BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0175
Length=213
Score E
Sequences producing significant alignments: (Bits) Value
gi|254233563|ref|ZP_04926889.1| hypothetical protein TBCG_00173 ... 427 4e-118
gi|31791353|ref|NP_853846.1| mce associated membrane protein [My... 426 1e-117
gi|254549114|ref|ZP_05139561.1| hypothetical protein Mtube_01391... 425 3e-117
gi|148821367|ref|YP_001286121.1| MCE associated membrane protein... 423 7e-117
gi|340625212|ref|YP_004743664.1| putative MCE associated membran... 421 5e-116
gi|15839553|ref|NP_334590.1| hypothetical protein MT0184 [Mycoba... 390 8e-107
gi|323717164|gb|EGB26373.1| MCE associated membrane protein [Myc... 365 2e-99
gi|289760277|ref|ZP_06519655.1| mce associated membrane protein ... 336 2e-90
gi|296167388|ref|ZP_06849790.1| Mce associated membrane protein ... 244 4e-63
gi|240172711|ref|ZP_04751370.1| Mce associated membrane protein ... 241 4e-62
gi|118616801|ref|YP_905133.1| Mce associated membrane protein [M... 241 6e-62
gi|183980449|ref|YP_001848740.1| Mce associated membrane protein... 237 1e-60
gi|118462976|ref|YP_884129.1| hypothetical protein MAV_5009 [Myc... 236 2e-60
gi|254777448|ref|ZP_05218964.1| hypothetical protein MaviaA2_226... 236 2e-60
gi|342859371|ref|ZP_08716025.1| hypothetical protein MCOL_10843 ... 231 4e-59
gi|15828399|ref|NP_302662.1| hypothetical protein ML2595 [Mycoba... 231 8e-59
gi|41409708|ref|NP_962544.1| hypothetical protein MAP3610 [Mycob... 230 9e-59
gi|336460083|gb|EGO38992.1| hypothetical protein MAPs_44650 [Myc... 230 1e-58
gi|254821392|ref|ZP_05226393.1| hypothetical protein MintA_15754... 221 4e-56
gi|315441812|ref|YP_004074691.1| hypothetical protein Mspyr1_012... 209 2e-52
gi|118473174|ref|YP_884556.1| mce associated membrane protein [M... 201 8e-50
gi|145221300|ref|YP_001131978.1| putative MCE associated membran... 199 2e-49
gi|120401168|ref|YP_950997.1| putative MCE associated membrane p... 180 2e-43
gi|108797104|ref|YP_637301.1| putative MCE associated membrane p... 161 5e-38
gi|126432727|ref|YP_001068418.1| putative MCE associated membran... 160 1e-37
gi|333988768|ref|YP_004521382.1| Mce associated membrane protein... 159 2e-37
gi|145223113|ref|YP_001133791.1| hypothetical protein Mflv_2526 ... 65.1 6e-09
gi|111018911|ref|YP_701883.1| hypothetical protein RHA1_ro01914 ... 64.7 8e-09
gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 ... 64.3 1e-08
gi|315443570|ref|YP_004076449.1| hypothetical protein Mspyr1_195... 64.3 1e-08
gi|8439566|gb|AAF74994.1|AF143400_2 exported protein 996A27b [My... 63.2 2e-08
gi|226361930|ref|YP_002779708.1| hypothetical protein ROP_25160 ... 57.0 2e-06
gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245... 55.8 4e-06
gi|342860440|ref|ZP_08717091.1| hypothetical protein MCOL_16236 ... 52.0 6e-05
gi|254818336|ref|ZP_05223337.1| hypothetical protein MintA_00330... 49.7 2e-04
gi|183983966|ref|YP_001852257.1| hypothetical protein MMAR_3994 ... 49.7 3e-04
gi|41409710|ref|NP_962546.1| hypothetical protein MAP3612 [Mycob... 49.3 3e-04
gi|118619078|ref|YP_907410.1| hypothetical protein MUL_3858 [Myc... 48.9 5e-04
gi|120405086|ref|YP_954915.1| hypothetical protein Mvan_4132 [My... 48.5 7e-04
gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 ... 47.4 0.002
gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Myco... 47.0 0.002
gi|296169587|ref|ZP_06851207.1| conserved hypothetical protein [... 47.0 0.002
gi|145221297|ref|YP_001131975.1| hypothetical protein Mflv_0702 ... 47.0 0.002
gi|126432888|ref|YP_001068579.1| hypothetical protein Mjls_0275 ... 46.2 0.003
gi|108797264|ref|YP_637461.1| hypothetical protein Mmcs_0284 [My... 45.8 0.004
gi|254821394|ref|ZP_05226395.1| hypothetical protein MintA_15764... 45.4 0.005
gi|118464562|ref|YP_880216.1| hypothetical protein MAV_0956 [Myc... 45.4 0.006
gi|41406866|ref|NP_959702.1| hypothetical protein MAP0768c [Myco... 45.1 0.006
gi|336461213|gb|EGO40089.1| hypothetical protein MAPs_32980 [Myc... 45.1 0.006
gi|254773845|ref|ZP_05215361.1| hypothetical protein MaviaA2_040... 45.1 0.007
>gi|254233563|ref|ZP_04926889.1| hypothetical protein TBCG_00173 [Mycobacterium tuberculosis C]
gi|254366626|ref|ZP_04982670.1| conserved MCE associated membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|294994648|ref|ZP_06800339.1| putative MCE associated membrane protein [Mycobacterium tuberculosis
210]
22 more sequence titles
Length=235
Score = 427 bits (1099), Expect = 4e-118, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA
Sbjct 23 VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 82
Query 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI
Sbjct 83 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 142
Query 121 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN
Sbjct 143 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 202
Query 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Sbjct 203 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 235
>gi|31791353|ref|NP_853846.1| mce associated membrane protein [Mycobacterium bovis AF2122/97]
gi|121636087|ref|YP_976310.1| putative mce associated membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148659939|ref|YP_001281462.1| putative Mce associated membrane protein [Mycobacterium tuberculosis
H37Ra]
33 more sequence titles
Length=213
Score = 426 bits (1094), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 212/213 (99%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
+KAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA
Sbjct 1 MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
Query 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI
Sbjct 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
Query 121 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN
Sbjct 121 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
Query 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Sbjct 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
>gi|254549114|ref|ZP_05139561.1| hypothetical protein Mtube_01391 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|297632653|ref|ZP_06950433.1| hypothetical protein MtubK4_00941 [Mycobacterium tuberculosis
KZN 4207]
gi|297729628|ref|ZP_06958746.1| hypothetical protein MtubKR_00971 [Mycobacterium tuberculosis
KZN R506]
gi|313656954|ref|ZP_07813834.1| hypothetical protein MtubKV_00956 [Mycobacterium tuberculosis
KZN V2475]
Length=235
Score = 425 bits (1092), Expect = 3e-117, Method: Compositional matrix adjust.
Identities = 212/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA
Sbjct 23 VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 82
Query 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI
Sbjct 83 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 142
Query 121 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
IECGTGDFGAQASLYTS LVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN
Sbjct 143 IECGTGDFGAQASLYTSTLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 202
Query 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Sbjct 203 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 235
>gi|148821367|ref|YP_001286121.1| MCE associated membrane protein [Mycobacterium tuberculosis F11]
gi|253797097|ref|YP_003030098.1| hypothetical protein TBMG_00176 [Mycobacterium tuberculosis KZN
1435]
gi|289552427|ref|ZP_06441637.1| MCE-associated membrane protein [Mycobacterium tuberculosis KZN
605]
7 more sequence titles
Length=213
Score = 423 bits (1088), Expect = 7e-117, Method: Compositional matrix adjust.
Identities = 211/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
+KAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA
Sbjct 1 MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
Query 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI
Sbjct 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
Query 121 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
IECGTGDFGAQASLYTS LVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN
Sbjct 121 IECGTGDFGAQASLYTSTLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
Query 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Sbjct 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
>gi|340625212|ref|YP_004743664.1| putative MCE associated membrane protein [Mycobacterium canettii
CIPT 140010059]
gi|340003402|emb|CCC42522.1| putative conserved MCE associated membrane protein [Mycobacterium
canettii CIPT 140010059]
Length=213
Score = 421 bits (1081), Expect = 5e-116, Method: Compositional matrix adjust.
