BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0203 Length=136 Score E Sequences producing significant alignments: (Bits) Value gi|15607344|ref|NP_214717.1| hypothetical protein Rv0203 [Mycoba... 270 5e-71 gi|121636115|ref|YP_976338.1| hypothetical protein BCG_0240 [Myc... 268 3e-70 gi|289568105|ref|ZP_06448332.1| hypothetical exported protein [M... 267 4e-70 gi|326634343|pdb|3MAY|A Chain A, Crystal Structure Of A Secreted... 206 7e-52 gi|296167421|ref|ZP_06849822.1| conserved hypothetical protein [... 193 7e-48 gi|183980474|ref|YP_001848765.1| exported protein [Mycobacterium... 182 1e-44 gi|118616822|ref|YP_905154.1| exported protein [Mycobacterium ul... 182 1e-44 gi|342859341|ref|ZP_08715995.1| hypothetical protein MCOL_10693 ... 181 3e-44 gi|254777411|ref|ZP_05218927.1| hypothetical protein MaviaA2_224... 167 7e-40 gi|41409736|ref|NP_962572.1| hypothetical protein MAP3638 [Mycob... 166 9e-40 gi|240172090|ref|ZP_04750749.1| exported protein [Mycobacterium ... 152 2e-35 gi|118471449|ref|YP_884657.1| hypothetical protein MSMEG_0242 [M... 125 1e-27 gi|120401216|ref|YP_951045.1| Fis family transcriptional regulat... 120 8e-26 gi|126432766|ref|YP_001068457.1| hypothetical protein Mjls_0153 ... 117 8e-25 gi|108797143|ref|YP_637340.1| hypothetical protein Mmcs_0163 [My... 117 8e-25 gi|145221067|ref|YP_001131745.1| Fis family transcriptional regu... 114 6e-24 gi|118469251|ref|YP_890163.1| hypothetical protein MSMEG_5936 [M... 68.2 4e-10 gi|41409341|ref|NP_962177.1| hypothetical protein MAP3243 [Mycob... 67.8 5e-10 gi|41408070|ref|NP_960906.1| hypothetical protein MAP1972c [Myco... 67.4 8e-10 gi|315442556|ref|YP_004075435.1| hypothetical protein Mspyr1_090... 67.0 8e-10 gi|145222117|ref|YP_001132795.1| hypothetical protein Mflv_1525 ... 67.0 8e-10 gi|120406180|ref|YP_956009.1| hypothetical protein Mvan_5232 [My... 67.0 8e-10 gi|336461831|gb|EGO40687.1| hypothetical protein MAPs_26670 [Myc... 67.0 9e-10 gi|108800335|ref|YP_640532.1| hypothetical protein Mmcs_3369 [My... 67.0 1e-09 gi|342861100|ref|ZP_08717749.1| hypothetical protein MCOL_19552 ... 66.6 1e-09 gi|296169140|ref|ZP_06850796.1| conserved hypothetical protein [... 66.6 1e-09 gi|118618562|ref|YP_906894.1| hypothetical protein MUL_3206 [Myc... 66.2 2e-09 gi|118466079|ref|YP_881442.1| hypothetical protein MAV_2237 [Myc... 65.9 2e-09 gi|254822546|ref|ZP_05227547.1| hypothetical protein MintA_21634... 65.5 2e-09 gi|183982565|ref|YP_001850856.1| hypothetical protein MMAR_2554 ... 65.1 4e-09 gi|254774927|ref|ZP_05216443.1| hypothetical protein MaviaA2_096... 63.9 8e-09 gi|342857241|ref|ZP_08713897.1| hypothetical protein MCOL_00145 ... 60.8 7e-08 gi|254819829|ref|ZP_05224830.1| hypothetical protein MintA_07889... 59.7 1e-07 gi|169631078|ref|YP_001704727.1| hypothetical protein MAB_3999 [... 58.5 3e-07 gi|120406697|ref|YP_956526.1| hypothetical protein Mvan_5755 [My... 58.5 3e-07 gi|108802142|ref|YP_642339.1| hypothetical protein Mmcs_5179 [My... 58.2 4e-07 gi|169629010|ref|YP_001702659.1| hypothetical protein MAB_1922 [... 57.8 5e-07 gi|315441595|ref|YP_004074472.1| hypothetical protein Mspyr1_548... 57.4 7e-07 gi|118473055|ref|YP_890791.1| hypothetical protein MSMEG_6579 [M... 57.0 8e-07 gi|315441600|ref|YP_004074477.1| hypothetical protein Mspyr1_549... 