BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0156
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607298|ref|NP_214670.1| NAD(P) transhydrogenase subunit alp... 216 7e-55
gi|340625192|ref|YP_004743644.1| putative NAD(P) transhydrogenas... 215 2e-54
gi|339296867|gb|AEJ48977.1| NAD(P) transhydrogenase subunit alph... 214 3e-54
gi|31791334|ref|NP_853827.1| NAD(P) transhydrogenase subunit alp... 213 6e-54
gi|296167346|ref|ZP_06849748.1| NAD(P) transhydrogenase subunit ... 185 2e-45
gi|41409671|ref|NP_962507.1| PntAB [Mycobacterium avium subsp. p... 182 2e-44
gi|240168164|ref|ZP_04746823.1| NAD(P) transhydrogenase (subunit... 180 6e-44
gi|342859412|ref|ZP_08716066.1| NAD(P) transhydrogenase subunit ... 180 8e-44
gi|254822351|ref|ZP_05227352.1| PntAB protein [Mycobacterium int... 180 8e-44
gi|15828424|ref|NP_302687.1| pyridine transhydrogenase subunit [... 176 1e-42
gi|118619799|ref|YP_908131.1| NAD(P) transhydrogenase (subunit a... 172 1e-41
gi|226307485|ref|YP_002767445.1| nicotinamide nucleotide transhy... 162 1e-38
gi|226360699|ref|YP_002778477.1| nicotinamide nucleotide transhy... 158 3e-37
gi|111018581|ref|YP_701553.1| nicotinamide nucleotide transhydro... 157 6e-37
gi|54022981|ref|YP_117223.1| putative pyridine nucleotide transh... 154 3e-36
gi|118471935|ref|YP_884567.1| PntAB protein [Mycobacterium smegm... 151 3e-35
gi|169631652|ref|YP_001705301.1| NAD(P) transhydrogenase, alpha2... 151 4e-35
gi|312139109|ref|YP_004006445.1| nad(p) transhydrogenase alpha s... 148 3e-34
gi|343925408|ref|ZP_08764928.1| nicotinamide nucleotide transhyd... 145 2e-33
gi|262204356|ref|YP_003275564.1| oxidoreductase [Gordonia bronch... 144 5e-33
gi|331699152|ref|YP_004335391.1| nicotinamide nucleotide transhy... 142 2e-32
gi|256378763|ref|YP_003102423.1| NAD/NADP transhydrogenase alpha... 142 2e-32
gi|324999244|ref|ZP_08120356.1| pyridine transhydrogenase subuni... 139 2e-31
gi|296394250|ref|YP_003659134.1| oxidoreductase [Segniliparus ro... 136 1e-30
gi|317508539|ref|ZP_07966204.1| PntAB protein [Segniliparus rugo... 136 1e-30
gi|300784008|ref|YP_003764299.1| NAD(P) transhydrogenase subunit... 117 7e-25
gi|257055073|ref|YP_003132905.1| hypothetical protein Svir_10210... 116 9e-25
gi|345302574|ref|YP_004824476.1| oxidoreductase [Rhodothermus ma... 115 1e-24
gi|268317719|ref|YP_003291438.1| oxidoreductase [Rhodothermus ma... 115 2e-24
gi|134102267|ref|YP_001107928.1| putative pyridine nucleotide tr... 111 4e-23
gi|338212308|ref|YP_004656363.1| pyridine nucleotide transhydrog... 108 2e-22
gi|118587563|ref|ZP_01544987.1| pyridine transhydrogenase subuni... 107 8e-22
gi|256425442|ref|YP_003126095.1| pyridine nucleotide transhydrog... 106 1e-21
gi|290889848|ref|ZP_06552935.1| hypothetical protein AWRIB429_03... 105 2e-21
gi|220907653|ref|YP_002482964.1| nicotinamide nucleotide transhy... 104 4e-21
gi|170077606|ref|YP_001734244.1| nicotinamide nucleotide transhy... 102 2e-20
gi|325965191|ref|YP_004243097.1| hypothetical protein Asphe3_387... 102 2e-20
gi|108805724|ref|YP_645661.1| pyridine transhydrogenase subunit ... 101 3e-20
gi|113478079|ref|YP_724140.1| nicotinamide nucleotide transhydro... 101 4e-20
gi|307151935|ref|YP_003887319.1| oxidoreductase [Cyanothece sp. ... 101 4e-20
gi|218441174|ref|YP_002379503.1| nicotinamide nucleotide transhy... 100 6e-20
gi|119493860|ref|ZP_01624426.1| nicotinamide nucleotide transhyd... 99.8 1e-19
gi|221632509|ref|YP_002521730.1| NAD(P) transhydrogenase, alpha-... 99.4 2e-19
gi|284052525|ref|ZP_06382735.1| nicotinamide nucleotide transhyd... 99.4 2e-19
gi|186682023|ref|YP_001865219.1| nicotinamide nucleotide transhy... 99.4 2e-19
gi|119510158|ref|ZP_01629297.1| nicotinamide nucleotide transhyd... 99.0 2e-19
gi|269837972|ref|YP_003320200.1| NAD/NADP transhydrogenase alpha... 99.0 2e-19
gi|159028448|emb|CAO89891.1| unnamed protein product [Microcysti... 98.6 3e-19
gi|75909635|ref|YP_323931.1| nicotinamide nucleotide transhydrog... 98.2 4e-19
gi|116672627|ref|YP_833560.1| putative NAD(P) transhydrogenase s... 98.2 4e-19
>gi|15607298|ref|NP_214670.1| NAD(P) transhydrogenase subunit alpha [Mycobacterium tuberculosis
H37Rv]
gi|148659920|ref|YP_001281443.1| putative NAD(P) transhydrogenase subunit alpha PntAb [Mycobacterium
tuberculosis H37Ra]
gi|148821348|ref|YP_001286102.1| NAD(P) transhydrogenase alpha subunit pntAb [Mycobacterium tuberculosis
F11]
68 more sequence titles
Length=110
Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS
Sbjct 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
Sbjct 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
>gi|340625192|ref|YP_004743644.1| putative NAD(P) transhydrogenase (subunit alpha) PNTAB [second
part; integral membrane protein] (pyridine nucleotide transhydrogenase
subunit alpha) (nicotinamide nucleotide transhydrogenase
subunit alpha) [Mycobacterium canettii CIPT 140010059]
gi|340003382|emb|CCC42502.1| putative NAD(P) transhydrogenase (subunit alpha) PNTAB [second
part; integral membrane protein] (pyridine nucleotide transhydrogenase
subunit alpha) (nicotinamide nucleotide transhydrogenase
subunit alpha) [Mycobacterium canettii CIPT 140010059]
Length=110
