 474
A S YAVLLPT DIA LVT++P Y LF + Q+ G+ + + Y PLAA
Sbjct 491 ANASSNAYAVLLPTADIANMLVTSMPAYDINLFLDGIEQIVDGDPLGGLTYALVAPLAAN 550
Query 475 VGLGTIDSGRR 485
+ T+ SG +
Sbjct 551 TAIVTLASGFQ 561
>gi|118616727|ref|YP_905059.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118568837|gb|ABL03588.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=547
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 217/482 (46%), Positives = 283/482 (59%), Gaps = 50/482 (10%)
Query 15 ARNTRPCSLKSRRFTVRFHQTLAAAANSYA-------DAEAAIASTRQNQLAVPAAAPTP 67
A+ + S ++ F F QTL AA++SY A A + N A + P
Sbjct 61 AQGYQAVSRQTAAFHDAFAQTLFAASDSYVRAEAAAVKALAGLTEPVANLFAPVLSGPES 120
Query 68 AAAAMIP-----PFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVR------RALQAVFT 116
AA+ P L +G+P P S ++ + + V A Q V T
Sbjct 121 VAASATALLSGAPLKPVEAALILSESGVPTPSASYISD-VYTKYVEPNFPSATAPQGVST 179
Query 117 PEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELAT--TGNAVTVFGWSQSAIIASLEMQ 174
P LYP TG++ L L+ S+ G TIL+DAI+ +LA G++V V G+SQSA+++S M
Sbjct 180 PNGLYPFTGIKDLSLDISLARGATILNDAILQQLAALPAGSSVAVLGYSQSAVLSSRVMP 239
Query 175 RFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAI 234
+ A G ++S +NFVL+GN MNPNGG+LARFPDLTLP+L TFYGATP D +PT
Sbjct 240 KLLAEGV---TSSQVNFVLLGNPMNPNGGVLARFPDLTLPSLGFTFYGATP-DNAFPTVS 295
Query 235 YTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTD 294
YTLEYDGFADF RYP+N ++D+NAV GI FVH Y DLT AQ++ A +LPT G T T
Sbjct 296 YTLEYDGFADFPRYPINLLADINAVMGIPFVHADYQDLTQAQLDSAVQLPTE-GPTQST- 353
Query 295 YYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFG 354
YY+I TE+ PLL PLR +P +GDPLA+L++PNL+V+VN GYGDP YGY T A+V TPFG
Sbjct 354 YYMIPTEHLPLLAPLRFIPYVGDPLAELLEPNLRVLVNFGYGDPAYGYDTGPANVPTPFG 413
Query 355 LWPNVPPQVIADALAAGTQEGILDFTADLQA--------------LSAQPLTLPQIQLP- 399
L+P V P +A+ LAAGTQ+GI++ A LQA L+A P LP
Sbjct 414 LFPPVSPLTVAEHLAAGTQQGIVNSGAALQAQGPPSIPLSDIAHTLTANPPWAGTPALPP 473
Query 400 --QPA----DLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQL 453
PA D + AV AA + + + +ST YA LLPT DIA LV TLP Y L
Sbjct 474 STSPASSIEDFILAVQAANS--SISRGFVKTLSTAYATLLPTTDIASELVFTLPSYNLNL 531
Query 454 FV 455
F+
Sbjct 532 FL 533
>gi|240168156|ref|ZP_04746815.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=618
Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/406 (45%), Positives = 248/406 (62%), Gaps = 40/406 (9%)
Query 116 TPEELYPLTGVRSLVLNTSVEEGLTILHDAIM--VELATTGNAVTVFGWSQSAIIASLEM 173
TPE LYPLT ++ L L SV G+ ILHDA+ + T G V V G+SQSAI++S+EM
Sbjct 202 TPEGLYPLTQIKDLPLTQSVTTGVQILHDALFGPQGMITAGGNVAVLGYSQSAILSSMEM 261
Query 174 QRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTA 233
++ G +P+ ++L+F L+GN M PNGG+L+RFP L++P + L FYGATPS++ Y +
Sbjct 262 RQLILQG--SPNTANLSFTLLGNPMAPNGGLLSRFPGLSMPAMGLEFYGATPSNSGYQLS 319
Query 234 IYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQV---EGATKLPTSPGYT 290
YTL+YDGFADF RYP+NF++DLNA GI FVHT Y L P + +LP SP
Sbjct 320 QYTLQYDGFADFPRYPINFLADLNAFMGIQFVHTDYSYLDPNNLPPGYNLVELPVSPANN 379
