BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0168 Length=289 Score E Sequences producing significant alignments: (Bits) Value gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [M... 569 2e-160 gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane p... 568 2e-160 gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB] 568 4e-160 gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b... 567 6e-160 gi|340625205|ref|YP_004743657.1| hypothetical protein MCAN_01741... 566 1e-159 gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tubercu... 566 2e-159 gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1... 473 1e-131 gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [... 469 3e-130 gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cass... 467 1e-129 gi|342859378|ref|ZP_08716032.1| hypothetical protein MCOL_10878 ... 464 8e-129 gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Myc... 458 5e-127 gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycoba... 456 2e-126 gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569... 454 7e-126 gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_0265... 452 3e-125 gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 ... 445 3e-123 gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [My... 429 2e-118 gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 ... 419 3e-115 gi|333988761|ref|YP_004521375.1| hypothetical protein JDM601_012... 410 9e-113 gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [My... 407 7e-112 gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycob... 403 1e-110 gi|118471402|ref|YP_884549.1| ABC transporter transmembrane prot... 389 4e-106 gi|342858888|ref|ZP_08715542.1| hypothetical protein MCOL_08428 ... 382 4e-104 gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yr... 380 2e-103 gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [M... 379 2e-103 gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yr... 379 4e-103 gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cass... 379 4e-103 gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycoba... 379 4e-103 gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycob... 378 5e-103 gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycob... 378 5e-103 gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Myc... 374 7e-102 gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_202... 374 1e-101 gi|336460597|gb|EGO39490.1| ABC-type transport system involved i... 372 3e-101 gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycob... 372 3e-101 gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane p... 340 1e-91 gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770... 338 4e-91 gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcu... 334 1e-89 gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cass... 325 4e-87 gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcu... 313 1e-83 gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 ... 301 5e-80 gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346... 301 1e-79 gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [My... 300 1e-79 gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 ... 300 2e-79 gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [M... 300 2e-79 gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [My... 300 2e-79 gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcu... 299 3e-79 gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 ... 298 6e-79 gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [My... 298 7e-79 gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [My... 298 8e-79 gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 ... 297 1e-78 gi|315443551|ref|YP_004076430.1| ABC transporter involved in res... 296 2e-78 >gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97] gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str. Pasteur 1173P2] 63 more sequence titles Length=289 Score = 569 bits (1466), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL Sbjct 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL Sbjct 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV Sbjct 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis H37Ra] gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210] gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN 4207] gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN R506] gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN V2475] gi|339293233|gb|AEJ45344.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis CCDC5079] gi|339296879|gb|AEJ48989.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis CCDC5180] Length=298 Score = 568 bits (1465), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL Sbjct 10 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 69 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 70 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 129 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL Sbjct 130 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 189 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY Sbjct 190 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 249 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV Sbjct 250 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 298 >gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB] Length=300 Score = 568 bits (1464), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL Sbjct 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL Sbjct 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV Sbjct 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] gi|339630249|ref|YP_004721891.1| hypothetical protein MAF_01690 [Mycobacterium africanum GM041182] gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] gi|339329605|emb|CCC25241.