Identities = 210/213 (99%), Positives = 211/213 (99%), Gaps = 0/213 (0%)
Query 1 VKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
+KAADSAESDAGADQT PQVKAADSA SDAGELGEDACPEQALVERRPSRLRRGWLVGIA
Sbjct 1 MKAADSAESDAGADQTSPQVKAADSAVSDAGELGEDACPEQALVERRPSRLRRGWLVGIA 60
Query 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI
Sbjct 61 ATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKI 120
Query 121 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN
Sbjct 121 IECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSN 180
Query 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Sbjct 181 TDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
>gi|15839553|ref|NP_334590.1| hypothetical protein MT0184 [Mycobacterium tuberculosis CDC1551]
gi|13879665|gb|AAK44404.1| hypothetical protein MT0184 [Mycobacterium tuberculosis CDC1551]
gi|339296886|gb|AEJ48996.1| hypothetical protein CCDC5180_0159 [Mycobacterium tuberculosis
CCDC5180]
Length=194
Score = 390 bits (1001), Expect = 8e-107, Method: Compositional matrix adjust.
Identities = 193/194 (99%), Positives = 194/194 (100%), Gaps = 0/194 (0%)
Query 20 VKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALR 79
+KAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALR
Sbjct 1 MKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALR 60
Query 80 SHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSML 139
SHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSML
Sbjct 61 SHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSML 120
Query 140 VEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALD 199
VEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALD
Sbjct 121 VEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALD 180
Query 200 EGRYKIAKLDQVTK 213
EGRYKIAKLDQVTK
Sbjct 181 EGRYKIAKLDQVTK 194
>gi|323717164|gb|EGB26373.1| MCE associated membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=216
Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/215 (94%), Positives = 202/215 (94%), Gaps = 9/215 (4%)
Query 8 ESDAGADQTGP---------QVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVG 58
E DAGA Q P +VKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVG
Sbjct 2 EGDAGAGQLNPADANKSSSTEVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVG 61
Query 59 IAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQ 118
IAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQ
Sbjct 62 IAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQ 121
Query 119 KIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKV 178
KIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKV
Sbjct 122 KIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKV 181
Query 179 SNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
SNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Sbjct 182 SNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 216
>gi|289760277|ref|ZP_06519655.1| mce associated membrane protein [Mycobacterium tuberculosis T85]
gi|289715841|gb|EFD79853.1| mce associated membrane protein [Mycobacterium tuberculosis T85]
Length=176
Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 48 PSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQA 107
PSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQA
Sbjct 11 PSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQA 70
Query 108 PDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGS 167
PDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGS
Sbjct 71 PDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGS 130
Query 168 VDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
VDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Sbjct 131 VDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 176
>gi|296167388|ref|ZP_06849790.1| Mce associated membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897332|gb|EFG76936.1| Mce associated membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=278
Score = 244 bits (624), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/239 (57%), Positives = 167/239 (70%), Gaps = 27/239 (11%)
Query 1 VKAADSAESDAGADQTGPQVKAADSAESDAG------------------------ELGED 36
V A DSA+++ G D T P+ A SAE++ G + E
Sbjct 41 VTAEDSAQAEDGPDSTSPEPTAEASAEAEDGPDLIGPAVSAEEPSTAPEEPAEPDDATEQ 100
Query 37 ACPEQALVE--RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAA 94
PE + E R PSRL RGWL GIA+TL+ LA +GA GYFALR H ESQ++AR + AA
Sbjct 101 TGPEAGIGEAARGPSRLGRGWLAGIASTLVLLAAAVGAGGYFALRYHHESQAVARGNAAA 160
Query 95 IEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTD 154
++AA +CV+ATQAPD AM+AS QKII+CGT F +QA LYTSMLV+AYQAA+V VQV+D
Sbjct 161 LKAAVECVSATQAPDTNAMAASEQKIIDCGTDAFRSQALLYTSMLVQAYQAANVRVQVSD 220
Query 155 MRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
+RAAVERNN DGSVDVLVA+RVKV+N D +E GYRLRV+MA+ EG+YKI+KLDQVTK
Sbjct 221 LRAAVERNNPDGSVDVLVAVRVKVAN-DQTQNETGYRLRVKMAMAEGQYKISKLDQVTK 278
>gi|240172711|ref|ZP_04751370.1| Mce associated membrane protein [Mycobacterium kansasii ATCC
12478]
Length=258
Score = 241 bits (616), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/215 (62%), Positives = 162/215 (76%), Gaps = 10/215 (4%)
Query 6 SAESDAGADQTGPQVKAADSAESD-------AGELGEDACPEQALVERRPSRLRRGWLVG 58
+AES+AG D + DSAES+ + GED A VERRPSRL RGWLVG
Sbjct 47 TAESEAGPDSA--EATDEDSAESEDEAGPDISDSTGEDQTAAPA-VERRPSRLGRGWLVG 103
Query 59 IAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQ 118
I+A L+ +AGG+G GY ALR+HQ+S +IAR + AA++ AKDCVA TQAPD +M+AS Q
Sbjct 104 ISAALVLVAGGIGTGGYLALRAHQQSAAIARNNAAALQVAKDCVAVTQAPDTNSMAASEQ 163
Query 119 KIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKV 178
KII+CGT + +QA LY+SMLV+AYQAA+VHVQ+TDMRAAVERNN DGSVDVLVALRV++
Sbjct 164 KIIDCGTDQYRSQAVLYSSMLVQAYQAANVHVQLTDMRAAVERNNPDGSVDVLVALRVRM 223
Query 179 SNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
SN + E GYRLRVRM +G+YKI+KLDQVTK
Sbjct 224 SNDQAQDQETGYRLRVRMTPTDGQYKISKLDQVTK 258
>gi|118616801|ref|YP_905133.1| Mce associated membrane protein [Mycobacterium ulcerans Agy99]
gi|118568911|gb|ABL03662.1| conserved Mce associated membrane protein [Mycobacterium ulcerans
Agy99]
Length=224
Score = 241 bits (614), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 144/218 (67%), Positives = 165/218 (76%), Gaps = 7/218 (3%)
