BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0159c
Length=468
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116696|ref|YP_177697.1| PE family protein [Mycobacterium tu... 926 0.0
gi|148821351|ref|YP_001286105.1| PE family protein [Mycobacteriu... 925 0.0
gi|298527551|ref|ZP_07014960.1| PE family protein [Mycobacterium... 923 0.0
gi|31791337|ref|NP_853830.1| PE family protein [Mycobacterium bo... 922 0.0
gi|15839539|ref|NP_334576.1| PE family protein [Mycobacterium tu... 921 0.0
gi|340625196|ref|YP_004743648.1| PE family protein [Mycobacteriu... 920 0.0
gi|240168166|ref|ZP_04746825.1| PE family protein [Mycobacterium... 681 0.0
gi|289568057|ref|ZP_06448284.1| predicted protein [Mycobacterium... 633 3e-179
gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium... 480 2e-133
gi|15839540|ref|NP_334577.1| PE family protein [Mycobacterium tu... 463 3e-128
gi|289568058|ref|ZP_06448285.1| PE family protein [Mycobacterium... 463 3e-128
gi|254549098|ref|ZP_05139545.1| PE family protein [Mycobacterium... 462 4e-128
gi|339630242|ref|YP_004721884.1| PE family protein [Mycobacteriu... 462 5e-128
gi|31791338|ref|NP_853831.1| PE family protein [Mycobacterium bo... 462 6e-128
gi|289441535|ref|ZP_06431279.1| PE family protein [Mycobacterium... 462 6e-128
gi|340625197|ref|YP_004743649.1| PE family protein [Mycobacteriu... 461 1e-127
gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacteriu... 448 1e-123
gi|240168173|ref|ZP_04746832.1| PE family protein [Mycobacterium... 446 4e-123
gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobac... 440 3e-121
gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium u... 433 3e-119
gi|240168172|ref|ZP_04746831.1| PE family protein [Mycobacterium... 416 6e-114
gi|183980413|ref|YP_001848704.1| PE-PGRS family protein [Mycobac... 414 2e-113
gi|240168171|ref|ZP_04746830.1| PE-PGRS family protein [Mycobact... 394 2e-107
gi|240168170|ref|ZP_04746829.1| PE-PGRS family protein [Mycobact... 373 3e-101
gi|289764277|ref|ZP_06523655.1| PE family protein [Mycobacterium... 372 7e-101
gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacteriu... 367 3e-99
gi|289572740|ref|ZP_06452967.1| PE family protein [Mycobacterium... 341 2e-91
gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacteriu... 325 9e-87
gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium... 322 7e-86
gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tu... 310 2e-82
gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacteriu... 308 2e-81
gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacteriu... 305 1e-80
gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium... 297 2e-78
gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bo... 297 3e-78
gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium... 296 4e-78
gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tu... 296 4e-78
gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium... 295 8e-78
gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium... 295 1e-77
gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [My... 293 6e-77
gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tu... 292 7e-77
gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacteriu... 292 7e-77
gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacteriu... 292 8e-77
gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacteriu... 290 4e-76
gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacteriu... 287 3e-75
gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacteriu... 285 2e-74
gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacteriu... 281 2e-73
gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacteri... 280 3e-73
gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium... 278 2e-72
gi|289761589|ref|ZP_06520967.1| PE family protein [Mycobacterium... 277 3e-72
gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacteriu... 276 6e-72
>gi|57116696|ref|YP_177697.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659923|ref|YP_001281446.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|167970280|ref|ZP_02552557.1| PE family protein [Mycobacterium tuberculosis H37Ra]
11 more sequence titles
Length=468
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/468 (100%), Positives = 468/468 (100%), Gaps = 0/468 (0%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR
Sbjct 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
Query 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN
Sbjct 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
Query 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF
Sbjct 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
Query 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA
Sbjct 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
Query 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP
Sbjct 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
Query 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA
Sbjct 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
>gi|148821351|ref|YP_001286105.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253797081|ref|YP_003030082.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254366611|ref|ZP_04982655.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
49 more sequence titles
Length=468
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/468 (99%), Positives = 467/468 (99%), Gaps = 0/468 (0%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYVIAAPEMLAT AADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
Query 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN
Sbjct 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
Query 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF
Sbjct 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
Query 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA
Sbjct 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
Query 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP
Sbjct 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
Query 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA
Sbjct 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
>gi|298527551|ref|ZP_07014960.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497345|gb|EFI32639.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
Length=468
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/468 (99%), Positives = 467/468 (99%), Gaps = 0/468 (0%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYVIAAPEMLAT AADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
ECQEVLKQAAAFHGEFTRALAAAGAAYAQA+ASNTAAMSGTAGSSGALGSVGMLSGNPLT
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAQASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
Query 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN
Sbjct 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
Query 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF
Sbjct 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
Query 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA
Sbjct 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
Query 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP
Sbjct 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
Query 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA
Sbjct 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
>gi|31791337|ref|NP_853830.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636071|ref|YP_976294.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988544|ref|YP_002643231.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616922|emb|CAD93028.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491718|emb|CAL70179.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771657|dbj|BAH24463.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600087|emb|CCC62756.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=468
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/468 (99%), Positives = 466/468 (99%), Gaps = 0/468 (0%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYVIAAPEMLAT AADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
Query 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN
Sbjct 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
Query 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
PNGGVLERYVGLYL FLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF
Sbjct 241 PNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
Query 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA
Sbjct 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
Query 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP
Sbjct 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
Query 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA
Sbjct 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
>gi|15839539|ref|NP_334576.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|13879650|gb|AAK44390.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|323717147|gb|EGB26356.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=468
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/468 (99%), Positives = 466/468 (99%), Gaps = 0/468 (0%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYVIAAPEMLAT AADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
Query 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN
Sbjct 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
Query 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF
Sbjct 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
Query 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA
Sbjct 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
Query 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
ELIQPDL VLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP
Sbjct 361 ELIQPDLWVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
Query 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA
Sbjct 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
>gi|340625196|ref|YP_004743648.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003386|emb|CCC42506.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=468
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/468 (99%), Positives = 466/468 (99%), Gaps = 0/468 (0%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYVIAAPEMLAT AADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV 180
Query 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN
Sbjct 181 TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN 240
Query 241 PNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
PNGGVLERYVGLYLPFLDMSFNGATPP+SPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF
Sbjct 241 PNGGVLERYVGLYLPFLDMSFNGATPPNSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF 300
Query 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA
Sbjct 301 MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA 360
Query 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP
Sbjct 361 ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP 420
Query 421 QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA 468
QSALPNTYPYLPSANPGLM NFGQSSVTELSVLSGALGSVARLIPPIA
Sbjct 421 QSALPNTYPYLPSANPGLMINFGQSSVTELSVLSGALGSVARLIPPIA 468
>gi|240168166|ref|ZP_04746825.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=487
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/486 (80%), Positives = 421/486 (87%), Gaps = 19/486 (3%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M VIA PEMLA AA VDGIGSA+ AA +AAGPT +LAAA DEVS+AAAALF YA
Sbjct 1 MPSVIAVPEMLAAAAAGVDGIGSAVSAAGTAAAGPTAHVLAAAGDEVSAAAAALFRAYAH 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGA-------LGSVG- 112
+CQ VL QA AFH EFT+ALAAAGAAYAQAEA+NTAAM+G + GA LG+ G
Sbjct 61 DCQAVLNQAEAFHSEFTQALAAAGAAYAQAEAANTAAMAGALDTLGAPVQALLGLGNTGP 120
Query 113 -----------MLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPE 161
MLSGNP+TAL+MGGTG P VLA +DSAYI+PIFGPNNPVAQYTPE
Sbjct 121 GGAVTTPTSTVMLSGNPVTALIMGGTGYPTFPAPVLAALDSAYIQPIFGPNNPVAQYTPE 180
Query 162 QWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPP 221
QWWPFIG+LSLDQSIAQGVTLLNNGIN ELQNGHDVVVFGYSQSAAVATNEIRALMALPP
Sbjct 181 QWWPFIGHLSLDQSIAQGVTLLNNGINTELQNGHDVVVFGYSQSAAVATNEIRALMALPP 240
Query 222 GQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYD 281
GQ PDPSRLAF +IGNINNPNGG+LERY GLY+PF+D+SF+GATPP+SPYQTY+YTGQYD
Sbjct 241 GQQPDPSRLAFMMIGNINNPNGGILERYTGLYIPFMDVSFDGATPPNSPYQTYIYTGQYD 300
Query 282 GYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQ 341
GYAHNPQYPLNILSD+NAFMGIR VHNAYP TAA+VANAVPLPTSPGYTGNTHYYMFLTQ
Sbjct 301 GYAHNPQYPLNILSDINAFMGIRLVHNAYPVTAADVANAVPLPTSPGYTGNTHYYMFLTQ 360
Query 342 DLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASAL 401
DLPLLQP+R IPF+G P+A LIQPDLRVLVDLGYGYGYADVPTPASLFAP+NP V S L
Sbjct 361 DLPLLQPLRDIPFIGPPLANLIQPDLRVLVDLGYGYGYADVPTPASLFAPVNPFTVISHL 420
Query 402 ATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVA 461
ATG VQGPQAALV IG+LPQS+LP+TYPY+PSANPGL+FNFGQSSVTELS+LSGALGS+A
Sbjct 421 ATGAVQGPQAALVDIGVLPQSSLPDTYPYVPSANPGLVFNFGQSSVTELSLLSGALGSIA 480
Query 462 RLIPPI 467
RLIPP+
Sbjct 481 RLIPPV 486
>gi|289568057|ref|ZP_06448284.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289541810|gb|EFD45459.1| predicted protein [Mycobacterium tuberculosis T17]
Length=315
Score = 633 bits (1632), Expect = 3e-179, Method: Compositional matrix adjust.