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/110 (99%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MYNELLEN+AILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS
Sbjct 1 MYNELLENVAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
Sbjct 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
>gi|339296867|gb|AEJ48977.1| NAD(P) transhydrogenase subunit alpha [Mycobacterium tuberculosis
CCDC5180]
Length=110
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/110 (99%), Positives = 109/110 (99%), Gaps = 0/110 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALV FGEIEHPS
Sbjct 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVFFGEIEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
Sbjct 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
>gi|31791334|ref|NP_853827.1| NAD(P) transhydrogenase subunit alpha [Mycobacterium bovis AF2122/97]
gi|121636068|ref|YP_976291.1| putative NAD(p) transhydrogenase (subunit alpha) pntAb [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224988541|ref|YP_002643228.1| putative NAD(P) transhydrogenase subunit alpha [Mycobacterium
bovis BCG str. Tokyo 172]
gi|31616919|emb|CAD93025.1| PROBABLE NAD(P) TRANSHYDROGENASE (SUBUNIT ALPHA) PNTAb [SECOND
PART; INTEGRAL MEMBRANE PROTEIN] (PYRIDINE NUCLEOTIDE TRANSHYDROGENASE
SUBUNIT ALPHA) (NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE
SUBUNIT ALPHA) [Mycobacterium bovis AF2122/97]
gi|121491715|emb|CAL70176.1| Probable nad(p) transhydrogenase (subunit alpha) pntAb [second
part] [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771654|dbj|BAH24460.1| putative NAD(P) transhydrogenase subunit alpha [Mycobacterium
bovis BCG str. Tokyo 172]
gi|341600084|emb|CCC62753.1| probable nad(p) transhydrogenase (subunit alpha) pntAb [second
part] [Mycobacterium bovis BCG str. Moreau RDJ]
Length=110
Score = 213 bits (543), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/110 (99%), Positives = 109/110 (99%), Gaps = 0/110 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M NELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS
Sbjct 1 MCNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
Sbjct 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
>gi|296167346|ref|ZP_06849748.1| NAD(P) transhydrogenase subunit PntAb [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897290|gb|EFG76894.1| NAD(P) transhydrogenase subunit PntAb [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=109
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/104 (90%), Positives = 98/104 (95%), Gaps = 0/104 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY+ELL NLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGE+EHPS
Sbjct 1 MYDELLANLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEVEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPD 104
L +Q+ILFVAVVFGTLNVIGGFIVTDRMLGMFK KK AVP K +
Sbjct 61 LAVQIILFVAVVFGTLNVIGGFIVTDRMLGMFKGKKKAVPVKTE 104
>gi|41409671|ref|NP_962507.1| PntAB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118464368|ref|YP_884258.1| PntAB protein [Mycobacterium avium 104]
gi|254777483|ref|ZP_05218999.1| PntAB protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|41398503|gb|AAS06123.1| PntAB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165655|gb|ABK66552.1| PntAB protein [Mycobacterium avium 104]
gi|336459890|gb|EGO38802.1| hypothetical protein MAPs_45330 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=105
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/110 (85%), Positives = 99/110 (90%), Gaps = 5/110 (4%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY+ELL NLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFG +EHPS
Sbjct 1 MYDELLANLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGSVEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
L +Q+ILFVAVVFGTLNVIGGFIVTDRMLGMFK+KKPA DEA +
Sbjct 61 LAMQIILFVAVVFGTLNVIGGFIVTDRMLGMFKSKKPA-----KADEAAK 105
>gi|240168164|ref|ZP_04746823.1| NAD(P) transhydrogenase (subunit alpha) PntAb [Mycobacterium
kansasii ATCC 12478]
Length=112
Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/107 (84%), Positives = 97/107 (91%), Gaps = 0/107 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY++LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFG +E+PS
Sbjct 1 MYDQLLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGRVENPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDE 107
+ +Q+ILFVAVVFGTLNVIGGFIVTDRMLGMFK KKP K + E
Sbjct 61 IAVQIILFVAVVFGTLNVIGGFIVTDRMLGMFKGKKPQAATKAAKKE 107
>gi|342859412|ref|ZP_08716066.1| NAD(P) transhydrogenase subunit alpha [Mycobacterium colombiense
CECT 3035]
gi|342133653|gb|EGT86856.1| NAD(P) transhydrogenase subunit alpha [Mycobacterium colombiense
CECT 3035]
Length=109
Score = 180 bits (456), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/108 (85%), Positives = 97/108 (90%), Gaps = 0/108 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY+ELL NLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFG +EHPS
Sbjct 1 MYDELLANLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGSVEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEA 108
L +Q+ILFVAVVFGTLNVIGGFIVTDRMLGMFK KK +PA + A
Sbjct 61 LAVQIILFVAVVFGTLNVIGGFIVTDRMLGMFKGKKKPLPAASEEPAA 108
>gi|254822351|ref|ZP_05227352.1| PntAB protein [Mycobacterium intracellulare ATCC 13950]
Length=109
