BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0200 Length=229 Score E Sequences producing significant alignments: (Bits) Value gi|15607341|ref|NP_214714.1| transmembrane protein [Mycobacteriu... 447 5e-124 gi|340625237|ref|YP_004743689.1| hypothetical protein MCAN_02061... 445 2e-123 gi|339296910|gb|AEJ49020.1| transmembrane protein [Mycobacterium... 431 5e-119 gi|167968801|ref|ZP_02551078.1| conserved transmembrane protein ... 369 2e-100 gi|240172086|ref|ZP_04750745.1| transmembrane protein [Mycobacte... 353 9e-96 gi|15828411|ref|NP_302674.1| membrane protein [Mycobacterium lep... 344 5e-93 gi|118616819|ref|YP_905151.1| transmembrane protein [Mycobacteri... 339 2e-91 gi|289748676|ref|ZP_06508054.1| LOW QUALITY PROTEIN: conserved m... 325 4e-87 gi|118464479|ref|YP_884096.1| transmembrane protein [Mycobacteri... 302 2e-80 gi|296167417|ref|ZP_06849818.1| transmembrane protein [Mycobacte... 300 1e-79 gi|342859344|ref|ZP_08715998.1| transmembrane protein [Mycobacte... 298 3e-79 gi|254819016|ref|ZP_05224017.1| putative transmembrane protein [... 296 2e-78 gi|108797139|ref|YP_637336.1| hypothetical protein Mmcs_0159 [My... 271 4e-71 gi|126432762|ref|YP_001068453.1| hypothetical protein Mjls_0149 ... 270 9e-71 gi|120401213|ref|YP_951042.1| putative transmembrane protein [My... 238 7e-61 gi|333988803|ref|YP_004521417.1| transmembrane protein [Mycobact... 223 1e-56 gi|118472229|ref|YP_884651.1| transmembrane protein [Mycobacteri... 223 2e-56 gi|145221073|ref|YP_001131751.1| hypothetical protein Mflv_0469 ... 207 8e-52 gi|169631608|ref|YP_001705257.1| hypothetical protein MAB_4534c ... 194 1e-47 gi|2384667|gb|AAB69855.1| orfH-200 [Mycobacterium tuberculosis H... 158 6e-37 gi|342857621|ref|ZP_08714277.1| hypothetical protein MCOL_02055 ... 51.6 8e-05 gi|226361927|ref|YP_002779705.1| hypothetical protein ROP_25130 ... 45.8 0.005 gi|145222155|ref|YP_001132833.1| hypothetical protein Mflv_1563 ... 43.1 0.035 gi|118471039|ref|YP_887185.1| hypothetical protein MSMEG_2865 [M... 42.7 0.038 gi|120406143|ref|YP_955972.1| hypothetical protein Mvan_5195 [My... 39.3 0.45 gi|54022511|ref|YP_116753.1| hypothetical protein nfa5440 [Nocar... 39.3 0.50 gi|126437557|ref|YP_001073248.1| hypothetical protein Mjls_4993 ... 38.1 1.1 gi|111018910|ref|YP_701882.1| hypothetical protein RHA1_ro01913 ... 37.7 1.4 gi|315443160|ref|YP_004076039.1| hypothetical protein Mspyr1_153... 37.0 2.5 gi|254818559|ref|ZP_05223560.1| hypothetical protein MintA_01484... 36.6 2.8 gi|223984179|ref|ZP_03634329.1| hypothetical protein HOLDEFILI_0... 36.6 2.8 gi|118470007|ref|YP_885288.1| hypothetical protein MSMEG_0885 [M... 36.2 3.4 gi|118464121|ref|YP_880215.1| hypothetical protein MAV_0955 [Myc... 36.2 3.7 gi|254773844|ref|ZP_05215360.1| hypothetical protein MaviaA2_040... 36.2 3.8 gi|336461214|gb|EGO40090.1| hypothetical protein MAPs_32990 [Myc... 36.2 3.9 gi|41406865|ref|NP_959701.1| hypothetical protein MAP0767c [Myco... 36.2 4.3 gi|118462794|ref|YP_881731.1| hypothetical protein MAV_2539 [Myc... 35.8 4.5 gi|342860193|ref|ZP_08716845.1| hypothetical protein MCOL_14980 ... 35.8 5.1 gi|118462494|ref|YP_879395.1| hypothetical protein MAV_0098 [Myc... 35.8 5.1 gi|254773144|ref|ZP_05214660.1| hypothetical protein MaviaA2_004... 35.8 5.6 gi|254819945|ref|ZP_05224946.1| hypothetical protein MintA_08471... 35.4 7.1 gi|108801051|ref|YP_641248.1| hypothetical protein Mmcs_4087 [My... 35.0 8.5 >gi|15607341|ref|NP_214714.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15839580|ref|NP_334617.1| hypothetical protein MT0210 [Mycobacterium tuberculosis CDC1551] gi|31791378|ref|NP_853871.1| transmembrane protein [Mycobacterium bovis AF2122/97] 74 more sequence titles Length=229 Score = 447 bits (1150), Expect = 5e-124, Method: Compositional matrix adjust. Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD Sbjct 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET Sbjct 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP Sbjct 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR Sbjct 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 >gi|340625237|ref|YP_004743689.1| hypothetical protein MCAN_02061 [Mycobacterium canettii CIPT 140010059] gi|340003427|emb|CCC42547.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=229 Score = 445 bits (1144), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 228/229 (99%), Positives = 228/229 (99%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD Sbjct 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET Sbjct 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP Sbjct 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGS WLVLDVTPINAR Sbjct 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSDWLVLDVTPINAR 229 >gi|339296910|gb|AEJ49020.