Identities = 315/315 (100%), Positives = 315/315 (100%), Gaps = 0/315 (0%)
Query 154 PVAQYTPEQWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEI 213
PVAQYTPEQWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEI
Sbjct 1 PVAQYTPEQWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEI 60
Query 214 RALMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQT 273
RALMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQT
Sbjct 61 RALMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQT 120
Query 274 YMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNT 333
YMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNT
Sbjct 121 YMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNT 180
Query 334 HYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPIN 393
HYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPIN
Sbjct 181 HYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPIN 240
Query 394 PIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVL 453
PIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVL
Sbjct 241 PIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVL 300
Query 454 SGALGSVARLIPPIA 468
SGALGSVARLIPPIA
Sbjct 301 SGALGSVARLIPPIA 315
>gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=495
Score = 480 bits (1236), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 279/497 (57%), Positives = 343/497 (70%), Gaps = 34/497 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+V+ APEM+AT A DV GI SAI A+A+AA P +G+LAAA DEVS+A A LFS Y
Sbjct 1 MSHVLTAPEMVATAATDVAGIRSAISMANAAAAAPVSGVLAAAGDEVSTAIARLFSAYGL 60
Query 61 ECQEVLKQAAAFHGEFT----------------------RALAAAGAAYAQAEASNTAAM 98
E Q V++QAAAFH +FT RA GA A +
Sbjct 61 EYQAVMEQAAAFHADFTAALAAAASAYAEAEAAGAALLSRASNGLGAVNAPIRTLLGSTP 120
Query 99 SGTAGSSGALGSVGMLSG-NPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ 157
+GT GSSGAL S+ L+ +PLTAL+MGGT P+ + I++AYI+P F P
Sbjct 121 AGT-GSSGALASMMKLAAVDPLTALIMGGTDNPLPDPAYVTAINNAYIQPRFPGAVPQGL 179
Query 158 YTPEQWWPFIGNLSLDQSIAQGVTLLNNGINAELQN-GHDVVVFGYSQSAAVATNEIRAL 216
+TPEQ+WP G L+ QS+AQGVTLLN+ I+ ++ G+ VVVFGYSQSAA+ATNEI AL
Sbjct 180 FTPEQFWPITGTLTFGQSVAQGVTLLNSEIDHQINTLGNSVVVFGYSQSAAIATNEINAL 239
Query 217 MALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMY 276
MA AP +L+F L N NNP+GG+L R+ G Y+PFLD+ F GATPP+SPY T MY
Sbjct 240 MA---AGAPYTGQLSFVLASNPNNPDGGILARFPGFYIPFLDVPFTGATPPNSPYPTSMY 296
Query 277 TGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTHY 335
T QY+G A+ PQYPL++LSD+NA MG ++H+ Y TAA+V A+PLPTSPGYTGNT Y
Sbjct 297 TIQYEGVANAPQYPLHVLSDVNAVMGYFYLHDTYQHLTAAQVGGALPLPTSPGYTGNTQY 356
Query 336 YMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGY-----GYADVPTPASLFA 390
YM LTQ+LPL+QPIR IP++G P+A+LIQPDLRVLVDLGYG YA+VPTPA L
Sbjct 357 YMLLTQNLPLVQPIRDIPYLGPPLADLIQPDLRVLVDLGYGNIGVGADYANVPTPARLVQ 416
Query 391 PINPIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTEL 450
I+P +V LA G VQGPQAALV IGLLP S LP+TYPY+PS NPGL +FGQ SVT L
Sbjct 417 LIDPFSVGFNLAKGAVQGPQAALVDIGLLPSSYLPDTYPYVPSLNPGLSVSFGQPSVTGL 476
Query 451 SVLSGALGSVARLIPPI 467
SVLS LGS+ LIPP+
Sbjct 477 SVLSCTLGSILHLIPPV 493
>gi|15839540|ref|NP_334577.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57116697|ref|YP_177698.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659924|ref|YP_001281447.1| PE family protein [Mycobacterium tuberculosis H37Ra]
55 more sequence titles
Length=502
Score = 463 bits (1192), Expect = 3e-128, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 339/501 (68%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS++SG LG++ LIPP
Sbjct 478 QVTLLSLMSGGLGNILHLIPP 498
>gi|289568058|ref|ZP_06448285.1| PE family protein [Mycobacterium tuberculosis T17]
gi|289748636|ref|ZP_06508014.1| PE family protein [Mycobacterium tuberculosis T92]
gi|289756224|ref|ZP_06515602.1| PE family protein [Mycobacterium tuberculosis EAS054]
gi|289541811|gb|EFD45460.1| PE family protein [Mycobacterium tuberculosis T17]
gi|289689223|gb|EFD56652.1| PE family protein [Mycobacterium tuberculosis T92]
gi|289696811|gb|EFD64240.1| PE family protein [Mycobacterium tuberculosis EAS054]
Length=502
Score = 463 bits (1191), Expect = 3e-128, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 340/501 (68%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
G++G+ G + + +P+TAL+MGGT P+ + I++A+I+ +F +
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINNAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS++SG LG++ LIPP
Sbjct 478 QVTLLSLMSGGLGNILHLIPP 498
>gi|254549098|ref|ZP_05139545.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=502
Score = 462 bits (1190), Expect = 4e-128, Method: Compositional matrix adjust.
Identities = 269/501 (54%), Positives = 340/501 (68%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYG-YG----YADVPTPASLF 389
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY YG YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGYYADIPTPAGLF 417
Query 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS++SG LG++ LIPP
Sbjct 478 QVTLLSLMSGGLGNILHLIPP 498
>gi|339630242|ref|YP_004721884.1| PE family protein [Mycobacterium africanum GM041182]
gi|339329598|emb|CCC25234.1| PE family protein [Mycobacterium africanum GM041182]
Length=502
Score = 462 bits (1190), Expect = 5e-128, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 339/501 (68%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS++SG LG++ LIPP
Sbjct 478 QVTLLSLMSGGLGNILHLIPP 498
>gi|31791338|ref|NP_853831.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636072|ref|YP_976295.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988545|ref|YP_002643232.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616923|emb|CAD93029.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491719|emb|CAL70180.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771658|dbj|BAH24464.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600088|emb|CCC62757.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=502
Score = 462 bits (1189), Expect = 6e-128, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 339/501 (68%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRTPLSP 120
Query 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS++SG LG++ LIPP
Sbjct 478 QVTLLSLMSGGLGNILHLIPP 498
>gi|289441535|ref|ZP_06431279.1| PE family protein [Mycobacterium tuberculosis T46]
gi|289414454|gb|EFD11694.1| PE family protein [Mycobacterium tuberculosis T46]
Length=502
Score = 462 bits (1188), Expect = 6e-128, Method: Compositional matrix adjust.
Identities = 267/501 (54%), Positives = 340/501 (68%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
G++G+ G + + +P+TAL+MGGT P+ + I++A+I+ +F +
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINNAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FG+
Sbjct 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGEP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS++SG LG++ LIPP
Sbjct 478 QVTLLSLMSGGLGNILHLIPP 498
>gi|340625197|ref|YP_004743649.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003387|emb|CCC42507.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=502
Score = 461 bits (1187), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 278/501 (56%), Positives = 345/501 (69%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSY++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSYLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------GTA---- 102
E Q V+KQAAAFH EFTR LAAAG AYA AEA+N A +S G A
Sbjct 61 EYQAVVKQAAAFHSEFTRTLAAAGNAYAHAEAANAAWVSHALDTINAPIRTLLGLAPLSP 120
Query 103 -GSSGALG--SVGMLSG-NPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
GSSGA G S+ L+ +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 121 NGSSGAGGLPSIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L G+ VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALGNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 418 SIPNPFAVTYYLIKGSLQAPYGAVVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS++SG LG++ LIPP
Sbjct 478 QVTLLSLMSGGLGNILHLIPP 498
>gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacterium marinum M]
gi|183173740|gb|ACC38850.1| PE family protein [Mycobacterium marinum M]
Length=496
Score = 448 bits (1152), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 264/490 (54%), Positives = 328/490 (67%), Gaps = 31/490 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYVI APEML T A D+DGIGSAI+AASA+ AGPTTG+ AAAADEVS A A LF + +
Sbjct 1 MSYVITAPEMLTTAATDLDGIGSAIKAASAAVAGPTTGVAAAAADEVSGAIAKLFGMFGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAA---------MSGTAGSSGALGSV 111
E Q V+ QA+AF EFTR LA AG +YA EASN + G G++ +
Sbjct 61 EYQSVVAQASAFQTEFTRLLATAGDSYAITEASNALGALNTQAQTLLGGAFGTAAGTSAT 120
Query 112 GMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPF---IG 168
G L+ A +MGGT P + + +I P F +TPEQ WPF +G
Sbjct 121 GPLAAGTHVAFVMGGTAIPWPDATYVTAVQDLFIDPHFPGFTTQVLFTPEQLWPFTSNLG 180
Query 169 NLSLDQSIAQGVTLLNNGINAELQN-GHDVVVFGYSQSAAVATNEIRALMA-LPPGQAPD 226
+L+ QS+AQGV +L + ++A+L + + VVFGYSQSA +ATN+IRA M+ L P P
Sbjct 181 SLTFGQSVAQGVAILRDALSAQLSDPANTAVVFGYSQSATIATNQIRAFMSQLNP---PS 237
Query 227 PSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHN 286
PS+L+F L GN NNP+GGVLER+ GLYLP +D+ FNGATPPDSPY T +YT QYDG A+
Sbjct 238 PSQLSFVLTGNPNNPDGGVLERFNGLYLPIVDVLFNGATPPDSPYPTAIYTAQYDGIANF 297
Query 287 PQYPLNILSDLNAFMGIRWVHNAYPFTAAE---------VANAVPLPTSPGYTGNTHYYM 337
P+YPLN++SD+NA MG + + Y ++ VANAV LPTSPGYTGNT YYM
Sbjct 298 PRYPLNVVSDVNAIMGFLYDEHYYAGLTSDPNAIGSGPTVANAVQLPTSPGYTGNTEYYM 357
Query 338 FLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLFAPI 392
L Q LPL P+R IP+VGTPIA+LIQP LRV+VDLGY G YAD+PTPASLF+
Sbjct 358 VLGQHLPLTDPLRQIPYVGTPIADLIQPSLRVIVDLGYSDYGPGQNYADIPTPASLFSLP 417
Query 393 NPIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSV 452
NP+AV+ L G VQG QA +V G LPQS LP+TYPY+ S +PGL GQ SVT LS+
Sbjct 418 NPLAVSYYLGKGAVQGVQAFMVDEGWLPQSYLPDTYPYVASLSPGLNVYLGQPSVTGLSL 477
Query 453 LSGALGSVAR 462
L+GALG+ AR
Sbjct 478 LTGALGTAAR 487
>gi|240168173|ref|ZP_04746832.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=502
Score = 446 bits (1147), Expect = 4e-123, Method: Compositional matrix adjust.
