BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0167
Length=265
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [M... 509 1e-142
gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a... 508 4e-142
gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yr... 507 9e-142
gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycob... 474 7e-132
gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A... 473 9e-132
gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Myc... 473 1e-131
gi|342859379|ref|ZP_08716033.1| hypothetical protein MCOL_10883 ... 473 1e-131
gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574... 468 4e-130
gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1... 461 4e-128
gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A... 460 1e-127
gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [... 458 3e-127
gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycoba... 456 2e-126
gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [My... 432 3e-119
gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 ... 424 7e-117
gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [M... 411 5e-113
gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycob... 409 2e-112
gi|342858889|ref|ZP_08715543.1| hypothetical protein MCOL_08433 ... 407 7e-112
gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Myc... 407 9e-112
gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycob... 403 1e-110
gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [M... 402 2e-110
gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [My... 399 3e-109
gi|333988760|ref|YP_004521374.1| hypothetical protein JDM601_012... 394 8e-108
gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a... 390 1e-106
gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A... 379 3e-103
gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcu... 355 4e-96
gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobac... 327 1e-87
gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycob... 325 4e-87
gi|342862240|ref|ZP_08718882.1| hypothetical protein MCOL_25241 ... 323 1e-86
gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobac... 323 1e-86
gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [M... 323 2e-86
gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacte... 322 4e-86
gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 ... 317 2e-84
gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c ... 316 2e-84
gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [My... 316 2e-84
gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2... 315 3e-84
gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 ... 315 4e-84
gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodoco... 315 5e-84
gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [M... 315 6e-84
gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [M... 314 8e-84
gi|342860430|ref|ZP_08717081.1| hypothetical protein MCOL_16186 ... 314 9e-84
gi|333992272|ref|YP_004524886.1| hypothetical protein JDM601_363... 313 1e-83
gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 ... 313 2e-83
gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcu... 312 3e-83
gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_1389... 311 5e-83
gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycob... 311 6e-83
gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avi... 311 6e-83
gi|336461223|gb|EGO40099.1| ABC-type transport system involved i... 311 8e-83
gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium... 310 1e-82
gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocar... 310 1e-82
gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [My... 310 1e-82
>gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis
H37Rv]
gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551]
gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=265
Score = 509 bits (1312), Expect = 1e-142, Method: Compositional matrix adjust.
Identities = 264/265 (99%), Positives = 265/265 (100%), Gaps = 0/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+TTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP
Sbjct 1 MTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA
Sbjct 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV
Sbjct 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLCVIALFAVNVILTTIGVRFGTGR
Sbjct 241 VLCVIALFAVNVILTTIGVRFGTGR 265
>gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
K85]
gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
K85]
Length=265
Score = 508 bits (1308), Expect = 4e-142, Method: Compositional matrix adjust.
Identities = 263/265 (99%), Positives = 264/265 (99%), Gaps = 0/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+TTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP
Sbjct 1 MTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA
Sbjct 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLN LVITVGLVGGFLFGVYLQ
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFLFGVYLQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV
Sbjct 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLCVIALFAVNVILTTIGVRFGTGR
Sbjct 241 VLCVIALFAVNVILTTIGVRFGTGR 265
>gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T46]
gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T17]
gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T92]
gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T46]
gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T17]
gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T92]
gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
Length=265
Score = 507 bits (1305), Expect = 9e-142, Method: Compositional matrix adjust.
Identities = 263/265 (99%), Positives = 264/265 (99%), Gaps = 0/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+TTS TLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP
Sbjct 1 MTTSITLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA
Sbjct 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV
Sbjct 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLCVIALFAVNVILTTIGVRFGTGR
Sbjct 241 VLCVIALFAVNVILTTIGVRFGTGR 265
>gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459862|gb|EGO38774.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=271
Score = 474 bits (1219), Expect = 7e-132, Method: Compositional matrix adjust.
Identities = 238/257 (93%), Positives = 252/257 (99%), Gaps = 0/257 (0%)
Query 9 GYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPL 68
GY+RDQL+TPLTLVGGFFRMCVLTGKALFRWPFQWREF+LQCWFIMRV FLPTIMVSIPL
Sbjct 15 GYLRDQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPL 74
Query 69 TVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 128
TVLLIFTLN+LLAQFGAAD+SG+GAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR
Sbjct 75 TVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 134
Query 129 EEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYL 188
EEIDAMEVLGIDPIHRLVVPRV+A+ LVATLLNGLVITVGLVGG+LFGVYLQNVSGGAYL
Sbjct 135 EEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYL 194
Query 189 ATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALF 248
ATLT ITGLPEVVIAT+KAA FGLIAGLVGC+RGLTVRGGSKGLGTAVNETVVLCV+AL+
Sbjct 195 ATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALY 254
Query 249 AVNVILTTIGVRFGTGR 265
AVNV+LTTIGVRFGTG
Sbjct 255 AVNVVLTTIGVRFGTGH 271
>gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=271
Score = 473 bits (1218), Expect = 9e-132, Method: Compositional matrix adjust.
Identities = 237/257 (93%), Positives = 252/257 (99%), Gaps = 0/257 (0%)
Query 9 GYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPL 68
GY+RDQLQTPLT++GGFFRMCVLTG+ALFRWPFQWREF+LQCWFIMRV FLPTIMVSIPL
Sbjct 15 GYLRDQLQTPLTVIGGFFRMCVLTGRALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPL 74
Query 69 TVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 128
TVLLIFTLN+LLAQFGAAD+SG+GAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR
Sbjct 75 TVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 134
Query 129 EEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYL 188
EEIDAMEVLGIDPIHRLVVPRV+A+ LVATLLNGLVITVGLVGG+LFGVYLQNVSGGAYL
Sbjct 135 EEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYL 194
Query 189 ATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALF 248
ATLT ITGLPEVVIAT+KAA FGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCV+AL+
Sbjct 195 ATLTTITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALY 254
Query 249 AVNVILTTIGVRFGTGR 265
AVNV+LTTIGVRFGTG
Sbjct 255 AVNVVLTTIGVRFGTGH 271
>gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104]
gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=258
Score = 473 bits (1218), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 238/257 (93%), Positives = 252/257 (99%), Gaps = 0/257 (0%)
Query 9 GYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPL 68
GY+RDQL+TPLTLVGGFFRMCVLTGKALFRWPFQWREF+LQCWFIMRV FLPTIMVSIPL
Sbjct 2 GYLRDQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPL 61
Query 69 TVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 128
TVLLIFTLN+LLAQFGAAD+SG+GAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR
Sbjct 62 TVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 121
Query 129 EEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYL 188
EEIDAMEVLGIDPIHRLVVPRV+A+ LVATLLNGLVITVGLVGG+LFGVYLQNVSGGAYL
Sbjct 122 EEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYL 181
Query 189 ATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALF 248
ATLT ITGLPEVVIAT+KAA FGLIAGLVGC+RGLTVRGGSKGLGTAVNETVVLCV+AL+
Sbjct 182 ATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALY 241
Query 249 AVNVILTTIGVRFGTGR 265
AVNV+LTTIGVRFGTG
Sbjct 242 AVNVVLTTIGVRFGTGH 258
>gi|342859379|ref|ZP_08716033.1| hypothetical protein MCOL_10883 [Mycobacterium colombiense CECT
3035]
gi|342133620|gb|EGT86823.1| hypothetical protein MCOL_10883 [Mycobacterium colombiense CECT
3035]
Length=259
Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 239/257 (93%), Positives = 251/257 (98%), Gaps = 0/257 (0%)
Query 9 GYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPL 68
GYVRDQL+TPLTLVGGFFRMCVLTGKALFRWPFQ+REFI QCWFIMRV FLPTIMVSIPL
Sbjct 3 GYVRDQLETPLTLVGGFFRMCVLTGKALFRWPFQYREFIQQCWFIMRVAFLPTIMVSIPL 62
Query 69 TVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 128
TVLLIFTLN+LLAQFGAAD+SG+GAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR
Sbjct 63 TVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 122
Query 129 EEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYL 188
EEIDAMEVLGIDPIHRLVVPRV+A+ LVATLLNGLVITVGLVGG+LFGVYLQNVSGGAYL
Sbjct 123 EEIDAMEVLGIDPIHRLVVPRVVAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYL 182
Query 189 ATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALF 248
ATLT ITGLPEVVIAT+KAA FGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCV+AL+
Sbjct 183 ATLTTITGLPEVVIATVKAAVFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALY 242
Query 249 AVNVILTTIGVRFGTGR 265
AVNV+LTTIGVRFGTG
Sbjct 243 AVNVVLTTIGVRFGTGH 259
>gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare
ATCC 13950]
Length=255
Score = 468 bits (1204), Expect = 4e-130, Method: Compositional matrix adjust.
