BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0160c
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
gi|15839540|ref|NP_334577.1| PE family protein [Mycobacterium tu... 1000 0.0
gi|339630242|ref|YP_004721884.1| PE family protein [Mycobacteriu... 999 0.0
gi|289568058|ref|ZP_06448285.1| PE family protein [Mycobacterium... 998 0.0
gi|31791338|ref|NP_853831.1| PE family protein [Mycobacterium bo... 997 0.0
gi|254549098|ref|ZP_05139545.1| PE family protein [Mycobacterium... 997 0.0
gi|289441535|ref|ZP_06431279.1| PE family protein [Mycobacterium... 997 0.0
gi|340625197|ref|YP_004743649.1| PE family protein [Mycobacteriu... 984 0.0
gi|289764277|ref|ZP_06523655.1| PE family protein [Mycobacterium... 746 0.0
gi|289572740|ref|ZP_06452967.1| PE family protein [Mycobacterium... 733 0.0
gi|240168173|ref|ZP_04746832.1| PE family protein [Mycobacterium... 666 0.0
gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobac... 660 0.0
gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium u... 653 0.0
gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium... 571 1e-160
gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacteriu... 481 2e-133
gi|240168172|ref|ZP_04746831.1| PE family protein [Mycobacterium... 463 4e-128
gi|298527551|ref|ZP_07014960.1| PE family protein [Mycobacterium... 453 4e-125
gi|148821351|ref|YP_001286105.1| PE family protein [Mycobacteriu... 453 4e-125
gi|340625196|ref|YP_004743648.1| PE family protein [Mycobacteriu... 452 6e-125
gi|57116696|ref|YP_177697.1| PE family protein [Mycobacterium tu... 451 1e-124
gi|31791337|ref|NP_853830.1| PE family protein [Mycobacterium bo... 450 3e-124
gi|15839539|ref|NP_334576.1| PE family protein [Mycobacterium tu... 449 5e-124
gi|240168166|ref|ZP_04746825.1| PE family protein [Mycobacterium... 442 8e-122
gi|183980413|ref|YP_001848704.1| PE-PGRS family protein [Mycobac... 403 4e-110
gi|240168171|ref|ZP_04746830.1| PE-PGRS family protein [Mycobact... 401 2e-109
gi|240168170|ref|ZP_04746829.1| PE-PGRS family protein [Mycobact... 366 5e-99
gi|289568057|ref|ZP_06448284.1| predicted protein [Mycobacterium... 348 1e-93
gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacteriu... 334 2e-89
gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacteri... 303 5e-80
gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacteriu... 296 5e-78
gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacteriu... 294 2e-77
gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tu... 288 1e-75
gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacteriu... 286 9e-75
gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacteriu... 281 2e-73
gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium... 281 3e-73
gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacteriu... 279 8e-73
gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacteriu... 277 3e-72
gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium... 272 8e-71
gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bo... 272 8e-71
gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium... 272 8e-71
gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tu... 272 8e-71
gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [My... 270 4e-70
gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium... 270 5e-70
gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium... 269 7e-70
gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacteriu... 269 9e-70
gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium... 267 4e-69
gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacteriu... 266 6e-69
gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacteriu... 266 7e-69
gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacteriu... 260 4e-67
gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tu... 260 4e-67
gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacteriu... 258 2e-66
>gi|15839540|ref|NP_334577.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57116697|ref|YP_177698.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659924|ref|YP_001281447.1| PE family protein [Mycobacterium tuberculosis H37Ra]
55 more sequence titles
Length=502
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/502 (100%), Positives = 502/502 (100%), Gaps = 0/502 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
Sbjct 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
Query 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
Sbjct 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
Query 481 LLSLMSGGLGNILHLIPPPVFT 502
LLSLMSGGLGNILHLIPPPVFT
Sbjct 481 LLSLMSGGLGNILHLIPPPVFT 502
>gi|339630242|ref|YP_004721884.1| PE family protein [Mycobacterium africanum GM041182]
gi|339329598|emb|CCC25234.1| PE family protein [Mycobacterium africanum GM041182]
Length=502
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/502 (99%), Positives = 501/502 (99%), Gaps = 0/502 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNT VNNQLALDNKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
Sbjct 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
Query 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
Sbjct 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
Query 481 LLSLMSGGLGNILHLIPPPVFT 502
LLSLMSGGLGNILHLIPPPVFT
Sbjct 481 LLSLMSGGLGNILHLIPPPVFT 502
>gi|289568058|ref|ZP_06448285.1| PE family protein [Mycobacterium tuberculosis T17]
gi|289748636|ref|ZP_06508014.1| PE family protein [Mycobacterium tuberculosis T92]
gi|289756224|ref|ZP_06515602.1| PE family protein [Mycobacterium tuberculosis EAS054]
gi|289541811|gb|EFD45460.1| PE family protein [Mycobacterium tuberculosis T17]
gi|289689223|gb|EFD56652.1| PE family protein [Mycobacterium tuberculosis T92]
gi|289696811|gb|EFD64240.1| PE family protein [Mycobacterium tuberculosis EAS054]
Length=502
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/502 (99%), Positives = 501/502 (99%), Gaps = 0/502 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDIN AFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINNAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
Sbjct 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
Query 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
Sbjct 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
Query 481 LLSLMSGGLGNILHLIPPPVFT 502
LLSLMSGGLGNILHLIPPPVFT
Sbjct 481 LLSLMSGGLGNILHLIPPPVFT 502
>gi|31791338|ref|NP_853831.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636072|ref|YP_976295.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988545|ref|YP_002643232.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616923|emb|CAD93029.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491719|emb|CAL70180.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771658|dbj|BAH24464.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600088|emb|CCC62757.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=502
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/502 (99%), Positives = 500/502 (99%), Gaps = 0/502 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGR PLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRTPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNT VNNQLALDNKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
Sbjct 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
Query 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
Sbjct 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
Query 481 LLSLMSGGLGNILHLIPPPVFT 502
LLSLMSGGLGNILHLIPPPVFT
Sbjct 481 LLSLMSGGLGNILHLIPPPVFT 502
>gi|254549098|ref|ZP_05139545.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=502
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/502 (99%), Positives = 501/502 (99%), Gaps = 0/502 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGG YADIPTPAGLFSIP
Sbjct 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGYYADIPTPAGLFSIP 420
Query 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
Sbjct 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
Query 481 LLSLMSGGLGNILHLIPPPVFT 502
LLSLMSGGLGNILHLIPPPVFT
Sbjct 481 LLSLMSGGLGNILHLIPPPVFT 502
>gi|289441535|ref|ZP_06431279.1| PE family protein [Mycobacterium tuberculosis T46]
gi|289414454|gb|EFD11694.1| PE family protein [Mycobacterium tuberculosis T46]
Length=502
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/502 (99%), Positives = 501/502 (99%), Gaps = 0/502 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDIN AFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINNAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
Sbjct 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
Query 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFG+PQVT
Sbjct 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGEPQVT 480
Query 481 LLSLMSGGLGNILHLIPPPVFT 502
LLSLMSGGLGNILHLIPPPVFT
Sbjct 481 LLSLMSGGLGNILHLIPPPVFT 502
>gi|340625197|ref|YP_004743649.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003387|emb|CCC42507.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=502
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/502 (99%), Positives = 498/502 (99%), Gaps = 0/502 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+LVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSYLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTL AAGNAYAHAEAANAA VSHALDTINAPIRTLLG APLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLAAAGNAYAHAEAANAAWVSHALDTINAPIRTLLGLAPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLP+IAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPSIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLAL NKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALGNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