Identities = 273/501 (55%), Positives = 335/501 (67%), Gaps = 38/501 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYV AAPE+LA+ AADVDGI +AI AAS +AAGPT+ LLAAA DEVS+A AALF+ YA+
Sbjct 1 MSYVFAAPELLASAAADVDGIAAAIGAASVAAAGPTSNLLAAAGDEVSAATAALFNAYAQ 60
Query 61 ECQEVLKQAAAFHGEFTRAL-------------AAAGAAYAQAEASNTAAMSGTAGSSGA 107
E Q V++QAAAF EFTR L AA A A + A + TA
Sbjct 61 EYQAVVRQAAAFQQEFTRTLAVAAGAYAQAEAANAALLNGALNGALSNARTAVTAPIQSL 120
Query 108 LGSVGMLSGNP--LT---------ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVA 156
L S G+ +G P LT AL+MGGTG P + L I+ YI+ +F P A
Sbjct 121 LTSAGVGTGGPSALTAVPAAASQIALIMGGTGNPDPDPKYLNRINVKYIQHLFPGAIPKA 180
Query 157 QYTPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEI 213
+TPEQ+WP +GN++ +QS+AQGVT LNN INA++ G+ VV FGYSQSA + NEI
Sbjct 181 LFTPEQFWPVTPQLGNMTFNQSVAQGVTALNNAINAQIALGNKVVAFGYSQSATIVNNEI 240
Query 214 RALMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQT 273
AL++ AP + ++F +IGN N P+GG+L R+ G Y+PFLD+ FNGATPP+SPY T
Sbjct 241 NALIS---AGAPHANDISFVMIGNPNTPDGGILSRFPGFYIPFLDVPFNGATPPNSPYAT 297
Query 274 YMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGN 332
+YT QYDG A+ P+YPLNILSD+NAFMG +VHN YP +A+E+ANAVPLPTSPGY GN
Sbjct 298 TIYTAQYDGIANAPRYPLNILSDINAFMGYFYVHNTYPTLSASEIANAVPLPTSPGYAGN 357
Query 333 THYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLG---YGYGYADVPTPASLF 389
T YYM LTQDLPL+QPIR IP+ G PIA+L QP LRVLVDLG YG YA+VPTPA L
Sbjct 358 TQYYMLLTQDLPLVQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPNYANVPTPAGLL 417
Query 390 APINPIAVASALATGTVQGPQAALVSIGL----LPQSALPNTYPYLPSANPGLMFNFGQS 445
+ NP AV LA G++Q P AA V IG+ P YP++PS NPGL F GQ
Sbjct 418 SIPNPFAVGYYLALGSLQAPYAAAVEIGVEAGFWGPEWFPQAYPWIPSINPGLHFYIGQP 477
Query 446 SVTELSVLSGALGSVARLIPP 466
VT LS+ SG LGS+ LIPP
Sbjct 478 EVTLLSLASGGLGSLLHLIPP 498
>gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobacterium marinum M]
gi|183173741|gb|ACC38851.1| PE family protein, PE4 [Mycobacterium marinum M]
Length=505
Score = 440 bits (1131), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 272/506 (54%), Positives = 344/506 (68%), Gaps = 45/506 (8%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYV+ AP++LA+ A DVDGI + ++ A+++AA PT+GLLAAA DEVS+A A +FS Y +
Sbjct 1 MSYVLTAPDLLASAATDVDGIAATLQVANSAAAAPTSGLLAAAQDEVSAAIAKVFSAYGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSV--------- 111
E Q + QA+AFH EFTRALAAAGAAYAQAEA+N + + TAG S AL ++
Sbjct 61 EYQAAIAQASAFHTEFTRALAAAGAAYAQAEAANASLI--TAGVSDALTAITTPIQSLLG 118
Query 112 -------------------GMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPN 152
L +P+ AL+MGGT P+ ++ I++ YI+P+F
Sbjct 119 PAAIGTGGAGSAGALTAVSSTLMADPVVALIMGGTSVPLPGPGYVSDINNNYIQPLFSGA 178
Query 153 NPVAQYTPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVA 209
P A +TPEQ+WP +GNL+ +QS+AQGVTLLN+ IN +L G+ VV FGYSQSA +
Sbjct 179 IPQALFTPEQFWPVTPGLGNLTFNQSVAQGVTLLNDAINTQLALGNKVVAFGYSQSATIV 238
Query 210 TNEIRALMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDS 269
NEI ALMA+ G APDP L+F ++G NNP+GG+L R+ G Y+PFLD+SFNGATP +
Sbjct 239 NNEILALMAMGTG-APDPGDLSFIMVGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAAN 297
Query 270 PYQTYMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGY 329
PY T ++T QYDG AH PQYPLNILSD+NA MG +VH YP + A+ LPTSPGY
Sbjct 298 PYPTSIFTAQYDGIAHAPQYPLNILSDINAIMGYFYVHGNYPDLMS--GQAIQLPTSPGY 355
Query 330 TGNTHYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPT 384
TGNT YYM+LTQDLPL+QPIR IP+ G P+A+LIQP LRVLVDLGY G YADVPT
Sbjct 356 TGNTDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGLSYADVPT 415
Query 385 PASLFAPINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMF 440
PA L + NP AV+ L G++Q P A V I GLL + P+TYP++PS NPGL F
Sbjct 416 PAGLLSVPNPFAVSYYLLKGSLQAPYGAAVEIGVEAGLLGPESFPDTYPWVPSLNPGLNF 475
Query 441 NFGQSSVTELSVLSGALGSVARLIPP 466
GQ SVT LS+LSG LG + LIPP
Sbjct 476 YLGQPSVTLLSLLSGGLGDIFHLIPP 501
>gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118568885|gb|ABL03636.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=505
Score = 433 bits (1113), Expect = 3e-119, Method: Compositional matrix adjust.
Identities = 270/506 (54%), Positives = 342/506 (68%), Gaps = 45/506 (8%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYV+ AP++LA+ A DVDGI + ++ A+++AA T+GLLAAA DEVS+A A +FS Y +
Sbjct 1 MSYVLTAPDLLASAATDVDGIAATLQVANSAAAALTSGLLAAAQDEVSAAIAKVFSAYGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSV--------- 111
E Q + QA+AFH EFTRALAAAGAAYAQAEA+N + + TAG S AL ++
Sbjct 61 EYQAAIAQASAFHTEFTRALAAAGAAYAQAEAANASLI--TAGVSDALTAITTPIQSLLG 118
Query 112 -------------------GMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPN 152
L +P+ AL+MGGT P+ ++ I++ YI+P+F
Sbjct 119 PAAIGTGGAGSAGALTAVSSTLMADPVVALIMGGTSVPLPGPGYVSDINNNYIQPLFSGA 178
Query 153 NPVAQYTPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVA 209
P A +TPEQ+WP +GNL+ +QS+AQGVTLLN+ IN +L G+ VV FGYSQSA +
Sbjct 179 IPQALFTPEQFWPVTPGLGNLTFNQSVAQGVTLLNDAINTQLALGNKVVAFGYSQSATIV 238
Query 210 TNEIRALMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDS 269
NEI ALMA+ G APDP L+F ++G NNP+GG+L R+ G Y+PFLD+SFNGATP +
Sbjct 239 NNEILALMAMGTG-APDPGDLSFIMVGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAAN 297
Query 270 PYQTYMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGY 329
PY T ++T QYDG AH PQY LNILSD+NA MG +VH YP + A+ LPTSPGY
Sbjct 298 PYPTSIFTAQYDGIAHAPQYRLNILSDINAIMGYFYVHGNYPDLMS--GQAIQLPTSPGY 355
Query 330 TGNTHYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPT 384
TGNT YYM+LTQDLPL+QPIR IP+ G P+A+LIQP LRVLVDLGY G YADVPT
Sbjct 356 TGNTDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGLSYADVPT 415
Query 385 PASLFAPINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMF 440
PA L + NP AV+ L G++Q P A V I GLL + P+TYP++PS NPGL F
Sbjct 416 PAGLLSVPNPFAVSYYLLKGSLQAPYGAAVEIGVEAGLLGPESFPDTYPWVPSLNPGLNF 475
Query 441 NFGQSSVTELSVLSGALGSVARLIPP 466
GQ SVT LS+LSG LG + LIPP
Sbjct 476 YLGQPSVTLLSLLSGGLGDIFHLIPP 501
>gi|240168172|ref|ZP_04746831.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=493
Score = 416 bits (1068), Expect = 6e-114, Method: Compositional matrix adjust.