Identities = 236/255 (93%), Positives = 249/255 (98%), Gaps = 0/255 (0%)
Query 11 VRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTV 70
+RDQLQTPL LVGGFFRMCVLTGKALFRWPFQWREF+LQCWFIMRV FLPTIMVSIPLTV
Sbjct 1 MRDQLQTPLELVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTV 60
Query 71 LLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 130
LLIFTLN+LLAQFGAAD+SG+GAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE
Sbjct 61 LLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLAT 190
IDAMEVLGIDPIHRLVVPRV+A+ LVATLLNGLVITVGLVGG+LFGVYLQNVSGGAYLAT
Sbjct 121 IDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLAT 180
Query 191 LTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAV 250
LT ITGLPEVVIAT+KAA FGLIAGLVGC+RGLTVRGGSKGLGTAVNETVVLCV+AL+AV
Sbjct 181 LTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAV 240
Query 251 NVILTTIGVRFGTGR 265
NV+LTTIGVRFGTG
Sbjct 241 NVVLTTIGVRFGTGH 255
>gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M]
gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium
marinum M]
Length=267
Score = 461 bits (1187), Expect = 4e-128, Method: Compositional matrix adjust.
Identities = 235/267 (89%), Positives = 252/267 (95%), Gaps = 2/267 (0%)
Query 1 VTTST--TLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGF 58
+TTS+ L GY+RDQL+TPLT+VGGFFRMCVLTGKALFR PFQWRE ILQCWF+MRV
Sbjct 1 MTTSSGPHLMGYLRDQLETPLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVAL 60
Query 59 LPTIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAI 118
LPTIMVSIPLTVLLIFTLN+LLAQFGAADISG+GAAIGAVTQLGPLTTVLVVAGAGSTAI
Sbjct 61 LPTIMVSIPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAI 120
Query 119 CADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVY 178
CADLGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ VATLLN LVITVGLVGG+LFGVY
Sbjct 121 CADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVY 180
Query 179 LQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE 238
LQN++GGAYLATLT ITG+PEV IA +KAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE
Sbjct 181 LQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE 240
Query 239 TVVLCVIALFAVNVILTTIGVRFGTGR 265
TVVLCV+AL+AVNVILTTIGVRFGTG
Sbjct 241 TVVLCVVALYAVNVILTTIGVRFGTGH 267
>gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC
12478]
Length=268
Score = 460 bits (1183), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 232/264 (88%), Positives = 248/264 (94%), Gaps = 0/264 (0%)
Query 2 TTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPT 61
+T L GY+RDQL+TPLTLVGGFFRMCVLTGKALFR PFQWREFILQCWFIMRV LP
Sbjct 5 STRPHLMGYLRDQLETPLTLVGGFFRMCVLTGKALFRRPFQWREFILQCWFIMRVALLPA 64
Query 62 IMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICAD 121
I+VS+P TVLLIFTLN+LLAQFGAAD+SG+GAAIGAVTQLGP TVLVVAGAGSTAICAD
Sbjct 65 ILVSVPFTVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPQVTVLVVAGAGSTAICAD 124
Query 122 LGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQN 181
LGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ L+ATLLN LVITVGLVGG+LFGVYLQN
Sbjct 125 LGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGVYLQN 184
Query 182 VSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVV 241
VSGGAYLATLT ITGLPEVVIA +KAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVV
Sbjct 185 VSGGAYLATLTTITGLPEVVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVV 244
Query 242 LCVIALFAVNVILTTIGVRFGTGR 265
LCV+ALFAVNV+LTT+GVRFGTG
Sbjct 245 LCVVALFAVNVVLTTVGVRFGTGH 268
>gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99]
gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium
ulcerans Agy99]
Length=267
Score = 458 bits (1179), Expect = 3e-127, Method: Compositional matrix adjust.
Identities = 234/267 (88%), Positives = 251/267 (95%), Gaps = 2/267 (0%)
Query 1 VTTST--TLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGF 58
+TTS+ L GY+RDQL+T LT+VGGFFRMCVLTGKALFR PFQWRE ILQCWF+MRV
Sbjct 1 MTTSSGPHLMGYLRDQLETSLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVAL 60
Query 59 LPTIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAI 118
LPTIMVSIPLTVLLIFTLN+LLAQFGAADISG+GAAIGAVTQLGPLTTVLVVAGAGSTAI
Sbjct 61 LPTIMVSIPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAI 120
Query 119 CADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVY 178
CADLGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ VATLLN LVITVGLVGG+LFGVY
Sbjct 121 CADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVY 180
Query 179 LQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE 238
LQN++GGAYLATLT ITG+PEV IA +KAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE
Sbjct 181 LQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE 240
Query 239 TVVLCVIALFAVNVILTTIGVRFGTGR 265
TVVLCV+AL+AVNVILTTIGVRFGTG
Sbjct 241 TVVLCVVALYAVNVILTTIGVRFGTGH 267
>gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN]
gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923]
gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae]
gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923]
Length=267
Score = 456 bits (1172), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 232/263 (89%), Positives = 246/263 (94%), Gaps = 0/263 (0%)
Query 3 TSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTI 62
T ++L Y +LQTPL LVGGFFRM VLTGKALFR PFQWREFILQCWFIMRV FLPT+
Sbjct 5 TRSSLVEYAHTKLQTPLVLVGGFFRMLVLTGKALFRRPFQWREFILQCWFIMRVAFLPTV 64
Query 63 MVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADL 122
MVSIPLTVLLIFTLN+LLAQF AAD+SG+GAAIGAVTQLGPLTTVLVVAGAGST+ICADL
Sbjct 65 MVSIPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADL 124
Query 123 GARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNV 182
GARTIREEIDAMEVLGIDPIHRLVVPRVLA+ LVATLLNGLVITVGLVGG+LFGVYLQNV
Sbjct 125 GARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGVYLQNV 184
Query 183 SGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVL 242
SGGAYLATLT ITGLPEVVIAT+KAATFGLIAGLVGCYRGL VRGGS GLG AVNETVVL
Sbjct 185 SGGAYLATLTTITGLPEVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVL 244
Query 243 CVIALFAVNVILTTIGVRFGTGR 265
CV+AL+AVNV+LTTIGVRFGTG
Sbjct 245 CVVALYAVNVVLTTIGVRFGTGH 267
>gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1]
gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=265
Score = 432 bits (1110), Expect = 3e-119, Method: Compositional matrix adjust.
