BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0199
Length=219
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607340|ref|NP_214713.1| hypothetical protein Rv0199 [Mycoba... 444 5e-123
gi|340625236|ref|YP_004743688.1| hypothetical protein MCAN_02051... 423 9e-117
gi|15839579|ref|NP_334616.1| hypothetical protein MT0209 [Mycoba... 369 2e-100
gi|289445730|ref|ZP_06435474.1| conserved membrane protein [Myco... 341 5e-92
gi|296167416|ref|ZP_06849817.1| conserved hypothetical protein [... 330 8e-89
gi|240172085|ref|ZP_04750744.1| hypothetical protein MkanA1_2240... 321 4e-86
gi|118465161|ref|YP_884097.1| hypothetical protein MAV_4976 [Myc... 318 4e-85
gi|183980470|ref|YP_001848761.1| hypothetical protein MMAR_0439 ... 313 2e-83
gi|118616818|ref|YP_905150.1| hypothetical protein MUL_1089 [Myc... 312 2e-83
gi|342859345|ref|ZP_08715999.1| hypothetical protein MCOL_10713 ... 306 1e-81
gi|254819017|ref|ZP_05224018.1| hypothetical protein MintA_03776... 305 2e-81
gi|15828410|ref|NP_302673.1| hypothetical protein ML2614 [Mycoba... 290 1e-76
gi|118468337|ref|YP_884650.1| hypothetical protein MSMEG_0235 [M... 218 4e-55
gi|333988802|ref|YP_004521416.1| hypothetical protein JDM601_016... 214 6e-54
gi|126432761|ref|YP_001068452.1| hypothetical protein Mjls_0148 ... 197 8e-49
gi|108797138|ref|YP_637335.1| hypothetical protein Mmcs_0158 [My... 197 1e-48
gi|120401212|ref|YP_951041.1| hypothetical protein Mvan_0185 [My... 184 8e-45
gi|145221074|ref|YP_001131752.1| hypothetical protein Mflv_0470 ... 172 2e-41
gi|315441955|ref|YP_004074834.1| hypothetical protein Mspyr1_028... 166 2e-39
gi|169631609|ref|YP_001705258.1| hypothetical protein MAB_4535c ... 121 8e-26
gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245... 61.2 1e-07
gi|315443159|ref|YP_004076038.1| protein conserved in bacteria (... 55.8 5e-06
gi|145222695|ref|YP_001133373.1| hypothetical protein Mflv_2107 ... 55.1 7e-06
gi|296169604|ref|ZP_06851224.1| conserved hypothetical protein [... 54.7 9e-06
gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 ... 54.3 1e-05
gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Myco... 53.9 1e-05
gi|118464140|ref|YP_880199.1| hypothetical protein MAV_0938 [Myc... 53.9 2e-05
gi|333992103|ref|YP_004524717.1| hypothetical protein JDM601_346... 50.8 1e-04
gi|108801052|ref|YP_641249.1| hypothetical protein Mmcs_4088 [My... 50.1 2e-04
gi|118472928|ref|YP_884765.1| hypothetical protein MSMEG_0352 [M... 49.7 3e-04
gi|126436889|ref|YP_001072580.1| hypothetical protein Mjls_4318 ... 49.7 3e-04
gi|118467240|ref|YP_881730.1| hypothetical protein MAV_2538 [Myc... 48.1 8e-04
gi|183984145|ref|YP_001852436.1| anchored-membrane serine/threon... 47.8 0.001
gi|118619584|ref|YP_907916.1| anchored-membrane serine/threonine... 47.4 0.001
gi|54022574|ref|YP_116816.1| hypothetical protein nfa6070 [Nocar... 47.4 0.002
gi|120405550|ref|YP_955379.1| hypothetical protein Mvan_4598 [My... 47.4 0.002
gi|169628099|ref|YP_001701748.1| hypothetical protein MAB_1004c ... 47.4 0.002
gi|342861410|ref|ZP_08718058.1| hypothetical protein MCOL_21101 ... 47.0 0.002
gi|254819944|ref|ZP_05224945.1| hypothetical protein MintA_08466... 46.2 0.003
gi|344219195|gb|AEM99825.1| hypothetical protein MTCTRI2_1402 [M... 46.2 0.004
gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 ... 45.4 0.006
gi|118473172|ref|YP_889454.1| hypothetical protein MSMEG_5208 [M... 45.4 0.006
gi|333992917|ref|YP_004525531.1| hypothetical protein JDM601_427... 45.1 0.008
gi|54022510|ref|YP_116752.1| hypothetical protein nfa5430 [Nocar... 44.7 0.009
gi|31792559|ref|NP_855052.1| hypothetical protein Mb1398c [Mycob... 44.7 0.010
gi|339294897|gb|AEJ47008.1| MCE associated membrane protein [Myc... 44.7 0.011
gi|108800620|ref|YP_640817.1| hypothetical protein Mmcs_3654 [My... 43.9 0.017
gi|343927143|ref|ZP_08766624.1| hypothetical protein GOALK_084_0... 43.5 0.021
gi|312138216|ref|YP_004005552.1| mce associated protein mas2a [R... 43.5 0.025
gi|289758082|ref|ZP_06517460.1| mce associated membrane protein ... 43.1 0.027
>gi|15607340|ref|NP_214713.1| hypothetical protein Rv0199 [Mycobacterium tuberculosis H37Rv]
gi|31791377|ref|NP_853870.1| hypothetical protein Mb0205 [Mycobacterium bovis AF2122/97]
gi|121636111|ref|YP_976334.1| hypothetical protein BCG_0236 [Mycobacterium bovis BCG str. Pasteur
1173P2]
74 more sequence titles
Length=219
Score = 444 bits (1142), Expect = 5e-123, Method: Compositional matrix adjust.
Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)
Query 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG
Sbjct 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA
Sbjct 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
Query 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV 180
VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV
Sbjct 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV 180
Query 181 ATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
ATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR
Sbjct 181 ATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
>gi|340625236|ref|YP_004743688.1| hypothetical protein MCAN_02051 [Mycobacterium canettii CIPT
140010059]
gi|340003426|emb|CCC42546.1| putative conserved membrane protein [Mycobacterium canettii CIPT
140010059]
Length=219
Score = 423 bits (1088), Expect = 9e-117, Method: Compositional matrix adjust.