Identities = 264/492 (54%), Positives = 328/492 (67%), Gaps = 28/492 (5%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSY++ APEM++ A D+DGI +A+ AA+A+AAGPTTGLLAAA DEVS A A LF + +
Sbjct 1 MSYLLTAPEMVSAAATDLDGIAAALYAANAAAAGPTTGLLAAAEDEVSRAVATLFGAFGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQA--EASNTAAMSGTA-----------GSSGA 107
E Q V+ AAAFH EFTRALAAA +AYAQA ASN + GT G +GA
Sbjct 61 EYQAVVTHAAAFHTEFTRALAAAASAYAQAEATASNALSAFGTQVQTLLTPLLPNGGAGA 120
Query 108 LGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPF- 166
+ + S A +MGGTG P + + +I+P F A +TPEQ+WP
Sbjct 121 INPPSITSLGTQVAFIMGGTGIPDPDAMYVTGAQTLFIQPRFPGYLSNALHTPEQFWPTT 180
Query 167 --IGNLSLDQSIAQGVTLLNNGINAELQN-GHDVVVFGYSQSAAVATNEIRALMALPPGQ 223
+GNL+ +S+A+GV +L+N + +L G+ VV+GYSQSAA+AT EIR LMA
Sbjct 181 PNLGNLTFGRSVAEGVAILSNALTTQLSTAGNSAVVYGYSQSAAIATIEIRHLMAQ--VT 238
Query 224 APDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGY 283
P PS L F L GN NNPNGGVL+R+ GLY+P LD+ FNGATPPDSPY T +YT QYDG
Sbjct 239 PPSPSDLGFVLTGNPNNPNGGVLQRFTGLYVPVLDVLFNGATPPDSPYPTVIYTNQYDGT 298
Query 284 AHNPQYPLNILSDLNAFMGI-RWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQD 342
+ PQYPLN+L+DLNA +GI H +VANAV LPTSPGY+GNT Y++ LTQ
Sbjct 299 GNFPQYPLNLLADLNAVIGIVDGTHYYVGLPPDQVANAVHLPTSPGYSGNTEYFLGLTQK 358
Query 343 LPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLFAPINPIAV 397
LPL IR IP+VGTP+AEL+QPDLRVLVDLGY G YAD+PTPAS + NP AV
Sbjct 359 LPLTSLIRPIPYVGTPLAELVQPDLRVLVDLGYSDYGPGLSYADIPTPASFLSVPNPFAV 418
Query 398 ASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGAL 457
+ LA G VQG Q+++VS+G LP S +P YPY PS PGL F GQ SVT LS+L+GAL
Sbjct 419 SYYLAKGAVQGVQSSMVSLGWLPPSYIPTGYPYAPSVAPGLNFFVGQPSVTGLSLLTGAL 478
Query 458 GSVAR---LIPP 466
G+ A+ IPP
Sbjct 479 GTAAKDLGWIPP 490
>gi|183980413|ref|YP_001848704.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173739|gb|ACC38849.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=493
Score = 414 bits (1063), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 247/493 (51%), Positives = 316/493 (65%), Gaps = 29/493 (5%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYV PE L+T AAD+ GIGSA+ AS++AAGPTT LLAAAADEVS+ + +F Y
Sbjct 1 MSYVRTIPEFLSTAAADIGGIGSALTDASSAAAGPTTNLLAAAADEVSAVVSKVFGGYGL 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAG------------SSGAL 108
Q VL QA+AFH EFT LA AG YAQAE N A++ G S +
Sbjct 61 SAQAVLTQASAFHDEFTELLANAGGIYAQAEVDNAEALTNAVGEFSEPFIQLWDPSYTYV 120
Query 109 GSVGMLSGNP------LT---ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYT 159
GS NP LT AL+MGGT +P + I++A+I+P F V
Sbjct 121 GSNIATGPNPQPNEPSLTPEFALIMGGTFDPQPFPLYVTTINNAFIQPFFPGATSVGLSY 180
Query 160 PEQWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMAL 219
P Q+WP L+L+QS+A+GV LNN ++ ++ G V+ FG+SQSA VAT E++ LMAL
Sbjct 181 PAQFWPLTSGLTLNQSVAEGVIDLNNALSVQINGGQHVINFGFSQSAVVATQEMQRLMAL 240
Query 220 PPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQ 279
P G PDPS L+F L GN PNGG+ R+ G+++PF+D++F TPPD+PY T +Y Q
Sbjct 241 PVGMRPDPSDLSFVLAGNPATPNGGIFTRFPGMHIPFVDLTFTSPTPPDTPYPTTIYATQ 300
Query 280 YDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFL 339
YD + P+YPLNILSDLN M + H YP +V+NAV LPTSP YTGNT YYMF+
Sbjct 301 YDPTSDFPRYPLNILSDLNTLMSLGQ-HELYP--NLDVSNAVQLPTSPDYTGNTTYYMFM 357
Query 340 TQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLFAPINP 394
T++LPLL+P+RAIPF+G PIA+ IQPDLRVLVDLGY G YA+VPTPA+LF NP
Sbjct 358 TKNLPLLEPVRAIPFIGNPIADFIQPDLRVLVDLGYSDWGSGQDYANVPTPATLFPIPNP 417
Query 395 IAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLS 454
+ + L G V G A V +GLLP SALPN YPYLPS + L F GQ VT++S+++
Sbjct 418 FVIGTDLVIGAVHGSTALAVDLGLLPASALPNAYPYLPSLDTDLNFFLGQPGVTDISLVT 477
Query 455 GALGSVARLIPPI 467
A+G V + +P I
Sbjct 478 NAIGPVLQRLPAI 490
>gi|240168171|ref|ZP_04746830.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=489
Score = 394 bits (1011), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 252/492 (52%), Positives = 326/492 (67%), Gaps = 29/492 (5%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M+++IAAPEM+ + A + IGSAI AA A+AAG TT +LAAAADEVS+A A LF Y +
Sbjct 1 MTHLIAAPEMMVSAATNAVKIGSAISAAGAAAAGSTTNVLAAAADEVSAAIAKLFGTYGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSG-----------------TAG 103
E Q L QAAAFH EF +ALA A YAQAEA+NT A+S G
Sbjct 61 ELQAALTQAAAFHDEFVQALAGAATTYAQAEAANTCAVSNAFNALLAPIENLLAPPPVNG 120
Query 104 SSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQW 163
++ S + G+ AL+MGGT +P + I+ AYI+ +F N P Q+
Sbjct 121 ATTPTPSAPLPLGS-TVALIMGGTFDPQPFPVYVTTINGAYIQFLFPGANAAGLTYPAQF 179
Query 164 WPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALP 220
WP +GNL++++SIAQGV LNN I ++L H+V+ FG+SQS+ VATNE+ ALM LP
Sbjct 180 WPLTLNLGNLTINESIAQGVVDLNNAITSQLNASHNVIDFGFSQSSVVATNEMYALMNLP 239
Query 221 PGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQY 280
PGQ PDPS+L+F L GN PNGG+ R+ G ++P LD++F TPP+SPY T ++ QY
Sbjct 240 PGQRPDPSQLSFVLAGNPATPNGGIFTRFPGFHIPVLDLTFTPDTPPNSPYPTKIFATQY 299
Query 281 DGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLT 340
D + PQ+PLN L+DLNA M H+ YP + +AV LPTSPGY GNT YYMF+T
Sbjct 300 DPTSDFPQFPLNFLADLNAIMSTGQ-HDLYP--NLDPNDAVALPTSPGYNGNTQYYMFMT 356
Query 341 QDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLFAPINPI 395
++LPLL+P+RAIPF+G P+A+LIQPDLRVLVDLGY G YA++ TPASLF +P+
Sbjct 357 RNLPLLEPLRAIPFIGRPLADLIQPDLRVLVDLGYTDWGSGQDYANIATPASLFGIPDPL 416
Query 396 AVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSG 455
V + LA G V+G QAALV IGLLPQSALPN YPYLPS + L F GQ + T +S+ +
Sbjct 417 VVGTDLARGAVEGTQAALVDIGLLPQSALPNAYPYLPSLDTNLNFFLGQPTDTTISLFTR 476
Query 456 ALGSVARLIPPI 467
A+G + LIPPI
Sbjct 477 AVGPLLDLIPPI 488
>gi|240168170|ref|ZP_04746829.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=511
Score = 373 bits (958), Expect = 3e-101, Method: Compositional matrix adjust.
Identities = 253/492 (52%), Positives = 322/492 (66%), Gaps = 28/492 (5%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M+++IAAPEM+ + A IGS+I AA A+AAG TT +LAAAADEVS+A A LF Y +
Sbjct 1 MTHLIAAPEMMVSAATSAVKIGSSISAAGAAAAGSTTNVLAAAADEVSAAIAKLFGTYGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGA------------- 107
+ Q L QA AFH EF + LA A YAQAEA+N AA++ G A
Sbjct 61 QLQAALTQATAFHDEFVQTLAGAATTYAQAEAANAAAVANALGGLNAQVQSLLAPAVGNA 120
Query 108 ----LGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQW 163
AL+MGGT +P +++I+S+YI+P F NP P Q
Sbjct 121 TTAPTVMAAAAPAASAVALVMGGTFDPEPFPLYVSLINSSYIKPFFPGANPTGVSYPAQL 180
Query 164 WP---FIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALP 220
WP F GNL+L++S+AQG+T L N I +++ G+ VV FG+SQSA V+TN I LMALP
Sbjct 181 WPLTIFQGNLTLNESVAQGMTDLTNAIYSQIGAGNTVVNFGFSQSAVVSTNVITQLMALP 240
Query 221 PGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQY 280
PG PDPS+L+F L GN PNGG R+ G+ +P+LD++F ATPPDSPY T +Y QY
Sbjct 241 PGMRPDPSQLSFVLAGNPATPNGGFFTRFPGITIPWLDITFTEATPPDSPYPTTIYATQY 300
Query 281 DGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLT 340
D + P+YPLN+L+DLNA M H YP +V +AVPLPTSPGY GNT YYMF+T
Sbjct 301 DPASDFPRYPLNLLADLNALMSTGR-HELYP--NLDVNDAVPLPTSPGYNGNTQYYMFMT 357
Query 341 QDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLFAPINPI 395
+DLPLL P+RAIPFVG P+AELIQPDLRVLVDLGY G YA+V TPASLF+ +P
Sbjct 358 KDLPLLDPLRAIPFVGEPLAELIQPDLRVLVDLGYSDWGNGQDYANVVTPASLFSIPDPF 417
Query 396 AVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSG 455
V L GTV+G QA+LV +G+LPQSALPN YPYLP + + F GQ +VT++SVL+
Sbjct 418 VVGRELVDGTVKGVQASLVELGVLPQSALPNEYPYLPDLDTDVNFYVGQPTVTDISVLTR 477
Query 456 ALGSVARLIPPI 467
A+G + +IPPI
Sbjct 478 AVGPLLDMIPPI 489
>gi|289764277|ref|ZP_06523655.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289711783|gb|EFD75799.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=374
Score = 372 bits (955), Expect = 7e-101, Method: Compositional matrix adjust.