Identities = 220/264 (84%), Positives = 242/264 (92%), Gaps = 0/264 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+T+S+ L GYVR+Q++ L VGGF RMCVL GKA R PFQWREFILQ WF+MRV FLP
Sbjct 1 MTSSSNLTGYVREQVKPGLEAVGGFVRMCVLVGKATLRPPFQWREFILQSWFLMRVAFLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
T+ VSIPLTVLLIFTLNILLA+FGAAD+SG+GAAIGAVTQLGPL TVLVVAGAGSTAICA
Sbjct 61 TLAVSIPLTVLLIFTLNILLAEFGAADVSGAGAAIGAVTQLGPLVTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRV+AS VA LLNG VITVGLVGGF+FGVYLQ
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVVASTFVAILLNGAVITVGLVGGFIFGVYLQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
NVS GAY++TLTLITGLPEVVI+ +KAATFGLIAGLVGCYRGLTV GG+KG+GTAVNET+
Sbjct 181 NVSAGAYVSTLTLITGLPEVVISIVKAATFGLIAGLVGCYRGLTVAGGAKGVGTAVNETL 240
Query 241 VLCVIALFAVNVILTTIGVRFGTG 264
VLCVIALFAVNV+LTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTG 264
>gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK]
gi|315441804|ref|YP_004074683.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=265
Score = 424 bits (1090), Expect = 7e-117, Method: Compositional matrix adjust.
Identities = 215/264 (82%), Positives = 241/264 (92%), Gaps = 0/264 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+TT++ L GYVR+Q++ L VGGF RMCVL GKA FR PFQWREFILQ WF++RV FLP
Sbjct 1 MTTTSGLSGYVREQVKPGLLAVGGFVRMCVLVGKATFRTPFQWREFILQSWFLLRVAFLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
T+ VSIPLTVLLIFTLNILL +FGAADISG+GAA+GAVTQLGPL TVLVVAGAGSTAICA
Sbjct 61 TVAVSIPLTVLLIFTLNILLTEFGAADISGAGAALGAVTQLGPLVTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRV+AS VA LLNG VIT+GLVGGF+FGVYLQ
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVIASTFVAMLLNGAVITIGLVGGFIFGVYLQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
NVS GAY++TLTL+TGLPEV+I+ +KA TFGLIAGLVGCYRGLTV GG+KG+GTAVNET+
Sbjct 181 NVSAGAYVSTLTLVTGLPEVLISLVKALTFGLIAGLVGCYRGLTVAGGAKGVGTAVNETL 240
Query 241 VLCVIALFAVNVILTTIGVRFGTG 264
VLCVIALFAVNV+LTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTG 264
>gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str.
MC2 155]
gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=266
Score = 411 bits (1057), Expect = 5e-113, Method: Compositional matrix adjust.
Identities = 202/256 (79%), Positives = 233/256 (92%), Gaps = 0/256 (0%)
Query 10 YVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLT 69
Y+R QL+ PL VGGFF+M V+TGKALF PFQW+EF+LQ WF++RV FLPT+ VSIPLT
Sbjct 11 YLRGQLEKPLATVGGFFKMSVMTGKALFTRPFQWKEFVLQSWFLIRVAFLPTLAVSIPLT 70
Query 70 VLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIRE 129
VL+IFTLNILLA+FGAAD+SG+GAA+GAVTQLGPL TVLVVAGAGSTAICADLGART+RE
Sbjct 71 VLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTVRE 130
Query 130 EIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLA 189
EIDA+EVLGIDPI RLVVPRV+AS VA +LNG VIT+GLVGGF FGVY+QNVS GAY++
Sbjct 131 EIDALEVLGIDPIERLVVPRVVASTFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAYVS 190
Query 190 TLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFA 249
TLTL+TG PEV+I+ +KA FG+IAGLVGCYRGLTV GGSKG+GTAVNET+VLCV+ALFA
Sbjct 191 TLTLLTGFPEVLISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNETLVLCVVALFA 250
Query 250 VNVILTTIGVRFGTGR 265
VNV+LTTIGVRFGTGR
Sbjct 251 VNVVLTTIGVRFGTGR 266
>gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460598|gb|EGO39491.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=265
Score = 409 bits (1051), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 205/265 (78%), Positives = 237/265 (90%), Gaps = 0/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+++ + Y+R Q+Q + VGGFFR CVLTGKALFR PFQWRE I Q WFI V LP
Sbjct 1 MSSQAVIANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
T+ V+IPLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAGSTAICA
Sbjct 61 TLAVAIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRV+A+ +VATLLNG VIT+GLVGGF+FGV++Q
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
++S GAY+ TLTLITGLPEVVI+ +K+ATFG IAGLVGCYRGLT +GG KG+GTAVNET+
Sbjct 181 HISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLCVIALFAVNV+LTTIGVRFGTGR
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTGR 265
>gi|342858889|ref|ZP_08715543.1| hypothetical protein MCOL_08433 [Mycobacterium colombiense CECT
3035]
gi|342133130|gb|EGT86333.1| hypothetical protein MCOL_08433 [Mycobacterium colombiense CECT
3035]
Length=265
Score = 407 bits (1047), Expect = 7e-112, Method: Compositional matrix adjust.
Identities = 206/265 (78%), Positives = 236/265 (90%), Gaps = 0/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
++T T L Y+R Q+Q + VGGFFR C LTGKALFR PFQWRE I Q WFI V LP
Sbjct 1 MSTHTVLATYLRGQVQPGIDAVGGFFRTCALTGKALFRRPFQWRETIEQGWFITSVSLLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
T+ V+IPLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAGSTAICA
Sbjct 61 TLAVAIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRV+A+ +VATLLNG VIT+GLVGGF+FGV++Q
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
++S GAY+ TLTLITGLPEVVI+ +K+A FG IAGLVGCYRGLT +GG KG+GTAVNET+
Sbjct 181 HISAGAYVGTLTLITGLPEVVISVVKSAIFGTIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLCVIALFAVNV+LTTIGVRFGTGR
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTGR 265
>gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104]
gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=260
Score = 407 bits (1046), Expect = 9e-112, Method: Compositional matrix adjust.