Identities = 208/219 (95%), Positives = 214/219 (98%), Gaps = 0/219 (0%)
Query 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
MPDGEQ+QPPAQED++DDSRPDA E+A AE +SSAGPMFSTYGIASTLLGVLSVAAVVLG
Sbjct 1 MPDGEQTQPPAQEDSDDDSRPDAVESAPAEAESSAGPMFSTYGIASTLLGVLSVAAVVLG 60
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
AMIWSAHRDDSGERTYLTRVML AAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA
Sbjct 61 AMIWSAHRDDSGERTYLTRVMLAAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
Query 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV 180
VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVV TKLPPFATRTDSVLLV
Sbjct 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVPTKLPPFATRTDSVLLV 180
Query 181 ATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
ATSVSENAGA+PQTVHWNLRLDVSDVDGKLMISRLESIR
Sbjct 181 ATSVSENAGAQPQTVHWNLRLDVSDVDGKLMISRLESIR 219
>gi|15839579|ref|NP_334616.1| hypothetical protein MT0209 [Mycobacterium tuberculosis CDC1551]
gi|13879693|gb|AAK44430.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=182
Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%)
Query 38 MFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNAD 97
MFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNAD
Sbjct 1 MFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNAD 60
Query 98 NIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSG 157
NIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSG
Sbjct 61 NIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSG 120
Query 158 AARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLES 217
AARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLES
Sbjct 121 AARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLES 180
Query 218 IR 219
IR
Sbjct 181 IR 182
>gi|289445730|ref|ZP_06435474.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289418688|gb|EFD15889.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=169
Score = 341 bits (874), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/169 (99%), Positives = 169/169 (100%), Gaps = 0/169 (0%)
Query 51 VLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGT 110
+LSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGT
Sbjct 1 MLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGT 60
Query 111 VGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPF 170
VGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPF
Sbjct 61 VGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPF 120
Query 171 ATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
ATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR
Sbjct 121 ATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 169
>gi|296167416|ref|ZP_06849817.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897225|gb|EFG76830.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=218
Score = 330 bits (846), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 159/219 (73%), Positives = 187/219 (86%), Gaps = 1/219 (0%)
Query 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
M DGE+++P QE E D+ D EA EP ++ GPMFS YGIAST+LGVLSVAAVV G
Sbjct 1 MSDGERTEPANQETEEADA-ADPGEAPGDEPGAAGGPMFSPYGIASTVLGVLSVAAVVFG 59
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
+WS HRDD+ ER YL+RVM TAA+WT VLINMN+ N+DASLQRLHDGTVG+LNTDFDA
Sbjct 60 FFLWSGHRDDTAERRYLSRVMQTAADWTGVLINMNSGNVDASLQRLHDGTVGELNTDFDA 119
Query 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV 180
+QPYRQVVEKL++ S+GRI+AVA++ VHR+LDTQ G +RPVVTTKLPPFA+R DSV+LV
Sbjct 120 AMQPYRQVVEKLQSKSAGRIDAVAVEAVHRDLDTQPGVSRPVVTTKLPPFASRMDSVMLV 179
Query 181 ATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
ATSVSENAGAKPQTVHWNLRLDV++V+GKLMIS LESIR
Sbjct 180 ATSVSENAGAKPQTVHWNLRLDVANVEGKLMISGLESIR 218
>gi|240172085|ref|ZP_04750744.1| hypothetical protein MkanA1_22405 [Mycobacterium kansasii ATCC
12478]
Length=212
Score = 321 bits (823), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/190 (83%), Positives = 172/190 (91%), Gaps = 0/190 (0%)
Query 30 EPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTA 89
EP+S+ MFS YGIAST+LGVLSVAAVVLG +IWSAHRD+ ER YL+RVM AAEWT
Sbjct 23 EPESTQAAMFSHYGIASTVLGVLSVAAVVLGTLIWSAHRDEVAERVYLSRVMRAAAEWTD 82
Query 90 VLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVH 149
VLINMNA N+D+SLQRLHDGTVGQLNTDFDA VQPYRQVVEKL+T S+GRIEAVAI+TVH
Sbjct 83 VLINMNAGNVDSSLQRLHDGTVGQLNTDFDAAVQPYRQVVEKLQTRSNGRIEAVAIETVH 142
Query 150 RELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGK 209
+LDTQ G+ARPVVTTKLPPFATRTDSVLLVATSV+ENAG KPQTVHWNLR+DVS+VDGK
Sbjct 143 HDLDTQPGSARPVVTTKLPPFATRTDSVLLVATSVAENAGVKPQTVHWNLRIDVSEVDGK 202
Query 210 LMISRLESIR 219
LMIS LESIR
Sbjct 203 LMISGLESIR 212
>gi|118465161|ref|YP_884097.1| hypothetical protein MAV_4976 [Mycobacterium avium 104]
gi|254777415|ref|ZP_05218931.1| hypothetical protein MaviaA2_22491 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166448|gb|ABK67345.1| probable conserved membrane protein [Mycobacterium avium 104]
Length=209
Score = 318 bits (814), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/219 (73%), Positives = 184/219 (85%), Gaps = 10/219 (4%)
Query 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
M DGE+++PPA++D++ D P+AA+ G +FS YG+AST+LGVLSVAAVVL
Sbjct 1 MSDGERTEPPAEQDSDADEPPEAAD----------GRIFSHYGVASTVLGVLSVAAVVLA 50
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
A+IWS HRD ER+YL+RVM TAA+W VLINMN+ N+DASLQRLHDGTVG+LNTDFDA
Sbjct 51 ALIWSDHRDQVAERSYLSRVMRTAADWANVLINMNSGNVDASLQRLHDGTVGELNTDFDA 110
Query 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV 180
VQPYR VVEKL++ SSGR++AVAI+TVH +LD Q GAARP VTTKLPPFATRTDSVLLV
Sbjct 111 AVQPYRAVVEKLQSKSSGRVDAVAIETVHHDLDAQPGAARPPVTTKLPPFATRTDSVLLV 170
Query 181 ATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
ATSVSEN GAKPQTVHW+LRLDVSDVDGKLMIS L SIR
Sbjct 171 ATSVSENVGAKPQTVHWSLRLDVSDVDGKLMISGLSSIR 209
>gi|183980470|ref|YP_001848761.1| hypothetical protein MMAR_0439 [Mycobacterium marinum M]
gi|183173796|gb|ACC38906.1| conserved membrane protein [Mycobacterium marinum M]
Length=215
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/201 (77%), Positives = 175/201 (88%), Gaps = 2/201 (0%)
Query 21 PDAAEAA--AAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLT 78
PD+A++A A E +SS MFS+YG+ S LGVLSVAAVVLG +IW HRD+ ER YLT
Sbjct 15 PDSADSAPAATEGESSGEGMFSSYGVGSAFLGVLSVAAVVLGVLIWIGHRDEISERVYLT 74
Query 79 RVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSG 138
RVM AAEWT VLINMNA NID+SLQ+LHDGTVGQLNTDFDA VQPYRQVVEKL+THSSG
Sbjct 75 RVMQAAAEWTDVLINMNAGNIDSSLQQLHDGTVGQLNTDFDAAVQPYRQVVEKLQTHSSG 134
Query 139 RIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWN 198
RIEAVAI+TVHR+LDT+ G ARPVVTTKLPPFA+RTDSVLLVATSV+ENAG KPQTVHW+
Sbjct 135 RIEAVAIETVHRDLDTRPGTARPVVTTKLPPFASRTDSVLLVATSVAENAGVKPQTVHWS 194
Query 199 LRLDVSDVDGKLMISRLESIR 219
LR++VSDVDGKL++S L SIR
Sbjct 195 LRVEVSDVDGKLLVSGLASIR 215
>gi|118616818|ref|YP_905150.1| hypothetical protein MUL_1089 [Mycobacterium ulcerans Agy99]
gi|118568928|gb|ABL03679.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=215