Query 291 GVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVR 350
G+ YY+I PLL+PLRA+PVIGDPLADL++PNL +VNLGYGDP++GYST YADV
Sbjct 380 GLEHYYMITYPGLPLLEPLRALPVIGDPLADLVEPNLTYLVNLGYGDPHFGYSTGYADVP 439
Query 351 TPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP----------- 399
T FGL+P++ P A + Q+G+ F D+ A+ P +LP LP
Sbjct 440 TRFGLFPSIDPVTFAGDMVGAAQQGVNAFAGDIGAM--LPTSLPDFSLPAAALTGGSPTA 497
Query 400 -----------QPAD-LVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLP 447
P D ++ + AA T + N ++ + YA+ LPT DI L T +P
Sbjct 498 WALPTLPAPTGSPIDGIIDTLKAANT--HITNAISSAAADTYAMALPTADIVNTLATKVP 555
Query 448 LYTTQLF---VRQLAAGN---LINAIGYPLAATVGLGTIDSGRRGI 487
Y LF +++LA G+ L+NA GYP+AA V L T+ G + I
Sbjct 556 SYNVNLFLDGIQELANGDPAGLVNAFGYPVAADVALLTLAGGFQTI 601
>gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=584
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 214/523 (41%), Positives = 290/523 (56%), Gaps = 79/523 (15%)
Query 24 KSRRFTVRFHQTLAAAANSYA-----------DAEAAIASTRQNQL--AVPAAAPTPAAA 70
++ F F Q+LA AA SYA +A AAI+S + L A P + P+AA
Sbjct 68 QAGAFHDAFAQSLATAATSYAQAEAANAATVTEALAAISSPVRAMLGGAAPLTSAVPSAA 127
Query 71 AMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRCRSVR-------RALQAVFTPEELYPL 123
A + TL G +G P+P + I R + +Q++FTPE Y
Sbjct 128 A--------VNTLVMGGSGNPIPSIDFVNN-IVSRYIAPFFPVDPNFVQSLFTPEGFYID 178
Query 124 TGVRSLVLNTSVEEGLTILHDAIM------VELATTGNAVTVFGWSQSAIIASLEMQRF- 176
TG+++L LN SV +G+TIL + ++ L T+GN V V G SQSA+IASL M+
Sbjct 179 TGIKTLPLNVSVAQGVTILTNTLVGTNPPYAGLLTSGNTVNVSGESQSAMIASLVMRSLN 238
Query 177 -TAMGGA-APSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAI 234
T G A +P ++LNF LVGN MNPNGG+ RF L+LP+L + YGATP D +PT I
Sbjct 239 PTNSGAAGSPYFNNLNFSLVGNPMNPNGGLFERFVGLSLPSLGIEMYGATP-DNAFPTKI 297
Query 235 YTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTD 294
+T+EYDG ADF RYP+N ++DLNA GI +H +Y LTP Q+ A L + G T T
Sbjct 298 FTIEYDGAADFPRYPINVLADLNAFMGIQSLHGQYATLTPEQLATAIPLTNTVGPTS-TS 356
Query 295 YYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFG 354
YY+I T+N PLL P+RA+P +G P+ADL+QPNL+ +VN GYGDP YG+STS +V TPFG
Sbjct 357 YYMIPTQNLPLLDPVRAIPFVGKPIADLVQPNLRYLVNWGYGDPAYGWSTSPPNVPTPFG 416
Query 355 LWPNVPPQV-IADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPT 413
+ P + + LA GTQ+GI F D+ A A T P + PA L + AA +
Sbjct 417 VLPPLSATTSLPGYLAIGTQQGISAFMNDISAGIA---TFPDL----PALLATPLGAAGS 469
Query 414 PA------------------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLY 449
P+ V N + R + YA LLPT DIA A++TT+P Y
Sbjct 470 PSLLSGLSPAAFSPTDFIHFLQSTNTTVTNFITRTAANTYAALLPTADIANAILTTVPSY 529
Query 450 TTQLFVRQLA-------AGNLINAIGYPLAATVGLGTIDSGRR 485
LF+ L AG L+ A G P+AA + LGT+ +G +
Sbjct 530 NVNLFLSGLEQALNGDPAGGLVYAFGAPIAADIALGTLLAGFQ 572
>gi|240168595|ref|ZP_04747254.1| PPE family protein, PPE28 [Mycobacterium kansasii ATCC 12478]
Length=641
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/427 (46%), Positives = 262/427 (62%), Gaps = 37/427 (8%)