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=222 Score = 431 bits (1107), Expect = 5e-119, Method: Compositional matrix adjust. Identities = 221/222 (99%), Positives = 222/222 (100%), Gaps = 0/222 (0%) Query 8 VVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRDSVTVGTD 67 +VFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRDSVTVGTD Sbjct 1 MVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRDSVTVGTD 60 Query 68 DDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETVASFSPS 127 DDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETVASFSPS Sbjct 61 DDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETVASFSPS 120 Query 128 APAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAV 187 APAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAV Sbjct 121 APAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAV 180 Query 188 ILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 ILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR Sbjct 181 ILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 222 >gi|167968801|ref|ZP_02551078.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] Length=189 Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 188/189 (99%), Positives = 189/189 (100%), Gaps = 0/189 (0%) Query 41 VLVLLVVEGVAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPD 100 +LVLLVVEGVAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPD Sbjct 1 MLVLLVVEGVAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPD 60 Query 101 RDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLA 160 RDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLA Sbjct 61 RDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLA 120 Query 161 RRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLV 220 RRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLV Sbjct 121 RRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLV 180 Query 221 LDVTPINAR 229 LDVTPINAR Sbjct 181 LDVTPINAR 189 >gi|240172086|ref|ZP_04750745.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=233 Score = 353 bits (907), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 176/228 (78%), Positives = 197/228 (87%), Gaps = 0/228 (0%) Query 2 RNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRDS 61 RNAWRL VFDV APL AL IG +LGWP WW+S CSVLVLL+ EGVA+NFWL RRD+ Sbjct 6 RNAWRLAVFDVAAPLVAAMALLVIGFVLGWPWWWISACSVLVLLIAEGVAVNFWLFRRDA 65 Query 62 VTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETV 121 VTVGTDDDAPGLRLAVVFLC AA+ AAV+TGY WTTPDR+FNRDSR VV +ATGMAE V Sbjct 66 VTVGTDDDAPGLRLAVVFLCTAALVAAVLTGYTHWTTPDREFNRDSRTVVQVATGMAEAV 125 Query 122 ASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPS 181 ASFSP+AP A+VDRAAAMMVP+ A FKEQYAKSSADL +R VTAQAATL+AGVEA+GP+ Sbjct 126 ASFSPTAPNASVDRAAAMMVPDRAQAFKEQYAKSSADLVQRKVTAQAATLSAGVEALGPA 185 Query 182 AASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 ASVAVILRV+Q+ PGQP SQAA A+RVTLTKRG+ WLVLDVTPIN+R Sbjct 186 DASVAVILRVTQNSPGQPPSQAAPAVRVTLTKRGNDWLVLDVTPINSR 233 >gi|15828411|ref|NP_302674.1| membrane protein [Mycobacterium leprae TN] gi|221230888|ref|YP_002504304.1| hypothetical protein MLBr_02615 [Mycobacterium leprae Br4923] gi|2104602|emb|CAB08802.1| unknown [Mycobacterium leprae] gi|13093841|emb|CAC32147.1| probable membrane protein [Mycobacterium leprae] gi|219933995|emb|CAR72715.1| probable membrane protein [Mycobacterium leprae Br4923] Length=229 Score = 344 bits (883), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 171/229 (75%), Positives = 196/229 (86%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN WRL+ FDV+APL IAAL IGV+L WP WWVS CSVLVLL+VEGV +NFWLLRRD Sbjct 1 MRNRWRLLAFDVVAPLVAIAALVMIGVVLDWPRWWVSACSVLVLLIVEGVGVNFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SVT+GTDDDAPGLRLAVV +C AA+ AAV+ GY+ WT+PDRDF+ DSREVV +ATGMAE Sbjct 61 SVTIGTDDDAPGLRLAVVSVCTAALCAAVLIGYMHWTSPDRDFSLDSREVVQIATGMAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 +ASF+PSAP +++DRAAAM++P+ AG FKEQY KSSADLARR VTAQA+ LAAGVEAIG Sbjct 121 MASFTPSAPTSSIDRAAAMIMPDQAGVFKEQYRKSSADLARRNVTAQASVLAAGVEAIGS 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 SAASVAVILRV+Q+ PGQP SQAA A+RVTL KRGS WLV DV INAR Sbjct 181 SAASVAVILRVTQNTPGQPPSQAAPAVRVTLIKRGSDWLVTDVLSINAR 229 >gi|118616819|ref|YP_905151.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|183980471|ref|YP_001848762.1| transmembrane protein [Mycobacterium marinum M] gi|118568929|gb|ABL03680.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] gi|183173797|gb|ACC38907.1| conserved transmembrane protein [Mycobacterium marinum M] Length=229 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 174/229 (76%), Positives = 195/229 (86%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRNAWRL FD+LAPL IAAL IG +LGWP WW+S CSVLVLLV+EGVA+NFWL RRD Sbjct 1 MRNAWRLAAFDILAPLVAIAALVMIGFILGWPWWWISACSVLVLLVLEGVAVNFWLFRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 +VTVGTDD+APGLRLAVVFLC AA+ AAV+TGY WT+PDRDFNRDSR VV +ATGMAE Sbjct 61 AVTVGTDDEAPGLRLAVVFLCTAALVAAVLTGYTHWTSPDRDFNRDSRRVVAIATGMAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 VASFSP AP A+ DRAAAMMVPE FK QYAKSSADL + +TAQA TL+AGVEA+GP Sbjct 121 VASFSPGAPNASADRAAAMMVPERVAEFKAQYAKSSADLVQHKITAQADTLSAGVEALGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 SAASVAVILRV+Q+ PGQP SQAA ALRV+LTKRG+ WLVLDV PIN+R Sbjct 181 SAASVAVILRVTQNSPGQPPSQAAPALRVSLTKRGNDWLVLDVVPINSR 229 >gi|289748676|ref|ZP_06508054.