Sbjct 361 FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP 420
Query 421 NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
NPFAVTYYLIKGSLQAPYGA+VEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
Sbjct 421 NPFAVTYYLIKGSLQAPYGAVVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT 480
Query 481 LLSLMSGGLGNILHLIPPPVFT 502
LLSLMSGGLGNILHLIPPPVFT
Sbjct 481 LLSLMSGGLGNILHLIPPPVFT 502
>gi|289764277|ref|ZP_06523655.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289711783|gb|EFD75799.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=374
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/374 (99%), Positives = 374/374 (100%), Gaps = 0/374 (0%)
Query 129 LPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLFTPEQFWPV 188
+PAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLFTPEQFWPV
Sbjct 1 MPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLFTPEQFWPV 60
Query 189 TPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINSLMAMGSPN 248
TPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINSLMAMGSPN
Sbjct 61 TPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINSLMAMGSPN 120
Query 249 PDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHA 308
PDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHA
Sbjct 121 PDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHA 180
Query 309 PQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPL 368
PQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPL
Sbjct 181 PQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPL 240
Query 369 LQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYY 428
LQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYY
Sbjct 241 LQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYY 300
Query 429 LIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGG 488
LIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGG
Sbjct 301 LIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGG 360
Query 489 LGNILHLIPPPVFT 502
LGNILHLIPPPVFT
Sbjct 361 LGNILHLIPPPVFT 374
>gi|289572740|ref|ZP_06452967.1| PE family protein [Mycobacterium tuberculosis K85]
gi|289537171|gb|EFD41749.1| PE family protein [Mycobacterium tuberculosis K85]
Length=369
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/369 (99%), Positives = 368/369 (99%), Gaps = 0/369 (0%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQFWPVTPDLGNLTFNQSVTEGVALLNT VNNQLALDNKVVAFGYSQSATIINNYINS
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS 240
Query 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
Sbjct 241 LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA 300
Query 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
Sbjct 301 QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM 360
Query 361 FLTQDLPLL 369
FLTQDLPLL
Sbjct 361 FLTQDLPLL 369
>gi|240168173|ref|ZP_04746832.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=502
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/509 (72%), Positives = 416/509 (82%), Gaps = 16/509 (3%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS++ AP++LA+AAA VD IA+ + AA+ AAAGPT NLLAAAGDEVSAATAALF+AY +
Sbjct 1 MSYVFAAPELLASAAADVDGIAAAIGAASVAAAGPTSNLLAAAGDEVSAATAALFNAYAQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARV--------SHALDTINAPIRTL 112
EYQAVV+QAAAF EFTRTL A AYA AEAANAA + S+A + API++L
Sbjct 61 EYQAVVRQAAAFQQEFTRTLAVAAGAYAQAEAANAALLNGALNGALSNARTAVTAPIQSL 120
Query 113 LGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFP 172
L A G GG A+ + A + ALIMGGT NP PDP+Y+ IN +IQ LFP
Sbjct 121 LTSA------GVGTGGPSALTAVPAAASQIALIMGGTGNPDPDPKYLNRINVKYIQHLFP 174
Query 173 GAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSAT 232
GA+ + LFTPEQFWPVTP LGN+TFNQSV +GV LN A+N Q+AL NKVVAFGYSQSAT
Sbjct 175 GAIPKALFTPEQFWPVTPQLGNMTFNQSVAQGVTALNNAINAQIALGNKVVAFGYSQSAT 234
Query 233 IINNYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSP 292
I+NN IN+L++ G+P+ +DISFVMIG+ N P GG+L+RFPGFYIPFLDVPFNGATP NSP
Sbjct 235 IVNNEINALISAGAPHANDISFVMIGNPNTPDGGILSRFPGFYIPFLDVPFNGATPPNSP 294
Query 293 YPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGY 352
Y T IYTAQYDGIA+AP++PL ILSDINAFMGYFYVHNTYP L A+++ NAVPLPTSPGY
Sbjct 295 YATTIYTAQYDGIANAPRYPLNILSDINAFMGYFYVHNTYPTLSASEIANAVPLPTSPGY 354
Query 353 TGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPT 412
GNTQYYM LTQDLPL+QPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGP NYA++PT
Sbjct 355 AGNTQYYMLLTQDLPLVQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGP--NYANVPT 412
Query 413 PAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNF 472
PAGL SIPNPFAV YYL GSLQAPY A VEIGVEAG GPEWFP +YPW+PSINPGL+F
Sbjct 413 PAGLLSIPNPFAVGYYLALGSLQAPYAAAVEIGVEAGFWGPEWFPQAYPWIPSINPGLHF 472
Query 473 YFGQPQVTLLSLMSGGLGNILHLIPPPVF 501
Y GQP+VTLLSL SGGLG++LHLIPPPVF
Sbjct 473 YIGQPEVTLLSLASGGLGSLLHLIPPPVF 501
>gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobacterium marinum M]
gi|183173741|gb|ACC38851.1| PE family protein, PE4 [Mycobacterium marinum M]
Length=505
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/507 (73%), Positives = 421/507 (84%), Gaps = 9/507 (1%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++TAPD+LA+AA VD IA+TL+ AN+AAA PT LLAAA DEVSAA A +FSAYG+
Sbjct 1 MSYVLTAPDLLASAATDVDGIAATLQVANSAAAAPTSGLLAAAQDEVSAAIAKVFSAYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN----AARVSHALDTINAPIRTLLGRA 116
EYQA + QA+AFH+EFTR L AAG AYA AEAAN A VS AL I PI++LLG A
Sbjct 61 EYQAAIAQASAFHTEFTRALAAAGAAYAQAEAANASLITAGVSDALTAITTPIQSLLGPA 120
Query 117 PLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVS 176
+ G+ AG L A++ P+ ALIMGGT+ PLP P YV+DIN +IQ LF GA+
Sbjct 121 AIGTGGAGSAGALTAVSSTLMADPVVALIMGGTSVPLPGPGYVSDINNNYIQPLFSGAIP 180
Query 177 QGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINN 236
Q LFTPEQFWPVTP LGNLTFNQSV +GV LLN A+N QLAL NKVVAFGYSQSATI+NN
Sbjct 181 QALFTPEQFWPVTPGLGNLTFNQSVAQGVTLLNDAINTQLALGNKVVAFGYSQSATIVNN 240
Query 237 YINSLMAMGS--PNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYP 294
I +LMAMG+ P+P D+SF+M+G+ NNP GGLLARFPGFYIPFLDV FNGATPA +PYP
Sbjct 241 EILALMAMGTGAPDPGDLSFIMVGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAANPYP 300
Query 295 THIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTG 354
T I+TAQYDGIAHAPQ+PL ILSDINA MGYFYVH YP+LM+ Q A+ LPTSPGYTG
Sbjct 301 TSIFTAQYDGIAHAPQYPLNILSDINAIMGYFYVHGNYPDLMSGQ---AIQLPTSPGYTG 357
Query 355 NTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPA 414
NT YYM+LTQDLPL+QPIRDIPYAGPP+ADL QPQLRVLVDLGY+DYGPG +YAD+PTPA
Sbjct 358 NTDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGLSYADVPTPA 417
Query 415 GLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYF 474
GL S+PNPFAV+YYL+KGSLQAPYGA VEIGVEAGL+GPE FPD+YPWVPS+NPGLNFY
Sbjct 418 GLLSVPNPFAVSYYLLKGSLQAPYGAAVEIGVEAGLLGPESFPDTYPWVPSLNPGLNFYL 477
Query 475 GQPQVTLLSLMSGGLGNILHLIPPPVF 501
GQP VTLLSL+SGGLG+I HLIPPPVF
Sbjct 478 GQPSVTLLSLLSGGLGDIFHLIPPPVF 504
>gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118568885|gb|ABL03636.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=505
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/507 (72%), Positives = 419/507 (83%), Gaps = 9/507 (1%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++TAPD+LA+AA VD IA+TL+ AN+AAA T LLAAA DEVSAA A +FSAYG+
Sbjct 1 MSYVLTAPDLLASAATDVDGIAATLQVANSAAAALTSGLLAAAQDEVSAAIAKVFSAYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN----AARVSHALDTINAPIRTLLGRA 116
EYQA + QA+AFH+EFTR L AAG AYA AEAAN A VS AL I PI++LLG A
Sbjct 61 EYQAAIAQASAFHTEFTRALAAAGAAYAQAEAANASLITAGVSDALTAITTPIQSLLGPA 120
Query 117 PLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVS 176
+ G+ AG L A++ P+ ALIMGGT+ PLP P YV+DIN +IQ LF GA+
Sbjct 121 AIGTGGAGSAGALTAVSSTLMADPVVALIMGGTSVPLPGPGYVSDINNNYIQPLFSGAIP 180
Query 177 QGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINN 236
Q LFTPEQFWPVTP LGNLTFNQSV +GV LLN A+N QLAL NKVVAFGYSQSATI+NN
Sbjct 181 QALFTPEQFWPVTPGLGNLTFNQSVAQGVTLLNDAINTQLALGNKVVAFGYSQSATIVNN 240
Query 237 YINSLMAMGS--PNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYP 294
I +LMAMG+ P+P D+SF+M+G+ NNP GGLLARFPGFYIPFLDV FNGATPA +PYP
Sbjct 241 EILALMAMGTGAPDPGDLSFIMVGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAANPYP 300
Query 295 THIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTG 354
T I+TAQYDGIAHAPQ+ L ILSDINA MGYFYVH YP+LM+ Q A+ LPTSPGYTG
Sbjct 301 TSIFTAQYDGIAHAPQYRLNILSDINAIMGYFYVHGNYPDLMSGQ---AIQLPTSPGYTG 357
Query 355 NTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPA 414
NT YYM+LTQDLPL+QPIRDIPYAGPP+ADL QPQLRVLVDLGY+DYGPG +YAD+PTPA
Sbjct 358 NTDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGLSYADVPTPA 417
Query 415 GLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYF 474
GL S+PNPFAV+YYL+KGSLQAPYGA VEIGVEAGL+GPE FPD+YPWVPS+NPGLNFY
Sbjct 418 GLLSVPNPFAVSYYLLKGSLQAPYGAAVEIGVEAGLLGPESFPDTYPWVPSLNPGLNFYL 477
Query 475 GQPQVTLLSLMSGGLGNILHLIPPPVF 501
GQP VTLLSL+SGGLG+I HLIPPPVF
Sbjct 478 GQPSVTLLSLLSGGLGDIFHLIPPPVF 504
>gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=495
Score = 571 bits (1471), Expect = 1e-160, Method: Compositional matrix adjust.