Query 82 TLFFGPTGIPLPPPSML--------TPPIRCRSVRRALQAVFTPEELYPLTGVRSLVLNT 133
TL G +G P+P S + TP + A Q+++TP + Y +TGV++L +
Sbjct 204 TLVIGGSGYPIPSQSYVNTVVADYVTPTFPGFTTANA-QSLYTPAQSYWITGVKTLTEDA 262
Query 134 SVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVL 193
S +GLTIL +AI +LAT GN V V G+SQ A IASLEM A G P++S ++F L
Sbjct 263 SWAQGLTILDNAIHAQLAT-GNNVAVQGFSQGAGIASLEMANLKAEG--VPTSS-VSFSL 318
Query 194 VGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFI 253
+G+ MNPNGG+ +RF LTL ++ +F G+TP++ YPT IYT+EYDGFADF +YPLN +
Sbjct 319 IGDPMNPNGGLYSRFDGLTLASMGKSFPGSTPAND-YPTVIYTIEYDGFADFPQYPLNLV 377
Query 254 SDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVP 313
+D NA+ G +VH +Y LTPAQV A +LPT T T YY+I T+N PLL+PLRA+P
Sbjct 378 ADANAMLGALYVHPQYPVLTPAQVVTAVQLPTQGPTT--TTYYMIPTQNLPLLEPLRALP 435
Query 314 VIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQ 373
+G+ +ADLIQP+LKVIVNLGYG+P+YGYST A+V TPFGL+P+ P V+ L GT+
Sbjct 436 -LGNTVADLIQPDLKVIVNLGYGNPDYGYSTGPANVPTPFGLFPDASPGVVVADLIDGTR 494
Query 374 EGILDFTADLQALSA-------QPLTLPQIQLPQPA-----DLVAAVAAAPTPAEVVNTL 421
+GI ADL A P L + P A ++ + T + N +
Sbjct 495 QGIGAAAADLGTWHAPAGNPAPNPFALSDLTPPTVAATTIDGIIQGLQTGNT--NLTNAV 552
Query 422 ARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQLAAGN---LINAIGYPLAATV 475
S+ YA LLPT D+ A++ +LP Y LF VRQ G+ +INAIGYP+AA
Sbjct 553 TSATSSAYATLLPTADMLSAILVSLPSYDVNLFLDGVRQALDGDPAGIINAIGYPIAADT 612
Query 476 GLGTIDS 482
GL T S
Sbjct 613 GLLTFLS 619
>gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacterium marinum M]
gi|183177282|gb|ACC42392.1| PPE family protein [Mycobacterium marinum M]
Length=594
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 211/515 (41%), Positives = 286/515 (56%), Gaps = 61/515 (11%)
Query 28 FTVRFHQTLAAAANSYADAEAAIASTRQN---QLAVPAAAPTPAAAAMIPPFPAN----- 79
F F TLAAA + Y AEAA +T L+ P A AA A
Sbjct 72 FHDHFAATLAAAGSVYTQAEAAGTATLSQALTTLSSPIRALLGGTAASTSGAMAAAAPMA 131
Query 80 -----LTTLFFGPTGIPLPPPSMLTPPIR-----CRSVRRAL-QAVFTPEELYPLTGVRS 128
+ TL G +G P+P P+ ++ + V AL Q +FTP + Y TG+++
Sbjct 132 AAGDPIYTLVVGGSGNPIPSPAYISNVVSKFVAPYFPVDPALVQGLFTPAQFYIDTGIKT 191
Query 129 LVLNTSVEEGLTILHDAIM------VELATTGNAVTVFGWSQSAIIASLEMQRF--TAMG 180
L LN SV +G+ IL + ++ + L T+GN V V G SQSA+IASL M+ T G
Sbjct 192 LPLNVSVPQGVAILTNTLVGTNPPYLGLLTSGNTVNVTGDSQSAMIASLVMRALNPTNSG 251
Query 181 GA-APSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEY 239
A +P DL F L GN MNPNGG+ ARFP L+LP++ L FYG+TP D +PT ++TLEY
Sbjct 252 AAGSPYFDDLTFSLFGNPMNPNGGLFARFPGLSLPSMGLDFYGSTP-DNSFPTNVFTLEY 310
Query 240 DGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIR 299
DG ADF RYP+NF++DLNA GI +H +Y LTP Q++ A L + G T T+YY+I
Sbjct 311 DGAADFPRYPINFLADLNAFLGIQSLHGQYPSLTPEQLDTAIPLTNTVGPTS-TNYYMIP 369
Query 300 TENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNV 359
+ + PLL P+RA+PVIG P+ADLI+P+L+ +VN GYGDP YG+STS +V TPFG+ P
Sbjct 370 SPHLPLLDPVRAIPVIGTPIADLIEPDLRYLVNWGYGDPAYGWSTSPPNVPTPFGVLP-- 427
Query 360 PPQV---IADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAA---VAAAPT 413