Identities = 205/259 (80%), Positives = 234/259 (91%), Gaps = 0/259 (0%)
Query 7 LGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSI 66
+ Y+R Q+Q + VGGFFR CVLTGKALFR PFQWRE I Q WFI V LPT+ V+I
Sbjct 2 IANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAI 61
Query 67 PLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGART 126
PLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAGSTAICADLGART
Sbjct 62 PLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGART 121
Query 127 IREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGA 186
IREEIDA+EVLGIDPIHRLVVPRV+A+ +VATLLNG VIT+GLVGGF+FGV++Q++S GA
Sbjct 122 IREEIDALEVLGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGA 181
Query 187 YLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIA 246
Y+ TLTLITGLPEVVI+ +K+ATFG IAGLVGCYRGLT +GG KG+GTAVNET+VLCVIA
Sbjct 182 YVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIA 241
Query 247 LFAVNVILTTIGVRFGTGR 265
LFAVNV+LTTIGVRFGTGR
Sbjct 242 LFAVNVVLTTIGVRFGTGR 260
>gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
Length=265
Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 201/265 (76%), Positives = 232/265 (88%), Gaps = 0/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+TT + Y+RDQ Q + +GGF+R CVLTGKAL R PF WRE I Q WFI V LP
Sbjct 1 MTTHAVIIAYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
T+ VSIPLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAG+TAICA
Sbjct 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ +VA LLNG VIT+GLVGGF+F V++Q
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
+VS GAY+ TLTL+TGLPEV+I+ +K+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+
Sbjct 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLCVIALFA NV+LTTIGVRFGTG
Sbjct 241 VLCVIALFATNVVLTTIGVRFGTGH 265
>gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
H37Rv]
gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551]
gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97]
78 more sequence titles
Length=265
Score = 402 bits (1033), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 201/265 (76%), Positives = 232/265 (88%), Gaps = 0/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+TT + Y+RDQ Q + +GGF+R CVLTGKAL R PF WRE I Q WFI V LP
Sbjct 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
T+ VSIPLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAG+TAICA
Sbjct 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ +VA LLNG VIT+GLVGGF+F V++Q
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
+VS GAY+ TLTL+TGLPEV+I+ +K+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+
Sbjct 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLCVIALFA NV+LTTIGVRFGTG
Sbjct 241 VLCVIALFATNVVLTTIGVRFGTGH 265
>gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS]
gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS]
gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS]
gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=265
Score = 399 bits (1024), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 213/263 (81%), Positives = 240/263 (92%), Gaps = 1/263 (0%)
Query 3 TSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTI 62
+S L GYVRDQ++ L VGGF RMCVLTGKALFR PFQWREFILQ WF+ RV FLPT+
Sbjct 4 SSGGLTGYVRDQVRPGLEAVGGFVRMCVLTGKALFR-PFQWREFILQAWFLFRVSFLPTV 62
Query 63 MVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADL 122
VS+PLTVL+IFTLNILLA+FGAAD+SG+GAA+GAVTQLGPL TVLVVAGAGSTAICADL
Sbjct 63 AVSVPLTVLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADL 122
Query 123 GARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNV 182
GARTIREEIDA+EVLGIDPIHRLVVPRV+AS VA LLNG VIT+GLVGGF+FGVY+QNV
Sbjct 123 GARTIREEIDALEVLGIDPIHRLVVPRVVASTFVALLLNGAVITIGLVGGFIFGVYIQNV 182
Query 183 SGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVL 242
S GAY++TLTL+TGLPEV+I+ +KA TFGLIAGLVGCYRGLTV GG+KG+GT VNET+VL
Sbjct 183 SAGAYVSTLTLVTGLPEVLISVVKATTFGLIAGLVGCYRGLTVGGGAKGVGTGVNETLVL 242
Query 243 CVIALFAVNVILTTIGVRFGTGR 265
CV+ALFAVNV+LTTIGVRFGTGR
Sbjct 243 CVVALFAVNVVLTTIGVRFGTGR 265
>gi|333988760|ref|YP_004521374.1| hypothetical protein JDM601_0120 [Mycobacterium sp. JDM601]
gi|333484728|gb|AEF34120.1| integral membrane protein YrbE1A [Mycobacterium sp. JDM601]
Length=267
Score = 394 bits (1012), Expect = 8e-108, Method: Compositional matrix adjust.
Identities = 206/255 (81%), Positives = 230/255 (91%), Gaps = 0/255 (0%)
Query 10 YVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLT 69
+ RD++ PL +VGGFFRMC LT +ALF PFQWRE + Q WFI V +PT+ V+IPLT
Sbjct 12 FARDRVMPPLVMVGGFFRMCALTARALFMPPFQWRETLQQGWFITSVALVPTVAVAIPLT 71
Query 70 VLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIRE 129
VLL+FTLNILLAQFGAAD+SG+GA I AVTQLGPL TVLVVAGAGSTAICADLGARTIRE
Sbjct 72 VLLVFTLNILLAQFGAADVSGAGAGIAAVTQLGPLVTVLVVAGAGSTAICADLGARTIRE 131
Query 130 EIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLA 189
EIDAMEVLGIDPIHRLVVPRV+A+ +VA LLN LVI +GL GGFLFGVYLQNVSGGAYL+
Sbjct 132 EIDAMEVLGIDPIHRLVVPRVIAATVVALLLNALVIVIGLAGGFLFGVYLQNVSGGAYLS 191
Query 190 TLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFA 249
TLTL+TGLPEV+I+T+KA+ FGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFA
Sbjct 192 TLTLLTGLPEVIISTVKASVFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFA 251
Query 250 VNVILTTIGVRFGTG 264
VNV+LTTIGV+FGTG
Sbjct 252 VNVVLTTIGVKFGTG 266
>gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=243
Score = 390 bits (1001), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 199/241 (83%), Positives = 224/241 (93%), Gaps = 1/241 (0%)
Query 25 FFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLAQFG 84
F +MCVLTGKAL R PFQWREFILQ WF++ V FLPT+MV+IPLTVL+IFTLNILLA+FG
Sbjct 4 FTQMCVLTGKALAR-PFQWREFILQGWFLLGVSFLPTVMVAIPLTVLIIFTLNILLAEFG 62
Query 85 AADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHR 144
AAD+SG+GAA+GAVTQLGPL TVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHR
Sbjct 63 AADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHR 122
Query 145 LVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVVIAT 204
LVVPRV+AS +VA LLNG VI++GLVGGFLFGVY+QNVS GAY++TLTLITGLPEV+I+