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium africanum GM041182] Length=289 Score = 567 bits (1462), Expect = 6e-160, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL Sbjct 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL Sbjct 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRP+DVFWSFLEALIITAIVMVSHCY Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV Sbjct 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|340625205|ref|YP_004743657.1| hypothetical protein MCAN_01741 [Mycobacterium canettii CIPT 140010059] gi|340003395|emb|CCC42515.1| conserved hypothetical integral membrane protein YRBE1B [Mycobacterium canettii CIPT 140010059] Length=289 Score = 566 bits (1460), Expect = 1e-159, Method: Compositional matrix adjust. Identities = 287/289 (99%), Positives = 287/289 (99%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MST AVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQI HALRYYRKETLRL Sbjct 1 MSTTAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQITHALRYYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL Sbjct 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV Sbjct 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] Length=289 Score = 566 bits (1458), Expect = 2e-159, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRAVANLRQYG AAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL Sbjct 1 MSTAAVLRARFPRAVANLRQYGVAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL Sbjct 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV Sbjct 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M] gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium marinum M] Length=289 Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 255/289 (89%), Positives = 271/289 (94%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRA+AN +Y G+ RGLDE+G+L WF LTS+GQ HALRYYRKE LRL Sbjct 1 MSTAAVLRARFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYRKEILRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGT AIVGFVTLSGSSL+AIQGFASLGNIGVEAFTGFF+AL+NVRI Sbjct 61 IAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSIS+LASTRIMAGLVVIIPL Sbjct 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSF SPQ+ TTVLYGQS+GTYEHYF+TFLRPDDVFWSFLEA+II AIVMV+HCY Sbjct 181 YALAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY AGGGPVGVGEAVGRSMRFSLVSV VVVL AALALYGV+PNF LTV Sbjct 241 YGYNAGGGPVGVGEAVGRSMRFSLVSVNVVVLCAALALYGVNPNFALTV 289 >gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] Length=289 Score = 469 bits (1206), Expect = 3e-130, Method: Compositional matrix adjust. Identities = 253/289 (88%), Positives = 270/289 (94%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRA+AN +Y G+ RGLDE+G+L WF LTS+GQ HALRYYRKE LRL Sbjct 1 MSTAAVLRARFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYRKEILRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGT AIVGFVTLSGSSL+AIQGFASLGNIGVEAFTGFF+AL+NVRI Sbjct 61 IAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGI+SIS+LASTRIMAGLVVIIPL Sbjct 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSF SPQ+ TTVLYGQS+GTYEHYF+TFLRPDDVFWSFLEA+II AIVMV+HCY Sbjct 181 YALAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY AGGGPVG GEAVGRSMRFSLVSV VVVL AALALYGV+PNF LTV Sbjct 241 YGYNAGGGPVGEGEAVGRSMRFSLVSVNVVVLCAALALYGVNPNFALTV 289 >gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=289 Score = 467 bits (1201), Expect = 1e-129, Method: Compositional matrix adjust. Identities = 257/289 (89%), Positives = 273/289 (95%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRA NL +YGGAA RGLD+ GQ+ WF ++G I HALR YRKETLRL Sbjct 1 MSTAAVLRARFPRAAENLNRYGGAAGRGLDDVGQMAWFGAVALGHIPHALRNYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAV+GGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PVVTG+A+AATVGAGATAELGAMRISEEIDALEVMGIKSISFLA+TRIMAGLVVIIPL Sbjct 121 AAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYF+TFLRPDDVFWSFLEA+IITA+VM++HC+ Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCF 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY AGGGPVGVGEAVGRSMRFSLVSVQVVVL AALALYGV+PNF LTV Sbjct 241 YGYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYGVNPNFALTV 289 >gi|342859378|ref|ZP_08716032.1| hypothetical protein MCOL_10878 [Mycobacterium colombiense CECT 3035] gi|342133619|gb|EGT86822.1| hypothetical protein MCOL_10878 [Mycobacterium colombiense CECT 3035] Length=289 Score = 464 bits (1194), Expect = 8e-129, Method: Compositional matrix adjust. Identities = 248/289 (86%), Positives = 272/289 (95%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MST+AV RARFPRA NL +YG AA+RGLD+ GQ+ WF ++G I HALR YRKETLRL Sbjct 1 MSTSAVFRARFPRAAENLNRYGLAASRGLDDIGQMAWFGALAVGHIPHALRNYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAV+GGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PVVTG+A+AATVGAGATAELGAMRISEE+DALEVMGIKSISFLASTRIMAGLVVIIP+ Sbjct 121 AAPVVTGIAMAATVGAGATAELGAMRISEEVDALEVMGIKSISFLASTRIMAGLVVIIPI 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Y++A+IM+FLSPQITTTV+YGQSNGTYEHYF+TFLRPDDVFWSFLEA+IITA+VM++HC+ Sbjct 181 YSMAIIMTFLSPQITTTVIYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCF 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY AGGGPVGVGEAVGRSMRFSLVSVQVVVL AALALYGV+PNF LTV Sbjct 241 YGYEAGGGPVGVGEAVGRSMRFSLVSVQVVVLSAALALYGVNPNFALTV 289 >gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104] gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336459861|gb|EGO38773.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium avium subsp. paratuberculosis S397] Length=289 Score = 458 bits (1178), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 253/289 (88%), Positives = 271/289 (94%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAV R+RFPRA NL +YG AAARGLD+ GQ+ WF ++ I HAL +YRKETLRL Sbjct 1 MSTAAVFRSRFPRAAENLNRYGLAAARGLDDVGQMAWFGGVALAHIPHALSHYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAV+GGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PVVTG+A+AATVGAGATAELGAMRISEEIDALEVMGIKSISFLA+TRIMAGLVVIIPL Sbjct 121 AAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYF+TFLRPDDVFWSFLEA+IITA+VM++HC+ Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCF 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY AGGGPVGVGEAVGRSMRFSLVSVQVVVL AALALYGV+PNF LTV Sbjct 241 YGYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYGVNPNFALTV 289 >gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN] gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923] gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae] gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=289 Score = 456 bits (1173), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 246/289 (86%), Positives = 267/289 (93%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAAVLRARFPRA ANL +YGGAAARG+D+ GQ++WF L ++G I +AL YRKETLRL Sbjct 1 MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNALSRYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IAQIGMGTGAMAVVGGT AIVGFVTLSGSSLVAIQGFASLG IGVEAFTGFFAALINVRI Sbjct 61 IAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PV+TG+ +AATVGAGATAELGAMRISEEIDALEVM IKSISFL +TRI+AGLVVI+PL Sbjct 121 AAPVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YA+AMIM+FLSP I TTVLYGQSNGTYEHYF+TFLRPDDVFWSFLEA+IITA+VM++HCY Sbjct 181 YAVAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY A GGPVGVGEAVGRSMRFSLVSVQVVVL A LALYGVDPNF LTV Sbjct 241 YGYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV 289 >gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC 13950] Length=289 Score = 454 bits (1168), Expect = 7e-126, Method: Compositional matrix adjust. Identities = 250/289 (87%), Positives = 269/289 (94%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MST V R+RFPRA NL +YG AAARGLD+ GQ+ WF ++ I HALR YRKETLRL Sbjct 1 MSTTTVFRSRFPRAAENLNRYGLAAARGLDDIGQMAWFGGVALAHIPHALRNYRKETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +AQIGMGTGAMAV+GGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 VAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PVVTG+A+AATVGAGATAELGAMRISEEIDALEVMGIKSISFLA+TRIMAGLVVIIPL Sbjct 121 AAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALAMIMSFLSPQITTTVLYGQSNGTYEHYF+TFLRPDDVFWSFLEA++ITA+VM++HC+ Sbjct 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAILITAVVMITHCF 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY AGGGPVGVGEAVGRSMRFSLVSVQVVVL AALALYGV+PNF LTV Sbjct 241 YGYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYGVNPNFALTV 289 >gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC 12478] Length=272 Score = 452 bits (1162), Expect = 3e-125, Method: Compositional matrix adjust. Identities = 236/272 (87%), Positives = 252/272 (93%), Gaps = 0/272 (0%) Query 18 LRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGT 77 + +YGGAA RGLD G+L WF L S+G + AL YRKETLRLIAQIGMGTGAMAVVGGT Sbjct 1 MNRYGGAAVRGLDTTGRLAWFTLVSLGNVPFALSRYRKETLRLIAQIGMGTGAMAVVGGT 60 Query 78 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137 AIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA PVVTGVA+AATVGAG Sbjct 61 AAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAATVGAG 120 Query 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTT 197 ATAELGAMRISEEIDALEVMGIKS+ FLA+TRI+AGL VIIPLYA+AMIM+FLSPQITTT Sbjct 121 ATAELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPLYAMAMIMAFLSPQITTT 180 Query 198 VLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVG 257 VLYGQS GTYEHYF+TFLRPDDVFWSFLEA+IITA+VMVSHCYYGY+AGGGPVGVGEAVG Sbjct 181 VLYGQSTGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMVSHCYYGYSAGGGPVGVGEAVG 240 Query 258 RSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 RSMRFSLVS+ VVVL AALALYGVDPNF LTV Sbjct 241 RSMRFSLVSIPVVVLSAALALYGVDPNFALTV 272 >gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK] gi|315441805|ref|YP_004074684.1| ABC transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length=290 Score = 445 bits (1145), Expect = 3e-123, Method: Compositional matrix adjust. Identities = 232/288 (81%), Positives = 256/288 (89%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 TAAVLR+RFPR VA + GA RGLD G + WF +T++G I HA+RYYRKE LRLI Sbjct 3 DTAAVLRSRFPRGVARAEKIVGAPGRGLDSIGHVAWFVVTAVGSIGHAVRYYRKEMLRLI 62 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA Sbjct 63 AEIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 122 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 PVV G ALAATVGAGATAELGAMRISEEIDALEVMGIKSIS+L STRI+AG VVIIPLY Sbjct 123 APVVAGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLY 182 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 A+A+IMSFLS Q TTT+ YGQS GTYEHYF+TFLRPDDVFWSF++A+II+ IVM++HCYY Sbjct 183 AMAIIMSFLSAQATTTIFYGQSTGTYEHYFRTFLRPDDVFWSFVQAVIISVIVMLNHCYY 242 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 G+ A GGPVGVGEAVGRSMR SLV++ VVLFA+LALYGVDPNFNLTV Sbjct 243 GFYASGGPVGVGEAVGRSMRASLVAIVCVVLFASLALYGVDPNFNLTV 290 >gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1] gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=289 Score = 429 bits (1103), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 233/289 (81%), Positives = 260/289 (90%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MST+AVLR+RFPR VA ++ GA ARGL+ G + F +T++G I HALR+YR+E LRL Sbjct 1 MSTSAVLRSRFPRGVATAEKWAGAPARGLEAMGHVAVFVVTAVGSIGHALRFYRREMLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IA+IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI Sbjct 61 IAEIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PVV G ALAATVGAGATAELGAMRISEEIDALEVMGIKSIS+L STRIMAG VVIIPL Sbjct 121 AAPVVAGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YA+A+IMSFLS Q+TTTV YGQS GTYEHYF+TFLRPDDVFWSF++A+II+ IVM++HCY Sbjct 181 YAMAIIMSFLSAQVTTTVFYGQSVGTYEHYFRTFLRPDDVFWSFIQAVIISVIVMLNHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YG+ A GGPVGVGEAVGRSMR SLV++ VVVL A+LALYGVDPNFNLTV Sbjct 241 YGFYASGGPVGVGEAVGRSMRASLVAIVVVVLLASLALYGVDPNFNLTV 289 >gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS] gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=297 Score = 419 bits (1077), Expect = 3e-115, Method: Compositional matrix adjust. Identities = 222/288 (78%), Positives = 251/288 (88%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 T VLR RFPR A + A +RGLD G + WF +T++G I HALRYYRKE LRLI Sbjct 10 KTGTVLRQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLI 69 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAV+GGTVAIVGFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL+NVRIA Sbjct 70 AEIGMGTGAMAVIGGTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIA 129 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 PVV+G ALAATVGAGATAELGAMRISEEIDALEVMGIKSIS+L STRIMAG +VIIPLY Sbjct 130 APVVSGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLY 189 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 A+A+IMSFLS Q+TTT+ YGQS GTYEHYF+TFLRPDDV WSF++A+II+ IVM++HCYY Sbjct 190 AMAIIMSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMLNHCYY 249 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVGEAVGRSMR SL+++ +VVL A+LALYG DPNFNLTV Sbjct 250 GYYASGGPVGVGEAVGRSMRASLIAIVLVVLLASLALYGTDPNFNLTV 297 >gi|333988761|ref|YP_004521375.1| hypothetical protein JDM601_0121 [Mycobacterium sp. JDM601] gi|333484729|gb|AEF34121.1| integral membrane protein YrbE1B [Mycobacterium sp. JDM601] Length=284 Score = 410 bits (1055), Expect = 9e-113, Method: Compositional matrix adjust. Identities = 209/284 (74%), Positives = 247/284 (87%), Gaps = 0/284 (0%) Query 6 VLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIG 65 ++RARFP +AN +Y GAA R LD++GQ+ WF LT+I QI ALR YR+E+LRLIA++G Sbjct 1 MVRARFPGLIANYHRYVGAAGRSLDKSGQMGWFFLTAIRQIPWALRRYRRESLRLIAELG 60 Query 66 MGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVV 125 MGTGAMAV+GGTVAI+GFV L+G SL+AIQGF SLGNIGVE +TGF AAL+NVR+ GPV Sbjct 61 MGTGAMAVIGGTVAIIGFVMLAGGSLIAIQGFTSLGNIGVETYTGFAAALVNVRVVGPVN 120 Query 126 TGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAM 185 G+ALAATVGAGATAELGAMRISEEIDALEVMGI SIS+L STR++AG VIIPLYALA+ Sbjct 121 AGIALAATVGAGATAELGAMRISEEIDALEVMGINSISYLVSTRVVAGFTVIIPLYALAL 180 Query 186 IMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAA 245 IM+F SPQI TT+ +GQS+GTY+HYF+TFLR DDVFWSF+E ++I IVM++HCYYG+ A Sbjct 181 IMAFASPQIVTTLFFGQSSGTYDHYFRTFLRADDVFWSFMETILIAVIVMITHCYYGFNA 240 Query 246 GGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GGPVGVGEAVGRSMR SL+SV