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/201 (77%), Positives = 175/201 (88%), Gaps = 2/201 (0%)
Query 21 PDAAEAA--AAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLT 78
PD+A++A A E +SS MFS+YG+ S LGVLSVAAVVLG +IW HRD+ ER YLT
Sbjct 15 PDSADSAPVATEGESSGEGMFSSYGVGSAFLGVLSVAAVVLGVLIWIGHRDEISERVYLT 74
Query 79 RVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSG 138
RVM AAEWT VLINMNA NID+SLQ+LHDGTVGQLNTDFDA VQPYRQVVEKL+THSSG
Sbjct 75 RVMQAAAEWTDVLINMNAGNIDSSLQQLHDGTVGQLNTDFDAAVQPYRQVVEKLQTHSSG 134
Query 139 RIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWN 198
RIEAVAI+TVHR+LDT+ G ARPVVTTKLPPFA+RTDSVLLVATSV+ENAG KPQTVHW+
Sbjct 135 RIEAVAIETVHRDLDTRPGTARPVVTTKLPPFASRTDSVLLVATSVAENAGVKPQTVHWS 194
Query 199 LRLDVSDVDGKLMISRLESIR 219
LR++VSDVDGKL++S L SIR
Sbjct 195 LRVEVSDVDGKLLVSGLASIR 215
>gi|342859345|ref|ZP_08715999.1| hypothetical protein MCOL_10713 [Mycobacterium colombiense CECT
3035]
gi|342133586|gb|EGT86789.1| hypothetical protein MCOL_10713 [Mycobacterium colombiense CECT
3035]
Length=227
Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/227 (67%), Positives = 184/227 (82%), Gaps = 8/227 (3%)
Query 1 MPDGEQSQPPAQEDA--------EDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVL 52
M +GE+++PPA++D+ D++ D A+ + +S +G +FS YGIAS +LGVL
Sbjct 1 MSEGERTEPPAEQDSVHVAPDHDSSDAKNDDADDHGEDVESESGAVFSPYGIASAVLGVL 60
Query 53 SVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVG 112
SVAAVVLG +IWS HRD ER YL+R M TAA+W VLINMN+ N+DASLQRLHDGTVG
Sbjct 61 SVAAVVLGFIIWSDHRDQVAERGYLSRAMQTAADWANVLINMNSGNVDASLQRLHDGTVG 120
Query 113 QLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFAT 172
+LNTDFDA VQPY+ VVEKL++ S+GRIEAVA++TVH +LDTQ G +RPVVTTKLPPFA+
Sbjct 121 ELNTDFDAAVQPYKAVVEKLQSKSAGRIEAVAVETVHHDLDTQPGVSRPVVTTKLPPFAS 180
Query 173 RTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
RTDSV+++ATSVSEN GAKPQTVHWNLRLDVS+VDGK MIS L SIR
Sbjct 181 RTDSVMVIATSVSENVGAKPQTVHWNLRLDVSNVDGKQMISGLGSIR 227
>gi|254819017|ref|ZP_05224018.1| hypothetical protein MintA_03776 [Mycobacterium intracellulare
ATCC 13950]
Length=223
Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/223 (71%), Positives = 177/223 (80%), Gaps = 4/223 (1%)
Query 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
M +G +++PPA+ED D A A A+ +FS YG+AST+LGVLSVAAVVLG
Sbjct 1 MSEGARTEPPAEEDVVDAEEGGHATADDADDGEPGDGVFSHYGVASTVLGVLSVAAVVLG 60
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
+IWS HRD ER YL+RVM TAA WT VLINMN+ N+DASLQRLHDGTVG+LNT FDA
Sbjct 61 VIIWSGHRDQVAERGYLSRVMQTAAGWTNVLINMNSGNVDASLQRLHDGTVGELNTYFDA 120
Query 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARP----VVTTKLPPFATRTDS 176
VQPYR VVEKL++ S+GRI+AVAI+TVH ELD Q GA RP VTTKLPPFA+RTDS
Sbjct 121 AVQPYRAVVEKLQSKSAGRIDAVAIETVHHELDAQPGADRPPGSESVTTKLPPFASRTDS 180
Query 177 VLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
VLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMIS L SIR
Sbjct 181 VLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISGLSSIR 223
>gi|15828410|ref|NP_302673.1| hypothetical protein ML2614 [Mycobacterium leprae TN]
gi|221230887|ref|YP_002504303.1| hypothetical protein MLBr_02614 [Mycobacterium leprae Br4923]
gi|2104601|emb|CAB08810.1| unknown [Mycobacterium leprae]
gi|13093840|emb|CAC32146.1| conserved membrane protein [Mycobacterium leprae]
gi|219933994|emb|CAR72714.1| conserved membrane protein [Mycobacterium leprae Br4923]
Length=224
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/219 (68%), Positives = 169/219 (78%), Gaps = 7/219 (3%)
Query 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
MPD EQ++ P ++ A A ++P S G +FS YGIAST+L VLS AAVV G
Sbjct 13 MPDEEQTELPVHKEF-------AGIADYSDPGLSDGSVFSQYGIASTVLAVLSAAAVVFG 65
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
+IW AH D+S ER YLT VM TA +WT VLINMN N+DASLQRLH GTVG+LNTDFDA
Sbjct 66 VVIWRAHHDNSAERAYLTHVMQTAFDWTGVLINMNTSNVDASLQRLHAGTVGELNTDFDA 125
Query 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV 180
VQPYR+VVEKL+T S G+IEAVAI++VH +LDTQ G A PVVTTKL P A RTDSV+LV
Sbjct 126 AVQPYRKVVEKLQTQSRGQIEAVAIESVHHDLDTQPGVAHPVVTTKLLPPAARTDSVMLV 185
Query 181 ATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR 219
ATSVSEN G KP TVHW+LRLDVSDVDGKLMIS LESIR
Sbjct 186 ATSVSENVGGKPTTVHWSLRLDVSDVDGKLMISHLESIR 224
>gi|118468337|ref|YP_884650.1| hypothetical protein MSMEG_0235 [Mycobacterium smegmatis str.
MC2 155]
gi|118169624|gb|ABK70520.1| probable conserved membrane protein [Mycobacterium smegmatis
str. MC2 155]
Length=206
Score = 218 bits (555), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/205 (54%), Positives = 156/205 (77%), Gaps = 6/205 (2%)
Query 21 PDA--AEAAAAEPKS---SAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERT 75
PDA +A EP++ + G +FS+YG+AS +LGV+++AAVVLG MI++AHRD+ ER
Sbjct 2 PDAPSKDAPEREPETDPGATGGIFSSYGVASAVLGVIAIAAVVLGTMIFTAHRDEISERD 61
Query 76 YLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTH 135
Y TRV+ AAEWT VLINM A+ +DA +Q+LH+GTVGQLN DFD+ VQPYR++V++L++
Sbjct 62 YQTRVLQAAAEWTNVLINMTAETVDADMQKLHEGTVGQLNNDFDSAVQPYRELVQRLQSR 121
Query 136 SSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGA-KPQT 194
++G++++VAI++++ G + +L +R D+VL+VATSV+E AG+ KP+T
Sbjct 122 TTGQLDSVAIESLYHPQPGPDGRVQQPERAELTGMVSRIDTVLVVATSVTETAGSDKPRT 181
Query 195 VHWNLRLDVSDVDGKLMISRLESIR 219
V WNLRLDV+DVDG+LMISRLE IR
Sbjct 182 VRWNLRLDVADVDGQLMISRLEPIR 206
>gi|333988802|ref|YP_004521416.1| hypothetical protein JDM601_0162 [Mycobacterium sp. JDM601]
gi|333484770|gb|AEF34162.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=225
Score = 214 bits (545), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/207 (51%), Positives = 142/207 (69%), Gaps = 7/207 (3%)
Query 13 EDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSG 72
E DD +P + A K+ G + S YG+AS LG++++ A+V G + WS HRDD
Sbjct 26 ETPRDDQKPATKKGAPPAAKAPKGGI-SGYGLASAFLGLVAIGALVFGLITWSMHRDDVD 84
Query 73 ERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKL 132
ER Y +RV+ TAA WT+VLIN+NA+N++ + RL D TVG+LN++FDA ++PYR+VV+K+
Sbjct 85 ERAYRSRVLQTAASWTSVLINLNAENVEKGMTRLRDKTVGELNSEFDAALEPYREVVQKI 144
Query 133 RTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKP 192
++ SSGRIEAVAI+ LD P PP RTD V+++ATS++EN G +P
Sbjct 145 QSRSSGRIEAVAIELERHNLDD------PAAGNDQPPSPGRTDPVMVIATSIAENVGGRP 198
Query 193 QTVHWNLRLDVSDVDGKLMISRLESIR 219
QTVHW L LDV+DVDG LMISRL SIR
Sbjct 199 QTVHWALHLDVTDVDGHLMISRLRSIR 225
>gi|126432761|ref|YP_001068452.1| hypothetical protein Mjls_0148 [Mycobacterium sp. JLS]
gi|126232561|gb|ABN95961.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=200
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/205 (56%), Positives = 150/205 (74%), Gaps = 10/205 (4%)
Query 18 DSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYL 77
D R DAAE+A G +F+ +G+AS +L LSVAAVVL MIWS HR+ S ER Y
Sbjct 3 DERADAAESAD-------GRVFTGFGVASAVLAALSVAAVVLAVMIWSGHREASAERAYQ 55
Query 78 TRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSS 137