Sbjct 123 LVVPRVVASTIVALLLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLPEVLISI 182
Query 205 IKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNVILTTIGVRFGTG 264
+KA FGLIAGLVGCYRGLT GG+KG+GTAVNET+VL V+ALFAVNV+LTTIGVRFGTG
Sbjct 183 VKATLFGLIAGLVGCYRGLTAGGGAKGVGTAVNETLVLAVVALFAVNVVLTTIGVRFGTG 242
Query 265 R 265
R
Sbjct 243 R 243
>gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=264
Score = 379 bits (972), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 209/265 (79%), Positives = 229/265 (87%), Gaps = 1/265 (0%)
Query 1 VTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
+TTS + V +L+ + GGFFRMCVLTGKAL + PF+WREFI WF+MRV LP
Sbjct 1 MTTSHPVASKVGSRLRPGTEVAGGFFRMCVLTGKAL-KQPFEWREFIWNGWFLMRVSLLP 59
Query 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
TI VSIP TVLLIFTLN+LLA+ GAAD+SG+GAAIGAVTQLGP+ TVLVVAGAG TAICA
Sbjct 60 TIAVSIPETVLLIFTLNLLLAEIGAADVSGAGAAIGAVTQLGPIVTVLVVAGAGGTAICA 119
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRV+AS +VA LLNGLV+ VGL GG+LF VYLQ
Sbjct 120 DLGARTIREEIDALEVLGIDPIHRLVVPRVVASTMVAVLLNGLVVAVGLGGGYLFSVYLQ 179
Query 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
NVS GAYL+TLT +TGLPEVVIA IKAATFGLIAGLVGCYRGL VRGGSKGLGTAVNETV
Sbjct 180 NVSSGAYLSTLTALTGLPEVVIAFIKAATFGLIAGLVGCYRGLIVRGGSKGLGTAVNETV 239
Query 241 VLCVIALFAVNVILTTIGVRFGTGR 265
VLC IALFAVN LTTIGVRFGTGR
Sbjct 240 VLCFIALFAVNAALTTIGVRFGTGR 264
>gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4]
gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4]
Length=267
Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 175/248 (71%), Positives = 212/248 (86%), Gaps = 0/248 (0%)
Query 17 TPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTL 76
T L VGGFF +C T +A+ + PFQWRE +LQ WFI+RV LPT++V++P TVL++FTL
Sbjct 19 TGLRAVGGFFELCGETFRAMAKRPFQWRELVLQSWFIVRVALLPTLLVALPFTVLVVFTL 78
Query 77 NILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEV 136
NILL +FGAAD+SG+GA +GAVTQ+GPL TVL+VAGAG+TAICADLGARTIREEIDA+ V
Sbjct 79 NILLVEFGAADLSGAGAGLGAVTQIGPLVTVLIVAGAGATAICADLGARTIREEIDAIRV 138
Query 137 LGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITG 196
LGIDPI RLVVPRVLASM VA LLNGLVIT+GL GGFLF VY+QNV+ GAY+++LT +TG
Sbjct 139 LGIDPIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSVYIQNVTPGAYVSSLTFVTG 198
Query 197 LPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNVILTT 256
LPEV+I+ +KA FGLIAGLV C+RGLTV+GG K +G AVNETVV +ALFAVNV++T
Sbjct 199 LPEVIISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVNETVVYAFMALFAVNVVVTA 258
Query 257 IGVRFGTG 264
IGV+FGTG
Sbjct 259 IGVKFGTG 266
>gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=254
Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 201/250 (81%), Gaps = 0/250 (0%)
Query 11 VRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTV 70
+R+QL P VGGFF M + TG+A FR PFQ EF+ Q W I RV +PT++VSIP TV
Sbjct 1 MREQLAVPARAVGGFFEMMIDTGRATFRRPFQLGEFLEQTWMIARVSLVPTLLVSIPFTV 60
Query 71 LLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 130
L+ FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLAT 190
IDAM VLGIDP+HRLVVPRVLAS +VA LLNGLV +GL GG++F V+LQ V+ GA++
Sbjct 121 IDAMRVLGIDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180
Query 191 LTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAV 250
LT++TGL E+V+A +KA FG++AGLVGCYRGLTV+GG KG+G AVNETVV I LF +
Sbjct 181 LTVLTGLRELVLAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240
Query 251 NVILTTIGVR 260
NV++T IGVR
Sbjct 241 NVVMTAIGVR 250
>gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104]
gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458448|gb|EGO37422.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=254
Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/248 (67%), Positives = 200/248 (81%), Gaps = 0/248 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
+QL P VGGFF M + TG+A FR PFQ+ EF+ Q W I RV +PT++VSIP TVL+
Sbjct 3 EQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGIDPIHRLVVPRVLAS +VA LLNGLV +GL GG++F V+LQ V+ GA++ LT
Sbjct 123 AMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
++TGL E+V+A +KA FG++AG+VGCYRGLTV+GG KG+G AVNETVV I LF +NV
Sbjct 183 VLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINV 242
Query 253 ILTTIGVR 260
++T IGVR
Sbjct 243 VMTAIGVR 250
>gi|342862240|ref|ZP_08718882.1| hypothetical protein MCOL_25241 [Mycobacterium colombiense CECT
3035]
gi|342130318|gb|EGT83638.1| hypothetical protein MCOL_25241 [Mycobacterium colombiense CECT
3035]
Length=254
Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/250 (66%), Positives = 201/250 (81%), Gaps = 0/250 (0%)
Query 11 VRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTV 70
+R+QL P VGGFF M + TG+A FR PFQ+ EF+ Q W I RV +PT++VSIP TV
Sbjct 1 MREQLAVPARAVGGFFEMMLDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTV 60
Query 71 LLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 130
L+ FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLAT 190
IDAM VLGIDPI RLVVPRVLAS +VA LLNGLV +GL GG++F V+LQ V+ GA++
Sbjct 121 IDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180
Query 191 LTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAV 250
LT++TGL E+V+A +KA FG++AG+VGCYRGLTV+GG KG+G AVNETVV I LF +
Sbjct 181 LTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240
Query 251 NVILTTIGVR 260
NV++T IGVR
Sbjct 241 NVVMTAIGVR 250
>gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478]
Length=254
Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/248 (66%), Positives = 198/248 (80%), Gaps = 0/248 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
QL P VGGFF M + TG+A R PFQ+REF+ Q W + RV +PT++VSIP TVL+
Sbjct 3 QQLAVPARAVGGFFEMSIDTGRAALRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGIDPI RLVVPRVLAS LVA LLNGLV +GL GG++F V+LQ V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
++TGL E+++A +KA FG++AGLVGCYRGLTV+GG KG+G AVNETVV I LF +NV
Sbjct 183 VLTGLRELILAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINV 242
Query 253 ILTTIGVR 260
++T IGVR
Sbjct 243 VMTAIGVR 250
>gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
H37Rv]
gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97]
gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str.