VVLFAALALYGVDPNFNLT+ Sbjct 241 SGGPVGVGEAVGRSMRLSLISVPTVVLFAALALYGVDPNFNLTM 284 >gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS] gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS] gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length=296 Score = 407 bits (1047), Expect = 7e-112, Method: Compositional matrix adjust. Identities = 223/288 (78%), Positives = 252/288 (88%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 ST VLR RFPR A + A +RGLD G + WF +T++G I HALRYYRKE LRLI Sbjct 9 STGTVLRQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLI 68 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAV+GGTVAIVGFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL+NVRIA Sbjct 69 AEIGMGTGAMAVIGGTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIA 128 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 PVV+G ALAATVGAGATAELGAMRISEEIDALEVMGIKSIS+L STRIMAG +VIIPLY Sbjct 129 APVVSGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLY 188 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 A+A+IMSFLS Q+TTT+ YGQS GTYEHYF+TFLRPDDV WSF++A+II+ IVM++HCYY Sbjct 189 AMAIIMSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMINHCYY 248 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVGEAVGRSMR SL+++ +VVL A+LALYG DPNFNLTV Sbjct 249 GYYASGGPVGVGEAVGRSMRASLIAIVLVVLLASLALYGTDPNFNLTV 296 >gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp. paratuberculosis K-10] Length=251 Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 226/248 (92%), Positives = 240/248 (97%), Gaps = 0/248 (0%) Query 42 SIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLG 101 ++ I HAL +YRKETLRLIAQIGMGTGAMAV+GGTVAIVGFVTLSGSSLVAIQGFASLG Sbjct 4 ALAHIPHALSHYRKETLRLIAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLG 63 Query 102 NIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKS 161 NIGVEAFTGFFAALINVRIA PVVTG+A+AATVGAGATAELGAMRISEEIDALEVMGIKS Sbjct 64 NIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKS 123 Query 162 ISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVF 221 ISFLA+TRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYF+TFLRPDDVF Sbjct 124 ISFLATTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVF 183 Query 222 WSFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGV 281 WSFLEA+IITA+VM++HC+YGY AGGGPVGVGEAVGRSMRFSLVSVQVVVL AALALYGV Sbjct 184 WSFLEAIIITAVVMITHCFYGYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYGV 243 Query 282 DPNFNLTV 289 +PNF LTV Sbjct 244 NPNFALTV 251 >gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length=289 Score = 389 bits (998), Expect = 4e-106, Method: Compositional matrix adjust. Identities = 204/289 (71%), Positives = 242/289 (84%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MST VLR+RFPRA + + AR LD G + WF + +I + HA R+YR+E+LRL Sbjct 1 MSTVQVLRSRFPRAFSRSSEIAATPARFLDSMGHVAWFVVQAIVHVPHAFRHYRRESLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +A+IGMGTGAMAV+GGTVAI+GFVTLS SL+AIQGFASLGNIGVEAFTGFFAAL N+R+ Sbjct 61 VAEIGMGTGAMAVIGGTVAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRV 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 PVVTG ALAATVGAGATAELGAMRISEE+DALEVMGIKSIS+L STRIMAG +VIIPL Sbjct 121 VAPVVTGQALAATVGAGATAELGAMRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YA+A+++SF+S Q+ TT+ Y QS GTYEHYF TFLR DDV WSFLE +I++ IVM++HCY Sbjct 181 YAMAILLSFMSAQLVTTIFYSQSVGTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 +GY A GG VGVGEAVGRSMR SL+++ +VVL A+LALYG DPNFNLTV Sbjct 241 FGYFASGGAVGVGEAVGRSMRTSLIAIVLVVLLASLALYGTDPNFNLTV 289 >gi|342858888|ref|ZP_08715542.1| hypothetical protein MCOL_08428 [Mycobacterium colombiense CECT 3035] gi|342133129|gb|EGT86332.1| hypothetical protein MCOL_08428 [Mycobacterium colombiense CECT 3035] Length=289 Score = 382 bits (981), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 224/289 (78%), Positives = 248/289 (86%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 M+TAAVLRAR+PR ANL +YGG AR L G FA S+GQI ALR+YR+ETLRL Sbjct 1 MATAAVLRARYPRTAANLNRYGGGTARRLWRIGIFARFARISVGQIGWALRHYRRETLRL 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N RI Sbjct 61 VAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRI 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A P+V GV LAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GL VI+PL Sbjct 121 AAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLGVIVPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS LE +II +VM++HCY Sbjct 181 YALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVLEVVIIAVVVMITHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 241 YGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 289 >gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] Length=294 Score = 380 bits (975), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 220/288 (77%), Positives = 247/288 (86%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 7 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 66 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 67 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 126 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 127 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 186 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 187 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 246 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 247 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 294 >gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv] gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97] gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str. Pasteur 1173P2] 52 more sequence titles Length=295 Score = 379 bits (974), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 220/288 (77%), Positives = 247/288 (86%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] Length=295 Score = 379 bits (972), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 219/288 (77%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 S AVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 8 SATAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRVSVVQIGWALRRYRRETLRLV 67 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=289 Score = 379 bits (972), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 203/289 (71%), Positives = 237/289 (83%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MSTAA LR RFPR A + +YG +R L E GQ+ WFAL++IGQI A+ YRKE LR+ Sbjct 1 MSTAAALRVRFPRTSALVIRYGDVPSRPLVEIGQMVWFALSAIGQIPFAVHRYRKELLRM 60 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +AQ+GMGTGAMAVVGGT AIVGF+TLS SLVAIQG+A+LGNIGVEAFTGF AAL+NVR Sbjct 61 VAQMGMGTGAMAVVGGTAAIVGFITLSAGSLVAIQGYATLGNIGVEAFTGFLAALVNVRF 120 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 PV G ALAATVGAGATAELGAMRISEEIDALEVM