TRV+ AA+WT VL+NMN D +DAS+QRLH+ T+G LN DFD+ V+PYR++V++L+T +
Sbjct 56 TRVLQAAADWTNVLVNMNKDTVDASMQRLHENTIGDLNADFDSAVEPYRELVQRLQTRTK 115
Query 138 GRIEAVAIDTVHRELDTQSG--AARPVVTTKLPPFATRTDSVLLVATSVSENAGAK-PQT 194
G++++V+I+++H + G A P +L FA+RTD+VL+VATS+S+N G K PQT
Sbjct 116 GQVDSVSIESLHHPVPGPDGGPALAPPPDPQLSAFASRTDTVLVVATSISDNVGNKEPQT 175
Query 195 VHWNLRLDVSDVDGKLMISRLESIR 219
V W LRLDVSDVDGKLMISRLE IR
Sbjct 176 VRWTLRLDVSDVDGKLMISRLEPIR 200
>gi|108797138|ref|YP_637335.1| hypothetical protein Mmcs_0158 [Mycobacterium sp. MCS]
gi|119866223|ref|YP_936175.1| hypothetical protein Mkms_0167 [Mycobacterium sp. KMS]
gi|108767557|gb|ABG06279.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692312|gb|ABL89385.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=204
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/205 (56%), Positives = 151/205 (74%), Gaps = 10/205 (4%)
Query 18 DSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYL 77
D R DAAE+A G + + +G+AS +L LSVAAVVL MIWS HR+ S ER Y
Sbjct 7 DERADAAESAD-------GRVLTGFGVASAVLAALSVAAVVLAVMIWSGHREASAERAYQ 59
Query 78 TRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSS 137
TRV+ AA+WT+VL+NMN D++DAS+QRLH+ T+G LN DFD+ V+PYRQ+V++L+T +
Sbjct 60 TRVLQAAADWTSVLVNMNKDSVDASMQRLHENTIGDLNADFDSAVEPYRQLVQRLQTRTR 119
Query 138 GRIEAVAIDTVHRELDTQSG--AARPVVTTKLPPFATRTDSVLLVATSVSENAGAK-PQT 194
G++++V+I+++H + G A P +L FA+RTD+VL+VATS+S+N G K PQT
Sbjct 120 GQVDSVSIESLHHPVPGPDGGPALAPPPDPQLSAFASRTDTVLVVATSISDNVGNKEPQT 179
Query 195 VHWNLRLDVSDVDGKLMISRLESIR 219
V W LRLDVSDVDGKLMISRLE IR
Sbjct 180 VRWTLRLDVSDVDGKLMISRLEPIR 204
>gi|120401212|ref|YP_951041.1| hypothetical protein Mvan_0185 [Mycobacterium vanbaalenii PYR-1]
gi|119954030|gb|ABM11035.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=198
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/220 (50%), Positives = 152/220 (70%), Gaps = 23/220 (10%)
Query 1 MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLG 60
MPD EQ P + RP EP+ +FS YGIAS +LGV++VAA VL
Sbjct 1 MPDDEQLSDP-------EPRP--------EPRRDG--VFSAYGIASAVLGVVAVAAAVLA 43
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDA 120
++W+ HRD++ E Y T+V+ TAA+WT VLINMN+D +DA + +LHDGTVGQLN DF+
Sbjct 44 LVVWTGHRDEADELRYRTQVLQTAADWTGVLINMNSDTVDADMAKLHDGTVGQLNADFET 103
Query 121 VVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLV 180
V+PYR++V+ LR+ ++G+I++VAI+T+H + P + FA+RTD+V++V
Sbjct 104 AVEPYRKLVQTLRSSTTGQIDSVAIETIH-----HADPGSPPQEEGIEGFASRTDTVMVV 158
Query 181 ATSVSENAGA-KPQTVHWNLRLDVSDVDGKLMISRLESIR 219
ATS+SENAG +P+TV W LRLDV+DVDG+L +SRLE IR
Sbjct 159 ATSLSENAGTDEPRTVRWTLRLDVTDVDGRLAVSRLEPIR 198
>gi|145221074|ref|YP_001131752.1| hypothetical protein Mflv_0470 [Mycobacterium gilvum PYR-GCK]
gi|145213560|gb|ABP42964.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=204
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/158 (52%), Positives = 122/158 (78%), Gaps = 4/158 (2%)
Query 63 IWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVV 122
WS HR D+ E Y T+V+ TAA+WT +LIN+N D I+A + RLHDGTVG+LN DF++ +
Sbjct 50 FWSGHRADTDELRYRTQVLQTAADWTGILINLNKDTIEADMARLHDGTVGRLNADFESSM 109
Query 123 QPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVAT 182
+P+R +V+ L++ ++G++++VAI+T+H + D AA P T L F++RTD+V+++AT
Sbjct 110 EPFRTLVQTLKSSTTGQVDSVAIETIHHD-DPDEPAAPPA--TDLTGFSSRTDTVMVIAT 166
Query 183 SVSENAGAK-PQTVHWNLRLDVSDVDGKLMISRLESIR 219
S+SEN+G + PQTV W LRLDV+DVDG+L +SRLES+R
Sbjct 167 SLSENSGTEAPQTVRWTLRLDVTDVDGELKVSRLESVR 204
>gi|315441955|ref|YP_004074834.1| hypothetical protein Mspyr1_02850 [Mycobacterium sp. Spyr1]
gi|315260258|gb|ADT96999.1| hypothetical protein Mspyr1_02850 [Mycobacterium sp. Spyr1]
Length=201
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 118/158 (75%), Gaps = 4/158 (2%)
Query 63 IWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVV 122
WS HR D+ E Y T+V+ TAA+WT +LIN+N D I+A + RLHDGTVG+LN DF++ +
Sbjct 47 FWSGHRADTDELRYRTQVLQTAADWTGILINLNKDTIEADMARLHDGTVGRLNADFESSM 106
Query 123 QPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVAT 182
+P+R +V+ L++ ++G++++VAI+T+H A T L F++RTD+V+++AT
Sbjct 107 EPFRTLVQTLKSSTTGQVDSVAIETIHH---DDPDAPAAPPATDLTGFSSRTDTVMVIAT 163
Query 183 SVSENAGAK-PQTVHWNLRLDVSDVDGKLMISRLESIR 219
S+SEN+G + PQTV W LRLDV+DVDG+L +SRLES+R
Sbjct 164 SLSENSGTEAPQTVRWTLRLDVTDVDGELKVSRLESVR 201
>gi|169631609|ref|YP_001705258.1| hypothetical protein MAB_4535c [Mycobacterium abscessus ATCC
19977]
gi|169243576|emb|CAM64604.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=185
Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/187 (38%), Positives = 105/187 (57%), Gaps = 9/187 (4%)
Query 33 SSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLI 92
S GP+FS YG+ S +LGV++V A+VL +I + HR Y RV+ TA W LI
Sbjct 8 SENGPVFSRYGVLSAVLGVITVVALVLSVLITTGHRSQVARDRYDARVLDTAVTWVNTLI 67
Query 93 NMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHREL 152
NM N+D+S+Q L DGT GQL+ ++ ++ + ++G I++VAID
Sbjct 68 NMKKSNLDSSVQTLQDGTAGQLSDHLGELIAGVVKLARTVDADAAGEIDSVAID------ 121
Query 153 DTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMI 212
+ GA+ P LP R D V++VATSV+ + A P+ W++RL VS V +L I
Sbjct 122 --RRGASIPGEDVGLPAV-ERIDRVMVVATSVTRDVNAAPKVNQWHMRLAVSKVGDQLSI 178
Query 213 SRLESIR 219
+ LE +R
Sbjct 179 TGLELLR 185
>gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245 [Mycobacterium intracellulare
ATCC 13950]
Length=292
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (27%), Positives = 97/208 (47%), Gaps = 33/208 (15%)
Query 13 EDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSG 72
EDAE ++ P A + + P+ T+ +A LL VAA G M+W+ H +
Sbjct 115 EDAEPETEP-----ARSRRRLRMPPLSVTWKVAVILLICAFVAAS--GYMMWNRH--EVN 165
Query 73 ERTYLTRVMLTAAEWTAV-LINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEK 131
ER+ + A V L +M+ + +QR+ D + GQ + DF A + + VVE+
Sbjct 166 ERSQRIANFVAGARQGVVNLTSMDCNKAKEDVQRVIDSSTGQFHDDFQARAKDFTTVVEQ 225
Query 132 LRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATS-VSENAGA 190
+ + G + A A+ +++ + FA VL+ ATS ++ AGA
Sbjct 226 SKVVTKGTVNAAAVQSINGD------------------FAL----VLVAATSRITNAAGA 263
Query 191 KPQTVHWNLRLDVSDVDGKLMISRLESI 218
K + +W L++ V + G+ +S +E I
Sbjct 264 KDEPRNWRLKVTVKNDGGQYKMSNVEFI 291
>gi|315443159|ref|YP_004076038.1| protein conserved in bacteria (DUF2133) [Mycobacterium sp. Spyr1]
gi|315261462|gb|ADT98203.1| Uncharacterized protein conserved in bacteria (DUF2133) [Mycobacterium
sp. Spyr1]
Length=218
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (27%), Positives = 81/175 (47%), Gaps = 31/175 (17%)
Query 48 LLGVLSVAAVV--LGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQR 105
L+ VL++A + LG + +HR + R +V A L +N ++ +A +QR
Sbjct 70 LVAVLALAGLAGWLGYQTYESHRAEE-RRNLFVQVGRQGA---LNLTTINWESAEADVQR 125
Query 106 LHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTT 165
+ D G DF +P+ QVV++ ++ S G I +++
Sbjct 126 ILDSATGTFYDDFQQRAEPFVQVVKQAQSKSEGSIAEAGLES------------------ 167
Query 166 KLPPFATRTDSVLLVATSV-SENAG-AKPQTVHWNLRLDVSDVDGKLMISRLESI 218
AT T +LVA +V + NAG A+ Q W +R+ V ++DG+ +S +E +