Pasteur 1173P2]
79 more sequence titles
Length=254
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/248 (67%), Positives = 197/248 (80%), Gaps = 0/248 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
QL P VGGFF M + T +A FR PFQ+REF+ Q W + RV +PT++VSIP TVL+
Sbjct 3 QQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGIDPI RLVVPRVLAS LVA LLNGLV +GL GG+ F V+LQ V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
++TGL E+++A IKA FG++AGLVGCYRGLTV+GG KG+G AVNETVV I LF +NV
Sbjct 183 VLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINV 242
Query 253 ILTTIGVR 260
++T IGVR
Sbjct 243 VMTAIGVR 250
>gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
Length=279
Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/248 (66%), Positives = 197/248 (80%), Gaps = 0/248 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
QL P VGGFF M + T +A FR PFQ+REF+ Q W + RV +PT++VSIP TVL+
Sbjct 28 QQLAVPARAVGGFFEMSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLV 87
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREEID
Sbjct 88 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 147
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGIDPI RLVVPRVLAS +VA LLNGLV +GL GG+ F V+LQ V+ GA++ LT
Sbjct 148 AMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLT 207
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
++TGL E+++A IKA FG++AGLVGCYRGLTV+GG KG+G AVNETVV I LF +NV
Sbjct 208 VLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINV 267
Query 253 ILTTIGVR 260
++T IGVR
Sbjct 268 VMTAIGVR 275
>gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M]
gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=268
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/246 (64%), Positives = 199/246 (81%), Gaps = 1/246 (0%)
Query 16 QTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFT 75
P+ VGG F M K FR PFQWREF+ Q WF+ RV LPT++V+IP TVL+ FT
Sbjct 19 SKPMQAVGGLFAMSADAIKFAFRRPFQWREFLEQSWFVARVAMLPTLLVAIPFTVLVSFT 78
Query 76 LNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAME 135
LNILL + GAAD+SG+GAA GAVTQ+GPL TVL+VAGAG+TA+CADLG+RTIREEIDAME
Sbjct 79 LNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAME 138
Query 136 VLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLIT 195
VLGI+P+ RLV PR+LAS LVA LLN LV+ +G+VGG++F V++Q+V+ GA+ A +TL+T
Sbjct 139 VLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLT 198
Query 196 GLPEVVIATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFAVNVIL 254
G+PEV+I+ +KAA FGLIAGLV CYRGLT+ GG+K +G AVNETVV ++LF VNV++
Sbjct 199 GVPEVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAVNETVVYAFMSLFVVNVVV 258
Query 255 TTIGVR 260
T IG+R
Sbjct 259 TAIGIR 264
>gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC
19977]
gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=255
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/250 (65%), Positives = 198/250 (80%), Gaps = 0/250 (0%)
Query 11 VRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTV 70
++ QL P VGGF M + T + +FR PFQ +EF+ Q WFI RV LPT++V+IP TV
Sbjct 1 MKQQLAAPARAVGGFVSMSLATFRNIFRRPFQGQEFLDQTWFIARVSLLPTLLVAIPFTV 60
Query 71 LLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 130
L+ FTLNILL + GAAD+SG+ A G VTQLGP+ TVLVVAGAG+TAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAATAFGTVTQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLAT 190
IDAM+VLGIDPI RLVVPRVLAS VA LLNGLV +G+VGG++F V+LQ V+ GA++
Sbjct 121 IDAMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFING 180
Query 191 LTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAV 250
LT++TGL E++I+ +KA FG+ AGLVGCYRGLTV+GG KG+G AVNETVV I LF +
Sbjct 181 LTVLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLFVI 240
Query 251 NVILTTIGVR 260
NV++T IGVR
Sbjct 241 NVVMTAIGVR 250
>gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS]
gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS]
gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=254
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/250 (65%), Positives = 197/250 (79%), Gaps = 0/250 (0%)
Query 11 VRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTV 70
+++QL P VGGF M + T FR PFQ+REF+ Q W I RV +PT++V+IP TV
Sbjct 1 MKEQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTV 60
Query 71 LLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 130
L+ FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLAT 190
IDAM VLGIDPI RLVVPRVLAS VA LLNGLV +GL GG++F V+LQ V+ GA++
Sbjct 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180
Query 191 LTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAV 250
LT++TGL E+V+A IKA FG++AGLVGCYRGLTV+GG KG+G AVNETVV I LF +
Sbjct 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI 240
Query 251 NVILTTIGVR 260
NVI+T +GVR
Sbjct 241 NVIMTAVGVR 250
>gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S]
gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S]
Length=275
Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/256 (61%), Positives = 204/256 (80%), Gaps = 0/256 (0%)
Query 9 GYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPL 68
G V D L+ PL GGFF M T +A+F PFQ REF+ Q WF+ RV +PT++V+IP
Sbjct 20 GNVVDLLEVPLRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPF 79
Query 69 TVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 128
TVL+ FT+NILL + GAAD+SG+GAA+GAVTQ+GP+ TVL+VAGAG+TAICADL ARTIR
Sbjct 80 TVLVSFTINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIR 139
Query 129 EEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYL 188
EEIDAM VLGI+PIHRLVVPRVLAS +VA LLNGLV T+G++GGFLF VY+Q+V+ GA++
Sbjct 140 EEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFV 199
Query 189 ATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALF 248
+TL+TG E++I+ +KA FG+IAGL+ Y G+ VRGG+K +G AVN+TVV +ALF
Sbjct 200 NGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALF 259
Query 249 AVNVILTTIGVRFGTG 264
VNV++T +G++ +G
Sbjct 260 VVNVLVTAVGIKLTSG 275
>gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS]
gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=254
Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/248 (66%), Positives = 196/248 (80%), Gaps = 0/248 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
+QL P VGGF M + T +FR PFQ+REF+ Q W I RV +PT++V+IP TVL+
Sbjct 3 EQLAAPARAVGGFVDMSIDTFVKMFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGIDPI RLVVPRVLAS VA LLNGLV +GL GG++F V+LQ V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
++TGL E+V+A IKA FG++AGLVGCYRGLTV+GG KG+G AVNETVV I LF +NV
Sbjct 183 VLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINV 242
Query 253 ILTTIGVR 260
I+T +GVR
Sbjct 243 IMTAVGVR 250
>gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
Length=263
Score = 315 bits (806), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/256 (61%), Positives = 204/256 (80%), Gaps = 0/256 (0%)
Query 9 GYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPL 68
G V D L+ PL GGFF M T +A+F PFQ REF+ Q WF+ RV +PT++V+IP
Sbjct 8 GNVVDLLEVPLRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPF 67
Query 69 TVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIR 128
TVL+ FT+NILL + GAAD+SG+GAA+GAVTQ+GP+ TVL+VAGAG+TAICADL ARTIR
Sbjct 68 TVLVSFTINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIR 127
Query 129 EEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYL 188
EEIDAM VLGI+PIHRLVVPRVLAS +VA LLNGLV T+G++GGFLF VY+Q+V+ GA++
Sbjct 128 EEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFV 187
Query 189 ATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALF 248
+TL+TG E++I+ +KA FG+IAGL+ Y G+ VRGG+K +G AVN+TVV +ALF
Sbjct 188 NGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALF 247
Query 249 AVNVILTTIGVRFGTG 264
VNV++T +G++ +G
Sbjct 248 VVNVLVTAVGIKLTSG 263
>gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str.
MC2 155]
gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=254
Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/248 (65%), Positives = 195/248 (79%), Gaps = 0/248 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
+QL P VGGF M + T +FR PFQ +EF+ Q W I RV +PT++V+IP TVL+
Sbjct 3 EQLAVPARAVGGFVEMSLDTFAKIFRRPFQLKEFLDQTWMIARVSLVPTLLVAIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGIDPI RLVVPRVLAS VA LLNGLV +GL GG++F V+LQ V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
++TGL E+V+A IKA FG++AGLVGCYRGLTV+GG KG+G AVNETVV I LF +NV
Sbjct 183 VLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINV 242
Query 253 ILTTIGVR 260
I+T +GVR
Sbjct 243 IMTAVGVR 250
>gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str.