Query 3 AADSAESDAGADQT-GPQVKAADSAESDAGELGEDACPE---QAL---VERRPSRLRRGW 55
A DS+ES+A D T P+ +AA + A E ED QA+ VERRPSRL RGW
Sbjct 7 AEDSSESEAAPDSTEQPEPEAAAGSHDAAQEQAEDTEQSGDGQAVEPGVERRPSRLGRGW 66
Query 56 LVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSA 115
LVGI+A LL AGG+GA GY ALRSHQESQ IAR D AA+EAAKDCVAATQAPD AM+A
Sbjct 67 LVGISAVLLLAAGGIGAGGYLALRSHQESQVIARNDAAALEAAKDCVAATQAPDTSAMAA 126
Query 116 SMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALR 175
S QKII+CGT + +QA LY+SMLV+AYQAA+VHVQ+T+MRAAVERNN DGSVDVLVALR
Sbjct 127 SEQKIIDCGTDQYRSQAVLYSSMLVQAYQAANVHVQLTEMRAAVERNNPDGSVDVLVALR 186
Query 176 VKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
VK+SN E GYRLRVRM EG+YKI+KLDQV K
Sbjct 187 VKMSNDQDQNQETGYRLRVRMTPTEGQYKISKLDQVAK 224
>gi|183980449|ref|YP_001848740.1| Mce associated membrane protein [Mycobacterium marinum M]
gi|183173775|gb|ACC38885.1| conserved Mce associated membrane protein [Mycobacterium marinum
M]
Length=226
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/222 (64%), Positives = 161/222 (73%), Gaps = 13/222 (5%)
Query 5 DSAESDAGADQTGPQVKA----------ADSAESDAGELGEDACPEQAL---VERRPSRL 51
DSAES+A D T +D A + E E + QA+ VERRPSRL
Sbjct 5 DSAESEAAPDSTDQPEPEAAAEPEASAGSDDAAQEQAEDTEQSGDGQAVEPGVERRPSRL 64
Query 52 RRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAG 111
RGWLVGI+A LL AGG+GA GY ALRSHQESQ IAR D AA+EAAKDCVAATQAPD
Sbjct 65 GRGWLVGISAVLLLAAGGIGAGGYLALRSHQESQVIARNDAAALEAAKDCVAATQAPDTS 124
Query 112 AMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVL 171
AM+AS QKII+CGT + +QA LY+SMLV+AYQAA+VHVQ+TDMRAAVERNN DGSVDVL
Sbjct 125 AMAASEQKIIDCGTDQYRSQAVLYSSMLVQAYQAANVHVQLTDMRAAVERNNPDGSVDVL 184
Query 172 VALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
VALRVK+SN E GYRLRVRM EG+YKI+KLDQV K
Sbjct 185 VALRVKMSNDQDQNQETGYRLRVRMTPTEGQYKISKLDQVAK 226
>gi|118462976|ref|YP_884129.1| hypothetical protein MAV_5009 [Mycobacterium avium 104]
gi|118164263|gb|ABK65160.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=233
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/212 (62%), Positives = 157/212 (75%), Gaps = 3/212 (1%)
Query 2 KAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAA 61
K DS + +QTG Q + ES A + +DA P A V R PSRL RGWL IAA
Sbjct 25 KDEDSTAPASTDEQTGSQGAPGVAGES-APDDADDAVPVAA-VPRGPSRLGRGWLAAIAA 82
Query 62 TLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKII 121
L+ A G+GA GY ALR H ESQ IAR + AA++AA DCV ATQAPD AM+AS QKII
Sbjct 83 VLVLCAAGIGAGGYLALRYHHESQVIARNNAAALKAAVDCVEATQAPDTNAMTASEQKII 142
Query 122 ECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNT 181
+CGT + +QA LYTSMLV+AYQ+A+VHVQV+D+RAAVERNN DGS+D+LVALRVKV+ +
Sbjct 143 DCGTDAYRSQALLYTSMLVQAYQSANVHVQVSDVRAAVERNNPDGSIDILVALRVKVA-S 201
Query 182 DSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
D +E GYRLRV+MAL EG+YKI+KLDQVTK
Sbjct 202 DQSQNESGYRLRVKMALAEGQYKISKLDQVTK 233
>gi|254777448|ref|ZP_05218964.1| hypothetical protein MaviaA2_22656 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=233
Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/212 (61%), Positives = 157/212 (75%), Gaps = 3/212 (1%)
Query 2 KAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAA 61
K DS + +QTG Q + ES A + +DA P A V R PSRL RGWL IAA
Sbjct 25 KDEDSTAPASTDEQTGSQGAPGVAGES-APDDADDAVPVAA-VPRGPSRLGRGWLAAIAA 82
Query 62 TLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKII 121
L+ A G+GA GY ALR H ESQ IAR + AA++AA DCV ATQAPD AM+AS QKII
Sbjct 83 VLVLCAAGIGAGGYLALRYHHESQVIARNNAAALKAAVDCVEATQAPDTNAMTASEQKII 142
Query 122 ECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNT 181
+CGT + +QA LYTSMLV+AYQ+A++HVQV+D+RAAVERNN DGS+D+LVALRVKV+ +
Sbjct 143 DCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAVERNNPDGSIDILVALRVKVA-S 201
Query 182 DSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
D +E GYRLRV+MAL EG+YKI+KLDQVTK
Sbjct 202 DQSQNESGYRLRVKMALAEGQYKISKLDQVTK 233
>gi|342859371|ref|ZP_08716025.1| hypothetical protein MCOL_10843 [Mycobacterium colombiense CECT
3035]
gi|342133612|gb|EGT86815.1| hypothetical protein MCOL_10843 [Mycobacterium colombiense CECT
3035]
Length=260
Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/238 (55%), Positives = 161/238 (68%), Gaps = 27/238 (11%)
Query 2 KAADSAESDAGADQTGPQ------VKAADSA----ESDAGELGE-DACPEQ--------- 41
K D+A + GA QTGPQ V++ D A ES++G+ E D PE
Sbjct 24 KNEDTAAPENGAGQTGPQDDAEDAVQSPDGAAGAGESESGDTPESDGTPEDDAESGAAEA 83
Query 42 ------ALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAI 95
R PSR+ RGWL IAA L+ A +G GY AL H +SQ IAR D AA+
Sbjct 84 EAAEPAVATPRGPSRVGRGWLATIAAILVLCALAVGGGGYLALHYHHQSQQIARNDSAAL 143
Query 96 EAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDM 155
+AA +CV+ATQAPD AM+AS QKII+CGT F +QA LYTSMLV+AYQAA++HVQV+D+
Sbjct 144 KAAVECVSATQAPDTNAMTASEQKIIDCGTDAFRSQALLYTSMLVQAYQAANIHVQVSDV 203
Query 156 RAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
RAAVERNN DGS+D+LVALRVKV+ +D + E GYRLRV+MA EG+YKI+KLDQVTK
Sbjct 204 RAAVERNNPDGSIDILVALRVKVA-SDQNQSESGYRLRVKMAFAEGQYKISKLDQVTK 260
>gi|15828399|ref|NP_302662.1| hypothetical protein ML2595 [Mycobacterium leprae TN]
gi|221230876|ref|YP_002504292.1| hypothetical protein MLBr_02595 [Mycobacterium leprae Br4923]
gi|13093829|emb|CAC32127.1| possible membrane protein [Mycobacterium leprae]
gi|219933983|emb|CAR72695.1| possible membrane protein [Mycobacterium leprae Br4923]
Length=182
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/165 (70%), Positives = 133/165 (81%), Gaps = 0/165 (0%)
Query 49 SRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAP 108
SRL RGWL GIA LL G+G GY LR HQ+SQ++AR D AA++ A DCVAATQAP
Sbjct 18 SRLGRGWLTGIAVALLLAGCGIGTGGYCMLRYHQDSQAMARNDNAALKTALDCVAATQAP 77
Query 109 DAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSV 168
D M+AS QKII+CGT F AQA LYT+MLV+AYQAA+VHVQV+DMRAAVER+NNDGS+
Sbjct 78 DTNTMAASEQKIIDCGTDAFHAQALLYTNMLVQAYQAANVHVQVSDMRAAVERHNNDGSI 137
Query 169 DVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
DVLVALRVK+SN + E GYRLRV+MAL EG+YKI+KLDQVTK
Sbjct 138 DVLVALRVKLSNDRAHNQETGYRLRVKMALAEGQYKISKLDQVTK 182