Sbjct 168 -----ATDTGGQVLVAVTVRTTNAGSAEQQPRAWRMRISVQEIDGEAKVSNVEFV 217
>gi|145222695|ref|YP_001133373.1| hypothetical protein Mflv_2107 [Mycobacterium gilvum PYR-GCK]
gi|145215181|gb|ABP44585.1| hypothetical protein Mflv_2107 [Mycobacterium gilvum PYR-GCK]
Length=225
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/212 (26%), Positives = 94/212 (45%), Gaps = 32/212 (15%)
Query 11 AQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVV--LGAMIWSAHR 68
A E EDDS + A P + A IA L+GVL++A + LG + +H+
Sbjct 41 APEAVEDDSVDADVDETDATPATGAMSHIKLALIAG-LVGVLALAGLAGWLGYQTYESHQ 99
Query 69 DDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQV 128
+ +R +V A L +N ++ +A +QR+ D G DF +P+ QV
Sbjct 100 AEE-QRNLFVQVGRQGA---LNLTTINWESAEADVQRILDSATGTFYDDFQQRAEPFVQV 155
Query 129 VEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSV-SEN 187
V++ ++ S G I +++ AT ++ +LVA +V + N
Sbjct 156 VKQAQSKSEGTIAEAGLES-----------------------ATDSEGQVLVAVTVRTTN 192
Query 188 AGAKPQTVH-WNLRLDVSDVDGKLMISRLESI 218
AG Q W +R+ V ++DG +S +E +
Sbjct 193 AGTPEQQPRAWRMRISVQEIDGDAKVSNVEFV 224
>gi|296169604|ref|ZP_06851224.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895870|gb|EFG75565.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=307
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/184 (25%), Positives = 90/184 (49%), Gaps = 25/184 (13%)
Query 37 PMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNA 96
P +ST +A++L ++ +AA+ + + HRD +R + + A + L +++
Sbjct 146 PKWST--LAASLAVLVIIAALAGSGYMINEHRDAVQQRQHAAEFVAAARQGVVTLTSLDF 203
Query 97 DNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQS 156
+N +QR+ + + G DF + + +VVE+ + S G ++A A+D LDT
Sbjct 204 NNAKQGVQRILENSTGSFKDDFVKMADDFTKVVEQSKVISQGSVQAAAVD-----LDTM- 257
Query 157 GAARPVVTTKLPPFATRTDSVLLVATS--VSENAGAKPQTVHWNLRLDVSDVDGKLMISR 214
T+ +V+LVA++ V+ AGAK ++ L + V+ +L +S+
Sbjct 258 ---------------TKDSAVVLVASTSDVTNAAGAKQDPRNYRLIVTVARDGRQLKMSK 302
Query 215 LESI 218
+E +
Sbjct 303 VEFV 306
>gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
gi|342132079|gb|EGT85320.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
Length=291
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/209 (23%), Positives = 94/209 (45%), Gaps = 26/209 (12%)
Query 13 EDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVL--GAMIWSAHRDD 70
ED D P+ AE+ A +S ++ +A ++ + A V G M+W+ H+ +
Sbjct 105 EDEVSDETPEDAESEAKPARSRRRLRLPSWPVAWKAAVIVLICAFVAASGYMMWNRHQVN 164
Query 71 SGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVE 130
+ + + A + L +M+ + +QR+ D + GQ + DF A + + VVE
Sbjct 165 E-RKQHAANFIAGARQGVVNLTSMDFNKAKEDVQRVIDSSTGQFHDDFQARAKDFTTVVE 223
Query 131 KLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATS-VSENAG 189
+ + + G + A A+ +++ + VL+ ATS ++ AG
Sbjct 224 QSKVVTQGTVNAAAVQSINGDAAL----------------------VLVAATSHITNAAG 261
Query 190 AKPQTVHWNLRLDVSDVDGKLMISRLESI 218
AK + +W L++ V + G+ +S +E I
Sbjct 262 AKDEPRNWRLKVTVKNDGGQYKMSNVEFI 290
>gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395199|gb|AAS03068.1| hypothetical protein MAP_0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461113|gb|EGO39991.1| hypothetical protein MAPs_33170 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=295
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/173 (25%), Positives = 78/173 (46%), Gaps = 26/173 (15%)
Query 48 LLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAV-LINMNADNIDASLQRL 106
++ ++ G M+W H+ + ER L AA V + +++ + +QR+
Sbjct 146 VIALICAFVAASGYMMWERHQ--TSERNQRIANFLAAARQGVVNMTSLDFNKAKEDVQRV 203
Query 107 HDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTK 166
D + GQ DF + + VVE+ + + G + A A+ ++ D S
Sbjct 204 IDSSTGQFRDDFQQRAKDFTTVVEQSKVVTQGTVNAAAVQSI----DGNSAL-------- 251
Query 167 LPPFATRTDSVLLVATS-VSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESI 218
VL+ ATS ++ AGAK + +W L++ V+D G+ +S+LE +
Sbjct 252 ----------VLVAATSRITNAAGAKDEPRNWRLKVTVTDEGGQYKMSKLEFV 294
>gi|118464140|ref|YP_880199.1| hypothetical protein MAV_0938 [Mycobacterium avium 104]
gi|254773828|ref|ZP_05215344.1| hypothetical protein MaviaA2_04007 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165427|gb|ABK66324.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=296
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (25%), Positives = 78/173 (46%), Gaps = 26/173 (15%)
Query 48 LLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAV-LINMNADNIDASLQRL 106
++ ++ G M+W H+ + ER L AA V + +++ + +QR+
Sbjct 147 VIALICAFVAASGYMMWERHQ--TSERNQRIANFLAAARQGVVNMTSLDFNKAKEDVQRV 204
Query 107 HDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTK 166
D + GQ DF + + VVE+ + + G + A A+ ++ D S
Sbjct 205 IDSSTGQFRDDFQQRAKDFTTVVEQSKVVTQGTVNAAAVQSI----DGNSAL-------- 252
Query 167 LPPFATRTDSVLLVATS-VSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESI 218
VL+ ATS ++ AGAK + +W L++ V+D G+ +S+LE +
Sbjct 253 ----------VLVAATSRITNAAGAKDEPRNWRLKVTVTDEGGQYKMSKLEFV 295
>gi|333992103|ref|YP_004524717.1| hypothetical protein JDM601_3463 [Mycobacterium sp. JDM601]
gi|333488071|gb|AEF37463.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=264
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/214 (25%), Positives = 101/214 (48%), Gaps = 32/214 (14%)
Query 10 PAQEDAEDDSRPDAAEAA----AAEPKSSAGPMFSTYGIASTLLGVLSVAAVV-LGAMIW 64
PA+ +A DD P A EAA A +P+ S G + G + L VL++ + + ++
Sbjct 73 PARIEA-DDPAPGAGEAAVDEPAEQPRKSIG-IRRQLGWVAATLAVLAIGGFLAVDVLML 130
Query 65 SAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQP 124
S HRD + + L A + L+++N + +D ++ + D + G+ DF+A
Sbjct 131 SHHRDVALRQHQLGEYAAAARQGVVTLMSLNYETVDDDVKAILDNSTGEFKKDFEAHAGD 190
Query 125 YRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVA--T 182
+ +V + +T +S +DTV +++ S ++V+LVA T
Sbjct 191 FAKVARESKTVTS-------VDTVVSGVESMSD----------------NEAVVLVAATT 227
Query 183 SVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLE 216
V+ AGAK + W L + ++ ++ +S+++
Sbjct 228 KVTNTAGAKEEPRSWRLTVHLAREGDQVKMSKVD 261
>gi|108801052|ref|YP_641249.1| hypothetical protein Mmcs_4088 [Mycobacterium sp. MCS]
gi|119870194|ref|YP_940146.1| hypothetical protein Mkms_4164 [Mycobacterium sp. KMS]
gi|108771471|gb|ABG10193.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696283|gb|ABL93356.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=213
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/163 (27%), Positives = 70/163 (43%), Gaps = 28/163 (17%)
Query 60 GAMIWSAHR--DDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTD 117
G + A+R D+ ER V AA+ L ++ + DA +QR+ D G D
Sbjct 76 GWFGYQAYRSDQDTKERNLFLEVGRQAAQ---NLTTIDWERADADVQRVLDVATGTFYDD 132
Query 118 FDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSV 177
F +P+ QVV++ ++ S G + +++V + T V
Sbjct 133 FQKRAEPFLQVVKEAKSKSVGTLGEAGLESVSGD----------------------TAEV 170
Query 178 LLVATSVSENAGAKPQTVH-WNLRLDVSDVDGKLMISRLESIR 219
L+ T S NAGA Q W +RL V VD +S++E ++
Sbjct 171 LVAVTVKSSNAGAPEQPPRAWRMRLTVQRVDDGAKVSQVEFVQ 213
>gi|118472928|ref|YP_884765.1| hypothetical protein MSMEG_0352 [Mycobacterium smegmatis str.