I+S+ FLASTR++AGL+VIIPL Sbjct 121 VAPVAAGQALAATVGAGATAELGAMRISEEIDALEVMSIRSVPFLASTRVVAGLIVIIPL 180 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Y LAM M+FLS Q+TT +LYGQS GTY HYF TFLR +DV WSF E +++ +VM +HCY Sbjct 181 YGLAMTMAFLSQQVTTVLLYGQSIGTYNHYFHTFLRLNDVGWSFAEVILVAVVVMTTHCY 240 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY A GGPVGVGEAVGRSMR SL+++ VVV+ A+A+YG PNFNLTV Sbjct 241 YGYTATGGPVGVGEAVGRSMRLSLITIVVVVVLTAMAVYGKTPNFNLTV 289 >gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551] gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis CDC1551A] Length=295 Score = 379 bits (972), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 220/288 (77%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM+ HCYY Sbjct 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMIIHCYY 247 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis W-148] Length=295 Score = 378 bits (971), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 219/288 (77%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVE FTGFFAAL N R+A Sbjct 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVA 127 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length=295 Score = 378 bits (971), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 219/288 (77%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 S AVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 8 SATAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 Query 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 Query 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 Query 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 Query 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104] gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104] Length=292 Score = 374 bits (961), Expect = 7e-102, Method: Compositional matrix adjust. Identities = 219/289 (76%), Positives = 242/289 (84%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 +S LRAR+PR ANL +YGG R L + G FA SIGQI ALR+YR+ETLRL Sbjct 4 ISAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQIGWALRHYRRETLRL 63 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N RI Sbjct 64 VAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRI 123 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A P+V GV LAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GL VI+PL Sbjct 124 AAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPL 183 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS E +II +VM++HCY Sbjct 184 YALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCY 243 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY A GGPVGVG AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 244 YGYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp. avium ATCC 25291] Length=292 Score = 374 bits (959), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 218/289 (76%), Positives = 242/289 (84%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 +S LRAR+PR ANL +YGG R L + G FA SIGQI ALR+YR+ETLRL Sbjct 4 ISAPGALRARYPRTAANLDRYGGGTVRRLWQIGVFARFARVSIGQIGWALRHYRRETLRL 63 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N RI Sbjct 64 VAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRI 123 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A P+V GV LAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GL VI+PL Sbjct 124 AAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPL 183 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV W+ E +II +VM++HCY Sbjct 184 YALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWAVFEVVIIAVVVMITHCY 243 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY A GGPVGVG AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 244 YGYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|336460597|gb|EGO39490.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium avium subsp. paratuberculosis S397] Length=292 Score = 372 bits (956), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 218/289 (76%), Positives = 241/289 (84%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 +S LRAR+PR ANL +YGG R L + G FA SIGQ ALR+YR+ETLRL Sbjct 4 ISVPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRHYRRETLRL 63 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N RI Sbjct 64 VAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRI 123 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A P+V GV LAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GL VI+PL Sbjct 124 AAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPL 183 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS E +II +VM++HCY Sbjct 184 YALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCY 243 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY A GGPVGVG AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 244 YGYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp. paratuberculosis K-10] Length=292 Score = 372 bits (955), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 218/289 (76%), Positives = 241/289 (84%), Gaps = 0/289 (0%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 +S LRAR+PR ANL +YGG R L + G FA SIGQ ALR+YR+ETLRL Sbjct 4 ISAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRHYRRETLRL 63 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 +A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N RI Sbjct 64 VAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRI 123 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A P+V GV LAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GL VI+PL Sbjct 124 AAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPL 183 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 YALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS E +II +VM++HCY Sbjct 184 YALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCY 243 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 YGY A GGPVGVG AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 244 YGYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis H37Ra] gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN 4207] gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN R506] gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN V2475] Length=246 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 199/245 (82%), Positives = 221/245 (91%), Gaps = 0/245 (0%) Query 45 QIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIG 104 QI ALR YR+ETLRL+A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIG Sbjct 2 QIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIG 61 Query 105 VEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISF 164 VEAFTGFFAAL N R+A P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISF Sbjct 62 VEAFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISF 121 Query 165 LASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSF 224 L STRI+ GLVVI+PLYALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS Sbjct 122 LVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSV 181 Query 225 LEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPN 284 +E +II +VM++HCYYGY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPN Sbjct 182 VEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPN 241 Query 285 FNLTV 289 FNLTV Sbjct 242 FNLTV 246 >gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210] gi|339293631|gb|AEJ45742.