Identities = 316/502 (63%), Positives = 385/502 (77%), Gaps = 14/502 (2%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSH++TAP+M+ATAA V I S + ANAAAA P +LAAAGDEVS A A LFSAYG
Sbjct 1 MSHVLTAPEMVATAATDVAGIRSAISMANAAAAAPVSGVLAAAGDEVSTAIARLFSAYGL 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAA---RVSHALDTINAPIRTLLGRAP 117
EYQAV++QAAAFH++FT L AA +AYA AEAA AA R S+ L +NAPIRTLLG
Sbjct 61 EYQAVMEQAAAFHADFTAALAAAASAYAEAEAAGAALLSRASNGLGAVNAPIRTLLGS-- 118
Query 118 LSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQ 177
+P G+ +G L ++ +LAA P+TALIMGGT+NPLPDP YVT IN A+IQ FPGAV Q
Sbjct 119 -TPAGTGSSGALASMMKLAAVDPLTALIMGGTDNPLPDPAYVTAINNAYIQPRFPGAVPQ 177
Query 178 GLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQL-ALDNKVVAFGYSQSATIINN 236
GLFTPEQFWP+T G LTF QSV +GV LLN+ +++Q+ L N VV FGYSQSA I N
Sbjct 178 GLFTPEQFWPIT---GTLTFGQSVAQGVTLLNSEIDHQINTLGNSVVVFGYSQSAAIATN 234
Query 237 YINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTH 296
IN+LMA G+P +SFV+ + NNP GG+LARFPGFYIPFLDVPF GATP NSPYPT
Sbjct 235 EINALMAAGAPYTGQLSFVLASNPNNPDGGILARFPGFYIPFLDVPFTGATPPNSPYPTS 294
Query 297 IYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNT 356
+YT QY+G+A+APQ+PL +LSD+NA MGYFY+H+TY L A QV A+PLPTSPGYTGNT
Sbjct 295 MYTIQYEGVANAPQYPLHVLSDVNAVMGYFYLHDTYQHLTAAQVGGALPLPTSPGYTGNT 354
Query 357 QYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGL 416
QYYM LTQ+LPL+QPIRDIPY GPP+ADL QP LRVLVDLGY + G G +YA++PTPA L
Sbjct 355 QYYMLLTQNLPLVQPIRDIPYLGPPLADLIQPDLRVLVDLGYGNIGVGADYANVPTPARL 414
Query 417 FSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQ 476
+ +PF+V + L KG++Q P A+V+I GL+ + PD+YP+VPS+NPGL+ FGQ
Sbjct 415 VQLIDPFSVGFNLAKGAVQGPQAALVDI----GLLPSSYLPDTYPYVPSLNPGLSVSFGQ 470
Query 477 PQVTLLSLMSGGLGNILHLIPP 498
P VT LS++S LG+ILHLIPP
Sbjct 471 PSVTGLSVLSCTLGSILHLIPP 492
>gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacterium marinum M]
gi|183173740|gb|ACC38850.1| PE family protein [Mycobacterium marinum M]
Length=496
Score = 481 bits (1237), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 270/501 (54%), Positives = 340/501 (68%), Gaps = 27/501 (5%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++TAP+ML TAA +D I S ++AA+AA AGPT + AAA DEVS A A LF +G+
Sbjct 1 MSYVITAPEMLTTAATDLDGIGSAIKAASAAVAGPTTGVAAAAADEVSGAIAKLFGMFGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQ+VV QA+AF +EFTR L AG++YA EA+NA L +N +TLLG A +
Sbjct 61 EYQSVVAQASAFQTEFTRLLATAGDSYAITEASNA------LGALNTQAQTLLGGAFGTA 114
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G+S G L A +A +MGGT P PD YVT + FI FPG +Q LF
Sbjct 115 AGTSATGPLAAGTHVA-------FVMGGTAIPWPDATYVTAVQDLFIDPHFPGFTTQVLF 167
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLAL-DNKVVAFGYSQSATIINNYIN 239
TPEQ WP T +LG+LTF QSV +GVA+L A++ QL+ N V FGYSQSATI N I
Sbjct 168 TPEQLWPFTSNLGSLTFGQSVAQGVAILRDALSAQLSDPANTAVVFGYSQSATIATNQIR 227
Query 240 SLMA-MGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIY 298
+ M+ + P+P +SFV+ G+ NNP GG+L RF G Y+P +DV FNGATP +SPYPT IY
Sbjct 228 AFMSQLNPPSPSQLSFVLTGNPNNPDGGVLERFNGLYLPIVDVLFNGATPPDSPYPTAIY 287
Query 299 TAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMAT--------QVDNAVPLPTSP 350
TAQYDGIA+ P++PL ++SD+NA MG+ Y + Y L + V NAV LPTSP
Sbjct 288 TAQYDGIANFPRYPLNVVSDVNAIMGFLYDEHYYAGLTSDPNAIGSGPTVANAVQLPTSP 347
Query 351 GYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADI 410
GYTGNT+YYM L Q LPL P+R IPY G PIADL QP LRV+VDLGY+DYGPG NYADI
Sbjct 348 GYTGNTEYYMVLGQHLPLTDPLRQIPYVGTPIADLIQPSLRVIVDLGYSDYGPGQNYADI 407
Query 411 PTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGL 470
PTPA LFS+PNP AV+YYL KG++Q + V+ G + + PD+YP+V S++PGL
Sbjct 408 PTPASLFSLPNPLAVSYYLGKGAVQ----GVQAFMVDEGWLPQSYLPDTYPYVASLSPGL 463
Query 471 NFYFGQPQVTLLSLMSGGLGN 491
N Y GQP VT LSL++G LG
Sbjct 464 NVYLGQPSVTGLSLLTGALGT 484
>gi|240168172|ref|ZP_04746831.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=493
Score = 463 bits (1191), Expect = 4e-128, Method: Compositional matrix adjust.
Identities = 279/503 (56%), Positives = 340/503 (68%), Gaps = 18/503 (3%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+L+TAP+M++ AA +D IA+ L AANAAAAGPT LLAAA DEVS A A LF A+G+
Sbjct 1 MSYLLTAPEMVSAAATDLDGIAAALYAANAAAAGPTTGLLAAAEDEVSRAVATLFGAFGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAVV AAAFH+EFTR L AA A A A A S+AL ++TLL PL P
Sbjct 61 EYQAVVTHAAAFHTEFTRALAAA----ASAYAQAEATASNALSAFGTQVQTLL--TPLLP 114
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
NG +GA P+I L + A IMGGT P PD YVT FIQ FPG +S L
Sbjct 115 NGGAGAINPPSITSLGTQ---VAFIMGGTGIPDPDAMYVTGAQTLFIQPRFPGYLSNALH 171
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLAL-DNKVVAFGYSQSATIINNYIN 239
TPEQFWP TP+LGNLTF +SV EGVA+L+ A+ QL+ N V +GYSQSA I I
Sbjct 172 TPEQFWPTTPNLGNLTFGRSVAEGVAILSNALTTQLSTAGNSAVVYGYSQSAAIATIEIR 231
Query 240 SLMAMGSP-NPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIY 298
LMA +P +P D+ FV+ G+ NNP GG+L RF G Y+P LDV FNGATP +SPYPT IY
Sbjct 232 HLMAQVTPPSPSDLGFVLTGNPNNPNGGVLQRFTGLYVPVLDVLFNGATPPDSPYPTVIY 291
Query 299 TAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQY 358
T QYDG + PQ+PL +L+D+NA +G + Y L QV NAV LPTSPGY+GNT+Y
Sbjct 292 TNQYDGTGNFPQYPLNLLADLNAVIGIVDGTHYYVGLPPDQVANAVHLPTSPGYSGNTEY 351
Query 359 YMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFS 418
++ LTQ LPL IR IPY G P+A+L QP LRVLVDLGY+DYGPG +YADIPTPA S
Sbjct 352 FLGLTQKLPLTSLIRPIPYVGTPLAELVQPDLRVLVDLGYSDYGPGLSYADIPTPASFLS 411
Query 419 IPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQ 478
+PNPFAV+YYL KG++Q ++V + G + P + P YP+ PS+ PGLNF+ GQP
Sbjct 412 VPNPFAVSYYLAKGAVQGVQSSMVSL----GWLPPSYIPTGYPYAPSVAPGLNFFVGQPS 467
Query 479 VTLLSLMSGGLGNI---LHLIPP 498
VT LSL++G LG L IPP
Sbjct 468 VTGLSLLTGALGTAAKDLGWIPP 490
>gi|298527551|ref|ZP_07014960.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497345|gb|EFI32639.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
Length=468
Score = 453 bits (1165), Expect = 4e-125, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 340/501 (68%), Gaps = 38/501 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++ AP+MLATAAA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E Q V+KQAAAFH EFTR L AAG AYA A+A+N A +S
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAQASNTAAMS--------------------- 99
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT LS++SG LG++ LIPP
Sbjct 446 SVTELSVLSGALGSVARLIPP 466
>gi|148821351|ref|YP_001286105.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253797081|ref|YP_003030082.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254366611|ref|ZP_04982655.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
49 more sequence titles
Length=468
Score = 453 bits (1165), Expect = 4e-125, Method: Compositional matrix adjust.
Identities = 269/501 (54%), Positives = 340/501 (68%), Gaps = 38/501 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++ AP+MLATAAA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT LS++SG LG++ LIPP
Sbjct 446 SVTELSVLSGALGSVARLIPP 466
>gi|340625196|ref|YP_004743648.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003386|emb|CCC42506.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=468
Score = 452 bits (1163), Expect = 6e-125, Method: Compositional matrix adjust.
Identities = 269/501 (54%), Positives = 339/501 (68%), Gaps = 38/501 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++ AP+MLATAAA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP NSPY T++
Sbjct 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPNSPYQTYM 275
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL FGQ
Sbjct 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMINFGQS 445
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT LS++SG LG++ LIPP
Sbjct 446 SVTELSVLSGALGSVARLIPP 466
>gi|57116696|ref|YP_177697.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659923|ref|YP_001281446.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|167970280|ref|ZP_02552557.1| PE family protein [Mycobacterium tuberculosis H37Ra]
11 more sequence titles
Length=468
Score = 451 bits (1160), Expect = 1e-124, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 339/501 (68%), Gaps = 38/501 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++ AP+MLAT AA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT LS++SG LG++ LIPP
Sbjct 446 SVTELSVLSGALGSVARLIPP 466
>gi|31791337|ref|NP_853830.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636071|ref|YP_976294.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988544|ref|YP_002643231.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616922|emb|CAD93028.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491718|emb|CAL70179.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771657|dbj|BAH24463.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600087|emb|CCC62756.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=468
Score = 450 bits (1157), Expect = 3e-124, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 339/501 (68%), Gaps = 38/501 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++ AP+MLATAAA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+ FLD+ FNGATP +SPY T++
Sbjct 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYM 275
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASLF 389
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT LS++SG LG++ LIPP
Sbjct 446 SVTELSVLSGALGSVARLIPP 466
>gi|15839539|ref|NP_334576.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|13879650|gb|AAK44390.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|323717147|gb|EGB26356.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=468
Score = 449 bits (1155), Expect = 5e-124, Method: Compositional matrix adjust.
Identities = 268/501 (54%), Positives = 339/501 (68%), Gaps = 38/501 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++ AP+MLATAAA VD I S +RAA+A+AAGPT LLAAA DEVS+A AALFS Y R
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E Q V+KQAAAFH EFTR L AAG AYA AEA+N A +S
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMS--------------------- 99
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G++G+ G + + +P+TAL+MGGT P+ + I+ A+I+ +F +
Sbjct 100 -GTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQY 158
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 159 TPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRA 215
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T++
Sbjct 216 LMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYM 275
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 276 YTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNTH 334
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMFLTQDLPLLQPIR IP+ G PIA+L QP L VLVDLGY G YAD+PTPA LF
Sbjct 335 YYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLWVLVDLGY-----GYGYADVPTPASLF 389
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 390 APINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQS 445
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT LS++SG LG++ LIPP
Sbjct 446 SVTELSVLSGALGSVARLIPP 466
>gi|240168166|ref|ZP_04746825.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=487
Score = 442 bits (1136), Expect = 8e-122, Method: Compositional matrix adjust.