MC2 155]
gi|118174215|gb|ABK75111.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=200
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/211 (25%), Positives = 93/211 (45%), Gaps = 43/211 (20%)
Query 5 EQSQPPAQEDAEDDSRP----DAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAV--V 58
E +QP +D E D + D+ E +A+ + G + ++GVL +A V
Sbjct 11 ELTQPGQADDQETDEKSGVDTDSREPTSAQVRGVRGAL---------VIGVLLLAIVGGA 61
Query 59 LGAMIWSAHRDDSGERTYLTRVMLTAAEWTAV-LINMNADNIDASLQRLHDGTVGQLNTD 117
G ++W R + +R + ++L A AV L M+ ++I +QR+ DG+ G +
Sbjct 62 TGWLVWQTQRAEQDQR--MNEMLLQAGREAAVNLTTMDFEHIREDIQRVLDGSTGTFYDE 119
Query 118 FDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSV 177
F+ + +VV K ++ + G + I++V + +AR
Sbjct 120 FEQRAPAFEEVVTKTQSKTEGTVTEAGIESVS------ADSAR----------------- 156
Query 178 LLVATSVSENAGAKPQT--VHWNLRLDVSDV 206
+LVA SV + A P+ W +R+DV V
Sbjct 157 VLVAVSVKTSNIAAPEQRPRLWRMRIDVQRV 187
>gi|126436889|ref|YP_001072580.1| hypothetical protein Mjls_4318 [Mycobacterium sp. JLS]
gi|126236689|gb|ABO00090.1| hypothetical protein Mjls_4318 [Mycobacterium sp. JLS]
Length=216
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (27%), Positives = 70/163 (43%), Gaps = 28/163 (17%)
Query 60 GAMIWSAHR--DDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTD 117
G + A+R D+ ER V AA+ L ++ + DA +QR+ D G D
Sbjct 79 GWFGYQAYRSDQDTKERNLFLEVGRQAAQ---NLTTIDWERADADVQRVLDVATGTFYDD 135
Query 118 FDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSV 177
F +P+ QVV++ ++ S G + +++V + T V
Sbjct 136 FQKRAEPFLQVVKEAKSKSVGTLGEAGLESVSGD----------------------TAEV 173
Query 178 LLVATSVSENAGAKPQTVH-WNLRLDVSDVDGKLMISRLESIR 219
L+ T S NAGA Q W +RL V VD +S++E ++
Sbjct 174 LVAVTVKSSNAGAPEQPPRAWRMRLTVQRVDDGAKVSQVEFVQ 216
>gi|118467240|ref|YP_881730.1| hypothetical protein MAV_2538 [Mycobacterium avium 104]
gi|118168527|gb|ABK69424.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=192
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/202 (25%), Positives = 91/202 (46%), Gaps = 31/202 (15%)
Query 16 EDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERT 75
+D + PDA + A A+ S + + +G+ T++G+ ++ G + +H+ +R
Sbjct 16 DDAAEPDAEDPAPAKKLRSPALLATVFGLV-TVVGLAALGGW-FGYQTYQSHQAQQ-QRE 72
Query 76 YLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTH 135
+ R+ A L ++ + DA +QR+ D G DF +P+ VV+K ++
Sbjct 73 LMVRIGRQGA---LNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQSK 129
Query 136 SSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSV-SENAGAKPQT 194
S G I L++QSG +++ +LVA SV + N GA Q
Sbjct 130 SVGTITEAG-------LESQSG----------------SEAQVLVAVSVKTSNLGAAEQD 166
Query 195 -VHWNLRLDVSDVDGKLMISRL 215
HW +R+ V V + +S +
Sbjct 167 PRHWRMRVIVQKVGNDMKVSNV 188
>gi|183984145|ref|YP_001852436.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
marinum M]
gi|183177471|gb|ACC42581.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
marinum M]
Length=495
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/135 (21%), Positives = 62/135 (46%), Gaps = 21/135 (15%)
Query 84 AAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAV 143
A ++ L ++N IDA +QR+ DG+ G ++DF ++Q + + + G+
Sbjct 381 AKQFAISLTSVNPQTIDADIQRILDGSTGAFHSDFADKSAQFKQSIVDAGSATQGKATGA 440
Query 144 AIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDV 203
++++ SG T V+ V ++++++ G + + W LR+ +
Sbjct 441 GLESI-------SG--------------TTAHVVVSVTSNITKSTGVQQEPRQWRLRIQI 479
Query 204 SDVDGKLMISRLESI 218
+D + SR+E +
Sbjct 480 EKIDDAYLASRVEFV 494
>gi|118619584|ref|YP_907916.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
ulcerans Agy99]
gi|118571694|gb|ABL06445.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
ulcerans Agy99]
Length=495
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/135 (21%), Positives = 62/135 (46%), Gaps = 21/135 (15%)
Query 84 AAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAV 143
A ++ L ++N IDA +QR+ DG+ G ++DF ++Q + + + G+
Sbjct 381 AKQFAISLTSVNPQTIDADIQRILDGSTGAFHSDFADKSAQFKQSIVDAGSATQGKATGA 440
Query 144 AIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDV 203
++++ SG T V+ V ++++++ G + + W LR+ +
Sbjct 441 GLESI-------SG--------------TTAHVVVSVTSNITKSTGVQQEPRQWRLRIQI 479
Query 204 SDVDGKLMISRLESI 218
+D + SR+E +
Sbjct 480 EKIDDAYLASRVEFV 494
>gi|54022574|ref|YP_116816.1| hypothetical protein nfa6070 [Nocardia farcinica IFM 10152]
gi|54014082|dbj|BAD55452.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=197
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 61/130 (47%), Gaps = 7/130 (5%)
Query 13 EDAEDDSRPDAAEAAAAEPKSSAGPM-FSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDS 71
ED E +AAE+A A PK + + ST G S L V +V AVV GA+ WSA R D
Sbjct 4 EDIEPGQPREAAESAPARPKGATVSIPLSTIGW-SVALAVATVLAVVFGALWWSA-RGDL 61
Query 72 GERTYLT----RVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQ 127
ER R A ++ +N ++ A + +L T QL T FDA Q
Sbjct 62 DERDARAADERRAEQVATDYAVGAATVNYQDVTAWVGKLKANTTPQLATKFDATAPKLEQ 121
Query 128 VVEKLRTHSS 137
++ L+ S+
Sbjct 122 ILVPLKWTST 131
>gi|120405550|ref|YP_955379.1| hypothetical protein Mvan_4598 [Mycobacterium vanbaalenii PYR-1]
gi|119958368|gb|ABM15373.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=244