>gi|41409708|ref|NP_962544.1| hypothetical protein MAP3610 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398540|gb|AAS06160.1| hypothetical protein MAP_3610 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=213
Score = 230 bits (587), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 114/168 (68%), Positives = 137/168 (82%), Gaps = 1/168 (0%)
Query 46 RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAAT 105
R PSRL RGWL IAA L+ A G+GA GY ALR H ESQ IAR + AA++AA DCV AT
Sbjct 47 RGPSRLGRGWLAAIAAVLVLCAAGIGAGGYLALRYHHESQVIARNNAAALKAAVDCVEAT 106
Query 106 QAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNND 165
QAPD AM+AS QKII+CGT + +QA LYTSMLV+AYQ+A++HVQV+D+RAAVERNN D
Sbjct 107 QAPDTNAMTASEQKIIDCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAVERNNPD 166
Query 166 GSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
GS+D+LVALRVKV+ +D +E GYRLRV+MAL EG+YKI+KLDQVTK
Sbjct 167 GSIDILVALRVKVA-SDQSQNESGYRLRVKMALAEGQYKISKLDQVTK 213
>gi|336460083|gb|EGO38992.1| hypothetical protein MAPs_44650 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=232
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/168 (68%), Positives = 137/168 (82%), Gaps = 1/168 (0%)
Query 46 RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAAT 105
R PSRL RGWL IAA L+ A G+GA GY ALR H ESQ IAR + AA++AA DCV AT
Sbjct 66 RGPSRLGRGWLAAIAAVLVLCAAGIGAGGYLALRYHHESQVIARNNAAALKAAVDCVEAT 125
Query 106 QAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNND 165
QAPD AM+AS QKII+CGT + +QA LYTSMLV+AYQ+A++HVQV+D+RAAVERNN D
Sbjct 126 QAPDTNAMTASEQKIIDCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAVERNNPD 185
Query 166 GSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
GS+D+LVALRVKV+ +D +E GYRLRV+MAL EG+YKI+KLDQVTK
Sbjct 186 GSIDILVALRVKVA-SDQSQNESGYRLRVKMALAEGQYKISKLDQVTK 232
>gi|254821392|ref|ZP_05226393.1| hypothetical protein MintA_15754 [Mycobacterium intracellulare
ATCC 13950]
Length=226
Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/212 (59%), Positives = 150/212 (71%), Gaps = 10/212 (4%)
Query 2 KAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAA 61
K DS D+GA+Q PQ D AES GE G A R PSR+ RGWL IA
Sbjct 25 KDEDSTAPDSGAEQADPQGDPQDPAES--GEPG-------ATAPRGPSRVGRGWLAAIAV 75
Query 62 TLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKII 121
L AG +GA GY A R H++S IAR D A++AA +CV ATQAPD AM+A+ QKII
Sbjct 76 LLALCAGAIGAGGYLAQRYHRDSLVIARNDATALKAAVECVTATQAPDTNAMTAAEQKII 135
Query 122 ECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNT 181
ECGT F QA LYTSMLV+AYQAA++HVQV+D+RAAVERNN DGS+++LVALRVKV+ +
Sbjct 136 ECGTDTFRTQALLYTSMLVQAYQAANIHVQVSDVRAAVERNNPDGSINILVALRVKVA-S 194
Query 182 DSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK 213
D +E GYRLRV+MA EG+Y+I+KLDQVTK
Sbjct 195 DQTENETGYRLRVKMAFAEGQYRISKLDQVTK 226
>gi|315441812|ref|YP_004074691.1| hypothetical protein Mspyr1_01230 [Mycobacterium sp. Spyr1]
gi|315260115|gb|ADT96856.1| hypothetical protein Mspyr1_01230 [Mycobacterium sp. Spyr1]
Length=209
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/206 (52%), Positives = 141/206 (69%), Gaps = 2/206 (0%)
Query 8 ESDAGADQTGPQVKAADSAESDAGELGEDACPEQALV--ERRPSRLRRGWLVGIAATLLA 65
E DAG + P+ AD A D P+Q + RRP+RL GW+ I A LL
Sbjct 2 EGDAGTSRLIPEADTADEVRDTAPAEASDPSPDQDVPADTRRPTRLGNGWVATICAVLLL 61
Query 66 LAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGT 125
LAGG AAG LR+++ + AR D AA++AAKDCVAATQAPD AM+A+ KI+EC T
Sbjct 62 LAGGAVAAGVLTLRTNERAAETARSDAAALQAAKDCVAATQAPDTAAMTAAQSKILECST 121
Query 126 GDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDA 185
G+FG QA L++S++ EAYQAA+ V V D+RAAVER+N DG+V+VLVA+RV+++N ++
Sbjct 122 GEFGVQAGLFSSIVAEAYQAANATVAVDDLRAAVERHNEDGTVNVLVAVRVRITNAEAAD 181
Query 186 HEVGYRLRVRMALDEGRYKIAKLDQV 211
VGYRLR MA DEG+Y+I+ LDQV
Sbjct 182 QRVGYRLRATMAWDEGQYRISSLDQV 207
>gi|118473174|ref|YP_884556.1| mce associated membrane protein [Mycobacterium smegmatis str.
MC2 155]
gi|118174461|gb|ABK75357.1| probable conserved mce associated membrane protein [Mycobacterium
smegmatis str. MC2 155]
Length=202
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/209 (57%), Positives = 148/209 (71%), Gaps = 13/209 (6%)
Query 8 ESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVE---RRPSRLRRGWLVGIAATLL 64
E DAGA Q P + + E EQ VE RRPSRL RGW+ + A L+
Sbjct 2 EGDAGASQLNPTDQQQEHTEPQI---------EQTTVEADARRPSRLGRGWMATVCAALV 52
Query 65 ALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECG 124
+A LG GY ALRSH +S IAR++ A++AAKDCV ATQAPD AM+A+ KIIEC
Sbjct 53 LVAAALGVGGYLALRSHLDSNVIARDEAEAMQAAKDCVTATQAPDTAAMAAAQAKIIECA 112
Query 125 TGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSD 184
TGDFGAQA LY+ +L++AYQAA+V VQV+DMRAAVE++N+DGS+D+LVA+RV V+NT+
Sbjct 113 TGDFGAQAVLYSGILLDAYQAANVQVQVSDMRAAVEKHNDDGSMDLLVAVRVLVTNTEKA 172
Query 185 AHEVGYRLRVRMALDE-GRYKIAKLDQVT 212
E GYRLRV+MA DE G YK+A+LDQVT
Sbjct 173 NEEQGYRLRVKMARDEDGLYKVARLDQVT 201
>gi|145221300|ref|YP_001131978.1| putative MCE associated membrane protein [Mycobacterium gilvum
PYR-GCK]
gi|145213786|gb|ABP43190.1| putative conserved MCE associated membrane protein [Mycobacterium
gilvum PYR-GCK]
Length=209
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 139/206 (68%), Gaps = 2/206 (0%)
Query 8 ESDAGADQTGPQVKAADSAESDAGELGEDACPEQALV--ERRPSRLRRGWLVGIAATLLA 65
E DAG + P+ AD D P+Q + RRP+RL GW+ I A LL
Sbjct 2 EGDAGTSRLIPEADTADEVVDTPTAEASDPSPDQDVPADTRRPTRLGNGWVATICAVLLL 61
Query 66 LAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGT 125
LAGG AAG +LR+++ + AR D AA++AAKDCVAATQAPD AM+A+ KI+EC T
Sbjct 62 LAGGAVAAGVLSLRANERAAETARSDEAALQAAKDCVAATQAPDTAAMTAAQSKILECST 121
Query 126 GDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDA 185
G+F QA L++S++ EAYQAA+ V V D+RAAVER+N DG+V+VLVA+RV+++N ++
Sbjct 122 GEFRVQAGLFSSIVAEAYQAANATVAVDDLRAAVERHNEDGTVNVLVAVRVRITNAEAAD 181
Query 186 HEVGYRLRVRMALDEGRYKIAKLDQV 211
VGYRLR MA DE +Y+I+ L+QV
Sbjct 182 QRVGYRLRATMAWDEAQYRISSLEQV 207
>gi|120401168|ref|YP_950997.1| putative MCE associated membrane protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953986|gb|ABM10991.1| putative conserved MCE associated membrane protein [Mycobacterium
vanbaalenii PYR-1]
Length=214
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/166 (59%), Positives = 124/166 (75%), Gaps = 0/166 (0%)