Identities = 282/501 (57%), Positives = 347/501 (70%), Gaps = 19/501 (3%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M ++ P+MLA AAA VD I S + AA AAAGPT ++LAAAGDEVSAA AALF AY
Sbjct 1 MPSVIAVPEMLAAAAAGVDGIGSAVSAAGTAAAGPTAHVLAAAGDEVSAAAAALFRAYAH 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
+ QAV+ QA AFHSEFT+ L AAG AYA AEAAN A ++ ALDT+ AP++ LLG L
Sbjct 61 DCQAVLNQAEAFHSEFTQALAAAGAAYAQAEAANTAAMAGALDTLGAPVQALLG---LGN 117
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G GA P + + +P+TALIMGGT P + ++ A+IQ +F +
Sbjct 118 TGPGGAVTTPTSTVMLSGNPVTALIMGGTGYPTFPAPVLAALDSAYIQPIFGPNNPVAQY 177
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ+WP +G+L+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I +
Sbjct 178 TPEQWWPF---IGHLSLDQSIAQGVTLLNNGINTELQNGHDVVVFGYSQSAAVATNEIRA 234
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ P+P ++F+MIG+ NNP GG+L R+ G YIPF+DV F+GATP NSPY T+I
Sbjct 235 LMALPPGQQPDPSRLAFMMIGNINNPNGGILERYTGLYIPFMDVSFDGATPPNSPYQTYI 294
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG AH PQ+PL ILSDINAFMG VHN YP + A V NAVPLPTSPGYTGNT
Sbjct 295 YTGQYDGYAHNPQYPLNILSDINAFMGIRLVHNAYP-VTAADVANAVPLPTSPGYTGNTH 353
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMFLTQDLPLLQP+RDIP+ GPP+A+L QP LRVLVDLGY G YAD+PTPA LF
Sbjct 354 YYMFLTQDLPLLQPLRDIPFIGPPLANLIQPDLRVLVDLGY-----GYGYADVPTPASLF 408
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
+ NPF V +L G++Q P A+V+IGV + PD+YP+VPS NPGL F FGQ
Sbjct 409 APVNPFTVISHLATGAVQGPQAALVDIGV----LPQSSLPDTYPYVPSANPGLVFNFGQS 464
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT LSL+SG LG+I LIPP
Sbjct 465 SVTELSLLSGALGSIARLIPP 485
>gi|183980413|ref|YP_001848704.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173739|gb|ACC38849.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=493
Score = 403 bits (1035), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 241/500 (49%), Positives = 317/500 (64%), Gaps = 15/500 (3%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS++ T P+ L+TAAA + I S L A++AAAGPT NLLAAA DEVSA + +F YG
Sbjct 1 MSYVRTIPEFLSTAAADIGGIGSALTDASSAAAGPTTNLLAAAADEVSAVVSKVFGGYGL 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
QAV+ QA+AFH EFT L AG YA AE NA +++A+ + P L + +
Sbjct 61 SAQAVLTQASAFHDEFTELLANAGGIYAQAEVDNAEALTNAVGEFSEPFIQLWDPS-YTY 119
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
GS+ A G + +P ALIMGGT +P P P YVT IN AFIQ FPGA S GL
Sbjct 120 VGSNIATGPNPQPNEPSLTPEFALIMGGTFDPQPFPLYVTTINNAFIQPFFPGATSVGLS 179
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
P QFWP+T LT NQSV EGV LN A++ Q+ V+ FG+SQSA + +
Sbjct 180 YPAQFWPLT---SGLTLNQSVAEGVIDLNNALSVQINGGQHVINFGFSQSAVVATQEMQR 236
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ P+P D+SFV+ G+ P GG+ RFPG +IPF+D+ F TP ++PYPT I
Sbjct 237 LMALPVGMRPDPSDLSFVLAGNPATPNGGIFTRFPGMHIPFVDLTFTSPTPPDTPYPTTI 296
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Y QYD + P++PL ILSD+N M H YP L V NAV LPTSP YTGNT
Sbjct 297 YATQYDPTSDFPRYPLNILSDLNTLMS-LGQHELYPNL---DVSNAVQLPTSPDYTGNTT 352
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMF+T++LPLL+P+R IP+ G PIAD QP LRVLVDLGY+D+G G +YA++PTPA LF
Sbjct 353 YYMFMTKNLPLLEPVRAIPFIGNPIADFIQPDLRVLVDLGYSDWGSGQDYANVPTPATLF 412
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
IPNPF + L+ G++ + V+ GL+ P++YP++PS++ LNF+ GQP
Sbjct 413 PIPNPFVIGTDLVIGAVHGS----TALAVDLGLLPASALPNAYPYLPSLDTDLNFFLGQP 468
Query 478 QVTLLSLMSGGLGNILHLIP 497
VT +SL++ +G +L +P
Sbjct 469 GVTDISLVTNAIGPVLQRLP 488
>gi|240168171|ref|ZP_04746830.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=489
Score = 401 bits (1030), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 251/501 (51%), Positives = 330/501 (66%), Gaps = 17/501 (3%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M+HL+ AP+M+ +AA + +I S + AA AAAAG T N+LAAA DEVSAA A LF YG+
Sbjct 1 MTHLIAAPEMMVSAATNAVKIGSAISAAGAAAAGSTTNVLAAAADEVSAAIAKLFGTYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E QA + QAAAFH EF + L A YA AEAAN VS+A + + API LL P++
Sbjct 61 ELQAALTQAAAFHDEFVQALAGAATTYAQAEAANTCAVSNAFNALLAPIENLLAPPPVN- 119
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
GA A L S + ALIMGGT +P P P YVT IN A+IQ LFPGA + GL
Sbjct 120 ----GATTPTPSAPLPLGSTV-ALIMGGTFDPQPFPVYVTTINGAYIQFLFPGANAAGLT 174
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
P QFWP+T +LGNLT N+S+ +GV LN A+ +QL + V+ FG+SQS+ + N + +
Sbjct 175 YPAQFWPLTLNLGNLTINESIAQGVVDLNNAITSQLNASHNVIDFGFSQSSVVATNEMYA 234
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LM + P+P +SFV+ G+ P GG+ RFPGF+IP LD+ F TP NSPYPT I
Sbjct 235 LMNLPPGQRPDPSQLSFVLAGNPATPNGGIFTRFPGFHIPVLDLTFTPDTPPNSPYPTKI 294
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
+ QYD + PQFPL L+D+NA M H+ YP L ++AV LPTSPGY GNTQ
Sbjct 295 FATQYDPTSDFPQFPLNFLADLNAIMSTGQ-HDLYPNL---DPNDAVALPTSPGYNGNTQ 350
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMF+T++LPLL+P+R IP+ G P+ADL QP LRVLVDLGY D+G G +YA+I TPA LF
Sbjct 351 YYMFMTRNLPLLEPLRAIPFIGRPLADLIQPDLRVLVDLGYTDWGSGQDYANIATPASLF 410
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
IP+P V L +G+++ A+V+I GL+ P++YP++PS++ LNF+ GQP
Sbjct 411 GIPDPLVVGTDLARGAVEGTQAALVDI----GLLPQSALPNAYPYLPSLDTNLNFFLGQP 466
Query 478 QVTLLSLMSGGLGNILHLIPP 498
T +SL + +G +L LIPP
Sbjct 467 TDTTISLFTRAVGPLLDLIPP 487
>gi|240168170|ref|ZP_04746829.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=511
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 241/501 (49%), Positives = 329/501 (66%), Gaps = 16/501 (3%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M+HL+ AP+M+ +AA +I S++ AA AAAAG T N+LAAA DEVSAA A LF YG+
Sbjct 1 MTHLIAAPEMMVSAATSAVKIGSSISAAGAAAAGSTTNVLAAAADEVSAAIAKLFGTYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
+ QA + QA AFH EF +TL A YA AEAANAA V++AL +NA +++LL +P
Sbjct 61 QLQAALTQATAFHDEFVQTLAGAATTYAQAEAANAAAVANALGGLNAQVQSLL-----AP 115
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
+ +A A + AL+MGGT +P P P YV+ IN ++I+ FPGA G+
Sbjct 116 AVGNATTAPTVMAAAAPAASAVALVMGGTFDPEPFPLYVSLINSSYIKPFFPGANPTGVS 175
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
P Q WP+T GNLT N+SV +G+ L A+ +Q+ N VV FG+SQSA + N I
Sbjct 176 YPAQLWPLTIFQGNLTLNESVAQGMTDLTNAIYSQIGAGNTVVNFGFSQSAVVSTNVITQ 235
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
LMA+ P+P +SFV+ G+ P GG RFPG IP+LD+ F ATP +SPYPT I
Sbjct 236 LMALPPGMRPDPSQLSFVLAGNPATPNGGFFTRFPGITIPWLDITFTEATPPDSPYPTTI 295
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Y QYD + P++PL +L+D+NA M H YP L V++AVPLPTSPGY GNTQ
Sbjct 296 YATQYDPASDFPRYPLNLLADLNALMSTGR-HELYPNL---DVNDAVPLPTSPGYNGNTQ 351
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
YYMF+T+DLPLL P+R IP+ G P+A+L QP LRVLVDLGY+D+G G +YA++ TPA LF
Sbjct 352 YYMFMTKDLPLLDPLRAIPFVGEPLAELIQPDLRVLVDLGYSDWGNGQDYANVVTPASLF 411
Query 418 SIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQP 477
SIP+PF V L+ G+++ ++VE+GV + P+ YP++P ++ +NFY GQP
Sbjct 412 SIPDPFVVGRELVDGTVKGVQASLVELGV----LPQSALPNEYPYLPDLDTDVNFYVGQP 467
Query 478 QVTLLSLMSGGLGNILHLIPP 498
VT +S+++ +G +L +IPP
Sbjct 468 TVTDISVLTRAVGPLLDMIPP 488
>gi|289568057|ref|ZP_06448284.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289541810|gb|EFD45459.1| predicted protein [Mycobacterium tuberculosis T17]
Length=315
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/322 (58%), Positives = 231/322 (72%), Gaps = 16/322 (4%)
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
+TPEQ+WP +GNL+ +QS+ +GV LLN +N +L + VV FGYSQSA + N I
Sbjct 5 YTPEQWWPF---IGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIR 61
Query 240 SLMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTH 296
+LMA+ +P+P ++F +IG+ NNP GG+L R+ G Y+PFLD+ FNGATP +SPY T+
Sbjct 62 ALMALPPGQAPDPSRLAFTLIGNINNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTY 121
Query 297 IYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNT 356
+YT QYDG AH PQ+PL ILSD+NAFMG +VHN YP A +V NAVPLPTSPGYTGNT
Sbjct 122 MYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYP-FTAAEVANAVPLPTSPGYTGNT 180
Query 357 QYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGL 416
YYMFLTQDLPLLQPIR IP+ G PIA+L QP LRVLVDLGY G YAD+PTPA L
Sbjct 181 HYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGY-----GYGYADVPTPASL 235
Query 417 FSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQ 476
F+ NP AV L G++Q P A+V I GL+ P++YP++PS NPGL F FGQ
Sbjct 236 FAPINPIAVASALATGTVQGPQAALVSI----GLLPQSALPNTYPYLPSANPGLMFNFGQ 291
Query 477 PQVTLLSLMSGGLGNILHLIPP 498
VT LS++SG LG++ LIPP
Sbjct 292 SSVTELSVLSGALGSVARLIPP 313
>gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacterium marinum M]
gi|183173727|gb|ACC38837.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/442 (45%), Positives = 273/442 (62%), Gaps = 30/442 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+L+ P++LA+ A +D I S + A AAAGPT +LLAAAGDEVS A A LFS YGR
Sbjct 1 MSYLLAEPELLASVATEIDGIGSAISTAGTAAAGPTSSLLAAAGDEVSGAIANLFSVYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRA--PL 118
E QAV+ Q AF SEF +TL AAG AYA EAA+ A + AL +A P
Sbjct 61 ECQAVLAQVEAFRSEFAQTLAAAGVAYAQTEAASLAALRGALGIPSAAPAVSSASTIPPF 120
Query 119 SPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQG 178
+ N +T+L +G T P+PD YV N F+++ + +
Sbjct 121 TAN-------------------LTSLFLGPTGVPIPDESYVQAANNLFVRS---SDILRP 158
Query 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLAL-DNKVVAFGYSQSATIINNY 237
L+TPE+ +P+T + +LT N SV EG+ +L+ A+ QL++ N V FGYSQSA I +