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/180 (24%), Positives = 77/180 (43%), Gaps = 41/180 (22%)
Query 48 LLGVLSVAAVV--LGAMIWSAHRDDSGERTYLT-----RVMLTAAEWTAVLINMNADNID 100
L+GVL++A + +G + A+RD+ +L + LT +W N +
Sbjct 96 LVGVLALAGLTAWMGYRTYEANRDEHRRELFLQVGRQGALNLTTIDW---------QNAE 146
Query 101 ASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAAR 160
A +QR+ D G DF QP+ +VV++ ++ S G + +++
Sbjct 147 ADVQRILDSATGTFYDDFQQRAQPFVEVVKQAQSKSVGTVAEAGLES------------- 193
Query 161 PVVTTKLPPFATRTDSVLLVATSV-SENAGAKPQTVH-WNLRLDVSDVDGKLMISRLESI 218
A ++ +LVA +V + NAGA Q W +R+ V + +S +E +
Sbjct 194 ----------AGANEAQVLVAVTVKTSNAGAPEQEPRAWRMRISVEKIGDDAKVSNVEFV 243
>gi|169628099|ref|YP_001701748.1| hypothetical protein MAB_1004c [Mycobacterium abscessus ATCC
19977]
gi|169240066|emb|CAM61094.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=229
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (23%), Positives = 93/207 (45%), Gaps = 34/207 (16%)
Query 13 EDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHR-DDS 71
E A D DAA+ A+ ++ G +A+ ++G L V + + G +W H+ D +
Sbjct 56 ETASSDEDGDAAKGASWVRYAALG------AVAAIMVGAL-VFSGIFGWKVWQQHQIDAA 108
Query 72 GERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEK 131
GE+ + A +T L ++++++ID S +++ +G G L DF RQ++
Sbjct 109 GEQ-----ALAVAIPYTETLTSIDSNDIDESFRKILNGATGDLKKDFTPASVQLRQLLLD 163
Query 132 LRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAK 191
+ S G++ AI Q + VV +++V S++
Sbjct 164 NKAASHGKVVNSAI---------QYKSTNKVVL------------LMMVDQSITNTQRPD 202
Query 192 PQTVHWNLRLDVSDVDGKLMISRLESI 218
P+ +++ + +DG+ + S+LE +
Sbjct 203 PRVDKSRMKITMEKIDGRWLASKLEYL 229
>gi|342861410|ref|ZP_08718058.1| hypothetical protein MCOL_21101 [Mycobacterium colombiense CECT
3035]
gi|342131310|gb|EGT84591.1| hypothetical protein MCOL_21101 [Mycobacterium colombiense CECT
3035]
Length=240
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/166 (26%), Positives = 71/166 (43%), Gaps = 37/166 (22%)
Query 61 AMIWSAHRDDSGERTYLTRVMLTAAEWTA-------VLINMNADNIDASLQRLHDGTVGQ 113
AM+ RD L R AAE+TA L+++NA + +QR+ D T GQ
Sbjct 103 AMMVRHQRD-------LVRKQQDAAEFTAAARQVVVTLMSINAASAKDDVQRIIDSTTGQ 155
Query 114 LNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATR 173
+F + + +V + + + ++A A++++ +
Sbjct 156 FKDEFQRAAEDFTKVAQNAKVSTKTSVQATAVESISHD---------------------- 193
Query 174 TDSVLLVATSVSEN-AGAKPQTVHWNLRLDVSDVDGKLMISRLESI 218
T VL+ A+S N AGA Q W L L ++ GK+ +S +E I
Sbjct 194 TAVVLVAASSTLTNAAGATEQPRSWRLSLKLARDGGKIKMSSMEFI 239
>gi|254819944|ref|ZP_05224945.1| hypothetical protein MintA_08466 [Mycobacterium intracellulare
ATCC 13950]
Length=243
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/202 (25%), Positives = 89/202 (45%), Gaps = 31/202 (15%)
Query 16 EDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERT 75
+D + PDA + A+ S + + +G+ T++G+ ++ G + +H+ +R
Sbjct 67 DDAAEPDAEDPVPAKKLRSPALLATVFGLV-TVVGLAALGGW-FGYQTYQSHQAQQ-QRE 123
Query 76 YLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTH 135
+ R+ A L ++ + DA +QR+ D G DF +P+ VV+K ++
Sbjct 124 LMVRIGRQGA---LNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQSK 180
Query 136 SSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSV-SENAGAKPQT 194
S G I L++QSG ++ +LVA SV + N GA Q
Sbjct 181 SVGTITEAG-------LESQSG----------------NEAQVLVAVSVKTSNLGAAEQD 217
Query 195 V-HWNLRLDVSDVDGKLMISRL 215
HW +R+ V V + +S +
Sbjct 218 PRHWRMRVIVQKVGNDMKVSNV 239
>gi|344219195|gb|AEM99825.1| hypothetical protein MTCTRI2_1402 [Mycobacterium tuberculosis
CTRI-2]
Length=258
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/217 (24%), Positives = 98/217 (46%), Gaps = 39/217 (17%)
Query 13 EDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVL-------GAMIWS 65
EDAED +AA+ AA S + ST+ ++ A V++ G ++W
Sbjct 69 EDAEDYDDYEAADQEAARSASWRRRLRVRLPRLSTI--AMAAAVVIICGFTGLSGYIVWQ 126
Query 66 AHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQ---RLHDGTVGQLNTDFDAVV 122
H ++ ER R AA +INM + + + + + R+ D + G+ DF
Sbjct 127 HH--EATERQ--QRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRA 182
Query 123 QPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVAT 182
+ +VVE+ + + G + A A+++++ + VL+ AT
Sbjct 183 ADFTKVVEQSKVVTEGTVNATAVESMNE----------------------HSAVVLVAAT 220
Query 183 S-VSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESI 218
S V+ +AGAK + W L++ V++ G+ +S++E +
Sbjct 221 SRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 257
>gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 [Rhodococcus opacus B4]
gi|226239496|dbj|BAH49844.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=189
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/126 (27%), Positives = 61/126 (49%), Gaps = 8/126 (6%)
Query 21 PDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRV 80
PD E AA EP++ A T G+A +L VL++A + + HR E + +
Sbjct 20 PD--EDAAPEPRTPA----VTAGVA--ILSVLALAFLAVSGYFGYTHRQAEQEAQQRSEI 71
Query 81 MLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRI 140
+ A + L M+ + D +Q++ DG+ G+ +F+A + V+++ R S G +
Sbjct 72 VDAARQGVVNLTTMDFERADEDVQKVLDGSAGEFRDEFEARSKDLIAVMQEARVKSVGEV 131
Query 141 EAVAID 146
AI+
Sbjct 132 RQAAIE 137
>gi|118473172|ref|YP_889454.1| hypothetical protein MSMEG_5208 [Mycobacterium smegmatis str.