MC2 155]
gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=257
Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/252 (64%), Positives = 200/252 (80%), Gaps = 1/252 (0%)
Query 14 QLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLI 73
L P+ VG F M + FR PFQ REF+ QCWFI RV PT++V+IP TVL+
Sbjct 6 NLSGPMQAVGALFSMSLDAIMFAFRRPFQGREFLDQCWFIARVSMAPTLLVAIPFTVLVS 65
Query 74 FTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDA 133
FTLNILL + GAAD+SG+GAA GAVTQLGP+ TVL+VAGAG+TA+CADLG+RTIREEIDA
Sbjct 66 FTLNILLRELGAADLSGAGAAFGAVTQLGPMVTVLIVAGAGATAMCADLGSRTIREEIDA 125
Query 134 MEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTL 193
MEVLGI+PI RLV PR+LAS LVA LLN LV+ +G++GG++F V++Q+V+ GA+ A +TL
Sbjct 126 MEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSVFIQDVNPGAFAAGITL 185
Query 194 ITGLPEVVIATIKAATFGLIAGLVGCYRGLT-VRGGSKGLGTAVNETVVLCVIALFAVNV 252
+TG+PEV+I+ IKAA FGLIAGLV CYRGLT V GG+K +G AVNETVV +ALF +NV
Sbjct 186 LTGVPEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAVNETVVYAFMALFVINV 245
Query 253 ILTTIGVRFGTG 264
++T IG+R TG
Sbjct 246 VVTAIGIRMTTG 257
>gi|342860430|ref|ZP_08717081.1| hypothetical protein MCOL_16186 [Mycobacterium colombiense CECT
3035]
gi|342132085|gb|EGT85326.1| hypothetical protein MCOL_16186 [Mycobacterium colombiense CECT
3035]
Length=260
Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 157/251 (63%), Positives = 201/251 (81%), Gaps = 1/251 (0%)
Query 11 VRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTV 70
++ L P+ VG F M K LFR PFQWREF+ Q WF+ RV PT++V+IP TV
Sbjct 6 LKFDLSGPMHAVGALFAMSADAVKFLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTV 65
Query 71 LLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 130
L+ FTLNILL + GAAD+SG+GAA GAVTQLGPL TVL+VAGAG+TA+CADLG+RTIREE
Sbjct 66 LVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREE 125
Query 131 IDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLAT 190
IDAMEVLGI+PI RLV PR+LAS LVA LLN LV+ +G++GG++F V++Q+V+ GA+ A
Sbjct 126 IDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAG 185
Query 191 LTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFA 249
+TL+TG+PEVVI+ +KAA FGLIAGLV CYRGL++ GG+K +G AVNETVV ++LF
Sbjct 186 ITLLTGVPEVVISCVKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFV 245
Query 250 VNVILTTIGVR 260
VNV++T IG++
Sbjct 246 VNVVVTAIGIK 256
>gi|333992272|ref|YP_004524886.1| hypothetical protein JDM601_3632 [Mycobacterium sp. JDM601]
gi|333488240|gb|AEF37632.1| membrane protein YrbE4A [Mycobacterium sp. JDM601]
Length=254
Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/248 (65%), Positives = 194/248 (79%), Gaps = 0/248 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
+QL P VGGF M + T +A+FR PFQ+REF+ Q W I RV +PT++V+IP TVL+
Sbjct 3 EQLTVPARAVGGFVEMSIDTFRAMFRRPFQYREFLDQTWMIARVSLVPTLLVAIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+G A G +TQLGP+ TVLVVAGAG+TAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGIDPI RLVVPR LAS VA LLNGLV +GLVGG++F V+LQ V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRALASTFVALLLNGLVCAIGLVGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
++TGL E+V+A IKA FG AGL+GCYRGLT +GG +G+G AVNETVV I LF +NV
Sbjct 183 VLTGLGELVMAEIKALLFGTAAGLIGCYRGLTAKGGPQGVGNAVNETVVYAFICLFVINV 242
Query 253 ILTTIGVR 260
++T I VR
Sbjct 243 VMTAISVR 250
>gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 [Rhodococcus jostii RHA1]
gi|110821198|gb|ABG96482.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=254
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/252 (62%), Positives = 201/252 (80%), Gaps = 0/252 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
D L+ PL VGGFF M T +A+F PFQ REF+ Q WF+ RV +PT++V+IP TVL+
Sbjct 3 DLLEVPLRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FT+NILL + GAAD+SG+GAA+G VTQ+GP+ TVL+VAGAG+TAICADL ARTIREEID
Sbjct 63 SFTINILLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGI+PIHRLVVPRVLAS +VA LLNGLV T+G++GGF+F VY+Q+V+ GA++ +T
Sbjct 123 AMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGIT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
L+TG E+VI+ +KA FG+IAGLV Y GL VRGG+K +G AVN+TVV +ALF VNV
Sbjct 183 LLTGFGELVISEVKAGLFGMIAGLVAAYLGLNVRGGAKSVGDAVNQTVVFSFMALFVVNV 242
Query 253 ILTTIGVRFGTG 264
++T +G++ G
Sbjct 243 LVTAVGIKLTAG 254
>gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcus opacus B4]
gi|226242694|dbj|BAH53042.1| putative YrbE family protein [Rhodococcus opacus B4]
Length=254
Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 155/252 (62%), Positives = 201/252 (80%), Gaps = 0/252 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
D L+ PL VGGFF M T +A+F PFQ REF+ Q WF+ RV +PT++V+IP TVL+
Sbjct 3 DLLEVPLRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLV 62
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FT+NILL + GAAD+SG+GAA+G VTQ+GP+ TVL+VAGAG+TAICADL ARTIREEID
Sbjct 63 SFTINILLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AM VLGI+PIHRLVVPRVLAS +VA LLNGLV T+G++GGF+F VY+Q+V+ GA++ +T
Sbjct 123 AMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGIT 182
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252
L+TG E+VI+ +KA FG+IAGLV Y GL V+GG+K +G AVN+TVV +ALF VNV
Sbjct 183 LLTGFGELVISEVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFSFMALFVVNV 242
Query 253 ILTTIGVRFGTG 264
++T +G++ G
Sbjct 243 LVTAVGIKLTAG 254
>gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC
12478]
Length=247
Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/240 (65%), Positives = 197/240 (83%), Gaps = 1/240 (0%)
Query 22 VGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLA 81
VGG F M K +FR PFQWREF+ Q WF+ RV PT++V+IP TVL+ FTLNILL
Sbjct 4 VGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVSMAPTLLVAIPFTVLVSFTLNILLR 63
Query 82 QFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDP 141
+ GAAD+SG+GAA GAVTQ+GPL TVL+VAGAG+TA+CADLG+RTIREEIDAMEVLGI+P
Sbjct 64 ELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGINP 123
Query 142 IHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVV 201
+ RLV PR+LAS LVA LLN LV+ +G++GG++F V++Q+V+ GA+ A +TL+TG+PEV+
Sbjct 124 VQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSVFVQDVNPGAFAAGITLLTGVPEVI 183
Query 202 IATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFAVNVILTTIGVR 260
I+ +KAA FGLIAGLV CYRGLTV GG+K +G AVNETVV ++LF VNV++T IG+R
Sbjct 184 ISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAIGIR 243
>gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=260
Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 196/240 (82%), Gaps = 1/240 (0%)