Sbjct 159 LYTPEELYPLT-GVKSLTLNASVEEGLTILDNAIMAQLSIPGNSVTVFGYSQSAIIASLE 217
Query 238 INSLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPT 295
+ L A+G +P ++FV++G+ NP GG+LARFP +P L + F GATP+++ YPT
Sbjct 218 MQKLAALGPSAPTASQLNFVLVGNEMNPNGGMLARFPDLSLPSLGLTFYGATPSDTIYPT 277
Query 296 HIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGN 355
IYT +YDG A P++PL ++D+NA MG +VH Y +L A QVD+A+ LPTSPGY+G
Sbjct 278 AIYTLEYDGFADFPRYPLNFIADLNAVMGIPFVHVKYLDLTAAQVDSAIELPTSPGYSGV 337
Query 356 TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTP 413
T YY+ T++LPLL+P+R IP G P+A+L QP L+V+V+LGY D YG +YAD+ TP
Sbjct 338 TSYYVIPTENLPLLEPLRAIPVIGNPLANLIQPDLKVIVNLGYGDPNYGYSTSYADVRTP 397
Query 414 AGLFSIPNPFAVTYYLIKGSLQ 435
GLF +P + L G+ +
Sbjct 398 FGLFPDVSPGTIVDALAAGTQE 419
>gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacterium marinum M]
gi|183177282|gb|ACC42392.1| PPE family protein [Mycobacterium marinum M]
Length=594
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 196/433 (46%), Positives = 265/433 (62%), Gaps = 23/433 (5%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M++++T PD+L TAAA + +I S + ANAAAA PT ++AAAGDEVS A LFSAYG+
Sbjct 1 MTYVITQPDILTTAAADIADIRSAIGVANAAAASPTTAMMAAAGDEVSQLIAKLFSAYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E QAV+ AA FH F TL AAG+ Y AEAA A +S AL T+++PIR LLG S
Sbjct 61 ECQAVITDAAVFHDHFAATLAAAGSVYTQAEAAGTATLSQALTTLSSPIRALLGGTAAST 120
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPG--AVSQG 178
+G+ A A AA PI L++GG+ NP+P P Y++++ F+ FP A+ QG
Sbjct 121 SGAMAA----AAPMAAAGDPIYTLVVGGSGNPIPSPAYISNVVSKFVAPYFPVDPALVQG 176
Query 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALL-NTAVNNQ------LALDNKVVAFGYSQSA 231
LFTP QF+ + + L N SV +GVA+L NT V L N V G SQSA
Sbjct 177 LFTPAQFY-IDTGIKTLPLNVSVPQGVAILTNTLVGTNPPYLGLLTSGNTVNVTGDSQSA 235
Query 232 TIINNYINSLM-----AMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGA 286
I + + +L A GSP DD++F + G+ NP GGL ARFPG +P + + F G+
Sbjct 236 MIASLVMRALNPTNSGAAGSPYFDDLTFSLFGNPMNPNGGLFARFPGLSLPSMGLDFYGS 295
Query 287 TPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPL 346
TP NS +PT+++T +YDG A P++P+ L+D+NAF+G +H YP L Q+D A+PL
Sbjct 296 TPDNS-FPTNVFTLEYDGAADFPRYPINFLADLNAFLGIQSLHGQYPSLTPEQLDTAIPL 354
Query 347 PTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPG 404
+ G T +T YYM + LPLL P+R IP G PIADL +P LR LV+ GY D YG
Sbjct 355 TNTVGPT-STNYYMIPSPHLPLLDPVRAIPVIGTPIADLIEPDLRYLVNWGYGDPAYGWS 413
Query 405 GNYADIPTPAGLF 417
+ ++PTP G+
Sbjct 414 TSPPNVPTPFGVL 426
>gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacterium marinum M]
gi|183173728|gb|ACC38838.1| PE family protein [Mycobacterium marinum M]
Length=582
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 196/447 (44%), Positives = 273/447 (62%), Gaps = 13/447 (2%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M+++ P+ + T AA ++ I ST+ AA+AAAAGPT L++AA DEVS A A LF YG+
Sbjct 1 MTYVFVEPETITTMAADLEGIGSTIDAASAAAAGPTSRLVSAAADEVSTAIAGLFGGYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
+YQAVV AAAFH +FT+T+ AAG AYA EA++ A +S+AL+ +LLG
Sbjct 61 QYQAVVAHAAAFHQQFTQTVAAAGLAYAQTEASSVAAISNALEAFGTQAHSLLGGG---- 116
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
N ++ A +I P +L+MGG+ NPLP P+Y+ D +I F SQ LF
Sbjct 117 NAAASATPSASITTTPLTGPTVSLVMGGSGNPLPGPDYLADFFN-YITPQFGVTTSQALF 175
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPEQ +P+T + +L SV++GV +L+ A+ Q+A N VV GYSQSA I + + +
Sbjct 176 TPEQLYPLTGE-KSLPLAISVSQGVQILHNAILGQIAEGNSVVVGGYSQSAIIASLEMQN 234
Query 241 LMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L AM +P D + F+++ + NP GGLL+RF G +P L V F G+TPA++ YPT I
Sbjct 235 LAAMPPGTAPTADQLGFLLLANPMNPNGGLLSRFAGLTLPSLGVDFYGSTPADTIYPTSI 294
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQV--DNAVPLPTSPGYTGN 355
YT +YDG A P++PL I+SD+NA G +VH P + + + + L TS YTGN
Sbjct 295 YTHEYDGFADFPRYPLNIVSDLNAIAGIAFVHTDTPTINPETLPPGDLIKLDTSADYTGN 354
Query 356 TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTP 413
T YY+ T+ LPLL+P+R IP G P+ADL QP L +V+LGY D YG A+I TP
Sbjct 355 TSYYLIHTERLPLLEPLRFIPVVGNPLADLLQPDLTTIVNLGYGDPRYGYSTAPANIETP 414
Query 414 AGLFSIPNPFAVTYYLIKGSLQAPYGA 440
GLF +P V L+ G+ Q + A
Sbjct 415 FGLFPEVDPKVVAQQLVIGTQQGFHSA 441
>gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacterium marinum M]
gi|183176742|gb|ACC41852.1| PE family protein [Mycobacterium marinum M]
Length=549
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/440 (44%), Positives = 263/440 (60%), Gaps = 27/440 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M+ LV P ++AT A V+EI S + AN AAG + AAAGDEVSAA A+ F+A+G+
Sbjct 1 MAFLVAEPQVMATVAGQVEEIGSAIGVANEFAAGSISGVAAAAGDEVSAAIASFFAAHGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
YQAV Q AFH+EF + L AGNAY AEAA AA ++ AL
Sbjct 61 AYQAVAGQVEAFHTEFQQALAQAGNAYVQAEAAGAAALAGALGVPATSAAAP-------- 112
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
A + +T L+MGGT P+P P ++ N+ ++++ GL
Sbjct 113 ----------AATIPPFPANLTTLVMGGTGIPIPGPGFINLANELYVRS---ANALLGLN 159
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLAL-DNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T +LT + SV+EG+ +L+ A+ QLA+ N V FG SQSA I + +
Sbjct 160 TPEELYPLT-GTKSLTLDASVSEGLTILDNAIMEQLAIPGNTVTVFGVSQSAVIASLEMQ 218
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L A+G +P ++FV++G+ NP GGLLARFP IP L + F G TP+++ YPT
Sbjct 219 KLAALGPAAPTASQLNFVLLGNEMNPNGGLLARFPDLSIPSLGLTFYGGTPSDTIYPTAN 278
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +SD+NA MG YVH TY +L QVDNA+PL TSPGY+G T
Sbjct 279 YTLEYDGFADFPRYPLNFISDLNAVMGIVYVHPTYLDLTQAQVDNAIPLATSPGYSGVTS 338
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T++LPLL+P+R IP G P+A+L QP L+VLV+LGY D YG + ADI TP G
Sbjct 339 YYILPTENLPLLEPLRAIPVIGNPLANLIQPDLKVLVNLGYGDPAYGYSTSPADITTPFG 398
Query 416 LFSIPNPFAVTYYLIKGSLQ 435
LF P + L+ G+ Q
Sbjct 399 LFPDVPPHVIADALVAGTKQ 418
>gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|254233542|ref|ZP_04926868.1| PE family protein [Mycobacterium tuberculosis C]
gi|254366603|ref|ZP_04982647.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|13879644|gb|AAK44384.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|124603335|gb|EAY61610.1| PE family protein [Mycobacterium tuberculosis C]
gi|134152115|gb|EBA44160.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323717137|gb|EGB26346.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=588
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 191/449 (43%), Positives = 263/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N +A V A + P S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAATNAFVNAEATNTSALVQEATAGL---------FKPTS 149
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 150 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 198
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 199 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 257
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 258 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 316
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSDINA G VH TY +L Q+ +A LPT G T NT
Sbjct 317 YTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 374
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 375 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 434
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 435 LFPDVPASVVADALVAGTQQGVNDFMVEL 463
>gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacterium marinum M]
gi|183173726|gb|ACC38836.1| PE family protein [Mycobacterium marinum M]
Length=589
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 197/445 (45%), Positives = 264/445 (60%), Gaps = 20/445 (4%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M++++T P +L +AAA V+ I L ANAAAAGPT +L+AAA DEVS A A LF Y
Sbjct 1 MTYMMTQPQLLTSAAADVEGIRWALTQANAAAAGPTTSLVAAAADEVSTAAAKLFGGYAL 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQ+V+ AFH EF RTL AAG AYA AEA N A +S AL+ + PI++LLG
Sbjct 61 EYQSVIGHVTAFHEEFVRTLAAAGTAYAGAEAVNTATISGALNALRTPIQSLLGGGA--- 117
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQ--G 178
S+ A G A+A A P ALIMGG+ P+P P+Y+ D + PG +Q
Sbjct 118 -ASTVAAGGAAVAPAALADPFVALIMGGSGTPIPPPDYLQD-----VAPYIPGMPTQLLP 171
Query 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAV---NNQLALDNKVVAFGYSQSATIIN 235
L TPE +P+T + +L N SV GV +L+ A+ + L N V GYSQSA + +
Sbjct 172 LNTPEGLYPLTA-IKDLPLNTSVANGVQILDNALFGPQGLITLGNNVNVLGYSQSAVVSS 230
Query 236 NYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPT 295
+ +L A+GSPN D+++F ++G+ P GGLL+RFPG +P L + F G TP+N+ Y
Sbjct 231 LEMRNLQALGSPNTDNLAFTLLGNPMAPNGGLLSRFPGLSLPALGLDFYGGTPSNTGYEL 290
Query 296 HIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVD---NAVPLPTSPGY 352
+ YT YDG A PQ+PL +L+D+NAF G +VH YP+L + N V LP SPG
Sbjct 291 NQYTLLYDGYADFPQYPLNLLADLNAFAGIQFVHGDYPDLDPNNLPAGYNLVQLPVSPGN 350
Query 353 TGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADI 410
G YYM LP+L+P+R IP G P+ADL +P L LV+LGY D YG YAD+
Sbjct 351 NGLENYYMITYPGLPILEPLRAIPVIGNPLADLVEPNLTYLVNLGYGDPNYGYSTGYADV 410
Query 411 PTPAGLFSIPNPFAVTYYLIKGSLQ 435
TP GL +P ++ G+ Q
Sbjct 411 TTPFGLLPPIDPVDFAGAMVNGTQQ 435
>gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552402|ref|ZP_06441612.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|297632625|ref|ZP_06950405.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
6 more sequence titles