Score = 180 bits (456), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/108 (85%), Positives = 97/108 (90%), Gaps = 0/108 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY+ELL N+AILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFG +EHPS
Sbjct 1 MYDELLANVAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGSVEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEA 108
L +Q+ILFVAVVFGTLNVIGGFIVTDRMLGMFK KK VPA + A
Sbjct 61 LAVQIILFVAVVFGTLNVIGGFIVTDRMLGMFKGKKKPVPAASEEPAA 108
>gi|15828424|ref|NP_302687.1| pyridine transhydrogenase subunit [alpha]2 [Mycobacterium leprae
TN]
gi|221230901|ref|YP_002504317.1| pyridine transhydrogenase subunit alpha2 [Mycobacterium leprae
Br4923]
gi|13093854|emb|CAC32167.1| pyridine transhydrogenase subunit [alpha]2 [Mycobacterium leprae]
gi|219934008|emb|CAR72735.1| pyridine transhydrogenase subunit [alpha]2 [Mycobacterium leprae
Br4923]
Length=112
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/105 (83%), Positives = 95/105 (91%), Gaps = 0/105 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY+ELL NLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIV+LGALVVFGE+ PS
Sbjct 1 MYDELLANLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVLLGALVVFGEVAQPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDR 105
L +Q+ILFVAVVFGTLNVIGGFIVTDRMLGMF+ KK A K ++
Sbjct 61 LAVQIILFVAVVFGTLNVIGGFIVTDRMLGMFRGKKKASAVKTEK 105
>gi|118619799|ref|YP_908131.1| NAD(P) transhydrogenase (subunit alpha) PntAb [Mycobacterium
ulcerans Agy99]
gi|183980409|ref|YP_001848700.1| NAD(P) transhydrogenase (subunit alpha) PntAb [Mycobacterium
marinum M]
gi|118571909|gb|ABL06660.1| NAD(P) transhydrogenase (subunit alpha) PntAb [Mycobacterium
ulcerans Agy99]
gi|183173735|gb|ACC38845.1| NAD(P) transhydrogenase (subunit alpha) PntAb [Mycobacterium
marinum M]
Length=112
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/94 (93%), Positives = 91/94 (97%), Gaps = 0/94 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY+ELL NLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGE+EHPS
Sbjct 1 MYDELLANLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEVEHPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKA 94
L +Q+ILFVAVVFGTLNVIGGFIVTDRMLGMFK
Sbjct 61 LAVQIILFVAVVFGTLNVIGGFIVTDRMLGMFKG 94
>gi|226307485|ref|YP_002767445.1| nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB
[Rhodococcus erythropolis PR4]
gi|229489975|ref|ZP_04383828.1| hypothetical protein RHOER0001_0363 [Rhodococcus erythropolis
SK121]
gi|226186602|dbj|BAH34706.1| probable nicotinamide nucleotide transhydrogenase alpha subunit
2 PntAB [Rhodococcus erythropolis PR4]
gi|229323076|gb|EEN88844.1| hypothetical protein RHOER0001_0363 [Rhodococcus erythropolis
SK121]
Length=107
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/107 (76%), Positives = 91/107 (86%), Gaps = 0/107 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY LL N+AILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVV G++ PS
Sbjct 1 MYTSLLANIAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGKVHDPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDE 107
+ LQ+ILFVA+VFGT+NV+GGF+VTDRML MFKAK A D D+
Sbjct 61 IGLQIILFVALVFGTVNVVGGFVVTDRMLAMFKAKPAAKSVSKDGDQ 107
>gi|226360699|ref|YP_002778477.1| nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB
[Rhodococcus opacus B4]
gi|226239184|dbj|BAH49532.1| nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB
[Rhodococcus opacus B4]
Length=110
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/95 (84%), Positives = 89/95 (94%), Gaps = 0/95 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY ELL N+AILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVV G++++P
Sbjct 1 MYTELLANIAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGKVDNPP 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAK 95
LQVILFVA+VFGT+NV+GGF+VTDRMLGMFK+K
Sbjct 61 WGLQVILFVALVFGTINVVGGFVVTDRMLGMFKSK 95
>gi|111018581|ref|YP_701553.1| nicotinamide nucleotide transhydrogenase alpha subunit [Rhodococcus
jostii RHA1]
gi|110818111|gb|ABG93395.1| probable nicotinamide nucleotide transhydrogenase alpha subunit
[Rhodococcus jostii RHA1]
Length=109
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY ELL N+AILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVV G++++P
Sbjct 1 MYTELLANIAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGKVDNPP 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVP 100
LQVILFVA+VFGT+NV+GGF+VTDRML MFK+ KP P
Sbjct 61 WGLQVILFVALVFGTINVVGGFVVTDRMLAMFKS-KPTAP 99
>gi|54022981|ref|YP_117223.1| putative pyridine nucleotide transhydrogenase alpha 2 subunit
[Nocardia farcinica IFM 10152]
gi|54014489|dbj|BAD55859.1| putative pyridine nucleotide transhydrogenase alpha 2 subunit
[Nocardia farcinica IFM 10152]
Length=104
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/92 (84%), Positives = 87/92 (95%), Gaps = 0/92 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY+ELL N+AILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALV G++E PS
Sbjct 1 MYSELLANIAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVTLGKMEDPS 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMF 92
+ +Q+ILFVA+VFGTLNV+GGF+VTDRMLGMF
Sbjct 61 IGIQIILFVALVFGTLNVVGGFVVTDRMLGMF 92
>gi|118471935|ref|YP_884567.1| PntAB protein [Mycobacterium smegmatis str. MC2 155]