Identities = 198/363 (55%), Positives = 253/363 (70%), Gaps = 16/363 (4%)
Query 117 NPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPF---IGNLSLD 173
+P+TAL+MGGT P+ + I+ A+I+ +F +TPEQ+WP +GNL+ +
Sbjct 11 SPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFN 70
Query 174 QSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFT 233
QS+ +GV LLN +N +L + VV FGYSQSA + N I +LMA+ +P+P ++F
Sbjct 71 QSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINSLMAM---GSPNPDDISFV 127
Query 234 LIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNI 293
+IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++YT QYDG AH PQ+PL I
Sbjct 128 MIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRI 187
Query 294 LSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAI 352
LSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT YYMFLTQDLPLLQPIR I
Sbjct 188 LSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDI 247
Query 353 PFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLFAPINPIAVASALATGTVQ 407
P+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF+ NP AV L G++Q
Sbjct 248 PYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQ 307
Query 408 GPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARL 463
P A+V I GL+ P++YP++PS NPGL F FGQ VT LS++SG LG++ L
Sbjct 308 APYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILHL 367
Query 464 IPP 466
IPP
Sbjct 368 IPP 370
>gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacterium marinum M]
gi|183173727|gb|ACC38837.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 217/428 (51%), Positives = 286/428 (67%), Gaps = 24/428 (5%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSY++A PE+LA+ A ++DGIGSAI A +AAGPT+ LLAAA DEVS A A LFS Y R
Sbjct 1 MSYLLAEPELLASVATEIDGIGSAISTAGTAAAGPTSSLLAAAGDEVSGAIANLFSVYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNP-- 118
ECQ VL Q AF EF + LAAAG AYAQ EA++ AA+ G G A +V S P
Sbjct 61 ECQAVLAQVEAFRSEFAQTLAAAGVAYAQTEAASLAALRGALGIPSAAPAVSSASTIPPF 120
Query 119 ---LTALMMGGTGEPILSDRVLAIIDSAYIRP--IFGPNNPVAQYTPEQWWPFIG--NLS 171
LT+L +G TG PI + + ++ ++R I P YTPE+ +P G +L+
Sbjct 121 TANLTSLFLGPTGVPIPDESYVQAANNLFVRSSDILRP-----LYTPEELYPLTGVKSLT 175
Query 172 LDQSIAQGVTLLNNGINAELQ-NGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
L+ S+ +G+T+L+N I A+L G+ V VFGYSQSA +A+ E++ L AL P AP S+L
Sbjct 176 LNASVEEGLTILDNAIMAQLSIPGNSVTVFGYSQSAIIASLEMQKLAALGP-SAPTASQL 234
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F L+GN NPNGG+L R+ L LP L ++F GATP D+ Y T +YT +YDG+A P+YP
Sbjct 235 NFVLVGNEMNPNGGMLARFPDLSLPSLGLTFYGATPSDTIYPTAIYTLEYDGFADFPRYP 294
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN ++DLNA MGI +VH Y TAA+V +A+ LPTSPGY+G T YY+ T++LPLL+P+
Sbjct 295 LNFIADLNAVMGIPFVHVKYLDLTAAQVDSAIELPTSPGYSGVTSYYVIPTENLPLLEPL 354
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YG----YADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A LIQPDL+V+V+LGYG YG YADV TP LF ++P + ALA
Sbjct 355 RAIPVIGNPLANLIQPDLKVIVNLGYGDPNYGYSTSYADVRTPFGLFPDVSPGTIVDALA 414
Query 403 TGTVQGPQ 410
GT +G Q
Sbjct 415 AGTQEGIQ 422
>gi|289572740|ref|ZP_06452967.1| PE family protein [Mycobacterium tuberculosis K85]
gi|289537171|gb|EFD41749.1| PE family protein [Mycobacterium tuberculosis K85]
Length=369
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/372 (54%), Positives = 253/372 (69%), Gaps = 29/372 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 335 YYMFLTQDLPLL 346
YYMFLTQDLPLL
Sbjct 358 YYMFLTQDLPLL 369
>gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacterium marinum M]
gi|183173728|gb|ACC38838.1| PE family protein [Mycobacterium marinum M]
Length=582
Score = 325 bits (833), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 213/466 (46%), Positives = 285/466 (62%), Gaps = 32/466 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M+YV PE + T AAD++GIGS I AASA+AAGPT+ L++AAADEVS+A A LF Y +
Sbjct 1 MTYVFVEPETITTMAADLEGIGSTIDAASAAAAGPTSRLVSAAADEVSTAIAGLFGGYGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGN--- 117
+ Q V+ AAAFH +FT+ +AAAG AYAQ EAS+ AA+S + G + GN
Sbjct 61 QYQAVVAHAAAFHQQFTQTVAAAGLAYAQTEASSVAAISNALEAFGTQAHSLLGGGNAAA 120
Query 118 ---------------PLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQ 162
P +L+MGG+G P+ LA + YI P FG A +TPEQ
Sbjct 121 SATPSASITTTPLTGPTVSLVMGGSGNPLPGPDYLADFFN-YITPQFGVTTSQALFTPEQ 179
Query 163 WWPFIG--NLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALP 220
+P G +L L S++QGV +L+N I ++ G+ VVV GYSQSA +A+ E++ L A+P
Sbjct 180 LYPLTGEKSLPLAISVSQGVQILHNAILGQIAEGNSVVVGGYSQSAIIASLEMQNLAAMP 239
Query 221 PGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQY 280
PG AP +L F L+ N NPNGG+L R+ GL LP L + F G+TP D+ Y T +YT +Y
Sbjct 240 PGTAPTADQLGFLLLANPMNPNGGLLSRFAGLTLPSLGVDFYGSTPADTIYPTSIYTHEY 299
Query 281 DGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEV---ANAVPLPTSPGYTGNTHYYM 337
DG+A P+YPLNI+SDLNA GI +VH P E + + L TS YTGNT YY+
Sbjct 300 DGFADFPRYPLNIVSDLNAIAGIAFVHTDTPTINPETLPPGDLIKLDTSADYTGNTSYYL 359
Query 338 FLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFA 390
T+ LPLL+P+R IP VG P+A+L+QPDL +V+LGYG YGY A++ TP LF
Sbjct 360 IHTERLPLLEPLRFIPVVGNPLADLLQPDLTTIVNLGYGDPRYGYSTAPANIETPFGLFP 419
Query 391 PINPIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANP 436
++P VA L GT QG +A + + PQ + P +L NP
Sbjct 420 EVDPKVVAQQLVIGTQQGFHSAAHDL-VAPQPSPPTPRLFLDIPNP 464
>gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=560
Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 218/449 (49%), Positives = 284/449 (64%), Gaps = 27/449 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M YV+A P+M+AT AAD++ IG A+ +ASA+AAGPT+ L AAAADEVS+A A LF Y R
Sbjct 1 MPYVLADPQMMATAAADLERIGVAVGSASAAAAGPTSSLAAAAADEVSAAIANLFGAYGR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
E Q ++ AF EF R LAAAG YAQ+EA+N A +S + +S G P
Sbjct 61 EYQAIVNLLKAFQAEFARTLAAAGLVYAQSEATNAATVSASITASPLTG--------PTV 112
Query 121 ALMMGGTGEPILS-DRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIA 177
+L+MGG+G P D V +++ YI P FG N A +TPEQ +P G +L L S++
Sbjct 113 SLIMGGSGNPTPGIDYVNDLLN--YISPQFGATNAQALFTPEQLYPLTGEKSLPLTTSVS 170
Query 178 QGVTLLNNGINAELQN-GHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIG 236
QGV +L+N I +E+ G+ VVV GYSQSA +A+ E+R L A+PPG AP RL F L+
Sbjct 171 QGVQILHNAILSEVNTLGNSVVVGGYSQSAIIASLEMRNLAAMPPGTAPPADRLGFVLLA 230
Query 237 NINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSD 296
N NPNGG+L R+ GL LP L + F GATP D+ Y T +YT +YDG+A P+YPLNI+SD
Sbjct 231 NPMNPNGGLLSRFAGLSLPSLGVEFFGATPADTIYPTSIYTHEYDGFADFPRYPLNIVSD 290
Query 297 LNAFMGIRWVHNAYPFTAAEV---ANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIP 353
LNA GI +VH P + + + LPT P Y GNT YY+ T LPLL P+R IP
Sbjct 291 LNAIAGIAFVHTDTPEINPQTLPPGDLIKLPTEPTYNGNTSYYIIRTHHLPLLTPLRFIP 350
Query 354 FVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALATGTV 406
+G P+A+L++P+L +V+LGYG YGY A+VPTP LF ++P VA L TGT
Sbjct 351 VLGNPLADLVEPNLTTIVNLGYGDPRYGYSTAPANVPTPFGLFPEVDPAVVAGELVTGTQ 410
Query 407 QGPQAALVSI-GLLPQSALPNTYPYLPSA 434
QG AA+ I G PQ P T P L S+
Sbjct 411 QGFNAAVNDILGQGPQG--PPTVPSLGSS 437
>gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|254233542|ref|ZP_04926868.1| PE family protein [Mycobacterium tuberculosis C]
gi|254366603|ref|ZP_04982647.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|13879644|gb|AAK44384.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|124603335|gb|EAY61610.1| PE family protein [Mycobacterium tuberculosis C]
gi|134152115|gb|EBA44160.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323717137|gb|EGB26346.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=588
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 280/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAATNAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 157
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 158 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 213
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 214 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 272
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 273 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 331
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD+NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 332 LNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 389
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 390 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 449
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 450 AGTQQGVNDFMVELPAALNTLPQTPMP 476
>gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacterium marinum M]
gi|183176742|gb|ACC41852.1| PE family protein [Mycobacterium marinum M]
Length=549
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 201/423 (48%), Positives = 273/423 (65%), Gaps = 19/423 (4%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M++++A P+++AT A V+ IGSAI A+ AAG +G+ AAA DEVS+A A+ F+ + +
Sbjct 1 MAFLVAEPQVMATVAGQVEEIGSAIGVANEFAAGSISGVAAAAGDEVSAAIASFFAAHGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAG----SSGALGSVGMLSG 116
Q V Q AFH EF +ALA AG AY QAEA+ AA++G G S+ A +
Sbjct 61 AYQAVAGQVEAFHTEFQQALAQAGNAYVQAEAAGAAALAGALGVPATSAAAPAATIPPFP 120
Query 117 NPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQ 174
LT L+MGGTG PI + + + Y+R N + TPE+ +P G +L+LD
Sbjct 121 ANLTTLVMGGTGIPIPGPGFINLANELYVR---SANALLGLNTPEELYPLTGTKSLTLDA 177
Query 175 SIAQGVTLLNNGINAELQ-NGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFT 233