Length=588
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/449 (43%), Positives = 262/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA A+ +AEA N +A V A + P S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAAKAFVNAEATNTSALVQEATAGL---------FKPTS 149
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 150 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 198
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 199 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 257
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 258 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 316
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSDINA G VH TY +L Q+ +A LPT G T NT
Sbjct 317 YTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 374
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 375 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 434
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 435 LFPDVPASVVADALVAGTQQGVNDFMVEL 463
>gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=560
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 196/452 (44%), Positives = 266/452 (59%), Gaps = 40/452 (8%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M +++ P M+ATAAA ++ I + +A+AAAAGPT +L AAA DEVSAA A LF AYGR
Sbjct 1 MPYVLADPQMMATAAADLERIGVAVGSASAAAAGPTSSLAAAAADEVSAAIANLFGAYGR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQA+V AF +EF RTL AAG YA +EA NAA VS ++ +PL+
Sbjct 61 EYQAIVNLLKAFQAEFARTLAAAGLVYAQSEATNAATVSASITA-----------SPLT- 108
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
P +LIMGG+ NP P +YV D+ +I F +Q LF
Sbjct 109 ------------------GPTVSLIMGGSGNPTPGIDYVNDLLN-YISPQFGATNAQALF 149
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQL-ALDNKVVAFGYSQSATIINNYIN 239
TPEQ +P+T + +L SV++GV +L+ A+ +++ L N VV GYSQSA I + +
Sbjct 150 TPEQLYPLTGE-KSLPLTTSVSQGVQILHNAILSEVNTLGNSVVVGGYSQSAIIASLEMR 208
Query 240 SLMAM---GSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTH 296
+L AM +P D + FV++ + NP GGLL+RF G +P L V F GATPA++ YPT
Sbjct 209 NLAAMPPGTAPPADRLGFVLLANPMNPNGGLLSRFAGLSLPSLGVEFFGATPADTIYPTS 268
Query 297 IYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQV--DNAVPLPTSPGYTG 354
IYT +YDG A P++PL I+SD+NA G +VH PE+ + + + LPT P Y G
Sbjct 269 IYTHEYDGFADFPRYPLNIVSDLNAIAGIAFVHTDTPEINPQTLPPGDLIKLPTEPTYNG 328
Query 355 NTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPT 412
NT YY+ T LPLL P+R IP G P+ADL +P L +V+LGY D YG A++PT
Sbjct 329 NTSYYIIRTHHLPLLTPLRFIPVLGNPLADLVEPNLTTIVNLGYGDPRYGYSTAPANVPT 388
Query 413 PAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
P GLF +P V L+ G+ Q A+ +I
Sbjct 389 PFGLFPEVDPAVVAGELVTGTQQGFNAAVNDI 420
>gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=584
Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 183/433 (43%), Positives = 253/433 (59%), Gaps = 31/433 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M++++T PD L AAA V EI S + +ANAA T ++AAA DEVS A+LF AYG+
Sbjct 1 MTYMITQPDTLTAAAASVAEIRSAIGSANAATVASTTGVIAAARDEVSELIASLFRAYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E QAV+ QA AFH F ++L A +YA AEAANAA V+ AL I++P+R +LG
Sbjct 61 ECQAVMTQAGAFHDAFAQSLATAATSYAQAEAANAATVTEALAAISSPVRAMLG------ 114
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGA--VSQG 178
G P + + + + + L+MGG+ NP+P ++V +I +I FP Q
Sbjct 115 ------GAAPLTSAVPSAAAVNTLVMGGSGNPIPSIDFVNNIVSRYIAPFFPVDPNFVQS 168
Query 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALL-NTAVNNQ------LALDNKVVAFGYSQSA 231
LFTPE F+ + + L N SV +GV +L NT V L N V G SQSA
Sbjct 169 LFTPEGFY-IDTGIKTLPLNVSVAQGVTILTNTLVGTNPPYAGLLTSGNTVNVSGESQSA 227
Query 232 TIINNYINSLM-----AMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGA 286
I + + SL A GSP ++++F ++G+ NP GGL RF G +P L + GA
Sbjct 228 MIASLVMRSLNPTNSGAAGSPYFNNLNFSLVGNPMNPNGGLFERFVGLSLPSLGIEMYGA 287
Query 287 TPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPL 346
TP N+ +PT I+T +YDG A P++P+ +L+D+NAFMG +H Y L Q+ A+PL
Sbjct 288 TPDNA-FPTKIFTIEYDGAADFPRYPINVLADLNAFMGIQSLHGQYATLTPEQLATAIPL 346
Query 347 PTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPG 404
+ G T +T YYM TQ+LPLL P+R IP+ G PIADL QP LR LV+ GY D YG
Sbjct 347 TNTVGPT-STSYYMIPTQNLPLLDPVRAIPFVGKPIADLVQPNLRYLVNWGYGDPAYGWS 405
Query 405 GNYADIPTPAGLF 417
+ ++PTP G+
Sbjct 406 TSPPNVPTPFGVL 418
>gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacterium canettii CIPT 140010059]
gi|340003378|emb|CCC42498.1| pe family protein [Mycobacterium canettii CIPT 140010059]
Length=550
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 198/440 (45%), Positives = 269/440 (62%), Gaps = 26/440 (5%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+L+ P ++A AAA V I S + A+AAAAGPT L AAAGDEVSAA A LF AYG+
Sbjct 1 MSYLIAEPRIVAAAAAEVAGIGSAVSTASAAAAGPTSALAAAAGDEVSAAIAKLFGAYGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQAV+ Q AFHS F +TL AA + YA AEAA A+ + + L
Sbjct 61 EYQAVLAQVEAFHSRFHQTLAAAAHTYADAEAAIASTLQNQLAVP--------------- 105
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
++ A + +T L G T PLP P YV N ++++ GA+ Q +F
Sbjct 106 --AAAPTPAAAAMVPPFPANLTTLFFGPTGIPLPPPSYVDAANMLYVRS--AGAL-QAVF 160
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLAL-DNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L N SV EG+ +++ A+ +LA+ N V FG+SQSA I + ++
Sbjct 161 TPEELYPLT-GVRSLVLNTSVEEGLTIMHDAIMGELAIPGNTVTVFGWSQSAIIASLEMH 219
Query 240 SLMAMGSPNP--DDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L AMG P D++FV++G+ NP GG+LARFP +P L + F GATP+++ YPT I
Sbjct 220 RLAAMGPAAPPASDLNFVLVGNEMNPNGGMLARFPDLTLPSLGLTFYGATPSDTIYPTAI 279
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL I+SD+NA G +VH Y +L QVD A LPTSPGYTG T
Sbjct 280 YTLEYDGFADFPRYPLNIISDLNAVAGITFVHTKYLDLTPAQVDGATKLPTSPGYTGVTD 339
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T++LPLLQP+R +P G P+ADL QP L+V+V+LGY D YG +YAD+ TP G
Sbjct 340 YYIIRTENLPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFG 399
Query 416 LFSIPNPFAVTYYLIKGSLQ 435
L+ P + L G+ Q
Sbjct 400 LWPDVPPQVIADALAAGTQQ 419
>gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium tuberculosis SUMu001]
gi|308379707|ref|ZP_07487233.2| PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308380909|ref|ZP_07491451.2| PE family protein [Mycobacterium tuberculosis SUMu011]
7 more sequence titles
Length=560
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 191/449 (43%), Positives = 263/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 11 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 70
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N +A V A + P S
Sbjct 71 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGL---------FKPTS 121
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 122 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 170
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 171 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 229
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 230 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 288
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSDINA G VH TY +L Q+ +A LPT G T NT
Sbjct 289 YTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 346
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 347 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 406
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 407 LFPDVPASVVADALVAGTQQGVNDFMVEL 435
>gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636063|ref|YP_976286.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988536|ref|YP_002643223.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616914|emb|CAD93020.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491710|emb|CAL70171.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771649|dbj|BAH24455.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600079|emb|CCC62748.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=588
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 191/449 (43%), Positives = 263/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N +A V A + P S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGL---------FKPTS 149
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 150 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 198
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 199 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 257
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 258 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 316
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSDINA G VH TY +L Q+ +A LPT G T NT
Sbjct 317 YTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 374
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 375 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 434
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 435 LFPDVPASVVADALVAGTQQGVNDFMVEL 463
>gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339630233|ref|YP_004721875.1| PE family protein [Mycobacterium africanum GM041182]
gi|289537161|gb|EFD41739.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339329589|emb|CCC25225.1| PE family protein [Mycobacterium africanum GM041182]
Length=588
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 191/449 (43%), Positives = 263/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N +A V A + P S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGL---------FKPTS 149