gi|118173222|gb|ABK74118.1| PntAB protein [Mycobacterium smegmatis str. MC2 155]
Length=107
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 89/100 (89%), Gaps = 1/100 (1%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEI-EHP 59
MY++LL NLAILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGAL+V G++
Sbjct 1 MYDQLLANLAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALIVLGDLPADA 60
Query 60 SLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAV 99
S +++I FVA+VFGTLNVIGGF+VTDRMLGMFK +KP V
Sbjct 61 SWGVRIIAFVALVFGTLNVIGGFLVTDRMLGMFKTRKPEV 100
>gi|169631652|ref|YP_001705301.1| NAD(P) transhydrogenase, alpha2 subunit PntAB [Mycobacterium
abscessus ATCC 19977]
gi|169243619|emb|CAM64647.1| Probable NAD(P) transhydrogenase, alpha2 subunit PntAB [Mycobacterium
abscessus]
Length=109
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/111 (72%), Positives = 91/111 (82%), Gaps = 3/111 (2%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEI-EHP 59
MY +LL N+AILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGAL+V G +
Sbjct 1 MYGQLLANIAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALIVLGNLPADA 60
Query 60 SLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR 110
S +VI FVA++FGTLNVIGGF+VTDRMLGMFK+KKPA + EA +
Sbjct 61 SWGTRVIAFVALIFGTLNVIGGFLVTDRMLGMFKSKKPA--QSEQQKEAAK 109
>gi|312139109|ref|YP_004006445.1| nad(p) transhydrogenase alpha subunit pntab [Rhodococcus equi
103S]
gi|325673590|ref|ZP_08153281.1| NAD(P) transhydrogenase subunit alpha PntAB [Rhodococcus equi
ATCC 33707]
gi|311888448|emb|CBH47760.1| NAD(P) transhydrogenase alpha subunit PntAb [Rhodococcus equi
103S]
gi|325555611|gb|EGD25282.1| NAD(P) transhydrogenase subunit alpha PntAB [Rhodococcus equi
ATCC 33707]
Length=108
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/107 (73%), Positives = 88/107 (83%), Gaps = 1/107 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
MY ELL N+AILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVV G + +
Sbjct 1 MYTELLANIAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGHLPSDA 60
Query 61 -LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRD 106
+++ILFVA+VFGTLNV+GGF+VTDRML MFK KK A K D
Sbjct 61 PWSIKIILFVALVFGTLNVVGGFVVTDRMLAMFKPKKDAPAVKKGAD 107
>gi|343925408|ref|ZP_08764928.1| nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB
[Gordonia alkanivorans NBRC 16433]
gi|343764674|dbj|GAA11854.1| nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB
[Gordonia alkanivorans NBRC 16433]
Length=101
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/99 (78%), Positives = 85/99 (86%), Gaps = 1/99 (1%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEI-EHP 59
MY+ LL NLAILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVV G++
Sbjct 1 MYSGLLANLAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGKLPADA 60
Query 60 SLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPA 98
+++I FVA+VFGTLNVIGGF VTDRMLGMFK KK A
Sbjct 61 GWGVRIIAFVALVFGTLNVIGGFAVTDRMLGMFKGKKEA 99
>gi|262204356|ref|YP_003275564.1| oxidoreductase [Gordonia bronchialis DSM 43247]
gi|262087703|gb|ACY23671.1| oxidoreductase [Gordonia bronchialis DSM 43247]
Length=101
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/99 (76%), Positives = 83/99 (84%), Gaps = 1/99 (1%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEI-EHP 59
MY +LL N+AILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVV G +
Sbjct 1 MYTDLLANIAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGSLPADA 60
Query 60 SLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPA 98
++ I FVA+VFGTLNV+GGF VTDRMLGMFK KK A
Sbjct 61 GWGVRTIAFVALVFGTLNVVGGFAVTDRMLGMFKGKKEA 99
>gi|331699152|ref|YP_004335391.1| nicotinamide nucleotide transhydrogenase subunit alpha 2 PntAB
[Pseudonocardia dioxanivorans CB1190]
gi|326953841|gb|AEA27538.1| nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB
[Pseudonocardia dioxanivorans CB1190]
Length=116
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/108 (66%), Positives = 86/108 (80%), Gaps = 0/108 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M + LL N+AILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIV+LG L V G E+P
Sbjct 1 MESGLLANIAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVLLGGLYVLGTTENPG 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEA 108
+V ++L VA+ FG +NVIGGF+VTDRMLGMFK++ PA + E+
Sbjct 61 VVDSILLVVAIAFGMINVIGGFLVTDRMLGMFKSRPEPSPASAGKPES 108
>gi|256378763|ref|YP_003102423.1| NAD/NADP transhydrogenase alpha subunit-like protein [Actinosynnema
mirum DSM 43827]
gi|255923066|gb|ACU38577.1| NAD/NADP transhydrogenase alpha subunit-like protein [Actinosynnema
mirum DSM 43827]
Length=124
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/99 (74%), Positives = 83/99 (84%), Gaps = 1/99 (1%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEI-EHP 59
M+ +LL N AILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGAL+V GE+
Sbjct 1 MHEQLLANAAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALIVLGELPADA 60
Query 60 SLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPA 98
+ I FVA+VFGTLNV+GGF+VTDRMLGMFK +K A
Sbjct 61 GWGPRAIAFVALVFGTLNVVGGFLVTDRMLGMFKGRKAA 99
>gi|324999244|ref|ZP_08120356.1| pyridine transhydrogenase subunit alpha2 [Pseudonocardia sp.