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis T92] gi|289689263|gb|EFD56692.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis T92] Length=230 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 199/206 (97%), Positives = 202/206 (99%), Gaps = 1/206 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD Sbjct 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET Sbjct 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP Sbjct 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARA 206 SAASVAVILRVSQSIP +P Q++ A Sbjct 181 SAASVAVILRVSQSIP-RPADQSSGA 205 >gi|118464479|ref|YP_884096.1| transmembrane protein [Mycobacterium avium 104] gi|254777414|ref|ZP_05218930.1| putative transmembrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165766|gb|ABK66663.1| putative conserved transmembrane protein [Mycobacterium avium 104] Length=227 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 170/226 (76%), Positives = 193/226 (86%), Gaps = 0/226 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN WRL FD+ AP+A IAAL AIGV+LGWPLWWVS CSVLVLL+VEGV INFWLLRRD Sbjct 1 MRNIWRLFAFDIAAPVAAIAALLAIGVVLGWPLWWVSACSVLVLLIVEGVLINFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SV++GTDDDAPGLRLAVV LC AA++AAV TGY WT DRDF DS +VV +ATGMAE+ Sbjct 61 SVSLGTDDDAPGLRLAVVLLCTAALAAAVATGYTHWTRADRDFTDDSHKVVAIATGMAES 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 +ASFSP+AP A+DRAAAM+VPEHA FKEQY KSSA+LA+ VTAQAAT++AGVEA+GP Sbjct 121 MASFSPTAPTGAIDRAAAMVVPEHAAAFKEQYTKSSAELAQHNVTAQAATVSAGVEALGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 +AASVAVILRV+Q+ PGQP SQAA ALRVTLTKRG WLV DV PI Sbjct 181 AAASVAVILRVTQNAPGQPPSQAAPALRVTLTKRGGDWLVADVLPI 226 >gi|296167417|ref|ZP_06849818.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897226|gb|EFG76831.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=227 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 166/226 (74%), Positives = 190/226 (85%), Gaps = 0/226 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN WRL+ FD+LAPLA IAAL AIGV+L WPLWWVS CSVL LL+VEGV +NFWLLRRD Sbjct 1 MRNLWRLLAFDILAPLAAIAALLAIGVILDWPLWWVSACSVLALLIVEGVVVNFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SV+VGTDDDAPGLRLAVVFLC AA+ AAVVT Y WT DR+F DSR+VV +ATGMAE Sbjct 61 SVSVGTDDDAPGLRLAVVFLCTAALVAAVVTAYTHWTRSDREFKDDSRDVVRVATGMAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 +ASF+P AP +++DRA A++VPEHA FKEQY KSSA+LA+ VTAQAATLAAGVEA+GP Sbjct 121 MASFTPGAPDSSIDRATALIVPEHAAAFKEQYTKSSAELAQHNVTAQAATLAAGVEALGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 SAASVAVILRV+Q+ PGQP S++A ALRV LTK G WLV DV PI Sbjct 181 SAASVAVILRVTQNAPGQPASRSAPALRVALTKHGGAWLVSDVLPI 226 >gi|342859344|ref|ZP_08715998.1| transmembrane protein [Mycobacterium colombiense CECT 3035] gi|342133585|gb|EGT86788.1| transmembrane protein [Mycobacterium colombiense CECT 3035] Length=227 Score = 298 bits (764), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 168/226 (75%), Positives = 193/226 (86%), Gaps = 0/226 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN WRL FD+LAPLA IAAL AIG++LGWPLWWVS CSVL+LL+VEGV +NFWLLRRD Sbjct 1 MRNVWRLFAFDILAPLAAIAALLAIGLVLGWPLWWVSACSVLILLIVEGVLVNFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SV+VGTDDDAPGLRLAVV LC AA++AAV TGY WT D DF DSR+VV +ATGMAE Sbjct 61 SVSVGTDDDAPGLRLAVVLLCTAALAAAVATGYTHWTRTDNDFTNDSRQVVTVATGMAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 +ASFSP+AP ++DRA AM+VPEHA FKEQY+KSSADLA+ VTAQA T++AGVEA+GP Sbjct 121 MASFSPTAPTGSIDRATAMIVPEHAAAFKEQYSKSSADLAQHNVTAQATTVSAGVEALGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 +AASVAVILRV+Q+ PGQP SQAA ALRVTLTKRGS WLV DV P+ Sbjct 181 AAASVAVILRVTQNTPGQPPSQAAPALRVTLTKRGSDWLVADVLPV 226 >gi|254819016|ref|ZP_05224017.1| putative transmembrane protein [Mycobacterium intracellulare ATCC 13950] Length=227 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 168/226 (75%), Positives = 191/226 (85%), Gaps = 0/226 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN WRL FD+ APLA IAAL AIGV+LGWPLWWVS CSVLVLL++EGVA+NFWLLRRD Sbjct 1 MRNIWRLFAFDIAAPLAAIAALVAIGVVLGWPLWWVSACSVLVLLILEGVAVNFWLLRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 SV++GTDDDAPGLRLAV LC AA++AAV TGY WT DRDF DSR+VV +ATGMAE Sbjct 61 SVSLGTDDDAPGLRLAVALLCTAALAAAVATGYTHWTKTDRDFTDDSRKVVRIATGMAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 +ASFSP+AP A+DRA AM+VPEHA FKEQY KSSA+L + VTAQAAT++AGVEA+GP Sbjct 121 MASFSPTAPTDAIDRATAMVVPEHAAAFKEQYTKSSAELGQHKVTAQAATVSAGVEALGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 +AASVAVILRV+Q+ PGQP SQ A ALRVTLTKRGS WLV DV PI Sbjct 181 TAASVAVILRVTQNAPGQPPSQVAPALRVTLTKRGSDWLVADVLPI 226 >gi|108797139|ref|YP_637336.1| hypothetical protein Mmcs_0159 [Mycobacterium sp. MCS] gi|119866224|ref|YP_936176.1| hypothetical