S+++G+T+L+N I +L G+ V VFG SQSA +A+ E++ L AL P AP S+L F
Sbjct 178 SVSEGLTILDNAIMEQLAIPGNTVTVFGVSQSAVIASLEMQKLAALGPA-APTASQLNFV 236
Query 234 LIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNI 293
L+GN NPNGG+L R+ L +P L ++F G TP D+ Y T YT +YDG+A P+YPLN
Sbjct 237 LLGNEMNPNGGLLARFPDLSIPSLGLTFYGGTPSDTIYPTANYTLEYDGFADFPRYPLNF 296
Query 294 LSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAI 352
+SDLNA MGI +VH Y T A+V NA+PL TSPGY+G T YY+ T++LPLL+P+RAI
Sbjct 297 ISDLNAVMGIVYVHPTYLDLTQAQVDNAIPLATSPGYSGVTSYYILPTENLPLLEPLRAI 356
Query 353 PFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALATGT 405
P +G P+A LIQPDL+VLV+LGYG YGY AD+ TP LF + P +A AL GT
Sbjct 357 PVIGNPLANLIQPDLKVLVNLGYGDPAYGYSTSPADITTPFGLFPDVPPHVIADALVAGT 416
Query 406 VQG 408
QG
Sbjct 417 KQG 419
>gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552402|ref|ZP_06441612.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|297632625|ref|ZP_06950405.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
6 more sequence titles
Length=588
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 280/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAAKAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 157
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 158 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 213
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 214 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 272
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 273 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 331
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD+NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 332 LNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 389
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 390 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 449
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 450 AGTQQGVNDFMVELPAALNTLPQTPMP 476
>gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium tuberculosis SUMu001]
gi|308379707|ref|ZP_07487233.2| PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308380909|ref|ZP_07491451.2| PE family protein [Mycobacterium tuberculosis SUMu011]
7 more sequence titles
Length=560
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 280/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 11 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 70
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 71 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 129
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 130 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 185
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 186 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 244
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 245 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 303
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD+NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 304 LNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 361
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 362 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 421
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 422 AGTQQGVNDFMVELPAALNTLPQTPMP 448
>gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636063|ref|YP_976286.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988536|ref|YP_002643223.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616914|emb|CAD93020.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491710|emb|CAL70171.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771649|dbj|BAH24455.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600079|emb|CCC62748.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=588
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 280/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 157
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 158 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 213
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 214 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 272
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 273 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 331
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD+NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 332 LNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 389
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 390 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 449
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 450 AGTQQGVNDFMVELPAALNTLPQTPMP 476
>gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339630233|ref|YP_004721875.1| PE family protein [Mycobacterium africanum GM041182]
gi|289537161|gb|EFD41739.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339329589|emb|CCC25225.1| PE family protein [Mycobacterium africanum GM041182]
Length=588
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 280/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 157
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 158 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 213
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 214 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 272
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 273 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 331
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD+NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 332 LNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 389
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 390 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 449
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 450 AGTQQGVNDFMVELPAALNTLPQTPMP 476
>gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659915|ref|YP_001281438.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|148821343|ref|YP_001286097.1| PE family protein [Mycobacterium tuberculosis F11]
25 more sequence titles
Length=588
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 280/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 157
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 158 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 213
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 214 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 272
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 273 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 331
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD+NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 332 LNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 389
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 390 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 449
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 450 AGTQQGVNDFMVELPAALNTLPQTPMP 476
>gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308370327|ref|ZP_07421092.2| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308371602|ref|ZP_07425459.2| PE family protein [Mycobacterium tuberculosis SUMu004]
9 more sequence titles
Length=560
Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 279/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 11 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 70
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 71 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 129
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 130 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 185
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 186 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 244
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 245 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 303
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 304 LNVLSDSNAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 361
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 362 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 421
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 422 AGTQQGVNDFMVELPAALNTLPQTPMP 448
>gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|306970340|ref|ZP_07483001.1| PE family protein [Mycobacterium tuberculosis SUMu009]
gi|308347554|gb|EFP36405.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308352180|gb|EFP41031.1| PE family protein [Mycobacterium tuberculosis SUMu009]
Length=588
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 207/447 (47%), Positives = 279/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+ A PTTGL AAAADEVS+A A LF Y +
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT+A+ A ++G M
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEA-TAGLFKPTSPPVLPPMF 157
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + + I + +I P+ +NPV + TPE+ +P G +L
Sbjct 158 NQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVV--SNPVVKALVTPEELYPITGVKSL 213
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 214 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 272
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 273 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 331
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 332 LNVLSDSNAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 389
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 390 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 449