P1]
Length=109
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/106 (67%), Positives = 85/106 (81%), Gaps = 1/106 (0%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M + LL N+AILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIV+LGA+VV G E
Sbjct 1 MDSGLLANIAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVLLGAIVVLGR-EEVG 59
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRD 106
+V +IL VA+ FG +NV+GGF+VTDRMLGMFK K P K +++
Sbjct 60 VVDAIILVVAIAFGVINVVGGFLVTDRMLGMFKGKTPGAAKKAEQN 105
>gi|296394250|ref|YP_003659134.1| oxidoreductase [Segniliparus rotundus DSM 44985]
gi|296181397|gb|ADG98303.1| oxidoreductase [Segniliparus rotundus DSM 44985]
Length=105
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/101 (71%), Positives = 87/101 (87%), Gaps = 2/101 (1%)
Query 3 NELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLV 62
LL+++A+LVL+GFVGF+VISKVPNTLHTPLMSGTNAIHGIVVLGALVV G+++ + V
Sbjct 4 QHLLDSIAVLVLAGFVGFSVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGDLKDDTPV 63
Query 63 -LQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAK 102
+ VI F+A+VFGTLNV+GGF+VTDRMLGMFK K P+K
Sbjct 64 GVWVIAFLALVFGTLNVVGGFVVTDRMLGMFKGKSKT-PSK 103
>gi|317508539|ref|ZP_07966204.1| PntAB protein [Segniliparus rugosus ATCC BAA-974]
gi|316253165|gb|EFV12570.1| PntAB protein [Segniliparus rugosus ATCC BAA-974]
Length=105
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/101 (71%), Positives = 85/101 (85%), Gaps = 2/101 (1%)
Query 3 NELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS-L 61
LL+++A+LVL+GFVGF+VISKVPNTLHTPLMSGTNAIHGIVVLGALVV GE+ +
Sbjct 4 QHLLDSIAVLVLAGFVGFSVISKVPNTLHTPLMSGTNAIHGIVVLGALVVLGELNAQTPW 63
Query 62 VLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAK 102
+ VI FVA++FGTLNV+GGF+VTDRMLGMFK K P+K
Sbjct 64 YVWVIAFVALIFGTLNVVGGFVVTDRMLGMFKPKTKT-PSK 103
>gi|300784008|ref|YP_003764299.1| NAD(P) transhydrogenase subunit alpha [Amycolatopsis mediterranei
U32]
gi|299793522|gb|ADJ43897.1| NAD(P) transhydrogenase subunit alpha [Amycolatopsis mediterranei
U32]
gi|340525411|gb|AEK40616.1| NAD(P) transhydrogenase subunit alpha [Amycolatopsis mediterranei
S699]
Length=100
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/101 (66%), Positives = 83/101 (83%), Gaps = 1/101 (0%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
+++NLA+LVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIV+LG LVV G +
Sbjct 1 MVQNLAVLVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVLLGGLVVLGLGVDGVFN-K 59
Query 65 VILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDR 105
++L +A+ FGT+NV+GGF+VTDRML MFKAKKPA + ++
Sbjct 60 ILLVIAIAFGTINVVGGFLVTDRMLSMFKAKKPAAGEEDEK 100
>gi|257055073|ref|YP_003132905.1| hypothetical protein Svir_10210 [Saccharomonospora viridis DSM
43017]
gi|256584945|gb|ACU96078.1| hypothetical protein Svir_10210 [Saccharomonospora viridis DSM
43017]
Length=106
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/101 (62%), Positives = 78/101 (78%), Gaps = 3/101 (2%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
L+ NLAILVL+GF+GF VIS+VP TLHTPLMSGTNAIHGIV+LG L+V G + ++ +
Sbjct 2 LVHNLAILVLAGFLGFVVISRVPTTLHTPLMSGTNAIHGIVLLGGLIVLG-MGTEGVLNK 60
Query 65 VILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDR 105
V+ +A+ GT+NV+GGF+VTDRMLGMFK K P DR
Sbjct 61 VLSVIAIALGTINVVGGFLVTDRMLGMFKRKSEDRPV--DR 99
>gi|345302574|ref|YP_004824476.1| oxidoreductase [Rhodothermus marinus SG0.5JP17-172]
gi|345111807|gb|AEN72639.1| oxidoreductase [Rhodothermus marinus SG0.5JP17-172]
Length=106
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/104 (57%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
+L+NL I VL+ FVGF VISKVP TLHTPLMSG+NAI GI ++GALVV G + +
Sbjct 1 MLDNLIIFVLAAFVGFEVISKVPQTLHTPLMSGSNAISGITIVGALVVAGMV--GGTWSK 58
Query 65 VILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEA 108
+ FVA++ T+NV+GGF+VTDRML MFKA++ PA+ ++ EA
Sbjct 59 WLGFVALIAATINVVGGFLVTDRMLQMFKAREQRAPAQAEKAEA 102
>gi|268317719|ref|YP_003291438.1| oxidoreductase [Rhodothermus marinus DSM 4252]
gi|262335253|gb|ACY49050.1| oxidoreductase [Rhodothermus marinus DSM 4252]
Length=106
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/104 (57%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
+L+NL I VL+ FVGF VISKVP TLHTPLMSG+NAI GI ++GALVV G + +
Sbjct 1 MLDNLIIFVLAAFVGFEVISKVPQTLHTPLMSGSNAISGITIVGALVVAGMV--GGTWSK 58
Query 65 VILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEA 108
+ FVA++ T+NV+GGF+VTDRML MFKA++ PA+ ++ EA
Sbjct 59 WLGFVALIAATVNVVGGFLVTDRMLQMFKAREQRAPAQAEKAEA 102
>gi|134102267|ref|YP_001107928.1| putative pyridine nucleotide transhydrogenase alpha 2 subunit
[Saccharopolyspora erythraea NRRL 2338]