protein Mkms_0168 [Mycobacterium sp. KMS] gi|108767558|gb|ABG06280.1| putative conserved transmembrane protein [Mycobacterium sp. MCS] gi|119692313|gb|ABL89386.1| putative conserved transmembrane protein [Mycobacterium sp. KMS] Length=229 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 139/229 (61%), Positives = 173/229 (76%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN R++VFD+LAP+A IA L IG+ LGWPLWWVS CSVL LL+V+GV +N L+RRD Sbjct 1 MRNRLRVLVFDILAPVAAIAGLLYIGLALGWPLWWVSVCSVLCLLIVQGVIVNVALMRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 VTVGTDDD PGLRLAV+ L A+ AAV GY RWT PDR F DS EVV +A+ ++E Sbjct 61 GVTVGTDDDGPGLRLAVMGLATVAVVAAVALGYQRWTVPDRAFTADSAEVVRIASSVSEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 A+FSP +P A++DRAAA MVPE A FK+++A + L + V+AQA+T++AGVEAIGP Sbjct 121 TATFSPQSPTASIDRAAAQMVPERAQAFKDEFAGVAKQLTSKNVSAQASTVSAGVEAIGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 AASVAV+LR +QS+PGQP A ALRVTL+K W+V DVTPI+AR Sbjct 181 EAASVAVVLRGTQSVPGQPVDNAVLALRVTLSKTDGRWMVDDVTPIHAR 229 >gi|126432762|ref|YP_001068453.1| hypothetical protein Mjls_0149 [Mycobacterium sp. JLS] gi|126232562|gb|ABN95962.1| putative conserved transmembrane protein [Mycobacterium sp. JLS] Length=229 Score = 270 bits (691), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 138/229 (61%), Positives = 173/229 (76%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN R++VFD+L+P+A IA L IG+ LGWPLWWVS CSVL LL+V+GV +N L+RRD Sbjct 1 MRNRLRVLVFDILSPVAAIAGLLYIGLALGWPLWWVSVCSVLCLLIVQGVIVNVALMRRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 VTVGTDDD PGLRLAV+ L A+ AAV GY RWT PDR F DS EVV +A+ ++E Sbjct 61 GVTVGTDDDGPGLRLAVMGLATVAVVAAVALGYQRWTVPDRAFTADSAEVVRIASSVSEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 A+FSP +P A++DRAAA MVPE A FK+++A + L + V+AQA+T++AGVEAIGP Sbjct 121 TATFSPQSPTASIDRAAAQMVPERAQAFKDEFAGVAKQLTSKNVSAQASTVSAGVEAIGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 AASVAV+LR +QS+PGQP A ALRVTL+K W+V DVTPI+AR Sbjct 181 QAASVAVVLRGTQSVPGQPVDNAVLALRVTLSKTDGRWMVDDVTPIHAR 229 >gi|120401213|ref|YP_951042.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1] gi|119954031|gb|ABM11036.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii PYR-1] Length=229 Score = 238 bits (606), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 134/229 (59%), Positives = 162/229 (71%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN RL+ FDVLAP+A +AAL IGV LGWPLWWVS CSVL +LV EGV +NF L RRD Sbjct 1 MRNRLRLLAFDVLAPVAAVAALLYIGVALGWPLWWVSVCSVLCVLVAEGVVVNFVLARRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 +VTVGTDDD PGLRLAVV + AA+ A V GY +WT PDR DS EV +A+ +AE Sbjct 61 AVTVGTDDDGPGLRLAVVGVTTAALVGAAVVGYTQWTLPDRALRDDSAEVAGIASSVAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 A+F+P P A++DRA MM A FK ++A + DL R V+AQA+T++AGVEAIGP Sbjct 121 SATFTPQNPTASIDRAVGMMSAASAERFKNEFAAVAEDLGGRNVSAQASTVSAGVEAIGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 AASVAVILR +QS PGQ A ALRV L+K W+V DV PI++R Sbjct 181 DAASVAVILRGTQSTPGQRPDTAVLALRVALSKTDGRWIVEDVAPIHSR 229 >gi|333988803|ref|YP_004521417.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333484771|gb|AEF34163.1| transmembrane protein [Mycobacterium sp. JDM601] Length=237 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 124/228 (55%), Positives = 164/228 (72%), Gaps = 0/228 (0%) Query 2 RNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRDS 61 R WR++ FD+ APLA I L +G++L WPLWWVS CSVLVLL+VEG+ +NF LLRRD+ Sbjct 10 RTLWRVLAFDIAAPLAAIGGLLLVGLMLDWPLWWVSVCSVLVLLIVEGMVVNFLLLRRDA 69 Query 62 VTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETV 121 VTVGTDDD PGLR+ VV L A+A+ AA V GYLRWT PD++ DS EVV A MAE Sbjct 70 VTVGTDDDRPGLRMGVVALAASALVAAAVLGYLRWTVPDQELEADSGEVVKTAVAMAEAA 129 Query 122 ASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPS 181 A+ SP+ P A++++AA MVP+ F+E +++ ++A R + A L+AGVEA+GPS Sbjct 130 ATVSPANPDASIEKAATFMVPDRVNAFRESIGRTATEMANRNIAVDAQNLSAGVEALGPS 189 Query 182 AASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 AA VAV+LR Q++ Q QA +RVTLTKRG W+VL+++PI+AR Sbjct 190 AARVAVVLRSVQTVANQQVKQAVVPVRVTLTKRGGQWMVLEMSPIHAR 237 >gi|118472229|ref|YP_884651.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118173516|gb|ABK74412.1| putative conserved transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=229 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 135/229 (59%), Positives = 170/229 (75%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN R++ FDV APLA IAAL +G LGWP WWVS CS+L LL+V+GV +N L RD Sbjct 1 MRNRLRVLAFDVAAPLAAIAALVYLGAALGWPTWWVSVCSILCLLIVQGVVVNVVLACRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 VT+GTDDD PGLRLAVV + AA+ AAVV GYLRWT PD +FNRD +VV +A+ +AE Sbjct 61 GVTLGTDDDGPGLRLAVVGVATAALVAAVVVGYLRWTAPDDEFNRDREQVVRIASSVAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 A+F+P +P A++DRAAA M P+ A FK ++A + DL R V+AQA+T++AGVEA+GP Sbjct 121 TATFTPQSPTASIDRAAAQMAPDRAEAFKNEFATVAKDLTSRNVSAQASTVSAGVEALGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 