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 150 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 198
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 199 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 257
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 258 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 316
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSDINA G VH TY +L Q+ +A LPT G T NT
Sbjct 317 YTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 374
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 375 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 434
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 435 LFPDVPASVVADALVAGTQQGVNDFMVEL 463
>gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659915|ref|YP_001281438.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|148821343|ref|YP_001286097.1| PE family protein [Mycobacterium tuberculosis F11]
25 more sequence titles
Length=588
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 191/449 (43%), Positives = 263/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N +A V A + P S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGL---------FKPTS 149
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 150 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 198
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 199 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 257
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 258 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 316
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSDINA G VH TY +L Q+ +A LPT G T NT
Sbjct 317 YTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 374
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 375 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 434
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 435 LFPDVPASVVADALVAGTQQGVNDFMVEL 463
>gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [Mycobacterium kansasii ATCC 12478]
Length=580
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 190/420 (46%), Positives = 243/420 (58%), Gaps = 39/420 (9%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS LV PDM+A+AA+ V I + + AAN AAA T LLAA DEVS AALF A+ R
Sbjct 1 MSFLVAEPDMMASAASDVARIGAAISAANDAAAATTTQLLAAGADEVSQGIAALFGAFAR 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
+YQAV Q AA+H R L A AY AEAAN RTLL P
Sbjct 61 DYQAVSAQIAAYHDHVVRALGAGAEAYTGAEAAN---------------RTLLQPLPNRT 105
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
G+ G GG T LIMG T NP P Y+ + +I+ +PG+ G+
Sbjct 106 VGAPGGGG------------PTVLIMGPTGNPGPSFRYLQQVYNLYIRPFYPGSPVLGVT 153
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIIN---NY 237
TPEQF P T + +LTF++SV G A L+ A+ Q A + VV G+SQSA++ Y
Sbjct 154 TPEQFQPFT-GIPSLTFDESVAAGAADLHAAIMAQHAAGHDVVVLGFSQSASVATAEMRY 212
Query 238 INSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
+ SL A P PD +SFV++G NNP GGLLARFPG ++ + + F+GATP+N YPT +
Sbjct 213 LASLPADLRPGPDQLSFVLLGDPNNPNGGLLARFPGLFVQPMGLTFSGATPSNL-YPTTV 271
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT QYDG A PQ+PL I +D+NA +G +Y H TY EL QV V P SP T
Sbjct 272 YTRQYDGFADFPQYPLNIPADLNALLGIYYAHGTYQELTPAQVAAGVVQPVSPADV-YTT 330
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Y + ++ LPLL+P+R I A P+ DL +P LRV+++LGY G YAD+PTPAGLF
Sbjct 331 YMLLPSEHLPLLEPLRGIVPA--PLLDLVEPDLRVIIELGYDRTG----YADVPTPAGLF 384
>gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308370327|ref|ZP_07421092.2| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308371602|ref|ZP_07425459.2| PE family protein [Mycobacterium tuberculosis SUMu004]
9 more sequence titles
Length=560
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 190/449 (43%), Positives = 262/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 11 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 70
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N +A V A + P S
Sbjct 71 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGL---------FKPTS 121
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 122 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 170
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 171 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 229
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 230 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 288
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSD NA G VH TY +L Q+ +A LPT G T NT
Sbjct 289 YTLEYDGFADFPRYPLNVLSDSNAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 346
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 347 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 406
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 407 LFPDVPASVVADALVAGTQQGVNDFMVEL 435
>gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|306970340|ref|ZP_07483001.1| PE family protein [Mycobacterium tuberculosis SUMu009]
gi|308347554|gb|EFP36405.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308352180|gb|EFP41031.1| PE family protein [Mycobacterium tuberculosis SUMu009]
Length=588
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 190/449 (43%), Positives = 262/449 (59%), Gaps = 29/449 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AA A PT L AAA DEVS A A LF AYG+
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAAN-AARVSHALDTINAPIRTLLGRAPLS 119
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N +A V A + P S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGL---------FKPTS 149
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P P + + ++ TA+IMGGT +P+P P YV I FI + V + L
Sbjct 150 P---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKAL 198
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 199 VTPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQ 257
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT
Sbjct 258 HLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTT 316
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSD NA G VH TY +L Q+ +A LPT G T NT
Sbjct 317 YTLEYDGFADFPRYPLNVLSDSNAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT- 374
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YY+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP G
Sbjct 375 YYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFG 434
Query 416 LFSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
LF V L+ G+ Q +VE+
Sbjct 435 LFPDVPASVVADALVAGTQQGVNDFMVEL 463
>gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacterium marinum M]
gi|183177617|gb|ACC42727.1| PE family protein [Mycobacterium marinum M]
Length=588
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 190/466 (41%), Positives = 260/466 (56%), Gaps = 22/466 (4%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
M L+ +P + A V EI + A+ A AGPT L AAA DEVS A A LF Y +
Sbjct 1 MIDLLASPQAMTATATEVAEIGLAINQADLAVAGPTTGLAAAAADEVSEAIATLFDNYAQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
YQAV +QAAAFH F +TL AA ++Y AEAA ++ + P+ L AP+
Sbjct 61 GYQAVSRQAAAFHDAFAQTLFAASDSYVRAEAAAVKALAG----LTEPVANLF--APVLS 114
Query 121 NGSSGAGGLPAIAQLAAESPI-TALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVS-QG 178
S A A+ A P+ ALI+ + P P Y++D+ +++ FP A + QG
Sbjct 115 GPESVAASATALLSGAPLKPVEAALILSESGVPTPSASYISDVYTKYVEPNFPSATAPQG 174
Query 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLA---LDNKVVAFGYSQSATIIN 235
+ TP +P T + +LT + S+ G +LN A+ QLA + V GYSQSA + +
Sbjct 175 VSTPNGLYPFT-GIKDLTLDISLARGATILNDAILQQLAALPAGSSVAVLGYSQSAVLSS 233
Query 236 NYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPT 295
+ L+A G + ++FV++G+ NP GG+LARFP +P L F GATP N+ +PT
Sbjct 234 LVMPKLLAEGVTS-SQVNFVLLGNPMNPNGGVLARFPDLTLPSLGFTFYGATPDNA-FPT 291
Query 296 HIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGN 355
YT +YDG A P++P+ +L+DINA MG +VH Y L Q+D+AV LPT G T +
Sbjct 292 VSYTLEYDGFADFPRYPINLLADINAVMGIPFVHADYQHLTQAQLDSAVQLPTE-GPTQS 350
Query 356 TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTP 413
T YYM T+ LPLL P+R IPY G P+A+L +P LRVLV+LGY D YG A++PTP
Sbjct 351 T-YYMIPTEHLPLLAPLRFIPYVGDPLAELLEPNLRVLVNLGYGDPAYGYDTGPANVPTP 409
Query 414 AGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDS 459
GLF +P V +L G+ Q IV G GP P S
Sbjct 410 FGLFPPVSPLTVAEHLAAGTQQ----GIVNSGAALQAQGPPSIPLS 451
>gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=546
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 184/443 (42%), Positives = 248/443 (56%), Gaps = 38/443 (8%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS+++T P +A AA + I + + A A+ AGPT + AA DEVSAA A LF A+G+
Sbjct 1 MSYVLTQPPAMAAAATELAGIGTAISEAAASVAGPTTTIATAAADEVSAAIAQLFGAFGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
EYQA+ Q A +++FT+ L AA NAY EA +AA + T
Sbjct 61 EYQAINAQLGALYNQFTQNLAAAANAYFGDEAISAATLVKGATT---------------- 104
Query 121 NGSSGAGGL----PAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVS 176
GL A TA++M GT +P+P +YV I F L PG V
Sbjct 105 -------GLFTPTSPPVVPPAFGQNTAIVMSGTGSPIPSIQYVAAITNLF---LPPGMVV 154
Query 177 QGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINN 236
L T E+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I +
Sbjct 155 NPLNTIEELYPIT-GVKSLPFQNSVQTGLQILDAAIWEQIHAGNHVTVFGYSQSAVISSL 213
Query 237 YINSLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYP 294
I L+++G P+P +SF+ IG+ NP GG+L+R PG I L +PF GAT A++PYP