gi|291003770|ref|ZP_06561743.1| putative pyridine nucleotide transhydrogenase alpha 2 subunit
[Saccharopolyspora erythraea NRRL 2338]
gi|133914890|emb|CAM05003.1| putative pyridine nucleotide transhydrogenase alpha 2 subunit
[Saccharopolyspora erythraea NRRL 2338]
Length=101
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/101 (66%), Positives = 80/101 (80%), Gaps = 1/101 (0%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
L NLAILVL+GFVGFAVISKVPNTLHTPLMSGTNAIHGIV+LG +VV G +L +
Sbjct 2 FLANLAILVLAGFVGFAVISKVPNTLHTPLMSGTNAIHGIVLLGGVVVLGSGVDSALS-R 60
Query 65 VILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDR 105
+ VA+VFGT+NV+GGF+VTDRMLGMFK ++ + +R
Sbjct 61 ALAVVAIVFGTINVVGGFLVTDRMLGMFKQRRSDAGKETER 101
>gi|338212308|ref|YP_004656363.1| pyridine nucleotide transhydrogenase subunit alpha [Runella slithyformis
DSM 19594]
gi|336306129|gb|AEI49231.1| pyridine nucleotide transhydrogenase subunit alpha [Runella slithyformis
DSM 19594]
Length=102
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/96 (61%), Positives = 74/96 (78%), Gaps = 6/96 (6%)
Query 4 ELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIE---HPS 60
E ++ + IL+LS FVG VISKVP+ LHTPLMSG NAIHG+V++GA++V G E P+
Sbjct 10 ENIQLIYILILSIFVGIEVISKVPSALHTPLMSGANAIHGVVIIGAIIVMGHAEAGNWPA 69
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
L+L F+AV+ GTLNV+GGF+VTDRML MFK KK
Sbjct 70 LILG---FLAVILGTLNVVGGFVVTDRMLEMFKKKK 102
>gi|118587563|ref|ZP_01544987.1| pyridine transhydrogenase subunit [Oenococcus oeni ATCC BAA-1163]
gi|118432014|gb|EAV38756.1| pyridine transhydrogenase subunit [Oenococcus oeni ATCC BAA-1163]
Length=102
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/105 (52%), Positives = 73/105 (70%), Gaps = 3/105 (2%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M EL NLAI VLS VGF V+SK+P+TL TP+MSG NAIHG+VV+GA + E +
Sbjct 1 MSEELYANLAIFVLSLLVGFEVMSKIPSTLQTPMMSGANAIHGVVVVGAFAIAAEANN-- 58
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDR 105
+L +++F A +F +NV GG+ VTDRMLGMF +KP+ + D+
Sbjct 59 WLLYILVFFAALFAAINVSGGYTVTDRMLGMFD-RKPSDKKEADK 102
>gi|256425442|ref|YP_003126095.1| pyridine nucleotide transhydrogenase subunit alpha [Chitinophaga
pinensis DSM 2588]
gi|256040350|gb|ACU63894.1| pyridine nucleotide transhydrogenase subunit alpha [Chitinophaga
pinensis DSM 2588]
Length=104
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/92 (56%), Positives = 72/92 (79%), Gaps = 0/92 (0%)
Query 6 LENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQV 65
LE I++LS F+G VIS+VP+ LHTPLMSG NAIHG+V++GA++V G+ + + +
Sbjct 12 LELTYIVILSIFLGVEVISRVPSVLHTPLMSGANAIHGVVIIGAIIVMGQASDENYLALI 71
Query 66 ILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKP 97
+ F+AV+ GT+NV+GGF+VTDRML MFK+KK
Sbjct 72 LGFLAVILGTINVVGGFVVTDRMLEMFKSKKT 103
>gi|290889848|ref|ZP_06552935.1| hypothetical protein AWRIB429_0325 [Oenococcus oeni AWRIB429]
gi|290480458|gb|EFD89095.1| hypothetical protein AWRIB429_0325 [Oenococcus oeni AWRIB429]
Length=102
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/105 (51%), Positives = 73/105 (70%), Gaps = 3/105 (2%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M EL NLAI VLS VGF V+SK+P+TL TP+MSG NAIHG+VV+GA + + +
Sbjct 1 MSEELYANLAIFVLSLLVGFEVMSKIPSTLQTPMMSGANAIHGVVVVGAFAIAAKANN-- 58
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDR 105
+L +++F A +F +NV GG+ VTDRMLGMF +KP+ + D+
Sbjct 59 WLLYILVFFAALFAAINVSGGYTVTDRMLGMFD-RKPSDKKEADK 102
>gi|220907653|ref|YP_002482964.1| nicotinamide nucleotide transhydrogenase subunit alpha 2 (A2)
[Cyanothece sp. PCC 7425]
gi|219864264|gb|ACL44603.1| putative nicotinamide nucleotide transhydrogenase, subunit alpha
2 (A2) [Cyanothece sp. PCC 7425]
Length=97
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M E++ L +LVL+ FVGF VI+KVP TLHTPLMSG+NAI GI VLGAL++ G +
Sbjct 1 MTEEIIAGLVVLVLASFVGFEVINKVPPTLHTPLMSGSNAISGIAVLGALLIAGPKDWN- 59
Query 61 LVLQVIL-FVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAV 99
L VIL +AVV T+NV+GGF+VTDRML MFK K+ V
Sbjct 60 --LTVILGLIAVVLATINVVGGFLVTDRMLQMFKKKEAKV 97
>gi|170077606|ref|YP_001734244.1| nicotinamide nucleotide transhydrogenase, chain alpha, part 2
[Synechococcus sp. PCC 7002]
gi|169885275|gb|ACA98988.1| nicotinamide nucleotide transhydrogenase, chain alpha, part 2
[Synechococcus sp. PCC 7002]
Length=96
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/92 (61%), Positives = 72/92 (79%), Gaps = 2/92 (2%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
LL +L + VL+ FVGF VI+KVP TLHTPLMSG NAI GI ++GAL+V GE EH +L +
Sbjct 6 LLSSLFVFVLASFVGFEVINKVPPTLHTPLMSGANAISGIALIGALLVSGE-EHWNLTV- 63
Query 65 VILFVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
++ +AVV T+NV+GGF+VTDRML MFK K+