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079] gi|339297272|gb|AEJ49382.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180] Length=246 Score = 338 bits (868), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 198/245 (81%), Positives = 220/245 (90%), Gaps = 0/245 (0%) Query 45 QIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIG 104 QI ALR YR+ETLRL+A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIG Sbjct 2 QIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIG 61 Query 105 VEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISF 164 VE FTGFFAAL N R+A P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISF Sbjct 62 VETFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISF 121 Query 165 LASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSF 224 L STRI+ GLVVI+PLYALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS Sbjct 122 LVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSV 181 Query 225 LEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPN 284 +E +II +VM++HCYYGY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPN Sbjct 182 VEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPN 241 Query 285 FNLTV 289 FNLTV Sbjct 242 FNLTV 246 >gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4] gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4] Length=286 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 174/279 (63%), Positives = 222/279 (80%), Gaps = 4/279 (1%) Query 9 ARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGT 68 +R P+ L G R L G F +I HA+ Y+KET+RLIA+IGMG+ Sbjct 10 SRHPK----LADAAGVPVRILKAIGHQADFFGKTIRLAPHAISSYKKETVRLIAEIGMGS 65 Query 69 GAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGV 128 GAMA++GGTV IVGF+TLSG +L+AIQGF+SLGNIGVEA TGFFAA INVRI PV++G+ Sbjct 66 GAMAIIGGTVVIVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGI 125 Query 129 ALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMS 188 ALAAT+GAGATA+LGAMRISEEIDALEVMGI+S+S+L STR++AG++ I+PLY++A+IMS Sbjct 126 ALAATIGAGATAQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMS 185 Query 189 FLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGG 248 F++ Q TTT +YGQS+G Y+HYF TFLRP D+FWSFL+A+++ +VM+ HCYYGY A GG Sbjct 186 FVASQFTTTYVYGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGG 245 Query 249 PVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNL 287 P GVGEAVGR++R SL++V V L A+LA+YG NFNL Sbjct 246 PAGVGEAVGRAVRTSLIAVVSVTLIASLAIYGASGNFNL 284 >gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=283 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 184/283 (66%), Positives = 227/283 (81%), Gaps = 0/283 (0%) Query 7 LRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGM 66 +++RFPRA + GA R LD +G + F + + L+ YRKE LRLIA+IGM Sbjct 1 MQSRFPRAWKLGAGWVGAPGRALDASGDVALFVGEVLRYLGFTLKNYRKEVLRLIAEIGM 60 Query 67 GTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126 GTGAMA VGGTVAI+GFVTLS SL+AIQGFASLGNIGVEAFTGFFAAL NVR+ P+VT Sbjct 61 GTGAMAAVGGTVAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVT 120 Query 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186 G ALAATVGAGATA+LGAMRISEEIDALEVMGIKS+S+L STR++ +V IPLY++A++ Sbjct 121 GTALAATVGAGATAQLGAMRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVL 180 Query 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAG 246 +SF S Q+ TT+ Y QS GTY+HYF TFLR +D ++S E + I+A+VM++HCYYGY A Sbjct 181 LSFFSAQLVTTLFYAQSIGTYDHYFNTFLRVNDFWYSLAETVAISAVVMLNHCYYGYNAS 240 Query 247 GGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 GGPVGVG AVGRSMR SL+++ +VVL A+LA+YGV+PNFNLTV Sbjct 241 GGPVGVGVAVGRSMRASLIAIVMVVLMASLAIYGVNPNFNLTV 283 >gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length=290 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 153/263 (59%), Positives = 202/263 (77%), Gaps = 0/263 (0%) Query 26 ARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVT 85 +R +D+ G+ F +I I A+R + KE LRL+A+I MGTGA+AV+GGTVA+VGF+T Sbjct 27 SRSIDDVGRQAVFFARAIAHIPWAIRKHPKEVLRLVAEISMGTGALAVIGGTVAVVGFLT 86 Query 86 LSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAM 145 L+ +AIQGF+SLGNIGVEA TGFF+A INVRIA PV+ G+ L+AT+GAG+TA++GAM Sbjct 87 LASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSATIGAGSTAQIGAM 146 Query 146 RISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNG 205 RISEEIDALE M I S+ ++ STR+ AG++ I+PLY+LA++ SFL+ + TT VL+GQS+G Sbjct 147 RISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSLALVGSFLAGRFTTVVLFGQSSG 206 Query 206 TYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLV 265 Y+HYF TFL P DV WSF++ L++ +VM+ H YYGY A GGP GVG AVGR +R SL+ Sbjct 207 LYDHYFTTFLDPVDVAWSFVQVLVMALLVMLIHTYYGYNASGGPSGVGTAVGRGVRLSLI 266 Query 266 SVQVVVLFAALALYGVDPNFNLT 288 V V L +LALYG NFNL+ Sbjct 267 CVVAVTLLVSLALYGGSGNFNLS 289 >gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS] gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=285 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 149/279 (54%), Positives = 205/279 (74%), Gaps = 4/279 (1%) Query 10 RFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTG 69 RFP L + G G F ++G + AL YYR ETLR+IAQ+G+G G Sbjct 9 RFPGLTHRLDGW----VAGWRRIGAQARFYAKTLGAMWEALVYYRGETLRMIAQMGLGAG 64 Query 70 AMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVA 129 A+A++GGTV IVGF+TL+ SLV IQG++SL +IGVEA TGF +A +N RI P+ ++ Sbjct 65 ALAMIGGTVGIVGFLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLTAVIS 124 Query 130 LAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSF 189 L+AT+GAG TA+LGAMRI+EEIDALEVMGI+S+++LASTR++AG++V+IPLY +A+ MSF Sbjct 125 LSATIGAGTTAQLGAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAVWMSF 184 Query 190 LSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGP 249 +S + TTV YGQ+ G Y+HYF TFL+P D+ WS +A+++ +VM+ H YYG+ A GGP Sbjct 185 MSARFATTVYYGQATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTASGGP 244 Query 250 VGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 GVGEAVGR++R SL++ V+LFA+LA+YG NF + Sbjct 245 AGVGEAVGRAVRTSLIAAVFVILFASLAIYGQSGNFQFS 283 >gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC 13950] Length=286 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 