56.6 1e-06 gi|183984332|ref|YP_001852623.1| hypothetical protein MMAR_4361 ... 55.8 2e-06 gi|118471775|ref|YP_889359.1| hypothetical protein MSMEG_5111 [M... 55.8 2e-06 gi|183981204|ref|YP_001849495.1| exported protein [Mycobacterium... 55.5 3e-06 gi|296166108|ref|ZP_06848553.1| conserved hypothetical protein [... 55.5 3e-06 gi|118617107|ref|YP_905439.1| exported protein [Mycobacterium ul... 55.1 3e-06 gi|169631602|ref|YP_001705251.1| hypothetical protein MAB_4528c ... 54.3 5e-06 gi|118473225|ref|YP_889736.1| hypothetical protein MSMEG_5498 [M... 53.5 1e-05 gi|145222400|ref|YP_001133078.1| hypothetical protein Mflv_1810 ... 53.5 1e-05 gi|333989617|ref|YP_004522231.1| hypothetical protein JDM601_097... 52.4 2e-05 gi|108797144|ref|YP_637341.1| hypothetical protein Mmcs_0164 [My... 52.4 2e-05 >gi|15607344|ref|NP_214717.1| hypothetical protein Rv0203 [Mycobacterium tuberculosis H37Rv] gi|15839583|ref|NP_334620.1| hypothetical protein MT0213 [Mycobacterium tuberculosis CDC1551] gi|31791381|ref|NP_853874.1| hypothetical protein Mb0209 [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=136 Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY Sbjct 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS Sbjct 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 Query 121 GLQAIGLMQAVQGARR 136 GLQAIGLMQAVQGARR Sbjct 121 GLQAIGLMQAVQGARR 136 >gi|121636115|ref|YP_976338.1| hypothetical protein BCG_0240 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988588|ref|YP_002643275.1| hypothetical protein JTY_0209 [Mycobacterium bovis BCG str. Tokyo 172] gi|121491762|emb|CAL70224.1| Possible exported protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771701|dbj|BAH24507.1| hypothetical protein JTY_0209 [Mycobacterium bovis BCG str. Tokyo 172] gi|341600131|emb|CCC62800.1| possible exported protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=136 Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY Sbjct 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LDSHPETNQVMTAVLQQQVGPGSVASL AHFEANPKVASDLHALSQPLTDLSTRCSLPIS Sbjct 61 LDSHPETNQVMTAVLQQQVGPGSVASLTAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 Query 121 GLQAIGLMQAVQGARR 136 GLQAIGLMQAVQGARR Sbjct 121 GLQAIGLMQAVQGARR 136 >gi|289568105|ref|ZP_06448332.1| hypothetical exported protein [Mycobacterium tuberculosis T17] gi|289541858|gb|EFD45507.1| hypothetical exported protein [Mycobacterium tuberculosis T17] Length=136 Score = 267 bits (683), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY Sbjct 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LDSHPETNQVMTAVLQQQVGPGSVASLKAH EANPKVASDLHALSQPLTDLSTRCSLPIS Sbjct 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHLEANPKVASDLHALSQPLTDLSTRCSLPIS 120 Query 121 GLQAIGLMQAVQGARR 136 GLQAIGLMQAVQGARR Sbjct 121 GLQAIGLMQAVQGARR 136 >gi|326634343|pdb|3MAY|A Chain A, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein gi|326634344|pdb|3MAY|B Chain B, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein gi|326634345|pdb|3MAY|C Chain C, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein gi|326634346|pdb|3MAY|D Chain D, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein gi|326634347|pdb|3MAY|E Chain E, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein gi|326634348|pdb|3MAY|G Chain G, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein gi|326634349|pdb|3MAY|F Chain F, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein gi|326634350|pdb|3MAY|H Chain H, Crystal Structure Of A Secreted Mycobacterium Tuberculosis Heme- Binding Protein Length=101 Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 101/101 (100%), Positives = 101/101 (100%), Gaps = 0/101 (0%) Query 36 GASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANP 95 GASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANP Sbjct 1 GASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANP 60 Query 96 KVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR 136 KVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR Sbjct 61 KVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR 101 >gi|296167421|ref|ZP_06849822.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897230|gb|EFG76835.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=181 Score = 193 bits (490), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 93/134 (70%), Positives = 114/134 (86%), Gaps = 0/134 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M G+AT RRR++A LIA A+PGAA+ALLA P ATGASDPCAASEVART+GSV+KSMGDY Sbjct 1 MTRGSATGRRRIVAGLIATAVPGAALALLAGPPATGASDPCAASEVARTIGSVSKSMGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LD+HPETNQ MT++LQQQ GP S+ LK++FEANPKVA D+ +++QPLT+LS +C LPIS Sbjct 61 LDAHPETNQTMTSMLQQQAGPQSMTGLKSYFEANPKVAGDMTSIAQPLTNLSLQCKLPIS 120 Query 121 GLQAIGLMQAVQGA 134 QA+G+MQ QGA Sbjct 121 PSQAMGMMQQAQGA 134 >gi|183980474|ref|YP_001848765.1| exported protein [Mycobacterium marinum M] gi|183173800|gb|ACC38910.1| exported protein [Mycobacterium marinum M] Length=169 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 89/132 (68%), Positives = 104/132 (79%), Gaps = 0/132 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK+G AT RR L A L+A+ LPG A+ +AEP+ATGA+DPCAASEVART+GSVAK GDY Sbjct 1 MKSGNATKRRGLFAALVAVGLPGLALVTVAEPTATGATDPCAASEVARTIGSVAKQTGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LDSHPETNQ MTA Q GP S SLK++ E NPKVASDL +LSQPLT+LST+C LPI+ Sbjct 61 LDSHPETNQAMTAAFQGSAGPQSFGSLKSYLEKNPKVASDLQSLSQPLTNLSTQCRLPIT 120 Query 121 GLQAIGLMQAVQ 132 QA+GL QA Q Sbjct 121 LSQAVGLAQAAQ 132 >gi|118616822|ref|YP_905154.1| exported protein [Mycobacterium ulcerans Agy99] gi|118568932|gb|ABL03683.1| exported protein [Mycobacterium ulcerans Agy99] Length=169 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 89/132 (68%), Positives = 104/132 (79%), Gaps = 0/132 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK+G AT RR L A L+A+ LPG A+ +AEP+ATGA+DPCAASEVART+GSVAK GDY Sbjct 1 MKSGNATKRRGLFAALVAVGLPGLALVTVAEPTATGATDPCAASEVARTIGSVAKQTGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LDSHPETNQ MTA Q GP S SLK++ E NPKVASDL +LSQPLT+LST+C LPI+ Sbjct 61 LDSHPETNQAMTAAFQGSAGPQSFGSLKSYLEKNPKVASDLQSLSQPLTNLSTQCRLPIT 120 Query 121 GLQAIGLMQAVQ 132 QA+GL QA Q Sbjct 121 LSQAVGLAQAAQ 132 >gi|342859341|ref|ZP_08715995.1| hypothetical protein MCOL_10693 [Mycobacterium colombiense CECT 3035] gi|342133582|gb|EGT86785.1| hypothetical protein