AASVAV+LR +QS+PG+PT A ALRVTLTK WLV DV P ++R Sbjct 181 RAASVAVVLRGTQSVPGKPTDNAVLALRVTLTKSDGRWLVDDVRPAHSR 229 >gi|145221073|ref|YP_001131751.1| hypothetical protein Mflv_0469 [Mycobacterium gilvum PYR-GCK] gi|315441956|ref|YP_004074835.1| hypothetical protein Mspyr1_02860 [Mycobacterium sp. Spyr1] gi|145213559|gb|ABP42963.1| putative conserved transmembrane protein [Mycobacterium gilvum PYR-GCK] gi|315260259|gb|ADT97000.1| hypothetical protein Mspyr1_02860 [Mycobacterium sp. Spyr1] Length=229 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 132/229 (58%), Positives = 163/229 (72%), Gaps = 0/229 (0%) Query 1 MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRD 60 MRN WR++VFD+LAP A IAAL IGV L WPLWWV+ CSVL LL+VEGV +N L RRD Sbjct 1 MRNRWRVLVFDLLAPAAAIAALVYIGVALSWPLWWVAVCSVLCLLIVEGVVVNLVLARRD 60 Query 61 SVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAET 120 +VTVGTDD+ PGLRLAV AAA+ AA V GY+ WT PDR D+ EV +A+ +AE Sbjct 61 AVTVGTDDEGPGLRLAVAGTAAAAVVAAAVVGYVSWTVPDRVLRDDTAEVAGIASSVAEA 120 Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGP 180 A+F+P P ++DRAAAMM A FK ++A + DL R V+AQA T++AGVEAIGP Sbjct 121 SATFTPQNPTGSIDRAAAMMSAASAERFKSEFAAVAEDLGSRNVSAQARTVSAGVEAIGP 180 Query 181 SAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPINAR 229 AASVAVILR +QS PG+ A ALRV L+K W+V DV+PI++R Sbjct 181 DAASVAVILRGTQSAPGRRPDTAVLALRVALSKTDGRWVVEDVSPIHSR 229 >gi|169631608|ref|YP_001705257.1| hypothetical protein MAB_4534c [Mycobacterium abscessus ATCC 19977] gi|169243575|emb|CAM64603.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=237 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 93/226 (42%), Positives = 142/226 (63%), Gaps = 0/226 (0%) Query 2 RNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRDS 61 RN R+++FD+LAP+ T+ A+ +GV+L WP+WWV C+ + +L+VEG+A+N +L RRDS Sbjct 3 RNMLRVILFDLLAPVVTVLAIVELGVILRWPVWWVVVCTAVCVLIVEGMAVNAYLARRDS 62 Query 62 VTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETV 121 VTVGTDDD P LR +V L A++ A V GY RWT PDR+ N D V +A ++E V Sbjct 63 VTVGTDDDGPALRTGIVALATASVLAVAVVGYARWTLPDREGNADRAAVTDVAATVSEAV 122 Query 122 ASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPS 181 +F+P P +V +A M F + +++A+L +G++ Q ++ G+EA+GP Sbjct 123 VNFAPDNPDTSVRQATEHMTATQGQSFTRDFGRATAELKAKGISQQGEIVSVGIEALGPG 182 Query 182 AASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPIN 227 A +A ++R + Q+ ALR+TLTKR WLV ++ PI+ Sbjct 183 DAVMATLVRRTSVAAKTRPEQSVLALRLTLTKRDGRWLVDNIAPID 228 >gi|2384667|gb|AAB69855.1| orfH-200 [Mycobacterium tuberculosis H37Rv] Length=135 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 100/143 (70%), Positives = 101/143 (71%), Gaps = 23/143 (16%) Query 4 AWRLVVFDVLAPLATIAALAAIGVL------------LGWPLWWVSTCSVLVLLVVEGVA 51 AWRLVVFD LATIAALAAIGVL W WW Sbjct 2 AWRLVVFDAWHQLATIAALAAIGVLARLAPCGGFRRARCWCCWWSKVWQS---------- 51 Query 52 INFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVV 111 FWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVV Sbjct 52 -TFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVV 110 Query 112 HLATGMAETVASFSPSAPAAAVD 134 HLATGMAETVASFSPS +A D Sbjct 111 HLATGMAETVASFSPSEGSAQGD 133 >gi|342857621|ref|ZP_08714277.1| hypothetical protein MCOL_02055 [Mycobacterium colombiense CECT 3035] gi|342134954|gb|EGT88120.1| hypothetical protein MCOL_02055 [Mycobacterium colombiense CECT 3035] Length=223 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 45/162 (28%), Positives = 73/162 (46%), Gaps = 20/162 (12%) Query 71 PGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSR-EVVHLATGMAETVASFSPSAP 129 PGL V L A A+ GYL+W + R +R E V AT + S++P Sbjct 76 PGL----VMLLAGAV------GYLKWEQTNLSETRIARIESVQTATESTIKILSYNPDTV 125 Query 130 AAAVDRAAAMMVPEHAGGFKEQYAKSSADL-----ARRGVTAQAATLAAGVEAIGPSAAS 184 +D A + G F++ Y + + D+ ++ ++A A AA + PS A Sbjct 126 DHDLDAARDRL----TGKFRDAYTQLTHDVVIPGAKQKKISAVATVPAATSVSANPSHAV 181 Query 185 VAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 V V + + + P S A +RV++ + + WL+ D TPI Sbjct 182 VMVFVNQTIVVGNDPPSSTASTVRVSMDRHDNRWLISDFTPI 223 >gi|226361927|ref|YP_002779705.1| hypothetical protein ROP_25130 [Rhodococcus opacus B4] gi|226240412|dbj|BAH50760.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=256 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/118 (28%), Positives = 57/118 (49%), Gaps = 2/118 (1%) Query 111 VHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLAR-RGVTAQAA 169 V LA+ A + S++P +DRA+A++ + +++ A+ +GVT QA Sbjct 138 VQLASDGAAALLSYTPETVDEDLDRASALLTGDLLNSYRQLAGDVVGPTAKDKGVTMQAV 197 Query 170 TLAAGVEAIGPSAASVAVILRVSQSIPGQPT-SQAARALRVTLTKRGSGWLVLDVTPI 226 + A VE++ A V V + + ++ P SQ +RVTL+ WL+ P+ Sbjct 198 PVGAAVESVTTDTARVLVYVNQTTTMADTPEPSQTQNVVRVTLSHVDGNWLISGFDPL 255 >gi|145222155|ref|YP_001132833.1| hypothetical protein Mflv_1563 [Mycobacterium gilvum PYR-GCK] gi|145214641|gb|ABP44045.