Sbjct 64 ILGLIAVVCATINVVGGFLVTDRMLQMFKKKE 95
>gi|325965191|ref|YP_004243097.1| hypothetical protein Asphe3_38750 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323471278|gb|ADX74963.1| hypothetical protein Asphe3_38750 [Arthrobacter phenanthrenivorans
Sphe3]
Length=106
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/90 (63%), Positives = 69/90 (77%), Gaps = 2/90 (2%)
Query 9 LAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQVILF 68
L I VL+ FVGF V+SKV +TLHTPLMSG NAIHGI+++GA++V G+ P LVL V L
Sbjct 7 LTITVLAVFVGFEVVSKVSSTLHTPLMSGANAIHGIILVGAIIVAGQAADP-LVLGVALL 65
Query 69 VAVVFGTLNVIGGFIVTDRMLGMFKAKKPA 98
AVV T N++GGF+VTDRML MF A+K A
Sbjct 66 -AVVLATANLVGGFVVTDRMLHMFHARKAA 94
>gi|108805724|ref|YP_645661.1| pyridine transhydrogenase subunit (alpha)2 [Rubrobacter xylanophilus
DSM 9941]
gi|108766967|gb|ABG05849.1| pyridine transhydrogenase subunit (alpha)2 [Rubrobacter xylanophilus
DSM 9941]
Length=101
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/90 (53%), Positives = 67/90 (75%), Gaps = 2/90 (2%)
Query 4 ELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVL 63
+ L LA+ V++ F+G+ +IS+VPN LHTPLMS TNAIHG++++G ++ E +P+ +
Sbjct 3 QFLAQLAVFVVAAFLGWELISRVPNLLHTPLMSATNAIHGVILVGGMIALSESTNPA--I 60
Query 64 QVILFVAVVFGTLNVIGGFIVTDRMLGMFK 93
+ FVAV FG LNV+GGF VT+RMLGMF
Sbjct 61 TAVCFVAVFFGALNVVGGFWVTNRMLGMFA 90
>gi|113478079|ref|YP_724140.1| nicotinamide nucleotide transhydrogenase alpha [Trichodesmium
erythraeum IMS101]
gi|110169127|gb|ABG53667.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Trichodesmium
erythraeum IMS101]
Length=97
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/96 (57%), Positives = 69/96 (72%), Gaps = 2/96 (2%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M L+ L + VL+ F GF VI+KVP TLHTPLMSG NAI GI VLGAL++ G+ +
Sbjct 1 MSETLIAALFVFVLASFAGFEVINKVPPTLHTPLMSGANAISGIAVLGALIIAGDKDWN- 59
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
V ++ +AVVF T+NV+GGF+VTDRML MFK K+
Sbjct 60 -VTVILGLIAVVFATINVVGGFLVTDRMLQMFKKKE 94
>gi|307151935|ref|YP_003887319.1| oxidoreductase [Cyanothece sp. PCC 7822]
gi|306982163|gb|ADN14044.1| oxidoreductase [Cyanothece sp. PCC 7822]
Length=98
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/97 (59%), Positives = 69/97 (72%), Gaps = 4/97 (4%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M ELL L + VL+ FVGF VI+KVP TLHTPLMSG NAI GI V+GAL++ G E
Sbjct 1 MSPELLTGLVVFVLASFVGFEVINKVPPTLHTPLMSGANAISGIAVVGALLISGPTEWN- 59
Query 61 LVLQVIL-FVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
L VIL +AV+ +NV+GGF+VTDRML MFK K+
Sbjct 60 --LTVILGLIAVILAMINVVGGFVVTDRMLQMFKKKE 94
>gi|218441174|ref|YP_002379503.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Cyanothece
sp. PCC 7424]
gi|218173902|gb|ACK72635.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Cyanothece
sp. PCC 7424]
Length=98
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/97 (59%), Positives = 69/97 (72%), Gaps = 4/97 (4%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M ELL L + VL+ FVGF VI+KVP TLHTPLMSG NAI GI V+GAL++ G E
Sbjct 1 MSPELLTGLVVFVLASFVGFEVINKVPPTLHTPLMSGANAISGIAVVGALLIAGTKEWN- 59
Query 61 LVLQVIL-FVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
L VIL +AV+ +NV+GGF+VTDRML MFK K+
Sbjct 60 --LTVILGLIAVILAMINVVGGFVVTDRMLQMFKKKE 94
>gi|119493860|ref|ZP_01624426.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Lyngbya
sp. PCC 8106]
gi|119452409|gb|EAW33599.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Lyngbya
sp. PCC 8106]
Length=98
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/95 (57%), Positives = 68/95 (72%), Gaps = 2/95 (2%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
L+ L + VL+ F GF VI+KVP TLHTPLMSG NAI GI VLGAL++ GE + V
Sbjct 6 LISALFVFVLATFAGFEVITKVPPTLHTPLMSGANAISGIAVLGALIIAGERDWNVTV-- 63
Query 65 VILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAV 99
++ +AVV T+NV+GGF+VTDRML MFK K+ V
Sbjct 64 ILGLIAVVLATINVVGGFLVTDRMLQMFKKKEAKV 98
>gi|221632509|ref|YP_002521730.1| NAD(P) transhydrogenase, alpha-2 subunit [Thermomicrobium roseum
DSM 5159]
gi|221157205|gb|ACM06332.1| NAD(P) transhydrogenase, alpha-2 subunit [Thermomicrobium roseum
DSM 5159]
Length=117
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/108 (52%), Positives = 70/108 (65%), Gaps = 2/108 (1%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M E L L +L+L+ F+GF VIS+VP LHTPLMSGTNAIHGIV+LG ++V G E+P
Sbjct 1 MNQEFLLGLYVLILTIFLGFEVISRVPTLLHTPLMSGTNAIHGIVLLGGILVAGTAENPL 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEA 108
+L L G N+ GG +VTDRML MFK K+PA +R A
Sbjct 61 TLLLGFLGCLFGAG--NLFGGIVVTDRMLEMFKKKEPAARQAGERSTA 106
>gi|284052525|ref|ZP_06382735.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Arthrospira