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 450 AGTQQGVNDFMVELPAALNTLPQTPMP 476
>gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [Mycobacterium kansasii ATCC 12478]
Length=580
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 203/434 (47%), Positives = 272/434 (63%), Gaps = 18/434 (4%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++A P+M+A+ A+DV IG+AI AA+ +AA TT LLAA ADEVS AALF +AR
Sbjct 1 MSFLVAEPDMMASAASDVARIGAAISAANDAAAATTTQLLAAGADEVSQGIAALFGAFAR 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
+ Q V Q AA+H RAL A AY AEA+N + + VG G T
Sbjct 61 DYQAVSAQIAAYHDHVVRALGAGAEAYTGAEAANRTLLQPLPNRT-----VGAPGGGGPT 115
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPV-AQYTPEQWWPFIG--NLSLDQSIA 177
L+MG TG P S R L + + YIRP + P +PV TPEQ+ PF G +L+ D+S+A
Sbjct 116 VLIMGPTGNPGPSFRYLQQVYNLYIRPFY-PGSPVLGVTTPEQFQPFTGIPSLTFDESVA 174
Query 178 QGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGN 237
G L+ I A+ GHDVVV G+SQSA+VAT E+R L +LP P P +L+F L+G+
Sbjct 175 AGAADLHAAIMAQHAAGHDVVVLGFSQSASVATAEMRYLASLPADLRPGPDQLSFVLLGD 234
Query 238 INNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDL 297
NNPNGG+L R+ GL++ + ++F+GATP + Y T +YT QYDG+A PQYPLNI +DL
Sbjct 235 PNNPNGGLLARFPGLFVQPMGLTFSGATPSNL-YPTTVYTRQYDGFADFPQYPLNIPADL 293
Query 298 NAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVG 356
NA +GI + H Y T A+VA V P SP T Y + ++ LPLL+P+R I V
Sbjct 294 NALLGIYYAHGTYQELTPAQVAAGVVQPVSPADVYTT-YMLLPSEHLPLLEPLRGI--VP 350
Query 357 TPIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAVASALATGTVQGPQAALV 414
P+ +L++PDLRV+++LGY GYADVPTPA LF I+ + +A LA T G AL
Sbjct 351 APLLDLVEPDLRVIIELGYDRTGYADVPTPAGLFPTDIDALTLAGDLADSTAHGIDHALA 410
Query 415 SIGL--LPQSALPN 426
+GL LP+ A+PN
Sbjct 411 DVGLPPLPKVAIPN 424
>gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792624|ref|NP_855117.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116862|ref|YP_177810.1| PE family protein [Mycobacterium tuberculosis H37Rv]
71 more sequence titles
Length=528
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 200/418 (48%), Positives = 270/418 (65%), Gaps = 16/418 (3%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+V A PEM+A TA+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
E Q + QA+AFH F RAL+AA Y AEA+N A + A + LGS G T
Sbjct 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
Query 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
Query 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
Query 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
Query 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAVASALATGTVQGPQAAL 413
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV + + GP AL
Sbjct 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIG-AAIGGPLTAL 407
>gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004634|emb|CCC43778.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=528
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 200/418 (48%), Positives = 270/418 (65%), Gaps = 16/418 (3%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+V A PEM+A TA+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
E Q + QA+AFH F RAL+AA Y AEA+N A + A + LGS G T
Sbjct 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
Query 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
Query 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
Query 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
Query 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAVASALATGTVQGPQAAL 413
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV + + GP AL
Sbjct 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVRIDPIAVPPQIG-AAIGGPLTAL 407
>gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacterium marinum M]
gi|183176777|gb|ACC41887.1| PE family protein [Mycobacterium marinum M]
Length=575
Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 202/459 (45%), Positives = 275/459 (60%), Gaps = 35/459 (7%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+++ P+++ A D+ GI ++I AS + G TTGL AAAADEVS+A A +FS +
Sbjct 1 MSHLVTQPQLMTAAAEDLVGIQTSIAEASIAVGGRTTGLAAAAADEVSAAIADVFSVFGE 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSG-TAGSSGALGSVGMLSGNPL 119
+ Q +Q A+H F + L A+ AY AEA A +SG TA S GA + L G
Sbjct 61 DYQAFARQVEAYHNAFVQTLTASANAYGHAEADAQALLSGSTAASGGAPSAQATLQGTTF 120
Query 120 TALMMGGTGEPILSDRVLAIIDSAYIRPIFG--PNNPVAQYTPEQWWPF---IGNLSLDQ 174
M+GG+G PI S + + Y+ FG P N A +TPE P I +L L+
Sbjct 121 -GWMIGGSGNPIPSQTYVNKV-LPYVNEAFGVLPENAKALFTPEGLQPIYTGIKSLPLNT 178
Query 175 SIAQGVTLLNNGINAEL--QNGHDVVVFGYSQSAAVATNEIRALM--ALPPGQAPDPSRL 230
S+ QGV +L+ I + L G V V GYSQSA +++ E+R LM AL P P P+ L
Sbjct 179 SVDQGVQILDQTIKSTLAAHPGDSVAVLGYSQSAIISSLEMRDLMNPALNP-TPPLPTEL 237
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
FTL+GN NPNGG+L R+VGL +P L + F G+TPPD+PY T +YT QYDG+A P+YP
Sbjct 238 GFTLLGNPMNPNGGLLSRFVGLNVPSLGLDFYGSTPPDTPYPTNIYTLQYDGFASFPRYP 297
Query 291 LNILSDLNAFMGIRWVHNAYPFTAAEVANAVP------LPTSPGYT--GNTHYYMFLTQD 342
LN+LSDLNAF+GI+ +H YP + AN P LP S T G T+YYM +
Sbjct 298 LNLLSDLNAFLGIQTIHGQYP--DLDPANLPPGYEMVTLPGSASLTGQGQTNYYMITHPN 355
Query 343 LPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPI 395
LP+ P+RAIP +G P+A+LI+P++R+LV+LGYG YGY A+VPTP LF +N +
Sbjct 356 LPITAPLRAIPVIGDPLADLIEPNMRILVNLGYGDPNYGYSTSPANVPTPFGLFPDVNYL 415
Query 396 AVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSA 434
VA LA GT QG A + I SA+ ++ LP++
Sbjct 416 EVAGMLADGTQQGGNAFIADI-----SAMAPSFADLPTS 449
>gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacterium marinum M]
gi|183173726|gb|ACC38836.1| PE family protein [Mycobacterium marinum M]
Length=589
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 209/465 (45%), Positives = 272/465 (59%), Gaps = 45/465 (9%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M+Y++ P++L + AADV+GI A+ A+A+AAGPTT L+AAAADEVS+AAA LF YA
Sbjct 1 MTYMMTQPQLLTSAAADVEGIRWALTQANAAAAGPTTSLVAAAADEVSTAAAKLFGGYAL 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGS-----SGALG------ 109
E Q V+ AFH EF R LAAAG AYA AEA NTA +SG + LG
Sbjct 61 EYQSVIGHVTAFHEEFVRTLAAAGTAYAGAEAVNTATISGALNALRTPIQSLLGGGAAST 120
Query 110 -------SVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQ 162
+P AL+MGG+G PI L + + YI + P + TPE
Sbjct 121 VAAGGAAVAPAALADPFVALIMGGSGTPIPPPDYLQDV-APYIPGM--PTQLLPLNTPEG 177
Query 163 WWPF--IGNLSLDQSIAQGVTLLNN---GINAELQNGHDVVVFGYSQSAAVATNEIRALM 217
+P I +L L+ S+A GV +L+N G + G++V V GYSQSA V++ E+R L
Sbjct 178 LYPLTAIKDLPLNTSVANGVQILDNALFGPQGLITLGNNVNVLGYSQSAVVSSLEMRNLQ 237
Query 218 ALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYT 277
AL +P+ LAFTL+GN PNGG+L R+ GL LP L + F G TP ++ Y+ YT
Sbjct 238 AL---GSPNTDNLAFTLLGNPMAPNGGLLSRFPGLSLPALGLDFYGGTPSNTGYELNQYT 294
Query 278 GQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVA----NAVPLPTSPGYTGNT 333
YDGYA PQYPLN+L+DLNAF GI++VH YP N V LP SPG G
Sbjct 295 LLYDGYADFPQYPLNLLADLNAFAGIQFVHGDYPDLDPNNLPAGYNLVQLPVSPGNNGLE 354
Query 334 HYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYG-------YGYADVPTPA 386
+YYM LP+L+P+RAIP +G P+A+L++P+L LV+LGYG GYADV TP
Sbjct 355 NYYMITYPGLPILEPLRAIPVIGNPLADLVEPNLTYLVNLGYGDPNYGYSTGYADVTTPF 414
Query 387 SLFAPINPIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYL 431
L PI+P+ A A+ GT QG A + I SA+P T P L
Sbjct 415 GLLPPIDPVDFAGAMVNGTQQGVTAFVNDI-----SAIPATLPSL 454
>gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003377|emb|CCC42497.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=588
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 210/447 (47%), Positives = 280/447 (63%), Gaps = 31/447 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
+SYV A P +LA A D+ GIGSAI A+A+AA PTTGL AAAADEVS+A A LF Y +
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAAAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVG------ML 114
+ Q + Q AAFH EFT+ LAAA A+ AEA+NT A+ A ++G M
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTTALVHEA-TAGLFRPTSPPVLPPMF 157
Query 115 SGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPV--AQYTPEQWWPFIG--NL 170
+ N TA++MGGTG PI + L I + +I P+ +NPV A TPE+ +P G +L
Sbjct 158 NQN--TAIIMGGTGSPIPTPSYLNAITTLFIDPVV--SNPVIKALVTPEELYPITGVKSL 213
Query 171 SLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRL 230
S+ G+ +L+ I ++ G+ V VFGYSQSA +A+ E++ L++L P AP PS+L
Sbjct 214 PFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGP-NAPSPSQL 272
Query 231 AFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYP 290
F LIGN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YP
Sbjct 273 NFILIGNEMNPNGGILARIPGLNVTTLGLPFYGAT-PDNPYPTTTYTLEYDGFADFPRYP 331
Query 291 LNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPI 349
LN+LSD+NA GI VH Y T A++A+A LPT G T NT YY+ T+ LPLL P+
Sbjct 332 LNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-YYIIETEHLPLLAPL 389
Query 350 RAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALA 402
RAIP +G P+A L++P+L V+V+LGYG +GY A+VPTP LF + VA AL
Sbjct 390 RAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALV 449
Query 403 TGTVQGPQAALV----SIGLLPQSALP 425
GT QG +V ++ LPQ+ +P
Sbjct 450 AGTQQGVNDFMVELPAALNTLPQTPMP 476
>gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacterium marinum M]
gi|183177617|gb|ACC42727.1| PE family protein [Mycobacterium marinum M]
Length=588
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/439 (45%), Positives = 266/439 (61%), Gaps = 38/439 (8%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M ++A+P+ + TA +V IG AI A + AGPTTGL AAAADEVS A A LF YA+