P Q + LA GTQ+G+ F +D+ A + LP L P A + A +
Sbjct 428 PLQATTSLPGYLAIGTQQGVNAFVSDINAEISAYSNLPSTLLSAPLGASGAGGTLLAGLS 487
Query 414 PA----------------EVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQ 457
PA +VN ++ + YA LLPT DIA ALVT++P Y LF+
Sbjct 488 PATFSPNDFIHFLQSANTTIVNDISNTAANTYAFLLPTADIANALVTSVPSYDLNLFLSG 547
Query 458 LA-------AGNLINAIGYPLAATVGLGTIDSGRR 485
+ AG L+ A G P+AA + LGT+ G
Sbjct 548 IEQAINGDPAGGLVYAFGAPIAANIALGTLAGGFE 582
>gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobacterium marinum M]
gi|183173741|gb|ACC38851.1| PE family protein, PE4 [Mycobacterium marinum M]
Length=505
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/282 (50%), Positives = 186/282 (66%), Gaps = 13/282 (4%)
Query 80 LTTLFFGPTGIPLPPPSMLTPPIRCRSVRRAL-----QAVFTPEELYPLT-GVRSLVLNT 133
+ L G T +PLP P ++ I ++ QA+FTPE+ +P+T G+ +L N
Sbjct 145 VVALIMGGTSVPLPGPGYVSD-INNNYIQPLFSGAIPQALFTPEQFWPVTPGLGNLTFNQ 203
Query 134 SVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVL 193
SV +G+T+L+DAI +LA GN V FG+SQSA I + E+ AMG AP DL+F++
Sbjct 204 SVAQGVTLLNDAINTQLAL-GNKVVAFGYSQSATIVNNEILALMAMGTGAPDPGDLSFIM 262
Query 194 VGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFI 253
VG NP+GG+LARFP +P LD++F GATP+ YPT+I+T +YDG A +YPLN +
Sbjct 263 VGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAANPYPTSIFTAQYDGIAHAPQYPLNIL 322
Query 254 SDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVP 313
SD+NA+ G +VH Y DL Q A +LPTSPGYTG TDYY+ T++ PL+QP+R +P
Sbjct 323 SDINAIMGYFYVHGNYPDLMSGQ---AIQLPTSPGYTGNTDYYMYLTQDLPLVQPIRDIP 379
Query 314 VIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGL 355
G PLADLIQP L+V+V+LGY D YG SYADV TP GL
Sbjct 380 YAGPPLADLIQPQLRVLVDLGYSD--YGPGLSYADVPTPAGL 419
>gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=495
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/300 (48%), Positives = 194/300 (65%), Gaps = 10/300 (3%)
Query 80 LTTLFFGPTGIPLPPPSMLTPP----IRCRSVRRALQAVFTPEELYPLTGVRSLVLNTSV 135
LT L G T PLP P+ +T I+ R Q +FTPE+ +P+TG +L SV
Sbjct 141 LTALIMGGTDNPLPDPAYVTAINNAYIQPRFPGAVPQGLFTPEQFWPITG--TLTFGQSV 198
Query 136 EEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVG 195
+G+T+L+ I ++ T GN+V VFG+SQSA IA+ E+ A G AP L+FVL
Sbjct 199 AQGVTLLNSEIDHQINTLGNSVVVFGYSQSAAIATNEINALMAAG--APYTGQLSFVLAS 256
Query 196 NEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISD 255
N NP+GG+LARFP +P LD+ F GATP ++ YPT++YT++Y+G A+ +YPL+ +SD
Sbjct 257 NPNNPDGGILARFPGFYIPFLDVPFTGATPPNSPYPTSMYTIQYEGVANAPQYPLHVLSD 316
Query 256 LNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVI 315
+NAV G ++H Y LT AQV GA LPTSPGYTG T YY++ T+N PL+QP+R +P +
Sbjct 317 VNAVMGYFYLHDTYQHLTAAQVGGALPLPTSPGYTGNTQYYMLLTQNLPLVQPIRDIPYL 376
Query 316 GDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEG 375
G PLADLIQP+L+V+V+LGYG N G YA+V TP L + P + LA G +G
Sbjct 377 GPPLADLIQPDLRVLVDLGYG--NIGVGADYANVPTPARLVQLIDPFSVGFNLAKGAVQG 434
>gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118568885|gb|ABL03636.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=505
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/282 (49%), Positives = 185/282 (66%), Gaps = 13/282 (4%)
Query 80 LTTLFFGPTGIPLPPPSMLTPPIRCRSVRRAL-----QAVFTPEELYPLT-GVRSLVLNT 133
+ L G T +PLP P ++ I ++ QA+FTPE+ +P+T G+ +L N
Sbjct 145 VVALIMGGTSVPLPGPGYVSD-INNNYIQPLFSGAIPQALFTPEQFWPVTPGLGNLTFNQ 203
Query 134 SVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVL 193
SV +G+T+L+DAI +LA GN V FG+SQSA I + E+ AMG AP DL+F++
Sbjct 204 SVAQGVTLLNDAINTQLAL-GNKVVAFGYSQSATIVNNEILALMAMGTGAPDPGDLSFIM 262
Query 194 VGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFI 253
VG NP+GG+LARFP +P LD++F GATP+ YPT+I+T +YDG A +Y LN +
Sbjct 263 VGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAANPYPTSIFTAQYDGIAHAPQYRLNIL 322
Query 254 SDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVP 313
SD+NA+ G +VH Y DL Q A +LPTSPGYTG TDYY+ T++ PL+QP+R +P
Sbjct 323 SDINAIMGYFYVHGNYPDLMSGQ---AIQLPTSPGYTGNTDYYMYLTQDLPLVQPIRDIP 379
Query 314 VIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGL 355
G PLADLIQP L+V+V+LGY D YG SYADV TP GL
Sbjct 380 YAGPPLADLIQPQLRVLVDLGYSD--YGPGLSYADVPTPAGL 419
>gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacterium marinum M]
gi|183173740|gb|ACC38850.1| PE family protein [Mycobacterium marinum M]
Length=496
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 163/403 (41%), Positives = 221/403 (55%), Gaps = 27/403 (6%)
Query 24 KSRRFTVRFHQTLAAAANSYADAEAAIAS---TRQNQLAVPAAAPTPAAAAMIPPFPANL 80
++ F F + LA A +SYA EA+ A Q Q + A T A + P A
Sbjct 68 QASAFQTEFTRLLATAGDSYAITEASNALGALNTQAQTLLGGAFGTAAGTSATGPLAAGT 127
Query 81 TTLF-FGPTGIPLPPPSMLTPP----IRCRSVRRALQAVFTPEELYPLT-GVRSLVLNTS 134
F G T IP P + +T I Q +FTPE+L+P T + SL S
Sbjct 128 HVAFVMGGTAIPWPDATYVTAVQDLFIDPHFPGFTTQVLFTPEQLWPFTSNLGSLTFGQS 187
Query 135 VEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLV 194
V +G+ IL DA+ +L+ N VFG+SQSA IA+ +++ F + PS S L+FVL
Sbjct 188 VAQGVAILRDALSAQLSDPANTAVVFGYSQSATIATNQIRAFMSQLNP-PSPSQLSFVLT 246
Query 195 GNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFIS 254
GN NP+GG+L RF L LP +D+ F GATP D+ YPTAIYT +YDG A+F RYPLN +S
Sbjct 247 GNPNNPDGGVLERFNGLYLPIVDVLFNGATPPDSPYPTAIYTAQYDGIANFPRYPLNVVS 306
Query 255 DLNAVAGITFVHTKYLDLTPA--------QVEGATKLPTSPGYTGVTDYYIIRTENRPLL 306
D+NA+ G + Y LT V A +LPTSPGYTG T+YY++ ++ PL
Sbjct 307 DVNAIMGFLYDEHYYAGLTSDPNAIGSGPTVANAVQLPTSPGYTGNTEYYMVLGQHLPLT 366
Query 307 QPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIAD 366
PLR +P +G P+ADLIQP+L+VIV+LGY D YG +YAD+ TP L+ P ++
Sbjct 367 DPLRQIPYVGTPIADLIQPSLRVIVDLGYSD--YGPGQNYADIPTPASLFSLPNPLAVSY 424
Query 367 ALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVA 409
L G +G+ F D LPQ LP VA+++
Sbjct 425 YLGKGAVQGVQAFMVDEG-------WLPQSYLPDTYPYVASLS 460
Lambda K H
0.320 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1153213694076
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40