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=164 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 37/151 (25%), Positives = 64/151 (43%), Gaps = 2/151 (1%) Query 78 VFLCAAAISAAVVTGYLRWTTPDRDFNRDSR-EVVHLATGMAETVASFSPSAPAAAVDRA 136 + L ++ + V G+L W + D + +R E+ LA V F + Sbjct 14 IVLATGFVALSAVGGWLYWKGVELDGEQQARAELPALAEEQIPRVFGFDYQTVERSFAEV 73 Query 137 AAMMVPEHAGGFKEQYAKSSADLAR-RGVTAQAATLAAGVEAIGPSAASVAVILRVSQSI 195 M+ PE+ F+++ AR R + +QA T+ GV ++ASV V + + + Sbjct 74 YPMLTPEYRQEFQDRVTNEIIPQARDRELISQAHTVGTGVLDAHRTSASVMVYMNRTVTD 133 Query 196 PGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 + + LRV K WL+ +TPI Sbjct 134 KSKESVYDGSRLRVDYKKVDGKWLIAYITPI 164 >gi|118471039|ref|YP_887185.1| hypothetical protein MSMEG_2865 [Mycobacterium smegmatis str. MC2 155] gi|118172326|gb|ABK73222.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=190 Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust. Identities = 48/159 (31%), Positives = 75/159 (48%), Gaps = 12/159 (7%) Query 76 AVVFLCAAAISAAVVTG-YLRWTTPDRDFNRDS-REVVHLATGMAETVASFSPSAPAAAV 133 A+V + SAA+VT YL DR + ++ EVV A+ + S++P A + Sbjct 36 AIVVVGLLVSSAALVTVLYLTQYRIDRQTDTEAVDEVVAAASSGTVALLSYAPDTLEADL 95 Query 134 DRAAAMMVPEHAGGFKEQYAKSSADL-----ARRGVTAQAATLAAGVEAIGPSAASVAVI 188 A + M G F Y K ++D+ ++G+TA A + AG+ I P +A V V Sbjct 96 AGARSKMT----GDFLTYYGKFTSDVVAPAVQQKGITATAQIVRAGMMEIRPDSAKVLVF 151 Query 189 LRVSQSIPGQPT-SQAARALRVTLTKRGSGWLVLDVTPI 226 L S +P S A ++ V+LTK WL+ P+ Sbjct 152 LNQETSSKERPDPSLTASSVVVSLTKVDGNWLISAFDPV 190 >gi|120406143|ref|YP_955972.1| hypothetical protein Mvan_5195 [Mycobacterium vanbaalenii PYR-1] gi|119958961|gb|ABM15966.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=164 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 35/151 (24%), Positives = 62/151 (42%), Gaps = 2/151 (1%) Query 78 VFLCAAAISAAVVTGYLRWTTPDRDFNRDSR-EVVHLATGMAETVASFSPSAPAAAVDRA 136 V L ++ + V G L W + + +R E+ LA V F Sbjct 14 VLLATGFVALSAVGGALYWNRVELNGEEQARAELPSLAAQQIPLVFGFDYQTVERTFAEV 73 Query 137 AAMMVPEHAGGFKEQYAKSSADLAR-RGVTAQAATLAAGVEAIGPSAASVAVILRVSQSI 195 ++ PE+ F+++ AR R + +QA ++ AG+ ++ASV V + + + Sbjct 74 YPLLTPEYRKEFQDRVTNEIIPQARDRQLISQAHSVGAGILDAHRTSASVMVYMNRTVTD 133 Query 196 PGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 + + LRV K WL+ +TPI Sbjct 134 KAKESVYDGSRLRVDYKKVDGKWLIAYITPI 164 >gi|54022511|ref|YP_116753.1| hypothetical protein nfa5440 [Nocardia farcinica IFM 10152] gi|54014019|dbj|BAD55389.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=162 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 48/162 (30%), Positives = 75/162 (47%), Gaps = 14/162 (8%) Query 74 RLAVVFLCAA-AISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMA-ETVASFSPSAPAA 131 RL FL A A++A +V G+ W + + +RE A A + ++ + Sbjct 6 RLIASFLAGAVALTALIVIGFGGWRHWSSEQDEKAREQALTAADRAVSAMFTYDHTTVDT 65 Query 132 AVDRAAAMMVPEHAGGFKEQYAK-SSADLA----RRGVTAQAATLAAGVEAIGPSAASVA 186 + +AA + P F+E Y K +A +A + +T +A T AAG+ + A V Sbjct 66 ELPKAADNLSP----SFREDYLKLITAAIAPGAKEKQLTVKATTQAAGIVSADRDNAVVM 121 Query 187 VILR--VSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 + L + S Q T+ +R +RV L K G WLV VTPI Sbjct 122 LFLNQVTTSSDSPQGTTTGSR-VRVNLNKDGDRWLVDAVTPI 162 >gi|126437557|ref|YP_001073248.1| hypothetical protein Mjls_4993 [Mycobacterium sp. JLS] gi|126237357|gb|ABO00758.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=164 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/93 (35%), Positives = 43/93 (47%), Gaps = 3/93 (3%) Query 136 AAAMMVPEHAGGFKEQYAKSSADLAR-RGVTAQAATLAAGVEAIGPSAASVAVIL-RVSQ 193 A AM+ PE F+++ K AR R V +QA + GV +A V V L R Sbjct 73 AYAMLAPEFRQEFRDRATKDIIPQARERQVVSQANVVGVGVLDAQRDSAQVMVYLNRTVI 132 Query 194 SIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 G+P +R LRV K WL+ +TPI Sbjct 133 EKNGKPIYDGSR-LRVDYAKVDGRWLIDYITPI 164 >gi|111018910|ref|YP_701882.1| hypothetical protein RHA1_ro01913 [Rhodococcus jostii RHA1] gi|110818440|gb|ABG93724.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=171 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 48/174 (28%), Positives = 77/174 (45%), Gaps = 21/174 (12%) Query 68 DDAPGLRLAVVFLCAAAISAAVVTGYLRWTT--PDRDFNRDSR-EVVHLATGMAETVASF 124 D +P R ++ L A + AAV+ G L +T PDR + R V A+ A + ++ Sbjct 4 DASPKSRRLLLILGALTVVAAVLAGVLYFTLYRPDRRVDDAVRATVTDTASQGAIALLTY 63 Query 125 SPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADL----ARRGVTAQAATLAAGVEAIGP 180 P V A + G F + Y + + D+ A+ A AT+AA GP Sbjct 64 KPDTVENDVGTAKERLT----GEFLDYYTQFTTDVVVPAAKESQVATQATVAAS----GP 115 Query 181 ---SAASVAVILRVSQSIPGQPTSQAA---RALRVTLTKRGSGWLVLDVTPINA 228 +A + V+L V+Q+ +AA ++ V LTK G WL+ P+ + Sbjct 116 VEVAADTATVLLFVNQTTTSAAKPEAAVTATSITVELTKSGDNWLISGFDPVQS 169 >gi|315443160|ref|YP_004076039.1| hypothetical protein Mspyr1_15340 [Mycobacterium sp. Spyr1] gi|315261463|gb|ADT98204.1| hypothetical protein Mspyr1_15340 [Mycobacterium sp. Spyr1] Length=225 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 48/175 (28%), Positives = 77/175 (44%), Gaps = 35/175 (20%) Query 75 LAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLA--TGMAET-----------V 121 +A + L