Sbjct 1 MIDLLASPQAMTATATEVAEIGLAINQADLAVAGPTTGLAAAAADEVSEAIATLFDNYAQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSG-------------TAGSSGA 107
Q V +QAAAFH F + L AA +Y +AEA+ A++G + S A
Sbjct 61 GYQAVSRQAAAFHDAFAQTLFAASDSYVRAEAAAVKALAGLTEPVANLFAPVLSGPESVA 120
Query 108 LGSVGMLSGNPLT----ALMMGGTGEPILSDRVLAIIDSAYIRPIF-GPNNPVAQYTPEQ 162
+ +LSG PL AL++ +G P S ++ + + Y+ P F P TP
Sbjct 121 ASATALLSGAPLKPVEAALILSESGVPTPSASYISDVYTKYVEPNFPSATAPQGVSTPNG 180
Query 163 WWPFIG--NLSLDQSIAQGVTLLNNGI---NAELQNGHDVVVFGYSQSAAVATNEIRALM 217
+PF G +L+LD S+A+G T+LN+ I A L G V V GYSQSA +++ + L+
Sbjct 181 LYPFTGIKDLTLDISLARGATILNDAILQQLAALPAGSSVAVLGYSQSAVLSSLVMPKLL 240
Query 218 ALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYT 277
A + S++ F L+GN NPNGGVL R+ L LP L +F GAT PD+ + T YT
Sbjct 241 A----EGVTSSQVNFVLLGNPMNPNGGVLARFPDLTLPSLGFTFYGAT-PDNAFPTVSYT 295
Query 278 GQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTHYY 336
+YDG+A P+YP+N+L+D+NA MGI +VH Y T A++ +AV LPT G T +T YY
Sbjct 296 LEYDGFADFPRYPINLLADINAVMGIPFVHADYQHLTQAQLDSAVQLPTE-GPTQST-YY 353
Query 337 MFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLF 389
M T+ LPLL P+R IP+VG P+AEL++P+LRVLV+LGYG YGY A+VPTP LF
Sbjct 354 MIPTEHLPLLAPLRFIPYVGDPLAELLEPNLRVLVNLGYGDPAYGYDTGPANVPTPFGLF 413
Query 390 APINPIAVASALATGTVQG 408
P++P+ VA LA GT QG
Sbjct 414 PPVSPLTVAEHLAAGTQQG 432
>gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=584
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/466 (43%), Positives = 275/466 (60%), Gaps = 41/466 (8%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M+Y+I P+ L AA V I SAI +A+A+ TTG++AAA DEVS A+LF Y +
Sbjct 1 MTYMITQPDTLTAAAASVAEIRSAIGSANAATVASTTGVIAAARDEVSELIASLFRAYGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAY-----------AQAEASNTAAMSGTAGSSGALG 109
ECQ V+ QA AFH F ++LA A +Y +A A+ ++ + G + L
Sbjct 61 ECQAVMTQAGAFHDAFAQSLATAATSYAQAEAANAATVTEALAAISSPVRAMLGGAAPLT 120
Query 110 SVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIF--GPNNPVAQYTPEQWW--P 165
S + S + L+MGG+G PI S + I S YI P F PN + +TPE ++
Sbjct 121 S-AVPSAAAVNTLVMGGSGNPIPSIDFVNNIVSRYIAPFFPVDPNFVQSLFTPEGFYIDT 179
Query 166 FIGNLSLDQSIAQGVTLLNN---GIN----AELQNGHDVVVFGYSQSAAVATNEIRALMA 218
I L L+ S+AQGVT+L N G N L +G+ V V G SQSA +A+ +R+L
Sbjct 180 GIKTLPLNVSVAQGVTILTNTLVGTNPPYAGLLTSGNTVNVSGESQSAMIASLVMRSLNP 239
Query 219 LPPGQAPDP--SRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMY 276
G A P + L F+L+GN NPNGG+ ER+VGL LP L + GAT PD+ + T ++
Sbjct 240 TNSGAAGSPYFNNLNFSLVGNPMNPNGGLFERFVGLSLPSLGIEMYGAT-PDNAFPTKIF 298
Query 277 TGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAY-PFTAAEVANAVPLPTSPGYTGNTHY 335
T +YDG A P+YP+N+L+DLNAFMGI+ +H Y T ++A A+PL + G T +T Y
Sbjct 299 TIEYDGAADFPRYPINVLADLNAFMGIQSLHGQYATLTPEQLATAIPLTNTVGPT-STSY 357
Query 336 YMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYG---YGYA----DVPTPASL 388
YM TQ+LPLL P+RAIPFVG PIA+L+QP+LR LV+ GYG YG++ +VPTP +
Sbjct 358 YMIPTQNLPLLDPVRAIPFVGKPIADLVQPNLRYLVNWGYGDPAYGWSTSPPNVPTPFGV 417
Query 389 FAPIN-PIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPS 433
P++ ++ LA GT QG A + I SA T+P LP+
Sbjct 418 LPPLSATTSLPGYLAIGTQQGISAFMNDI-----SAGIATFPDLPA 458
>gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacterium marinum M]
gi|183177282|gb|ACC42392.1| PPE family protein [Mycobacterium marinum M]
Length=594
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 193/456 (43%), Positives = 268/456 (59%), Gaps = 42/456 (9%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
M+YVI P++L T AAD+ I SAI A+A+AA PTT ++AAA DEVS A LFS Y +
Sbjct 1 MTYVITQPDILTTAAADIADIRSAIGVANAAAASPTTAMMAAAGDEVSQLIAKLFSAYGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS---------------GTAGSS 105
ECQ V+ AA FH F LAAAG+ Y QAEA+ TA +S GTA S+
Sbjct 61 ECQAVITDAAVFHDHFAATLAAAGSVYTQAEAAGTATLSQALTTLSSPIRALLGGTAAST 120
Query 106 GALGSVGMLS---GNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQ--YTP 160
+ G+P+ L++GG+G PI S ++ + S ++ P F + + Q +TP
Sbjct 121 SGAMAAAAPMAAAGDPIYTLVVGGSGNPIPSPAYISNVVSKFVAPYFPVDPALVQGLFTP 180
Query 161 EQWWPFIG--NLSLDQSIAQGVTLLNN---GIN----AELQNGHDVVVFGYSQSAAVATN 211
Q++ G L L+ S+ QGV +L N G N L +G+ V V G SQSA +A+
Sbjct 181 AQFYIDTGIKTLPLNVSVPQGVAILTNTLVGTNPPYLGLLTSGNTVNVTGDSQSAMIASL 240
Query 212 EIRALMALPPGQAPDP--SRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDS 269
+RAL G A P L F+L GN NPNGG+ R+ GL LP + + F G+TP D+
Sbjct 241 VMRALNPTNSGAAGSPYFDDLTFSLFGNPMNPNGGLFARFPGLSLPSMGLDFYGSTP-DN 299
Query 270 PYQTYMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPG 328
+ T ++T +YDG A P+YP+N L+DLNAF+GI+ +H YP T ++ A+PL + G
Sbjct 300 SFPTNVFTLEYDGAADFPRYPINFLADLNAFLGIQSLHGQYPSLTPEQLDTAIPLTNTVG 359
Query 329 YTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYG---YGYA----D 381
T +T+YYM + LPLL P+RAIP +GTPIA+LI+PDLR LV+ GYG YG++ +
Sbjct 360 PT-STNYYMIPSPHLPLLDPVRAIPVIGTPIADLIEPDLRYLVNWGYGDPAYGWSTSPPN 418
Query 382 VPTPASLFAPIN-PIAVASALATGTVQGPQAALVSI 416
VPTP + P+ ++ LA GT QG A + I
Sbjct 419 VPTPFGVLPPLQATTSLPGYLAIGTQQGVNAFVSDI 454
>gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=546
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/425 (45%), Positives = 256/425 (61%), Gaps = 28/425 (6%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYV+ P +A A ++ GIG+AI A+AS AGPTT + AAADEVS+A A LF + +
Sbjct 1 MSYVLTQPPAMAAAATELAGIGTAISEAAASVAGPTTTIATAAADEVSAAIAQLFGAFGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTA-----AMSGTAGSSGALGSVGMLS 115
E Q + Q A + +FT+ LAAA AY EA + A A +G +
Sbjct 61 EYQAINAQLGALYNQFTQNLAAAANAYFGDEAISAATLVKGATTGLFTPTSPPVVPPAFG 120
Query 116 GNPLTALMMGGTGEPILSDRVLAIIDSAYIRP--IFGPNNPVAQYTPEQWWPFIG--NLS 171
N TA++M GTG PI S + +A I + ++ P + P N T E+ +P G +L
Sbjct 121 QN--TAIVMSGTGSPIPSIQYVAAITNLFLPPGMVVNPLN-----TIEELYPITGVKSLP 173
Query 172 LDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLA 231
S+ G+ +L+ I ++ G+ V VFGYSQSA +++ EI+ L++L P + PDPS+L+
Sbjct 174 FQNSVQTGLQILDAAIWEQIHAGNHVTVFGYSQSAVISSLEIQQLLSLGPNK-PDPSQLS 232
Query 232 FTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPL 291
F IGN NPNGG+L R GL + L + F GAT D+PY T YT +YDG+A P+YPL
Sbjct 233 FIFIGNEMNPNGGILSRIPGLNISTLGLPFYGAT-ADNPYPTTTYTLEYDGFADFPRYPL 291
Query 292 NILSDLNAFMGIRWVHNAYPF-TAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIR 350
N+LSD+NA GI VH Y + T +VANA+ LPT G T N Y++ T LPLL P+R
Sbjct 292 NVLSDINAVFGIITVHTQYQYLTPQQVANAILLPTE-GVTSN-QYFIIPTAHLPLLDPVR 349
Query 351 AIPFVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALAT 403
AIP +G P+A LI+PDLRVLV+LGYG +GY A+VPTP LF + P + AL
Sbjct 350 AIPVIGPPLAALIEPDLRVLVNLGYGDPRFGYSTSPANVPTPFGLFPDVPPGVIVDALVA 409
Query 404 GTVQG 408
GT QG
Sbjct 410 GTHQG 414
>gi|289761589|ref|ZP_06520967.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709095|gb|EFD73111.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=528
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 194/418 (47%), Positives = 263/418 (63%), Gaps = 16/418 (3%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MS+V A PEM+A TA+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
E Q + QA+AFH Y AEA+N A + A + LGS G T
Sbjct 61 EFQALSAQASAFHDRVRAGPKRRSGWYVDAEAANAALVDTAATGASELGSGGR------T 114
Query 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
Query 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
Query 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
Query 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
Query 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAVASALATGTVQGPQAAL 413
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV + + GP AL
Sbjct 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIG-AAIGGPLTAL 407
>gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacterium marinum M]
gi|183173729|gb|ACC38839.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 197/422 (47%), Positives = 261/422 (62%), Gaps = 19/422 (4%)
Query 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
MSYV+A P +A A ++ GIGSA+ A+A+AAGPTT +L+AAADEVS+A A L +
Sbjct 1 MSYVVAQPPAIAAAATELTGIGSALSEATAAAAGPTTAILSAAADEVSTAIAQLLGTFGA 60
Query 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAM--SGTAG--SSGALGSVGMLSG 116
E Q + Q AAFH + + LA Y AE N AA+ TAG S + +V +
Sbjct 61 EYQGISTQLAAFHAQIAQRLATVANYYINAEEINNAALLEEATAGLYSPNSPPTVPAVF- 119
Query 117 NPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQ 174
N A+ MGGTG PI S L +++ YI+ I A +TPEQ +P G +L
Sbjct 120 NDYVAIAMGGTGTPIPSTSYLDAVNTLYIQHIAPGAIAKALFTPEQLYPITGVKSLPFQT 179
Query 175 SIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTL 234
S+ +G+ +L+ I E+ G+ V VFGYSQSA +A+ E++ ++L P APDPS++ F L
Sbjct 180 SVQEGLKILDISIWNEINAGNHVTVFGYSQSAVIASLEMQHFISLGP-NAPDPSQINFIL 238
Query 235 IGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNIL 294
GN NPNGG+L R GL + L + F GAT PD+PY T YT +YDG+A P+YPLN+L
Sbjct 239 TGNEMNPNGGILARIPGLNVASLGLPFYGAT-PDNPYYTTTYTLEYDGFADFPRYPLNVL 297
Query 295 SDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIP 353
SD+NA GI VH YP T ++A+A LPT TG YYM T++LPLL P+RAIP
Sbjct 298 SDVNAVFGILTVHRTYPDLTPEQIASATLLPTEGPTTGT--YYMIRTENLPLLDPVRAIP 355
Query 354 FVGTPIAELIQPDLRVLVDLGYG---YGY----ADVPTPASLFAPINPIAVASALATGTV 406
+G P+A L+QPDL+VLV+LGYG YGY A+VPTP LF ++ VA AL GT
Sbjct 356 VIGEPLAALVQPDLKVLVNLGYGDPNYGYSTSPANVPTPFGLFPDVSLQVVADALVAGTH 415
Query 407 QG 408
QG
Sbjct 416 QG 417
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 988661997050
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40