MCOL_10693 [Mycobacterium colombiense CECT 3035] Length=183 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 91/134 (68%), Positives = 107/134 (80%), Gaps = 0/134 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M TA RR+ A LIA +PG AVA+LA ATGA+DPCAASEVART+GSV+KSMGDY Sbjct 1 MTRATAGRGRRIFAGLIAATVPGVAVAVLAGAPATGANDPCAASEVARTIGSVSKSMGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LDSHPETNQ MT++LQQQ GP SV LK++FEANPKVA D+ +++QPLT LST+C LPIS Sbjct 61 LDSHPETNQTMTSMLQQQAGPQSVNGLKSYFEANPKVAGDMTSIAQPLTTLSTQCKLPIS 120 Query 121 GLQAIGLMQAVQGA 134 QA+GLMQ QGA Sbjct 121 IPQAMGLMQQAQGA 134 >gi|254777411|ref|ZP_05218927.1| hypothetical protein MaviaA2_22471 [Mycobacterium avium subsp. avium ATCC 25291] Length=135 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 90/134 (68%), Positives = 111/134 (83%), Gaps = 0/134 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M + +A RRR+ A LIA ALPGAAVA+LA P ATGA+DPCAASEVART+GSV+KSMGDY Sbjct 1 MTSASAGRRRRIFAGLIAAALPGAAVAVLAGPPATGANDPCAASEVARTIGSVSKSMGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LD+HPETNQ MT++LQQQ GP SV LK++F+ANPKVA D+ +++QPLT LS +C LPIS Sbjct 61 LDAHPETNQAMTSMLQQQAGPQSVNGLKSYFDANPKVAGDMTSIAQPLTSLSLQCKLPIS 120 Query 121 GLQAIGLMQAVQGA 134 QA+G++Q QGA Sbjct 121 IPQALGMVQQAQGA 134 >gi|41409736|ref|NP_962572.1| hypothetical protein MAP3638 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462996|ref|YP_884092.1| hypothetical protein MAV_4971 [Mycobacterium avium 104] gi|41398568|gb|AAS06188.1| hypothetical protein MAP_3638 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164283|gb|ABK65180.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336460056|gb|EGO38965.1| hypothetical protein MAPs_44380 [Mycobacterium avium subsp. paratuberculosis S397] Length=181 Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 90/134 (68%), Positives = 111/134 (83%), Gaps = 0/134 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M + +A RRR+ A LIA ALPGAAVA+LA P ATGA+DPCAASEVART+GSV+KSMGDY Sbjct 1 MTSASAGRRRRIFAGLIAAALPGAAVAVLAGPPATGANDPCAASEVARTIGSVSKSMGDY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 LD+HPETNQ MT++LQQQ GP SV LK++F+ANPKVA D+ +++QPLT LS +C LPIS Sbjct 61 LDAHPETNQAMTSMLQQQAGPQSVNGLKSYFDANPKVAGDMTSIAQPLTSLSLQCKLPIS 120 Query 121 GLQAIGLMQAVQGA 134 QA+G++Q QGA Sbjct 121 IPQALGMVQQAQGA 134 >gi|240172090|ref|ZP_04750749.1| exported protein [Mycobacterium kansasii ATCC 12478] Length=134 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/126 (62%), Positives = 94/126 (75%), Gaps = 3/126 (2%) Query 12 LLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVM 71 + LIA+ LP A+ + A PSATGA+DPCAASEVART+GSVAK GDYLDSHPETNQ + Sbjct 1 MFVALIAVGLPATALVVPAGPSATGATDPCAASEVARTIGSVAKQTGDYLDSHPETNQAV 60 Query 72 TAVLQQQVGP---GSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLM 128 TA LQQ G GS+ASLK +FE NPK A DL +L+ PLT+LS +C LP++ QA+ L Sbjct 61 TAALQQPAGSESLGSLASLKGYFERNPKAAGDLQSLAHPLTNLSMQCKLPVTFPQALNLA 120 Query 129 QAVQGA 134 QA QGA Sbjct 121 QAAQGA 126 >gi|118471449|ref|YP_884657.1| hypothetical protein MSMEG_0242 [Mycobacterium smegmatis str. MC2 155] gi|118172736|gb|ABK73632.