Query 46 RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAAT 105
RRPSRL GW+ I LL L GG AGY ALR++ + +AR D AA++AAK+CVAAT
Sbjct 47 RRPSRLGTGWVATICVVLLLLGGGGITAGYLALRANARAAEVARSDDAALQAAKECVAAT 106
Query 106 QAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNND 165
QAPD AM+A+ KI+EC TG+FG QA L++S+L EAYQAA V V D+RAAVER N D
Sbjct 107 QAPDTAAMTAAQSKILECSTGEFGVQAGLFSSVLAEAYQAADATVAVDDLRAAVERRNED 166
Query 166 GSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQV 211
G+V+VLVA+RV++SN+++ VGYRLR MA DEG+Y+I+ LDQV
Sbjct 167 GTVNVLVAVRVRISNSEAADQRVGYRLRATMAFDEGQYRISSLDQV 212
>gi|108797104|ref|YP_637301.1| putative MCE associated membrane protein [Mycobacterium sp. MCS]
gi|119866189|ref|YP_936141.1| putative MCE associated membrane protein [Mycobacterium sp. KMS]
gi|108767523|gb|ABG06245.1| putative conserved MCE associated membrane protein [Mycobacterium
sp. MCS]
gi|119692278|gb|ABL89351.1| putative conserved MCE associated membrane protein [Mycobacterium
sp. KMS]
Length=218
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/167 (65%), Positives = 130/167 (78%), Gaps = 0/167 (0%)
Query 46 RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAAT 105
RRP RL RGWL I A LL L G G GY ALRSH+ES +A + AA+ AA+DCVAAT
Sbjct 51 RRPPRLGRGWLTAICAVLLLLGAGAGVGGYLALRSHEESAQLAENEAAAVAAARDCVAAT 110
Query 106 QAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNND 165
APDA AM+AS KI+EC TGDFG QA LY +LV+AY+AA V VQV+DMRAAVE++N D
Sbjct 111 HAPDAAAMTASQAKILECSTGDFGVQAGLYGGLLVDAYRAAQVQVQVSDMRAAVEKHNAD 170
Query 166 GSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVT 212
GS+DVLVA+RVKV+N++S E GYRLRV+MA D+G YK+A+LDQVT
Sbjct 171 GSIDVLVAVRVKVTNSESADQEQGYRLRVQMAPDDGTYKVARLDQVT 217
>gi|126432727|ref|YP_001068418.1| putative MCE associated membrane protein [Mycobacterium sp. JLS]
gi|126232527|gb|ABN95927.1| putative conserved MCE associated membrane protein [Mycobacterium
sp. JLS]
Length=223
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/167 (65%), Positives = 130/167 (78%), Gaps = 0/167 (0%)
Query 46 RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAAT 105
RRP RL RGWL I A LL L G G GY ALRSH+ES +A + AA+ AA+DCVAAT
Sbjct 56 RRPPRLGRGWLTAICAVLLLLGAGAGVGGYLALRSHEESTQLAENEAAAVAAARDCVAAT 115
Query 106 QAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNND 165
APDA AM+ S KI+EC TGDFG QA LY +LV+AY+AA+V VQV+DMRAAVE++N D
Sbjct 116 HAPDAAAMTESQAKILECSTGDFGVQAGLYGGLLVDAYRAANVQVQVSDMRAAVEKHNAD 175
Query 166 GSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVT 212
GS+DVLVA+RVKV+N+++ E GYRLRV+MA DEG YK+A+LDQVT
Sbjct 176 GSIDVLVAVRVKVTNSEAADQEQGYRLRVQMAPDEGTYKVARLDQVT 222
>gi|333988768|ref|YP_004521382.1| Mce associated membrane protein [Mycobacterium sp. JDM601]
gi|333484736|gb|AEF34128.1| Mce associated membrane protein [Mycobacterium sp. JDM601]
Length=152
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/139 (54%), Positives = 102/139 (74%), Gaps = 0/139 (0%)
Query 75 YFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASL 134
Y LR H SQ++AR++ A+EAAK CV ATQAPD ++ + Q+I++C G+F QA L
Sbjct 14 YQGLRDHAASQAMARDNAEAVEAAKHCVLATQAPDGADVAVAQQQILDCAAGEFRTQAGL 73
Query 135 YTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRV 194
Y + V+AY+AA VH ++T+M AAVERNN DGSVDVLVA RVKV N ++ EVGYRLR
Sbjct 74 YGEIFVQAYRAAKVHTELTEMGAAVERNNEDGSVDVLVAFRVKVDNVEAQGKEVGYRLRA 133
Query 195 RMALDEGRYKIAKLDQVTK 213
+M ++G+Y+I +LDQV +
Sbjct 134 QMVREDGQYRIGRLDQVAR 152
>gi|145223113|ref|YP_001133791.1| hypothetical protein Mflv_2526 [Mycobacterium gilvum PYR-GCK]
gi|145215599|gb|ABP45003.1| hypothetical protein Mflv_2526 [Mycobacterium gilvum PYR-GCK]
Length=295
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/185 (30%), Positives = 92/185 (50%), Gaps = 13/185 (7%)
Query 33 LGEDACPEQALVERRPSRLRRGWL-VGIAATL----LALAGGLGAAGYFALRSHQESQSI 87
+GE P + + RRP GW VG+A L L A L +GY L H++++++
Sbjct 117 VGEAESPTRKRLLRRP-----GWASVGVALVLVIAVLGTAALLAVSGYMRL-EHRDAENL 170
Query 88 AREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAAS 147
+++ AA+ V + D +Q+II+ TG F + V+ Q +
Sbjct 171 RQQNAEYAAAARQSVVTLMSLDFNKAEEDVQRIIDNSTGQFKDDFESQAAEFVKVAQDSK 230
Query 148 VHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNT-DSDAHEVGYRLRVRMALDEGRYKIA 206
V +VT AVER DG+ +VLVA +V+NT +D +RL V + ++G+ K++
Sbjct 231 VVTEVTVNSTAVERMTGDGA-EVLVAASSRVTNTAGADQEPRTWRLSVSLVREDGQIKMS 289
Query 207 KLDQV 211
K++ V
Sbjct 290 KVEFV 294
>gi|111018911|ref|YP_701883.1| hypothetical protein RHA1_ro01914 [Rhodococcus jostii RHA1]
gi|110818441|gb|ABG93725.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=175
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/136 (35%), Positives = 72/136 (53%), Gaps = 3/136 (2%)
Query 73 AGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQA 132
+GYF +H++++ A++ +EAA+ V D +QK+++ TG+F +
Sbjct 37 SGYFGY-THRQAEQEAQQRSEILEAARQGVVNLTTMDYERADEDVQKVLDGSTGEFRDEF 95
Query 133 SLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEV-GYR 191
+ L+ Q A V Q +AA+E N D + DVLVA+ KVSN A E G R
Sbjct 96 EARSKDLIAVMQEAKVKSQGEVRQAAIETQNGD-AADVLVAVAQKVSNAGGAAEEPRGQR 154
Query 192 LRVRMALDEGRYKIAK 207
+RV M L++G YKI K
Sbjct 155 MRVTMQLEDGTYKIVK 170
>gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 [Rhodococcus opacus B4]
gi|226239496|dbj|BAH49844.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=189
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/176 (35%), Positives = 92/176 (53%), Gaps = 16/176 (9%)
Query 35 EDACPEQALVERRPSRLRRGWLVGIAA-TLLALAGGLGAAGYFALRSHQESQSIAREDLA 93
EDA PE R P+ G+A ++LALA L +GYF +H++++ A++
Sbjct 22 EDAAPE----PRTPA-----VTAGVAILSVLALAF-LAVSGYFGY-THRQAEQEAQQRSE 70
Query 94 AIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVT 153
++AA+ V D +QK+++ G+F + + L+ Q A V V
Sbjct 71 IVDAARQGVVNLTTMDFERADEDVQKVLDGSAGEFRDEFEARSKDLIAVMQEARVK-SVG 129
Query 154 DMR-AAVERNNNDGSVDVLVALRVKVSNTDSDAHEV-GYRLRVRMALDEGRYKIAK 207
++R AA+ER + D S DVLVA+ KVSN A E G R+RV M L++G YKI K
Sbjct 130 EVRQAAIERQDGD-SADVLVAVAQKVSNAGGAAEEPRGQRMRVTMQLEDGTYKIVK 184
>gi|315443570|ref|YP_004076449.1| hypothetical protein Mspyr1_19530 [Mycobacterium sp. Spyr1]
gi|315261873|gb|ADT98614.1| hypothetical protein Mspyr1_19530 [Mycobacterium sp. Spyr1]