Query 22 VGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLA 81
VG F M K LFR PFQWREF+ Q WF+ RV PT++V+IP TVL+ FTLNILL
Sbjct 17 VGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLR 76
Query 82 QFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDP 141
+ GAAD+SG+GAA GAVTQLGPL TVL+VAGAG+TA+CADLG+RTIREEIDAMEVLGI+P
Sbjct 77 ELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGINP 136
Query 142 IHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVV 201
I RLV PR+LAS LVA LLN LV+ +G++GG++F V++Q+V+ GA+ A +TL+TG+PEVV
Sbjct 137 IQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGITLLTGVPEVV 196
Query 202 IATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFAVNVILTTIGVR 260
I+ IKAA FGLIAGLV CYRGL++ GG+K +G AVNETVV ++LF VNV++T IG++
Sbjct 197 ISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAIGIK 256
>gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=260
Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 196/240 (82%), Gaps = 1/240 (0%)
Query 22 VGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLA 81
VG F M K LFR PFQWREF+ Q WF+ RV PT++V+IP TVL+ FTLNILL
Sbjct 17 VGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLR 76
Query 82 QFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDP 141
+ GAAD+SG+GAA GAVTQLGPL TVL+VAGAG+TA+CADLG+RTIREEIDAMEVLGI+P
Sbjct 77 ELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGINP 136
Query 142 IHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVV 201
I RLV PR+LAS LVA LLN LV+ +G++GG++F V++Q+V+ GA+ A +TL+TG+PEVV
Sbjct 137 IQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGITLLTGVPEVV 196
Query 202 IATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFAVNVILTTIGVR 260
I+ IKAA FGLIAGLV CYRGL++ GG+K +G AVNETVV ++LF VNV++T IG++
Sbjct 197 ISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAIGIK 256
>gi|336461223|gb|EGO40099.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=272
Score = 311 bits (796), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 196/240 (82%), Gaps = 1/240 (0%)
Query 22 VGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLA 81
VG F M K LFR PFQWREF+ Q WF+ RV PT++V+IP TVL+ FTLNILL
Sbjct 29 VGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLR 88
Query 82 QFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDP 141
+ GAAD+SG+GAA GAVTQLGPL TVL+VAGAG+TA+CADLG+RTIREEIDAMEVLGI+P
Sbjct 89 ELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGINP 148
Query 142 IHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVV 201
I RLV PR+LAS LVA LLN LV+ +G++GG++F V++Q+V+ GA+ A +TL+TG+PEVV
Sbjct 149 IQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGITLLTGVPEVV 208
Query 202 IATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFAVNVILTTIGVR 260
I+ IKAA FGLIAGLV CYRGL++ GG+K +G AVNETVV ++LF VNV++T IG++
Sbjct 209 ISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAIGIK 268
>gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104]
gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104]
Length=272
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 196/240 (82%), Gaps = 1/240 (0%)
Query 22 VGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLA 81
VG F M K LFR PFQWREF+ Q WF+ RV PT++V+IP TVL+ FTLNILL
Sbjct 29 VGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLR 88
Query 82 QFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDP 141
+ GAAD+SG+GAA GAVTQLGPL TVL+VAGAG+TA+CADLG+RTIREEIDAMEVLGI+P
Sbjct 89 ELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLGINP 148
Query 142 IHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVV 201
I RLV PR+LAS LVA LLN LV+ +G++GG++F V++Q+V+ GA+ A +TL+TG+PEVV
Sbjct 149 IQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGITLLTGVPEVV 208
Query 202 IATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFAVNVILTTIGVR 260
I+ IKAA FGLIAGLV CYRGL++ GG+K +G AVNETVV ++LF VNV++T IG++
Sbjct 209 ISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAIGIK 268
>gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
gi|54014010|dbj|BAD55380.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
Length=263
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/254 (63%), Positives = 200/254 (79%), Gaps = 0/254 (0%)
Query 8 GGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIP 67
G + + L PL VGGFF + +A R PFQ REFI Q WFI RV +PT++V+IP
Sbjct 7 GSRMNEVLAVPLRAVGGFFELSADVARASVRRPFQAREFIDQSWFIARVSIVPTLLVAIP 66
Query 68 LTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTI 127
TVL+ FTLNILL + GAAD+SG+GAA GAVTQ+GP+ TVL+VAGAG+TAICADLGARTI
Sbjct 67 FTVLVSFTLNILLREIGAADLSGAGAAFGAVTQVGPIVTVLIVAGAGATAICADLGARTI 126
Query 128 REEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAY 187
REEIDAM VLGI+P+ RLVVPRVLASM VA +LN LV T+G+VGGFLF VYLQ+V+ GA+
Sbjct 127 REEIDAMRVLGINPVQRLVVPRVLASMFVALMLNSLVCTIGIVGGFLFSVYLQDVNPGAF 186
Query 188 LATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIAL 247
+ +TL+T LPE++I+ +KA FGLIAGLV CY GL V+GG K +G AVN+TVV +AL
Sbjct 187 VNGITLLTHLPELIISEVKAGLFGLIAGLVACYLGLNVKGGPKSVGDAVNQTVVFAFMAL 246
Query 248 FAVNVILTTIGVRF 261
F VNV++T +G++F
Sbjct 247 FVVNVVVTAVGIKF 260
>gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [Mycobacterium sp. MCS]
gi|119869778|ref|YP_939730.1| hypothetical protein Mkms_3746 [Mycobacterium sp. KMS]
gi|108771058|gb|ABG09780.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119695867|gb|ABL92940.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=270
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/252 (61%), Positives = 199/252 (79%), Gaps = 1/252 (0%)
Query 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72
L P+ VGG F M + +FR PFQWREF+ Q WF+ +V PT++V+IP TVL+
Sbjct 18 KNLAGPMAAVGGLFAMSADAIRNVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVLV 77
Query 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132
FTLNILL + GAAD+SG+GAA GAVTQ+GPL TVL+VAGAG+TA+CADLG+RTIREEI
Sbjct 78 SFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIS 137
Query 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192
AMEVLGIDP+ RLV PR+LAS LVA LLN LV+ +G++GG+ F V++Q+V+ GA+ A +T
Sbjct 138 AMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGIT 197
Query 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVR-GGSKGLGTAVNETVVLCVIALFAVN 251
L+TG+PE++I+ +KA FGLIAGLV CYRGLTV GG+K +G AVNETVV +ALFA+N
Sbjct 198 LLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAIN 257
Query 252 VILTTIGVRFGT 263
V++TT+G+ +
Sbjct 258 VLVTTVGIHMAS 269
Lambda K H
0.328 0.144 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 401076841216
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40