MC2 155]
gi|118174459|gb|ABK75355.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=192
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/129 (28%), Positives = 56/129 (44%), Gaps = 23/129 (17%)
Query 91 LINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHR 150
L N+ + DA +QR+ D G DF + Y +VV+++++ S G I + A+++V
Sbjct 85 LTNVGWETADADVQRVLDSASGTFFDDFQKRAESYLEVVKQVQSKSEGTITSSALESVD- 143
Query 151 ELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQT-VHWNLRLDVSDVDGK 209
T VL+ T S NAG Q W +RL V + G+
Sbjct 144 ---------------------DNTAKVLVSVTVKSTNAGVPEQAPQFWRMRLTVEENAGQ 182
Query 210 LMISRLESI 218
+S +E I
Sbjct 183 AKVSDVEFI 191
>gi|333992917|ref|YP_004525531.1| hypothetical protein JDM601_4277 [Mycobacterium sp. JDM601]
gi|333488885|gb|AEF38277.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=228
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/176 (21%), Positives = 79/176 (45%), Gaps = 25/176 (14%)
Query 45 ASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQ 104
A+ + V S A +VL A++ HR ++ + + A + L++++ ++ + S+Q
Sbjct 75 AAVAVVVCSCALLVLSALMVQQHRRAQADQRHRAEFVAVARQVVVTLMSIDYNDAEGSVQ 134
Query 105 RLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVT 164
R+ + + G T+F + +V + + + + A A++++
Sbjct 135 RIVNNSTGPFRTEFQGAADDFVKVSKDAKVTTKATVNAAAVESM---------------- 178
Query 165 TKLPPFATRTDSVLLVATS--VSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESI 218
T +V+LVA S VS AGA+ W L +D+ ++ +S++E +
Sbjct 179 -------TPDSAVVLVAASSTVSNAAGAEDAPRRWRLTVDLQREGDQIKMSKVEFV 227
>gi|54022510|ref|YP_116752.1| hypothetical protein nfa5430 [Nocardia farcinica IFM 10152]
gi|54014018|dbj|BAD55388.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=315
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/142 (27%), Positives = 60/142 (43%), Gaps = 23/142 (16%)
Query 78 TRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSS 137
T + TA + L + AD+ + R+ GQ T+FD V P+ +V++ + S+
Sbjct 195 TEYVQTARQAILNLTTIRADSAKEDIDRILSLASGQFKTEFDGRVDPFLSIVQQAKVVSN 254
Query 138 GRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAG-AKPQTVH 196
G I A+ E D A VL+ A NAG A+PQT +
Sbjct 255 GEIVEAAL-----ESDDDDSA-----------------KVLVAAKQTLTNAGQAEPQTRY 292
Query 197 WNLRLDVSDVDGKLMISRLESI 218
+ R+ V+ D L S +E +
Sbjct 293 YRFRVTVTRSDAGLTASNVEFV 314
>gi|31792559|ref|NP_855052.1| hypothetical protein Mb1398c [Mycobacterium bovis AF2122/97]
gi|31618148|emb|CAD94259.1| POSSIBLE MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97]
Length=261
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/183 (23%), Positives = 86/183 (47%), Gaps = 31/183 (16%)
Query 40 STYGIASTLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNI 99
ST +A+ ++ + + G ++W H ++ ER R AA +INMN+ +
Sbjct 105 STIAMAAAVVIICGFTGLS-GYIVWQHH--EATERQ--QRAAAFAAGAKQGVINMNSLDF 159
Query 100 DASLQ---RLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQS 156
+ + + R+ D + G+ DF + +VVE+ + + G + A A+++++
Sbjct 160 NKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNE------ 213
Query 157 GAARPVVTTKLPPFATRTDSVLLVATS-VSENAGAKPQTVHWNLRLDVSDVDGKLMISRL 215
+ VL+ ATS V+ +AGAK + W L++ V++ G+ +S++
Sbjct 214 ----------------HSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKV 257
Query 216 ESI 218
E +
Sbjct 258 EFV 260
>gi|339294897|gb|AEJ47008.1| MCE associated membrane protein [Mycobacterium tuberculosis CCDC5079]
Length=191
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/207 (27%), Positives = 87/207 (43%), Gaps = 36/207 (17%)
Query 14 DAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAH----RD 69
DAEDD+ + AEAA P + M + + L G++ V A+ + W R
Sbjct 8 DAEDDAVSEIAEAAGVSPAPAKPSMSAPRRM--LLFGLVVVVALAVLLCCWGFRVQRARH 65
Query 70 DSGERTYLTRVMLTAAEWTAV-LINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQV 128
+R + L AA A+ L ++ N +A ++R+ DG G+ DF QP+ +V
Sbjct 66 AQDQRGHF----LQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEV 121
Query 129 VEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSV-SEN 187
+ + + + G I + T + DT LVA SV + N
Sbjct 122 LRQAKASTVGTITEAGLQT--QTADTAQA---------------------LVAVSVQTSN 158
Query 188 AG-AKPQTVHWNLRLDVSDVDGKLMIS 213
AG A P W +R+ V V +L +S
Sbjct 159 AGEADPVPRAWRMRITVQRVGDRLKVS 185
>gi|108800620|ref|YP_640817.1| hypothetical protein Mmcs_3654 [Mycobacterium sp. MCS]
gi|119869759|ref|YP_939711.1| hypothetical protein Mkms_3727 [Mycobacterium sp. KMS]
gi|108771039|gb|ABG09761.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695848|gb|ABL92921.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=289
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/220 (22%), Positives = 91/220 (42%), Gaps = 28/220 (12%)
Query 2 PDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVL-- 59
P+ E + P + E S+PD A + T+ + + VL + A +
Sbjct 94 PEVESTTAPETDGDEVSSKPDKKRGARR--RPRLRLPRLTWKRLAVTIAVLVICASLAAS 151
Query 60 GAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFD 119
G M+W HR ER A + L++++ + ++R+ D + GQ DF+
Sbjct 152 GYMLWH-HRQAVAEREQRAEYAAAARQGVVTLMSLDFNKAQEDVKRIIDNSTGQFKEDFE 210
Query 120 AVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLL 179
+ + +V + + + + A+ ++ T A SVL+
Sbjct 211 QQAEAFAEVAQDSKVVTEVNVNLAAVKSM-----TDDSA-----------------SVLV 248
Query 180 VATS-VSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESI 218
ATS V+ AGAK + W L +++S ++ +S++E +
Sbjct 249 SATSRVTNAAGAKQEPRAWRLAVELSREGDQIKMSKVEFV 288
>gi|343927143|ref|ZP_08766624.1| hypothetical protein GOALK_084_00190 [Gordonia alkanivorans NBRC
16433]
gi|343762955|dbj|GAA13550.1| hypothetical protein GOALK_084_00190 [Gordonia alkanivorans NBRC
16433]
Length=265
Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/197 (26%), Positives = 84/197 (43%), Gaps = 28/197 (14%)
Query 26 AAAAEPKSSAGPMFSTYGIASTL---LGVLSVAAVV--LGAMIWSAHRDDSGERTYLTRV 80
A A EP+ + G FS AS + LG V A++ +G + W + S E T
Sbjct 54 ATAPEPQPATGKEFSLTVTASGIKRALGAFLVIALIAAVGFLGWRTYTLQS-EATAFADA 112
Query 81 MLTAAEW-TAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGR 139
+A++ T ++ +NADN S + L + G+L + Q VE L+ S +
Sbjct 113 KTASADFVTKLVTTLNADNAGNSKELLGPLSTGELRKRLEQERADTEQNVEALKIEVSSK 172
Query 140 IEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNL 199
I VA++TV E D+ VT + T S+++
Sbjct 173 ISVVAVETV--ETDSAKTVVMAEVTGRSVKLPTGGTSLMV-------------------F 211
Query 200 RLDVSDVDGKLMISRLE 216
RLD+ DGK ++S+++
Sbjct 212 RLDLDKEDGKWLVSKVD 228
>gi|312138216|ref|YP_004005552.1| mce associated protein mas2a [Rhodococcus equi 103S]
gi|311887555|emb|CBH46867.1| putative Mce associated protein Mas2A [Rhodococcus equi 103S]
Length=262
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/135 (25%), Positives = 61/135 (46%), Gaps = 23/135 (17%)
Query 85 AEWTAVLIN-MNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAV 143
A TA+ I+ + +D+ L +L +GT G L D DA ++ + VV +L ++G +
Sbjct 149 ARATAINISTLRSDSAKEDLDKLFEGTTGPLRADLDARLEDFANVVSQLNVSTTGEV--- 205
Query 144 AIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDV 203
V L+++ G + + L+ + +NA P + LR+ +
Sbjct 206 ----VEAGLESEDGNCK---------------TSLVAVKANQKNADEAPVDKSFRLRVVI 246
Query 204 SDVDGKLMISRLESI 218
D GKL+ S +E +
Sbjct 247 CDEGGKLLASNVEFV 261
>gi|289758082|ref|ZP_06517460.1| mce associated membrane protein [Mycobacterium tuberculosis T85]
gi|294996894|ref|ZP_06802585.1| hypothetical protein Mtub2_20908 [Mycobacterium tuberculosis
210]
gi|289713646|gb|EFD77658.1| mce associated membrane protein [Mycobacterium tuberculosis T85]
gi|339298520|gb|AEJ50630.1| MCE associated membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=191
Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/207 (27%), Positives = 87/207 (43%), Gaps = 36/207 (17%)
Query 14 DAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAH----RD 69
DAEDD+ + AEAA P + M + + L G++ V A+ + W R
Sbjct 8 DAEDDAVSEIAEAAGVSPAPAKPSMSAPRRM--LLFGLVVVVALAVLLCCWGFRVQRARH 65
Query 70 DSGERTYLTRVMLTAAEWTAV-LINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQV 128
+R + L AA A+ L ++ N +A ++R+ DG G+ DF QP+ +V
Sbjct 66 AQDQRGHF----LQAARQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEV 121
Query 129 VEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSV-SEN 187
+ + + + G I + T + DT LVA SV + N
Sbjct 122 LRQAKASTVGTITEAGLQT--QTADTAQA---------------------LVAVSVQTSN 158
Query 188 AG-AKPQTVHWNLRLDVSDVDGKLMIS 213
AG A P W +R+ V V ++ +S
Sbjct 159 AGEADPVPRAWRMRITVQRVGDRVKVS 185
Lambda K H
0.313 0.127 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 270223565960
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40