Length=309
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/172 (32%), Positives = 88/172 (52%), Gaps = 9/172 (5%)
Query 47 RPSRLRR-GWL-VGIAATL----LALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKD 100
R RLRR GW VG+A L L A L +GY L H++++++ +++ AA+
Sbjct 139 RKRRLRRPGWASVGVALVLVIAVLGTAALLAVSGYMRL-EHRDAENLRQQNAEYAAAARQ 197
Query 101 CVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVE 160
V + D +Q+II+ TG F + V+ Q + V +VT AVE
Sbjct 198 SVVTLMSLDFNKAEEDVQRIIDNSTGQFKDDFESQAAEFVKVAQDSKVVTEVTVNSTAVE 257
Query 161 RNNNDGSVDVLVALRVKVSNT-DSDAHEVGYRLRVRMALDEGRYKIAKLDQV 211
R DG+ +VLVA +V+NT +D +RL V + ++G+ K++K++ V
Sbjct 258 RMTGDGA-EVLVAASSRVTNTAGADQEPRTWRLSVSLVREDGQIKMSKVEFV 308
>gi|8439566|gb|AAF74994.1|AF143400_2 exported protein 996A27b [Mycobacterium avium]
Length=108
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/74 (53%), Positives = 45/74 (61%), Gaps = 2/74 (2%)
Query 14 DQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAA 73
+QTG Q + ES A + +DA P A V R PSRL RGWL IAA L+ A G+GA
Sbjct 37 EQTGSQGAPGVAGES-APDDADDAVP-VAAVPRGPSRLGRGWLAAIAAVLVLCAAGIGAG 94
Query 74 GYFALRSHQESQSI 87
GY ALR H ESQ I
Sbjct 95 GYLALRYHHESQVI 108
>gi|226361930|ref|YP_002779708.1| hypothetical protein ROP_25160 [Rhodococcus opacus B4]
gi|226240415|dbj|BAH50763.1| hypothetical protein [Rhodococcus opacus B4]
Length=228
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (30%), Positives = 66/138 (48%), Gaps = 2/138 (1%)
Query 76 FAL-RSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASL 134
F L SH Q+ A DL ++ + V P A + S Q+I++ TG++ +
Sbjct 90 FGLSHSHAARQAAADHDLELLQGTRQVVINLITPSAADPAGSAQRILDGATGEWKTEFES 149
Query 135 YTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEV-GYRLR 193
+ ++ + + A VER N+DG+ V+VA KVSN E +RLR
Sbjct 150 TKTEFIDTIAQSKTESTGEILGAGVERANDDGTTSVMVAAVTKVSNAAGAKDEPRTWRLR 209
Query 194 VRMALDEGRYKIAKLDQV 211
V++ D YK+AK++ V
Sbjct 210 VQVGKDGDLYKLAKIEVV 227
>gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245 [Mycobacterium intracellulare
ATCC 13950]
Length=292
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/206 (28%), Positives = 97/206 (48%), Gaps = 30/206 (14%)
Query 23 ADSAESDAGELGEDACPEQALVERRPSRLRR---------GWLVGIAATLLALAGGLGAA 73
AD AE++ E+ D PE A E P+R RR W V + +L + + A+
Sbjct 99 ADEAETEKEEVS-DETPEDAEPETEPARSRRRLRMPPLSVTWKVAV---ILLICAFVAAS 154
Query 74 GYFALRSHQ---ESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTG---- 126
GY H+ SQ IA + A+ V + D +Q++I+ TG
Sbjct 155 GYMMWNRHEVNERSQRIAN----FVAGARQGVVNLTSMDCNKAKEDVQRVIDSSTGQFHD 210
Query 127 DFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAH 186
DF A+A +T+++ + + V + T AAV+ N D ++ VLVA +++N
Sbjct 211 DFQARAKDFTTVV----EQSKVVTKGTVNAAAVQSINGDFAL-VLVAATSRITNAAGAKD 265
Query 187 EV-GYRLRVRMALDEGRYKIAKLDQV 211
E +RL+V + D G+YK++ ++ +
Sbjct 266 EPRNWRLKVTVKNDGGQYKMSNVEFI 291
>gi|342860440|ref|ZP_08717091.1| hypothetical protein MCOL_16236 [Mycobacterium colombiense CECT
3035]
gi|342132095|gb|EGT85336.1| hypothetical protein MCOL_16236 [Mycobacterium colombiense CECT
3035]
Length=263
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/167 (29%), Positives = 79/167 (48%), Gaps = 11/167 (6%)
Query 46 RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAA--IEAAKDCVA 103
RRP +R + G+ AT+L AG L GY + H ++ LAA AA+ +
Sbjct 102 RRP---QRKTVAGVVATVL-FAGSLAGTGYMLWQHHI---AVHNRQLAAEFSTAARQGIT 154
Query 104 ATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNN 163
A + D +Q+ I+ TGD Q ++ ++++V + V +VT AVE
Sbjct 155 AFMSIDPAHAKEDVQRAIDASTGDQKNQLAVLSTLIVNKAEETKVGTKVTIEAVAVESLT 214
Query 164 NDGSVDVLVALRVKVSNTDS-DAHEVGYRLRVRMALDEGRYKIAKLD 209
++ V VLVA + D+ +R+ V M D G+ K++K+D
Sbjct 215 DNSGV-VLVAAKTDPFGPDNLKPPPALFRVSVNMDRDGGQLKMSKID 260
>gi|254818336|ref|ZP_05223337.1| hypothetical protein MintA_00330 [Mycobacterium intracellulare
ATCC 13950]
Length=264
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (28%), Positives = 76/166 (46%), Gaps = 9/166 (5%)
Query 46 RRPSRLRRGWLVGI--AATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVA 103
RRP R VGI A+T LA +G + A+ +H + + AA+ V
Sbjct 103 RRPGRKTIAAGVGIVLASTSLAASGYMLWQHRIAVHNHHLAAEFS-------AAARQGVT 155
Query 104 ATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNN 163
A + D +Q+ I+ TGD Q S+ + ++V Q V +VT AVE +
Sbjct 156 ALMSIDPDHAREDVQRSIDASTGDQKNQLSVLSPLIVNKAQETKVGTKVTIEAVAVESLS 215
Query 164 NDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLD 209
++ V ++ A + ++ +RL V M D+G+ K++K+D
Sbjct 216 DNSGVVLVAAKTIPTGPDNAKPPPALFRLSVNMDRDDGQLKMSKVD 261
>gi|183983966|ref|YP_001852257.1| hypothetical protein MMAR_3994 [Mycobacterium marinum M]
gi|183177292|gb|ACC42402.1| conserved hypothetical alanine-rich protein [Mycobacterium marinum
M]
Length=274
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/182 (27%), Positives = 84/182 (47%), Gaps = 7/182 (3%)
Query 35 EDACPEQALVER----RPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIARE 90
ED P + L R + +R+ R +V A LL + G G + YF Q +Q R
Sbjct 94 EDEEPNKPLSWRDRAVKWARIARLSIVVKVAALLIVFGFAGLSAYFVWNHSQVTQRQERA 153
Query 91 DLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHV 150
+ A + AK V + D +Q++I+ TG+F + + + + + V
Sbjct 154 E-AFTDGAKTGVVNMTSLDFNKAKEDVQRVIDSSTGEFKEEFQSRAADFTKVVEQSKVVT 212
Query 151 QVTDMRAAVERNNNDGSVDVLVALRVKVSN-TDSDAHEVGYRLRVRMALDEGRYKIAKLD 209
+ T AAVE +V VL++ V+N D +RLRV + ++G+YK++K++
Sbjct 213 EGTVHAAAVESMEGHTAV-VLISATSHVTNGGDGKQEPRIWRLRVTVTEEDGQYKMSKVE 271
Query 210 QV 211
V
Sbjct 272 FV 273
>gi|41409710|ref|NP_962546.1| hypothetical protein MAP3612 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464257|ref|YP_884127.1| hypothetical protein MAV_5007 [Mycobacterium avium 104]
gi|254777446|ref|ZP_05218962.1| hypothetical protein MaviaA2_22646 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41398542|gb|AAS06162.1| hypothetical protein MAP_3612 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165544|gb|ABK66441.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336460081|gb|EGO38990.1| hypothetical protein MAPs_44630 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=184
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/178 (29%), Positives = 79/178 (45%), Gaps = 11/178 (6%)