platensis str. Paraca]
gi|291571995|dbj|BAI94267.1| putative nicotinamide nucleotide transhydrogenase alpha subunit
[Arthrospira platensis NIES-39]
Length=98
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/93 (60%), Positives = 68/93 (74%), Gaps = 4/93 (4%)
Query 5 LLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQ 64
L+ L + VL+ F GF VI+KVP TLHTPLMSG NAI GI VLGA+++ GE + +
Sbjct 6 LISALFVFVLASFAGFEVITKVPPTLHTPLMSGANAISGIAVLGAIIIAGEQDWN---IT 62
Query 65 VIL-FVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
VIL VAVV T+NV+GGF+VTDRML MFK K+
Sbjct 63 VILGIVAVVLATINVVGGFLVTDRMLQMFKKKE 95
>gi|186682023|ref|YP_001865219.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Nostoc
punctiforme PCC 73102]
gi|186464475|gb|ACC80276.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Nostoc
punctiforme PCC 73102]
Length=97
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/97 (57%), Positives = 69/97 (72%), Gaps = 4/97 (4%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M LL L + VL+ F+GF VI+K+P TLHTPLMSG+NAI GI VLGA+V G +
Sbjct 1 MTEALLAALFVFVLASFIGFEVINKIPPTLHTPLMSGSNAISGIAVLGAIVAAGARDTS- 59
Query 61 LVLQVIL-FVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
+ VIL +AVV T+NV+GGF+VTDRML MFK K+
Sbjct 60 --VSVILGLIAVVLATINVVGGFLVTDRMLQMFKKKE 94
>gi|119510158|ref|ZP_01629297.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Nodularia
spumigena CCY9414]
gi|119465219|gb|EAW46117.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Nodularia
spumigena CCY9414]
Length=97
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/97 (57%), Positives = 69/97 (72%), Gaps = 4/97 (4%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M LL L + VL+ F+GF VI+K+P TLHTPLMSG+NAI GI VLGA+V G +
Sbjct 1 MTEALLAALFVFVLASFIGFEVINKIPPTLHTPLMSGSNAISGIAVLGAIVAAGAKDTS- 59
Query 61 LVLQVIL-FVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
+ VIL +AVV T+NV+GGF+VTDRML MFK K+
Sbjct 60 --VSVILGLIAVVLATVNVVGGFLVTDRMLQMFKKKE 94
>gi|269837972|ref|YP_003320200.1| NAD/NADP transhydrogenase alpha subunit-like protein [Sphaerobacter
thermophilus DSM 20745]
gi|269787235|gb|ACZ39378.1| NAD/NADP transhydrogenase alpha subunit-like protein [Sphaerobacter
thermophilus DSM 20745]
Length=98
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/97 (57%), Positives = 70/97 (73%), Gaps = 3/97 (3%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M EL+ + +L+ F+G VI +VP+TLHTPLMS TNAIHGIV++GA++V G + P
Sbjct 1 MSQELILGAYVFLLALFLGVEVIGRVPSTLHTPLMSATNAIHGIVLIGAILVAGTADSP- 59
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKP 97
+L V+ FVA+V G NV GGF VTDRML MFK KKP
Sbjct 60 -LLYVLAFVAIVLGAGNVFGGFAVTDRMLEMFK-KKP 94
>gi|159028448|emb|CAO89891.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length=98
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/96 (55%), Positives = 69/96 (72%), Gaps = 1/96 (1%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M +LL L + VL+ FVGF VI+KVP TLHTPLMSG NAI GI V+GAL++ G +
Sbjct 1 MTAQLLTALVVFVLASFVGFEVINKVPPTLHTPLMSGANAISGIAVVGALLIAGGTDWHE 60
Query 61 LVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
L + ++ +AV+ +NV+GGF+VTDRML MFK K+
Sbjct 61 LTV-ILGLIAVILAMVNVVGGFVVTDRMLQMFKKKE 95
>gi|75909635|ref|YP_323931.1| nicotinamide nucleotide transhydrogenase subunit alpha [Anabaena
variabilis ATCC 29413]
gi|75703360|gb|ABA23036.1| nicotinamide nucleotide transhydrogenase, subunit alpha [Anabaena
variabilis ATCC 29413]
Length=97
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/97 (56%), Positives = 69/97 (72%), Gaps = 4/97 (4%)
Query 1 MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPS 60
M L+ L + VL+ F+GF VI+K+P TLHTPLMSG+NAI GI V+GA+V GE
Sbjct 1 MTEALIAALFVFVLASFIGFEVINKIPPTLHTPLMSGSNAISGIAVIGAIVAAGERNTN- 59
Query 61 LVLQVIL-FVAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
L VIL +AV+ T+NV+GGF+VTDRML MFK K+
Sbjct 60 --LSVILGLIAVILATVNVVGGFLVTDRMLQMFKKKE 94
>gi|116672627|ref|YP_833560.1| putative NAD(P) transhydrogenase subunit alpha [Arthrobacter
sp. FB24]
gi|116612736|gb|ABK05460.1| putative NAD(P) transhydrogenase subunit alpha [Arthrobacter
sp. FB24]
Length=98
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/88 (61%), Positives = 67/88 (77%), Gaps = 2/88 (2%)
Query 9 LAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQVILF 68
L I VL+ FVGF V+SKV +TLHTPLMSG NAIHGI+++GA++V G+ P VL V L
Sbjct 7 LTITVLAVFVGFEVVSKVSSTLHTPLMSGANAIHGIILVGAIIVAGQAADP-WVLGVALL 65
Query 69 VAVVFGTLNVIGGFIVTDRMLGMFKAKK 96
AVV T N++GGF+VTDRML MF+ +K
Sbjct 66 -AVVLATANLVGGFVVTDRMLEMFRGRK 92
Lambda K H
0.326 0.144 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129022162688
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40