A+ A GYL+W + NRD V A +AET + Sbjct 63 VAFIVLPVIALVLAAGAGYLKWL---DNSNRDGSMSVGGAGRPSLAETSVQAARDGTIAL 119 Query 122 ASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPS 181 S++P + A ++ G F++ Y + D+ G + + A V P+ Sbjct 120 LSYAPDTVEQQLGAARELLT----GEFRDSYTSLTNDVVIPGAKEKQISAIATV----PA 171 Query 182 AASVAV-------ILRVSQSI---PGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 AASV+V +L V+Q++ P PT A+ ++RVTL K G WL+ P+ Sbjct 172 AASVSVTGEEAVVLLFVNQTVTMGPDAPTDTAS-SVRVTLEKDGDRWLISKFDPV 225 >gi|254818559|ref|ZP_05223560.1| hypothetical protein MintA_01484 [Mycobacterium intracellulare ATCC 13950] Length=216 Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust. Identities = 50/167 (30%), Positives = 71/167 (43%), Gaps = 16/167 (9%) Query 65 GTDDDAP----GLRLAVVFLCAAAISAAVVTG--YLRWTTPDRDFNRDSREVVHLATGMA 118 G DD P G R+ V AA I A V+ G Y W F ++V A Sbjct 47 GEDDQRPSKRKGRRVNVARWAAALILAVVLAGAGYEGWLL----FQHHQKDVAAAQALTA 102 Query 119 ETVASFS-PSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEA 177 + S A+D+ A ++ G FK+ Y KSSA L + + +AA V+A Sbjct 103 AKKYILALTSVDTNAIDKNFAEVLDGSTGEFKDMYTKSSAQLRQTLIDNKAAAHGNVVDA 162 Query 178 IGPSAAS--VAVILRVSQSIPG--QPTSQAARA-LRVTLTKRGSGWL 219 SA V V+L V QS+ P Q R+ +++T+ K WL Sbjct 163 AVQSATEDKVDVVLFVDQSVSNGAAPAPQLDRSRVKMTMEKVDGRWL 209 >gi|223984179|ref|ZP_03634329.1| hypothetical protein HOLDEFILI_01622 [Holdemania filiformis DSM 12042] gi|223963875|gb|EEF68237.1| hypothetical protein HOLDEFILI_01622 [Holdemania filiformis DSM 12042] Length=1632 Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/79 (33%), Positives = 40/79 (51%), Gaps = 3/79 (3%) Query 111 VHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGV---TAQ 167 V L ++ET+ S S PAA +++A A+ PE +K+Q DL R + A+ Sbjct 1298 VLLKQKLSETIVVLSRSDPAALLEKAQALFGPEWVSRYKDQLVCLHCDLTRPDLGLSAAE 1357 Query 168 AATLAAGVEAIGPSAASVA 186 A+L + I SAA V+ Sbjct 1358 RASLPTSLTCIVHSAAEVS 1376 >gi|118470007|ref|YP_885288.1| hypothetical protein MSMEG_0885 [Mycobacterium smegmatis str. MC2 155] gi|118171294|gb|ABK72190.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=167 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/120 (25%), Positives = 56/120 (47%), Gaps = 3/120 (2%) Query 109 EVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLAR-RGVTAQ 167 EV + E + S++P + A+++ + A +++ ++ +AR GVT Sbjct 49 EVTQFVSDNLEKLLSYTPRTDDTDIADLASVLSGKAADTYRDDM-RTKLSVARTNGVTQT 107 Query 168 AATLAAGVEAI-GPSAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 + VE++ +AA +A + + S Q SQ+ A+RV L K G W + + P+ Sbjct 108 STIRQTAVESLTDDTAAVLAFVDQTVASTGNQTRSQSGYAMRVGLRKSGGAWTIEALEPL 167 >gi|118464121|ref|YP_880215.1| hypothetical protein MAV_0955 [Mycobacterium avium 104] gi|118165408|gb|ABK66305.1| conserved hypothetical protein [Mycobacterium avium 104] Length=201 Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/112 (28%), Positives = 52/112 (47%), Gaps = 9/112 (8%) Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLA----RRGVTAQAATLAAGVE 176 V S++P + ++R A G F Y K + +A ++ VT A + A V Sbjct 94 VLSYAPES----LNRDFAKAQSYLTGDFLAYYTKFTEQIAALAQQKQVTETAKVVRAAVS 149 Query 177 AIGPSAASVAVILRVSQSIPGQPTSQA-ARALRVTLTKRGSGWLVLDVTPIN 227 + P +A V V + + + +P Q A + RVTLTK WL+ + P++ Sbjct 150 ELHPDSAVVLVFINQTATSKQKPEPQTTASSARVTLTKVKGSWLISKLDPLS 201 >gi|254773844|ref|ZP_05215360.1| hypothetical protein MaviaA2_04087 [Mycobacterium avium subsp. avium ATCC 25291] Length=149 Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust. Identities = 26/87 (30%), Positives = 42/87 (49%), Gaps = 5/87 (5%) Query 146 GGFKEQYAKSSADLA----RRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQPTS 201 G F Y K + +A ++ VT A + A V + P +A V V + + + +P Sbjct 63 GDFLAYYTKFTEQIAALAQQKQVTETAKVVRAAVSELHPDSAVVLVFINQTATSKQKPEP 122 Query 202 QA-ARALRVTLTKRGSGWLVLDVTPIN 227 Q A + RVTLTK WL+ + P++ Sbjct 123 QTTASSARVTLTKVKGSWLISKLDPLS 149 >gi|336461214|gb|EGO40090.1| hypothetical protein MAPs_32990 [Mycobacterium avium subsp. paratuberculosis S397] Length=201 Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust. Identities = 31/112 (28%), Positives = 52/112 (47%), Gaps = 9/112 (8%) Query 121 VASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLA----RRGVTAQAATLAAGVE 176 V S++P + ++R A G F Y K + +A ++ VT A + A V Sbjct 94 VLSYAPES----LNRDFAKAQSYLTGDFLAYYTKFTEQIAALAQQKQVTETAKVVRAAVS 149 Query 177 AIGPSAASVAVILRVSQSIPGQPTSQA-ARALRVTLTKRGSGWLVLDVTPIN 227 + P +A V V + + + +P Q A + RVTLTK WL+ + P++ Sbjct 150 ELHPDSAVVLVFINQTATSKQKPEPQTTASSARVTLTKVKGSWLISKLDPLS 201 >gi|41406865|ref|NP_959701.1| hypothetical protein MAP0767c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395215|gb|AAS03084.1| hypothetical protein MAP_0767c [Mycobacterium avium subsp. paratuberculosis K-10] Length=224 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 26/87 (30%), Positives = 42/87 (49%), Gaps = 5/87 (5%) Query 146 GGFKEQYAKSSADLA----RRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQPTS 201 G F Y K + +A ++ VT A + A V + P +A V V + + + +P