Sbjct 214 EIQQLLSLGPNKPDPSQLSFIFIGNEMNPNGGILSRIPGLNISTLGLPFYGAT-ADNPYP 272
Query 295 THIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTG 354
T YT +YDG A P++PL +LSDINA G VH Y L QV NA+ LPT G T
Sbjct 273 TTTYTLEYDGFADFPRYPLNVLSDINAVFGIITVHTQYQYLTPQQVANAILLPTE-GVTS 331
Query 355 NTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPT 412
N QY++ T LPLL P+R IP GPP+A L +P LRVLV+LGY D +G + A++PT
Sbjct 332 N-QYFIIPTAHLPLLDPVRAIPVIGPPLAALIEPDLRVLVNLGYGDPRFGYSTSPANVPT 390
Query 413 PAGLFSIPNPFAVTYYLIKGSLQ 435
P GLF P + L+ G+ Q
Sbjct 391 PFGLFPDVPPGVIVDALVAGTHQ 413
>gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacterium marinum M]
gi|183173729|gb|ACC38839.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 192/474 (41%), Positives = 267/474 (57%), Gaps = 35/474 (7%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS++V P +A AA + I S L A AAAAGPT +L+AA DEVS A A L +G
Sbjct 1 MSYVVAQPPAIAAAATELTGIGSALSEATAAAAGPTTAILSAAADEVSTAIAQLLGTFGA 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAA-NAARVSHALDTINAPIRTLLGRAPLS 119
EYQ + Q AAFH++ + L N Y +AE NAA + A + +P P
Sbjct 61 EYQGISTQLAAFHAQIAQRLATVANYYINAEEINNAALLEEATAGLYSP-----NSPPTV 115
Query 120 PNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGL 179
P A + A+ MGGT P+P Y+ +N +IQ + PGA+++ L
Sbjct 116 P---------------AVFNDYVAIAMGGTGTPIPSTSYLDAVNTLYIQHIAPGAIAKAL 160
Query 180 FTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYIN 239
FTPEQ +P+T + +L F SV EG+ +L+ ++ N++ N V FGYSQSA I + +
Sbjct 161 FTPEQLYPIT-GVKSLPFQTSVQEGLKILDISIWNEINAGNHVTVFGYSQSAVIASLEMQ 219
Query 240 SLMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
+++G +P+P I+F++ G+ NP GG+LAR PG + L +PF GATP N PY T
Sbjct 220 HFISLGPNAPDPSQINFILTGNEMNPNGGILARIPGLNVASLGLPFYGATPDN-PYYTTT 278
Query 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
YT +YDG A P++PL +LSD+NA G VH TYP+L Q+ +A LPT TG
Sbjct 279 YTLEYDGFADFPRYPLNVLSDVNAVFGILTVHRTYPDLTPEQIASATLLPTEGPTTGT-- 336
Query 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAG 415
YYM T++LPLL P+R IP G P+A L QP L+VLV+LGY D YG + A++PTP G
Sbjct 337 YYMIRTENLPLLDPVRAIPVIGEPLAALVQPDLKVLVNLGYGDPNYGYSTSPANVPTPFG 396
Query 416 LFSIPNPFAVTYYLIKGSLQA--PYGAIVEIGVEAG-LIGPEWFPDSYPWVPSI 466
LF + V L+ G+ Q +GA + + I P FP P+V S+
Sbjct 397 LFPDVSLQVVADALVAGTHQGINDFGAALPTALSTTPQIAPLEFP---PYVQSV 447
>gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003377|emb|CCC42497.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=588
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 190/448 (43%), Positives = 263/448 (59%), Gaps = 27/448 (6%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
+S++ P +LA AA + I S + A AAAA PT L AAA DEVS A A LF AYG+
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAAAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
++QA+ Q AAFH+EFT+ L AA NA+ +AEA N + H + R P SP
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTTALVH--EATAGLFR------PTSP 150
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF 180
P + + ++ TA+IMGGT +P+P P Y+ I FI + V + L
Sbjct 151 ---------PVLPPMFNQN--TAIIMGGTGSPIPTPSYLNAITTLFIDPVVSNPVIKALV 199
Query 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS 240
TPE+ +P+T + +L F SV G+ +L+ A+ Q+ N V FGYSQSA I + +
Sbjct 200 TPEELYPIT-GVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQH 258
Query 241 LMAMG--SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIY 298
L+++G +P+P ++F++IG+ NP GG+LAR PG + L +PF GATP N PYPT Y
Sbjct 259 LISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN-PYPTTTY 317
Query 299 TAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQY 358
T +YDG A P++PL +LSDINA G VH TY +L Q+ +A LPT G T NT Y
Sbjct 318 TLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQ-GTTSNT-Y 375
Query 359 YMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGPGGNYADIPTPAGL 416
Y+ T+ LPLL P+R IP GPP+A L +P L V+V+LGY D +G + A++PTP GL
Sbjct 376 YIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGL 435
Query 417 FSIPNPFAVTYYLIKGSLQAPYGAIVEI 444
F V L+ G+ Q +VE+
Sbjct 436 FPDVPASVVADALVAGTQQGVNDFMVEL 463
>gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004634|emb|CCC43778.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=528
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/431 (44%), Positives = 252/431 (59%), Gaps = 45/431 (10%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS + P+M+A A+ + + + L A AAAA PT +LAAA DEVSAA A LF A+G+
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E+QA+ QA+AFH F R L AA Y AEAANAA V A
Sbjct 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTA------------------A 102
Query 121 NGSS--GAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQG 178
G+S G+GG TALI+G T P P +Y+ + +I + G G
Sbjct 103 TGASELGSGGR------------TALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSG 150
Query 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIIN--- 235
L+TP QF P T + +LT++QSV EG L+TA+ Q+A N VV G+SQ A++
Sbjct 151 LYTPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEM 209
Query 236 NYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPT 295
++ SL A +P+PD +SFV++G+ NNP GG+LARFPG Y+ L + FNGATP ++ Y T
Sbjct 210 RHLASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYAT 268
Query 296 HIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGN 355
IYT QYDG A P++PL IL+D+NA +G +Y H+ Y L QV + + LP S T N
Sbjct 269 TIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-N 327
Query 356 TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAG 415
T Y + +DLPLLQP+R I P+ DL +P LR +++LGY G YAD+PTPA
Sbjct 328 TTYILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAA 381
Query 416 LFSIP-NPFAV 425
LF + +P AV
Sbjct 382 LFPVRIDPIAV 392
>gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792624|ref|NP_855117.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116862|ref|YP_177810.1| PE family protein [Mycobacterium tuberculosis H37Rv]
71 more sequence titles
Length=528
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/431 (44%), Positives = 252/431 (59%), Gaps = 45/431 (10%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MS + P+M+A A+ + + + L A AAAA PT +LAAA DEVSAA A LF A+G+
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
E+QA+ QA+AFH F R L AA Y AEAANAA V A
Sbjct 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTA------------------A 102
Query 121 NGSS--GAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQG 178
G+S G+GG TALI+G T P P +Y+ + +I + G G
Sbjct 103 TGASELGSGGR------------TALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSG 150
Query 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIIN--- 235
L+TP QF P T + +LT++QSV EG L+TA+ Q+A N VV G+SQ A++
Sbjct 151 LYTPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEM 209
Query 236 NYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPT 295
++ SL A +P+PD +SFV++G+ NNP GG+LARFPG Y+ L + FNGATP ++ Y T
Sbjct 210 RHLASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYAT 268
Query 296 HIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGN 355
IYT QYDG A P++PL IL+D+NA +G +Y H+ Y L QV + + LP S T N
Sbjct 269 TIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-N 327
Query 356 TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAG 415
T Y + +DLPLLQP+R I P+ DL +P LR +++LGY G YAD+PTPA
Sbjct 328 TTYILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAA 381
Query 416 LFSIP-NPFAV 425
LF + +P AV
Sbjct 382 LFPVHIDPIAV 392
>gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacterium marinum M]
gi|183176777|gb|ACC41887.1| PE family protein [Mycobacterium marinum M]
Length=575
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/465 (39%), Positives = 251/465 (54%), Gaps = 42/465 (9%)
Query 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
MSHLVT P ++ AA + I +++ A+ A G T L AAA DEVSAA A +FS +G
Sbjct 1 MSHLVTQPQLMTAAAEDLVGIQTSIAEASIAVGGRTTGLAAAAADEVSAAIADVFSVFGE 60
Query 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
+YQA +Q A+H+ F +TL A+ NAY HAEA A +S
Sbjct 61 DYQAFARQVEAYHNAFVQTLTASANAYGHAEADAQALLS--------------------- 99
Query 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDI----NKAFIQTLFPGAVS 176
GS+ A G AQ + ++GG+ NP+P YV + N+AF + P +
Sbjct 100 -GSTAASGGAPSAQATLQGTTFGWMIGGSGNPIPSQTYVNKVLPYVNEAF--GVLP-ENA 155
Query 177 QGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALD--NKVVAFGYSQSATI- 233
+ LFTPE P+ + +L N SV +GV +L+ + + LA + V GYSQSA I
Sbjct 156 KALFTPEGLQPIYTGIKSLPLNTSVDQGVQILDQTIKSTLAAHPGDSVAVLGYSQSAIIS 215
Query 234 ---INNYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPAN 290
+ + +N + P P ++ F ++G+ NP GGLL+RF G +P L + F G+TP +
Sbjct 216 SLEMRDLMNPALNPTPPLPTELGFTLLGNPMNPNGGLLSRFVGLNVPSLGLDFYGSTPPD 275
Query 291 SPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSP 350
+PYPT+IYT QYDG A P++PL +LSD+NAF+G +H YP+L + + T P
Sbjct 276 TPYPTNIYTLQYDGFASFPRYPLNLLSDLNAFLGIQTIHGQYPDLDPANLPPGYEMVTLP 335
Query 351 GYT-----GNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD--YGP 403
G G T YYM +LP+ P+R IP G P+ADL +P +R+LV+LGY D YG
Sbjct 336 GSASLTGQGQTNYYMITHPNLPITAPLRAIPVIGDPLADLIEPNMRILVNLGYGDPNYGY 395
Query 404 GGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEA 448
+ A++PTP GLF N V L G+ Q I +I A
Sbjct 396 STSPANVPTPFGLFPDVNYLEVAGMLADGTQQGGNAFIADISAMA 440
Lambda K H
0.318 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1083597119368
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40