Query 40 EQALVERRPSRLRRGWLVGIAAT----LLALAGGLGAAGYFALRSHQESQSIAREDLAAI 95
E+ L+ RP R RGWL+ +A T L+ A L A L SH+ + A +D +
Sbjct 11 ERPLLVARPVRPPRGWLLPLAGTAAALLMVTAVTLCA---LMLVSHESRERAASKDREVL 67
Query 96 EAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTS-MLVEAYQAASVHVQVTD 154
+ + D + + +I+ TGDF Q + +L++ +A V D
Sbjct 68 SYVSGFMTQFTSIDPFHANDYVNRILAQATGDFAKQYEKNANEILLQVARAEPATGTVLD 127
Query 155 MRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEG-RYKIAKLDQV 211
A +ER N+DGS +V+VA + + D A EG ++KI+ L QV
Sbjct 128 --AGLERWNDDGSANVMVATAITTKSPDEKQVLENTNRWAATATQEGNQWKISSLQQV 183
>gi|118619078|ref|YP_907410.1| hypothetical protein MUL_3858 [Mycobacterium ulcerans Agy99]
gi|118571188|gb|ABL05939.1| conserved hypothetical alanine-rich protein [Mycobacterium ulcerans
Agy99]
Length=269
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/182 (27%), Positives = 85/182 (47%), Gaps = 7/182 (3%)
Query 35 EDACPEQALVER----RPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIARE 90
ED P + L R + +R+ R +V A LL + G G + YF Q +Q R
Sbjct 89 EDEEPNKPLSWRDRAVKWARIARLSIVVKVAALLIVFGFAGLSAYFVWNHGQVTQRQERA 148
Query 91 DLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHV 150
+ A + AK V + D +Q++I+ TG+F + + + + + V
Sbjct 149 E-AFTDGAKTGVVNMISLDFNRAKEDVQRVIDSSTGEFKEEFHSRAADFTKVVEQSKVVT 207
Query 151 QVTDMRAAVERNNNDGSVDVLVALRVKVSN-TDSDAHEVGYRLRVRMALDEGRYKIAKLD 209
+ T AAVE +V VL++ +V+N D +RLRV + ++G+YK++K++
Sbjct 208 EGTVHAAAVESMEGHTAV-VLISATSRVTNGGDGKQEPRIWRLRVTVTEEDGQYKMSKVE 266
Query 210 QV 211
V
Sbjct 267 FV 268
>gi|120405086|ref|YP_954915.1| hypothetical protein Mvan_4132 [Mycobacterium vanbaalenii PYR-1]
gi|119957904|gb|ABM14909.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=300
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/142 (29%), Positives = 73/142 (52%), Gaps = 3/142 (2%)
Query 71 GAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGA 130
GA+GY + +H+ ++ + +++ AA+ V + D +Q+II+ TG F
Sbjct 160 GASGYM-VWTHRGAEKLRQQNAEYAAAARQSVVTLMSLDFNKAEEDVQRIIDNSTGQFKT 218
Query 131 QASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEV-G 189
+ V+ Q + V +V+ AVE ++D S +VLVA +V+NT E
Sbjct 219 DFESQAADFVKVAQDSKVVTEVSVNSTAVESMSDD-SAEVLVAASSRVTNTAGANQEPRT 277
Query 190 YRLRVRMALDEGRYKIAKLDQV 211
+RL V + ++G+ K+AK++ V
Sbjct 278 WRLSVSLKREDGQIKMAKVEFV 299
>gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
gi|342132079|gb|EGT85320.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
Length=291
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query 23 ADSAESD---AGELGEDACPEQALVERRPSRLRRGWLVGI-AATLLALAGGLGAAGYFAL 78
AD AE++ + E EDA E R W V AA ++ + + A+GY
Sbjct 99 ADEAETEDEVSDETPEDAESEAKPARSRRRLRLPSWPVAWKAAVIVLICAFVAASGYMMW 158
Query 79 RSHQESQSIAREDLAA--IEAAKDCVAATQAPDAGAMSASMQKIIECGTG----DFGAQA 132
HQ ++ R+ AA I A+ V + D +Q++I+ TG DF A+A
Sbjct 159 NRHQVNE---RKQHAANFIAGARQGVVNLTSMDFNKAKEDVQRVIDSSTGQFHDDFQARA 215
Query 133 SLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEV-GYR 191
+T+++ + + V Q T AAV+ N D ++ VLVA ++N E +R
Sbjct 216 KDFTTVV----EQSKVVTQGTVNAAAVQSINGDAAL-VLVAATSHITNAAGAKDEPRNWR 270
Query 192 LRVRMALDEGRYKIAKLDQV 211
L+V + D G+YK++ ++ +
Sbjct 271 LKVTVKNDGGQYKMSNVEFI 290
>gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395199|gb|AAS03068.1| hypothetical protein MAP_0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461113|gb|EGO39991.1| hypothetical protein MAPs_33170 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=295
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/175 (30%), Positives = 85/175 (49%), Gaps = 19/175 (10%)
Query 47 RPSRLR-RGWLVGIAATLLAL-AGGLGAAGYFALRSHQES---QSIAREDLAAIEAAKDC 101
R RLR W V A ++AL + A+GY HQ S Q IA + AA+
Sbjct 129 RSRRLRLPSWSVAWKAAVIALICAFVAASGYMMWERHQTSERNQRIAN----FLAAARQG 184
Query 102 VAATQAPDAGAMSASMQKIIECGTG----DFGAQASLYTSMLVEAYQAASVHVQVTDMRA 157
V + D +Q++I+ TG DF +A +T+++ + + V Q T A
Sbjct 185 VVNMTSLDFNKAKEDVQRVIDSSTGQFRDDFQQRAKDFTTVV----EQSKVVTQGTVNAA 240
Query 158 AVERNNNDGSVDVLVALRVKVSNTDSDAHEV-GYRLRVRMALDEGRYKIAKLDQV 211
AV+ + + ++ VLVA +++N E +RL+V + + G+YK++KL+ V
Sbjct 241 AVQSIDGNSAL-VLVAATSRITNAAGAKDEPRNWRLKVTVTDEGGQYKMSKLEFV 294
>gi|296169587|ref|ZP_06851207.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895853|gb|EFG75548.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=199
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/154 (30%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query 57 VGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSAS 116
+G A L+ +A LGA+GY ++ H+ + + + + AA+ V + DAG
Sbjct 47 LGAAVVLMCIA--LGASGYV-VQYHRTAVAQRQRAAEFVAAARQDVVFLMSIDAGRARDD 103
Query 117 MQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRV 176
+Q+II+ TG A L LV+A + + V +V D++A + D S VLVA +
Sbjct 104 VQRIIDDATGPLKAGLLLEAEDLVKAVEQSRVSTKV-DVKAVAVESMTDDSATVLVAAKA 162
Query 177 KVSNTD-SDAHEVGYRLRVRMALDEGRYKIAKLD 209
+V N D S +R+ + D R+K+++ D
Sbjct 163 EVVNPDKSKPPPRSWRVIATIQRDGDRFKLSRAD 196
>gi|145221297|ref|YP_001131975.1| hypothetical protein Mflv_0702 [Mycobacterium gilvum PYR-GCK]
gi|315441815|ref|YP_004074694.1| hypothetical protein Mspyr1_01260 [Mycobacterium sp. Spyr1]
gi|145213783|gb|ABP43187.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260118|gb|ADT96859.1| hypothetical protein Mspyr1_01260 [Mycobacterium sp. Spyr1]
Length=309
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (26%), Positives = 88/211 (42%), Gaps = 10/211 (4%)
Query 9 SDAGADQTGPQVKAADSAESDA-GELGEDACPEQA-LVERRPSRLRRGWLVGIAATLLAL 66
S+A D++ P+V ++ E A E+ D PE +V RP+ RG L+ A +
Sbjct 94 SEASEDESTPEVSEPEATEPQAEAEVEADPEPEPVVMVPHRPAG--RGVLIATAVASVVF 151
Query 67 AGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTG 126
G G A A + + +++ + L A D + + MS+ ++ TG
Sbjct 152 VGASGFAAAMA-QPYLSERALVQTKLTIARTATDAITTLWSYTPEDMSSLAERASAYLTG 210
Query 127 DFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVAL----RVKVSNTD 182
DF A+ Y +VEA + A V M AAVE + AL V S
Sbjct 211 DFAAEYRRYIDAIVEANKQAQVTNTTQVMGAAVESVSPPSIPTEATALVYTNSVATSPVT 270
Query 183 SDAHEVGY-RLRVRMALDEGRYKIAKLDQVT 212
+ + Y R+ M D G ++I ++ +T
Sbjct 271 KNIPSLRYLSYRLTMNRDGGEWRITRMSTIT 301
>gi|126432888|ref|YP_001068579.1| hypothetical protein Mjls_0275 [Mycobacterium sp. JLS]