Sbjct 138 GDFLAYYTKFTEQIAALAQQKQVTETAKVVRAAVSELHPDSAVVLVFINQTATSKQKPEP 197 Query 202 QA-ARALRVTLTKRGSGWLVLDVTPIN 227 Q A + RVTLTK WL+ + P++ Sbjct 198 QTTASSARVTLTKVKGSWLISKLDPLS 224 >gi|118462794|ref|YP_881731.1| hypothetical protein MAV_2539 [Mycobacterium avium 104] gi|118164081|gb|ABK64978.1| conserved hypothetical protein [Mycobacterium avium 104] Length=199 Score = 35.8 bits (81), Expect = 4.5, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 66/152 (44%), Gaps = 8/152 (5%) Query 80 LCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAM 139 L +A+ AV TG+L+W ++R + E+ +A +VA S D AA Sbjct 51 LPISALLIAVATGFLKWQAASNLWSR-AAEIESVAAAKDSSVAILSYQPDTVEKDLGAAR 109 Query 140 MVPEHAGGFKEQYAKSSADL-----ARRGVTAQAATLAAGVEAIGPSAASVAVILRVSQS 194 G FK+ Y + D+ + ++A A AA + P+ A V + + + Sbjct 110 --DRLTGKFKDSYTELVHDVVIPGAKKDHISAVATVPAAASVSANPNHAVALVYVNQTVT 167 Query 195 IPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 + + A +RVT+ K G+ WL+ P+ Sbjct 168 VGNDAPTDTASTVRVTMDKIGNRWLISAFDPV 199 >gi|342860193|ref|ZP_08716845.1| hypothetical protein MCOL_14980 [Mycobacterium colombiense CECT 3035] gi|342132571|gb|EGT85800.1| hypothetical protein MCOL_14980 [Mycobacterium colombiense CECT 3035] Length=225 Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust. Identities = 31/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%) Query 127 SAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAA--S 184 S A+D+ A ++ G FK+ Y KSSA L + + +AA + ++A SA Sbjct 121 SVDTNAIDKNFADVLDGSTGEFKDMYTKSSAQLRQTLIDNKAAAHGSVIDAAVQSATGDK 180 Query 185 VAVILRVSQSIPG--QPTSQAARA-LRVTLTKRGSGWL 219 V V+L V QS+ P Q R+ +++T+ K WL Sbjct 181 VDVVLFVDQSVSNGAAPAPQLDRSRVKMTMEKVDGRWL 218 >gi|118462494|ref|YP_879395.1| hypothetical protein MAV_0098 [Mycobacterium avium 104] gi|118163781|gb|ABK64678.1| conserved hypothetical protein [Mycobacterium avium 104] Length=229 Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust. Identities = 32/98 (33%), Positives = 48/98 (49%), Gaps = 5/98 (5%) Query 127 SAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAAS-- 184 S A+D+ A ++ G FK+ Y KSSA L + + +AA V+A SA Sbjct 125 SVDTNAIDKNFAEVLDGSTGEFKDMYTKSSAQLRQTLIDNKAAAHGNVVDAAVRSATEDK 184 Query 185 VAVILRVSQSIPG--QPTSQAARA-LRVTLTKRGSGWL 219 V V+L V QS+ P Q R+ +++T+ K WL Sbjct 185 VEVVLFVDQSVSNGAAPAPQLDRSRVKMTMEKVDGRWL 222 >gi|254773144|ref|ZP_05214660.1| hypothetical protein MaviaA2_00461 [Mycobacterium avium subsp. avium ATCC 25291] Length=229 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 32/98 (33%), Positives = 48/98 (49%), Gaps = 5/98 (5%) Query 127 SAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAAS-- 184 S A+D+ A ++ G FK+ Y KSSA L + + +AA V+A SA Sbjct 125 SVDTNAIDKNFAEVLDGSTGEFKDMYTKSSAQLRQTLIDNKAAAHGHVVDAAVRSATEDK 184 Query 185 VAVILRVSQSIPG--QPTSQAARA-LRVTLTKRGSGWL 219 V V+L V QS+ P Q R+ +++T+ K WL Sbjct 185 VEVVLFVDQSVSNGAAPAPQLDRSRVKMTMEKVDGRWL 222 >gi|254819945|ref|ZP_05224946.1| hypothetical protein MintA_08471 [Mycobacterium intracellulare ATCC 13950] Length=233 Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust. Identities = 39/152 (26%), Positives = 65/152 (43%), Gaps = 8/152 (5%) Query 80 LCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAM 139 L +A+ AV TG+L+W +R + E+ +A +VA S D AA Sbjct 85 LPISALLIAVATGFLKWQAASNLLSR-AAEIESVAAAKDSSVAILSYRPDTVEKDLGAAR 143 Query 140 MVPEHAGGFKEQYAKSSADL-----ARRGVTAQAATLAAGVEAIGPSAASVAVILRVSQS 194 G FK+ Y + D+ + ++A A AA + P+ A V + + S Sbjct 144 --DRLTGKFKDSYTQLVQDVVIPGAKKDHISAVATVPAAASVSANPNHAVALVYVDQTVS 201 Query 195 IPGQPTSQAARALRVTLTKRGSGWLVLDVTPI 226 + + A +RVT+ K G+ WL+ P+ Sbjct 202 VGNDAPTDTASTVRVTMDKVGNRWLISAFDPV 233 >gi|108801051|ref|YP_641248.1| hypothetical protein Mmcs_4087 [Mycobacterium sp. MCS] gi|119870193|ref|YP_940145.1| hypothetical protein Mkms_4163 [Mycobacterium sp. KMS] gi|126436888|ref|YP_001072579.1| hypothetical protein Mjls_4317 [Mycobacterium sp. JLS] gi|108771470|gb|ABG10192.1| hypothetical protein Mmcs_4087 [Mycobacterium sp. MCS] gi|119696282|gb|ABL93355.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236688|gb|ABO00089.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=206 Score = 35.0 bits (79), Expect = 8.5, Method: Compositional matrix adjust. Identities = 40/149 (27%), Positives = 67/149 (45%), Gaps = 18/149 (12%) Query 88 AVVTGYLRWTTPDRDFNRDSRE-VVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAG 146 AV GYL W D +RE V A +A ++ ++ P + V++ + G Sbjct 66 AVAGGYLFWRNYTADAAEQAREDSVAAARSIAISMLTYEPQS----VEQQLGAAKEQLTG 121 Query 147 GFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVA-------VILRVSQSIP--G 197 F++ Y+ + G + + V P+AASV+ V+L V+Q++ Sbjct 122 TFRDTYSSLIDTVVVPGAKERQISAVTDV----PAAASVSAEPDHAVVLLFVNQTVTVGS 177 Query 198 QPTSQAARALRVTLTKRGSGWLVLDVTPI 226 +P + A ++RVTL K G W V + PI Sbjct 178 EPPTNTASSVRVTLDKVGDHWRVSEFQPI 206 Lambda K H 0.322 0.131 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 297403917052 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40