152/288 (53%), Positives = 206/288 (72%), Gaps = 4/288 (1%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 MS+ + FPR L + G G F ++G I AL Y+ ETLR+ Sbjct 1 MSSRTIASQLFPRLSYTLDGW----VAGWRRIGAQARFYARTLGAIRDALSSYKHETLRM 56 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IA++G+G GA+AV+GGTV IVGF+TLSG SLV IQG++SL IGVEA TGF +A +N RI Sbjct 57 IAEMGLGAGALAVIGGTVGIVGFLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRI 116 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 P+ + L+AT+GAG TA+LGAMRI+EEIDALEVMGI+SI++L STR++AG+VV+IPL Sbjct 117 VTPLTAVIGLSATIGAGTTAQLGAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPL 176 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Y + + MSF + + TT +YGQ G Y+HYF TFL+P D+ WS L+A+++ +VM+ H Y Sbjct 177 YCIGLWMSFYAARFATTSVYGQPTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTY 236 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 YGY A GGP GVGEAVGR++R S+VS +V+LF++LA+YG NF+ + Sbjct 237 YGYTASGGPAGVGEAVGRAVRSSMVSAVLVILFSSLAIYGKTGNFHFS 284 >gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS] gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS] gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length=285 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 152/291 (53%), Positives = 208/291 (72%), Gaps = 10/291 (3%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQL---TWFALTSIGQIAHALRYYRKET 57 M T VLR+ +PR +R R +D G+L F + +IG + HA ++RKE Sbjct 1 MGTLTVLRSNYPRLARGVR-------RPVDVLGRLGDHMLFYIRAIGGVPHATLHFRKEI 53 Query 58 LRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALIN 117 +RLIA+I MG G +A++GGT+ IVGF+TL+ +A+QGF+SLG+IG+EA TGF AA IN Sbjct 54 IRLIAEISMGAGTLAMIGGTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFIN 113 Query 118 VRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVI 177 VRIA P V G+ LAAT GAG TA+LGAMRI+EEIDALE M I+ + +L STRI AG++ I Sbjct 114 VRIAAPTVAGIGLAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAI 173 Query 178 IPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVS 237 PLYA+A+I+SF++ Q TT +L+GQS G Y+HYF TFL P D+ WSFL+A+++ +++ Sbjct 174 TPLYAIAVILSFVASQFTTVMLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLV 233 Query 238 HCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 H Y+GY A GGP GVG AVG ++R SL+ V V L +L++YG + NFNL+ Sbjct 234 HTYFGYFASGGPSGVGVAVGNAVRTSLILVVSVTLLVSLSVYGRNGNFNLS 284 >gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS] gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=285 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/291 (53%), Positives = 207/291 (72%), Gaps = 10/291 (3%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQL---TWFALTSIGQIAHALRYYRKET 57 M T VLR+ +PR +R R +D G+L F + +IG + HA ++RKE Sbjct 1 MGTLTVLRSNYPRLARGVR-------RPVDVLGRLGDHMLFYIRAIGGVPHATVHFRKEI 53 Query 58 LRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALIN 117 +RLIA+I MG G +A++GGT+ IVGF+TL+ +A+QGF+SLG+IG+EA TGF AA IN Sbjct 54 IRLIAEISMGAGTLAMIGGTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFIN 113 Query 118 VRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVI 177 VRIA P V G+ LAAT GAG TA+LGAMRI+EEIDALE M I+ + +L STRI AG++ I Sbjct 114 VRIAAPTVAGIGLAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAI 173 Query 178 IPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVS 237 PLYA+A+I+SFL+ Q T +L+GQS G Y+HYF TFL P D+ WSFL+A+++ +++ Sbjct 174 TPLYAIAVILSFLASQFVTVMLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLV 233 Query 238 HCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 H Y+GY A GGP GVG AVG ++R SL+ V V L +L++YG + NFNL+ Sbjct 234 HTYFGYFASGGPSGVGVAVGNAVRTSLILVVSVTLLVSLSVYGRNGNFNLS 284 >gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str. MC2 155] gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=272 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 148/258 (58%), Positives = 198/258 (77%), Gaps = 0/258 (0%) Query 30 DEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGS 89 D G T F +IG I A YR E +RLIA +G+G GA+AVVGGTVAIVGF+T++ Sbjct 13 DGIGVQTQFYARAIGSIGDAAMNYRTELIRLIATMGLGAGALAVVGGTVAIVGFLTMTTG 72 Query 90 SLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISE 149 +LVA+QG+ ++GVEA TGF +A NVR+ P T VAL+AT+GAGATA+LGAMRI+E Sbjct 73 ALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAGATAQLGAMRINE 132 Query 150 EIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEH 209 EIDALEV+GI+S+S+LASTR+ AG++V+IPLY +A+IMSF+S ++ TTV+YGQ +G Y+H Sbjct 133 EIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTTVIYGQGSGVYDH 192 Query 210 YFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQV 269 YF TFL +D+ WSF +++ IT ++M+ H YYGY A GGP GVGEAVGR++R SL+ + Sbjct 193 YFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPAGVGEAVGRAVRTSLIVAAI 252 Query 270 VVLFAALALYGVDPNFNL 287 VV+ +LALYG NF+L Sbjct 253 VVVMISLALYGQSGNFHL 270 >gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS] gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS] gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS] gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=285 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 151/288 (53%), Positives = 203/288 (71%), Gaps = 4/288 (1%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 M T L +PR V+ R+ R G F ++ HA +YRKE +RL Sbjct 1 MGTLTTLGTAYPRVVSQFRKPASLVGR----LGDHILFYGRALAGTPHAAMHYRKEIVRL 56 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IA+I MG G +A++GGTV IVGF+TL+ +A+QG++SLG+IG+EA TGF AA INVRI Sbjct 57 IAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRI 116 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 + PVV G+ LAAT GAG TA+LGAMRI+EE+DALE MGI+ I +L STRI+AG++ I PL Sbjct 117 SAPVVAGIGLAATFGAGVTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPL 176 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Y++A+I+SFL+ Q+TT VL+GQS G Y+HYF TFL P D+ WSFL+A+++ V+ H Y Sbjct 177 YSVAVILSFLASQLTTVVLFGQSGGLYDHYFNTFLNPVDLLWSFLQAILMALTVLFIHTY 236 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 +GY A GGP GVG AVG ++R SL+ V V L +L++YG + NFNL+ Sbjct 237 FGYFATGGPAGVGVAVGNAVRTSLIVVVAVTLLVSLSVYGSNGNFNLS 284 >gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4] gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4] Length=283 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 162/279 (59%), Positives = 209/279 (75%), Gaps = 4/279 (1%) Query 10 RFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTG 69 RFPR R+ +A+R +D G+ F +IG AL +YR+ETLRLIA+I MGTG Sbjct 8 RFPRT----RRRFASASRSIDRLGEQALFFARAIGSAPRALVHYRRETLRLIAEISMGTG 63 Query 70 AMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVA 129 A+AV+GGTV IVGF+TL +A+QG++SLGNIGVEA TGFFAA INVRIA PV+ G+ Sbjct 64 ALAVIGGTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIG 123 Query 130 LAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSF 189 LAAT+GAG+TA+LGAMR+SEEIDALE M I SI +L STR+MAG++ IIPLYALA+I SF Sbjct 124 LAATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASF 183 Query 190 LSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGP 249 ++ + T VLY QS+G Y+HYF TFL P D+ WSF +A+++ +M+ H YYG+ A GGP Sbjct 184 MASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGP 243 Query 250 VGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 VGVG AVG ++R SL++V V L +LA+YG NFNL+ Sbjct 244 VGVGVAVGNAVRSSLIAVVTVTLLISLAIYGGSGNFNLS 282 >gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1] gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=283 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 162/279 (59%), Positives = 208/279 (75%), Gaps = 4/279 (1%) Query 10 RFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTG 69 RFPR R+ +A+R +D G+ F +IG AL +Y KETLRLIA+I MGTG Sbjct 8 RFPRT----RKRFASASRSIDRLGEQALFFARAIGWAPRALMHYPKETLRLIAEISMGTG 63 Query 70 AMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVA 129 A+AV+GGTV IVGF+TL +A+QG++SLGNIGVEA TGFFAA INVRIA PV+ G+ Sbjct 64 ALAVIGGTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIG 123 Query 130 LAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSF 189 LAAT+GAG+TA+LGAMR+SEEIDALE M I SI +L STR+MAG++ IIPLYALA+I SF Sbjct 124 LAATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASF 183 Query 190 LSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGP 249 ++ + T VLY QS+G Y+HYF TFL P D+ WSF +A+++ +M+ H YYG+ A GGP Sbjct 184 MASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGP 243 Query 250 VGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 VGVG AVG ++R SL++V V L +LA+YG NFNL+ Sbjct 244 VGVGVAVGNAVRSSLIAVVTVTLLISLAIYGASGNFNLS 282 >gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1] gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=284 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 148/262 (57%), Positives = 202/262 (78%), Gaps = 0/262 (0%) Query 26 ARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVT 85 A G +E G F ++ + A+R Y E LRLIAQ+G+GTGA+AVVGGTVAIVGF+T Sbjct 21 AAGWNELGDQARFYAGTLRAVPDAVRRYPGELLRLIAQMGLGTGALAVVGGTVAIVGFLT 80 Query 86 LSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAM 145 ++ +LVA+QG+ ++GVEA TGF +A NVR+ P T VAL+AT+GAGATA+LGAM Sbjct 81 ITTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIVPGTTAVALSATIGAGATAQLGAM 140 Query 146 RISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNG 205 RI+EEIDALEV+GI+S+++LA+TR++AG+VV+IPLY +A++M+FL+ + TTV+YGQ +G Sbjct 141 RINEEIDALEVIGIRSVTYLAATRVLAGVVVVIPLYCIAVMMAFLAARTGTTVIYGQGSG 200 Query 206 TYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLV 265 Y+HYF TFL P D+ WSFL+++ IT +VM+ H YYGY A GGP GVGEAVGR++R S+V Sbjct 201 VYDHYFNTFLNPTDLVWSFLQSVAITVVVMLVHTYYGYTARGGPAGVGEAVGRAVRTSMV 260 Query 266 SVQVVVLFAALALYGVDPNFNL 287 V ++ +LA+YG NFNL Sbjct 261 VAAVEIVMISLAIYGQSGNFNL 282 >gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1] gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=285 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 159/288 (56%), Positives = 209/288 (73%), Gaps = 4/288 (1%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 M T+ +LR RFPR V +L G L G F +IG + HA ++RKE +RL Sbjct 1 MGTSTLLRQRFPRLVDHL----GRPVALLSRLGDHVLFYGRAIGGVPHAAVHFRKEIVRL 56 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IA+I MG G +A++GGTV IVGF+TL+ +AIQG++SLGNIG+EA TGF AA INVRI Sbjct 57 IAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRI 116 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PVV G+ LAAT GAG TA+LGAMRI+EEIDALE MGI+ + +L STRI+AG+V I PL Sbjct 117 AAPVVAGIGLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPL 176 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Y++A+I+SF++ Q TT VL+GQS G Y+HYF TFL P D+ WSFL+A+++ +++ H Y Sbjct 177 YSIAVILSFVASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTY 236 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 +GY A GGP GVG AVG ++R SLV V V L +L++YG + NFNL+ Sbjct 237 FGYFASGGPSGVGAAVGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLS 284 >gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK] gi|315445484|ref|YP_004078363.1| ABC transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length=282 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/282 (53%), Positives = 205/282 (73%), Gaps = 4/282 (1%) Query 7 LRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGM 66 +R P+ V L G L G+ T F ++ + HA+ +YR+E +RL+A+I M Sbjct 4 IRTLHPQLVRRL----GRPVDTLGGIGEHTAFYGRALAGVPHAVVHYRREIIRLVAEISM 59 Query 67 GTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126 G G +A++GGTV IVGF+TL+ +A+QG++SLG+IG+EA TGF AA INVRI+ PVV Sbjct 60 GAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVA 119 Query 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186 G+ LAAT GAG TA+LGAMRI+EEIDALE MGI+ + +L STRI+AG++ I PLY++A+I Sbjct 120 GIGLAATFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVI 179 Query 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAG 246 +SFL+ ++TT VL+GQS G Y HYF TFL P D+ WSFL+A+++ V++ H Y+GY AG Sbjct 180 LSFLASKLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAG 239 Query 247 GGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 GGP GVG AVG ++R SL+ V V L +LA+YG + NFNL+ Sbjct 240 GGPSGVGVAVGNAVRTSLIVVISVTLLVSLAVYGANGNFNLS 281 >gi|315443551|ref|YP_004076430.1| ABC transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length=285 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 157/288 (55%), Positives = 209/288 (73%), Gaps = 4/288 (1%) Query 1 MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRL 60 M T+ V+R+RFPR V NL G L G F ++ + HA ++RKE +RL Sbjct 1 MGTSTVIRSRFPRLVDNL----GRPVAVLGRLGDHVLFYGRAVAGVPHAAVHFRKEIIRL 56 Query 61 IAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 IA+I MG G +A++GGTV IVGF+TL+ +AIQG++SLG+IG+EA TGF AA INVRI Sbjct 57 IAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRI 116 Query 121 AGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 A PVV G+ LAAT GAG TA+LGAMRI+EEIDALE MGI+ + +L STRI+AG+V I PL Sbjct 117 AAPVVAGIGLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPL 176 Query 181 YALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCY 240 Y++A+I+SF++ Q TT VL+GQS G Y+HYF TFL P D+ WSFL+A+++ +++ H Y Sbjct 177 YSIAVILSFIASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTY 236 Query 241 YGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLT 288 +GY A GGP GVG AVG ++R SLV V V L +L++YG + NFNL+ Sbjct 237 FGYFASGGPSGVGAAVGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLS 284 Lambda K H 0.325 0.138 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 470845709104 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40