gi|126232688|gb|ABN96088.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=209
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/172 (29%), Positives = 77/172 (45%), Gaps = 19/172 (11%)
Query 50 RLRR-GWLVGIAA-TLLALAGGLGAAGYFALRS----HQESQSIAREDLAAIEAAKDCVA 103
RLRR GW +A + A L A+GY H++ QS A EAA +A
Sbjct 46 RLRRPGWSTVVAVLAVFVTAASLAASGYVTWHHREAMHRQQQS------AEFEAAARQIA 99
Query 104 AT-QAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMR---AAV 159
T + DA S+++I++ TG F + + V+ Q V VTD++ AAV
Sbjct 100 ITLMSIDAAKAEESVKQILDSSTGQFHEEFKSASEDFVKLTQDGKV---VTDVKVKAAAV 156
Query 160 ERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQV 211
E D + ++ + +D +RL V + D GR K++K++ V
Sbjct 157 ESMTEDSATVLVTTTSTVTNAAGADKQPRAWRLSVDIVRDAGRLKMSKMEFV 208
>gi|108797264|ref|YP_637461.1| hypothetical protein Mmcs_0284 [Mycobacterium sp. MCS]
gi|119866349|ref|YP_936301.1| hypothetical protein Mkms_0294 [Mycobacterium sp. KMS]
gi|108767683|gb|ABG06405.1| putative membrane protein [Mycobacterium sp. MCS]
gi|119692438|gb|ABL89511.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=209
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/172 (29%), Positives = 77/172 (45%), Gaps = 19/172 (11%)
Query 50 RLRR-GWLVGIAA-TLLALAGGLGAAGYFALRS----HQESQSIAREDLAAIEAAKDCVA 103
RLRR GW +A + A L A+GY H++ QS A EAA +A
Sbjct 46 RLRRPGWSTVVAVLAVFVTAASLAASGYVTWHHREAMHRQQQS------AEFEAAARQIA 99
Query 104 AT-QAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMR---AAV 159
T + DA S+++I++ TG F + + V+ Q V VTD++ AAV
Sbjct 100 ITLMSIDAAKAEESVKQILDSSTGQFHEEFKSASEDFVKLTQDGKV---VTDVKVKAAAV 156
Query 160 ERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQV 211
E D + ++ + +D +RL V + D GR K++K++ V
Sbjct 157 ESMTEDSATVLVTTTSTVTNAAGADKQPRAWRLSVDIVRDVGRLKMSKMEFV 208
>gi|254821394|ref|ZP_05226395.1| hypothetical protein MintA_15764 [Mycobacterium intracellulare
ATCC 13950]
Length=184
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/176 (28%), Positives = 78/176 (45%), Gaps = 7/176 (3%)
Query 40 EQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALR--SHQESQSIAREDLAAIEA 97
E+ L+ P R+GWLV +AAT+ A+ + A AL SH+ A D +
Sbjct 11 ERPLLVEHPVPPRQGWLVPLAATVAAVL-MVAAISVCALMWGSHESRARAASRDREVLTY 69
Query 98 AKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTS-MLVEAYQAASVHVQVTDMR 156
+ + D + + +I+ TGDF Q + +L++ +A V D
Sbjct 70 VTGFMTQFTSIDPFHANDYVNRILAQATGDFAKQYEKNANEILLQVARAEPATGSVLD-- 127
Query 157 AAVERNNNDGSVDVLVALRVKVSNTD-SDAHEVGYRLRVRMALDEGRYKIAKLDQV 211
A +ER N+DGS +V+VA + + D E R + ++KI+ L QV
Sbjct 128 AGLERWNDDGSANVMVATAITTKSPDEKQVLENANRWAATATQEGNQWKISNLQQV 183
>gi|118464562|ref|YP_880216.1| hypothetical protein MAV_0956 [Mycobacterium avium 104]
gi|118165849|gb|ABK66746.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=247
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/154 (26%), Positives = 75/154 (49%), Gaps = 3/154 (1%)
Query 57 VGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSAS 116
+ A +L + LGA+GY + + + D A A +D V + +A
Sbjct 93 IAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVV-LLMSLNAQHARED 151
Query 117 MQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRV 176
+Q++I+ TGD Q + ++++ + + + T VE ++D +V VLVA +
Sbjct 152 IQRVIDACTGDLKKQLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAV-VLVAAKT 210
Query 177 KVSNTD-SDAHEVGYRLRVRMALDEGRYKIAKLD 209
V+N D ++ V +R+ V + D G+ K++K+D
Sbjct 211 DVTNADNTNRPPVVWRISVGLTRDGGQLKMSKVD 244
>gi|41406866|ref|NP_959702.1| hypothetical protein MAP0768c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395216|gb|AAS03085.1| hypothetical protein MAP_0768c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=298
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/154 (26%), Positives = 75/154 (49%), Gaps = 3/154 (1%)
Query 57 VGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSAS 116
+ A +L + LGA+GY + + + D A A +D V + +A
Sbjct 144 IAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQD-VVLLMSLNAQHARED 202
Query 117 MQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRV 176
+Q++I+ TGD Q + ++++ + + + T VE ++D +V VLVA +
Sbjct 203 IQRVIDACTGDLKKQLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAV-VLVAAKT 261
Query 177 KVSNTD-SDAHEVGYRLRVRMALDEGRYKIAKLD 209
V+N D ++ V +R+ V + D G+ K++K+D
Sbjct 262 DVTNADNTNRPPVVWRISVGLTRDGGQLKMSKVD 295
>gi|336461213|gb|EGO40089.1| hypothetical protein MAPs_32980 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=253
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/200 (26%), Positives = 91/200 (46%), Gaps = 24/200 (12%)
Query 30 AGELGEDACPEQALVERRPSRLRRGWL-------------------VGIAATLLALAGGL 70
AG G+DA E VE+R ++ RG L + A +L + L
Sbjct 55 AGTSGDDAAAED--VEQRATKSARGRLRIPRRPGRPRWLRLPGRRAIAAGAGILLASASL 112
Query 71 GAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGA 130
GA+GY + + + D A A +D V + +A +Q++I+ TGD
Sbjct 113 GASGYMVWQHRVAAHNRQLSDEYAAAARQDVV-LLMSLNAQHAREDIQRVIDACTGDLKK 171
Query 131 QASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTD-SDAHEVG 189
Q + ++++ + + + T VE ++D +V VLVA + V+N D ++ V
Sbjct 172 QLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAV-VLVAAKTDVTNADNTNRPPVV 230
Query 190 YRLRVRMALDEGRYKIAKLD 209
+R+ V + D G+ K++K+D
Sbjct 231 WRISVGLTRDGGQLKMSKVD 250
>gi|254773845|ref|ZP_05215361.1| hypothetical protein MaviaA2_04092 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=246
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/154 (26%), Positives = 75/154 (49%), Gaps = 3/154 (1%)
Query 57 VGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSAS 116
+ A +L + LGA+GY + + + D A A +D V + +A
Sbjct 92 IAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVV-LLMSLNAQHARED 150
Query 117 MQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRV 176
+Q++I+ TGD Q + ++++ + + + T VE ++D +V VLVA +
Sbjct 151 IQRVIDACTGDLKKQLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAV-VLVAAKT 209
Query 177 KVSNTD-SDAHEVGYRLRVRMALDEGRYKIAKLD 209
V+N D ++ V +R+ V + D G+ K++K+D
Sbjct 210 DVTNADNTNRPPVVWRISVGLTRDGGQLKMSKVD 243
Lambda K H
0.313 0.126 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 251148961304
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40