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=193 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/120 (57%), Positives = 87/120 (73%), Gaps = 0/120 (0%) Query 9 RRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSHPETN 68 RR L V +A A+ GAA A L PSAT A+DPCAASEVARTVG VA GDYLD +P+TN Sbjct 17 RRTLGTVFVATAVGGAATAALLGPSATAATDPCAASEVARTVGKVATDTGDYLDENPQTN 76 Query 69 QVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLM 128 Q +T + +QQ GP ++AS+K + +ANP+VA DL L QPLT L T+C LP++ Q +GL+ Sbjct 77 QALTTISKQQAGPATLASIKTYLDANPQVAKDLQRLQQPLTALGTKCQLPVTLPQLLGLV 136 >gi|120401216|ref|YP_951045.1| Fis family transcriptional regulator [Mycobacterium vanbaalenii PYR-1] gi|119954034|gb|ABM11039.1| transcriptional regulator, Fis family [Mycobacterium vanbaalenii PYR-1] Length=140 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 62/107 (58%), Positives = 76/107 (72%), Gaps = 1/107 (0%) Query 26 VALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVA 85 V L A P A A DPCAASEVARTV VA G+YL+++PE N+ +T + QQQ GP SVA Sbjct 18 VMLTATP-AGAAPDPCAASEVARTVAEVATYTGNYLEANPEANRAITTISQQQGGPQSVA 76 Query 86 SLKAHFEANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQ 132 +LK +F+ANPKVA+DL L QPL LS +C LP++ Q GLMQA Q Sbjct 77 ALKTYFDANPKVAADLQRLQQPLAALSGKCKLPLTLPQVFGLMQAAQ 123 >gi|126432766|ref|YP_001068457.1| hypothetical protein Mjls_0153 [Mycobacterium sp. JLS] gi|126232566|gb|ABN95966.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=159 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 54/95 (57%), Positives = 73/95 (77%), Gaps = 0/95 (0%) Query 34 ATGASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEA 93 AT A DPCAAS+VA+TV +VA + +YL ++PET+Q +T + QQQ GP S+ASLKA+ +A Sbjct 39 ATAAPDPCAASQVAKTVAAVATNTSNYLAANPETDQALTTIAQQQAGPASLASLKAYLDA 98 Query 94 NPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLM 128 NP+V SD+ L QPLT+LS RC LP++ Q +GLM Sbjct 99 NPQVGSDMQKLQQPLTNLSGRCKLPVTIPQVLGLM 133 >gi|108797143|ref|YP_637340.1| hypothetical protein Mmcs_0163 [Mycobacterium sp. MCS] gi|119866228|ref|YP_936180.1| hypothetical protein Mkms_0172 [Mycobacterium sp. KMS] gi|108767562|gb|ABG06284.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692317|gb|ABL89390.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=162 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 54/95 (57%), Positives = 73/95 (77%), Gaps = 0/95 (0%) Query 34 ATGASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEA 93 AT A DPCAAS+VA+TV +VA + +YL ++PET+Q +T + QQQ GP S+ASLKA+ +A Sbjct 39 ATAAPDPCAASQVAKTVAAVATNTSNYLAANPETDQALTTIAQQQAGPASLASLKAYLDA 98 Query 94 NPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLM 128 NP+V SD+ L QPLT+LS RC LP++ Q +GLM Sbjct 99 NPQVGSDMQKLQQPLTNLSGRCKLPVTIPQVLGLM 133 >gi|145221067|ref|YP_001131745.1| Fis family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|315441962|ref|YP_004074841.1| hypothetical protein Mspyr1_02920 [Mycobacterium sp. Spyr1] gi|145213553|gb|ABP42957.1| transcriptional regulator, fis family [Mycobacterium gilvum PYR-GCK] gi|315260265|gb|ADT97006.1| hypothetical protein Mspyr1_02920 [Mycobacterium sp. Spyr1] Length=144 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/101 (58%), Positives = 72/101 (72%), Gaps = 1/101 (0%) Query 32 PSATGASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHF 91 PSA+ A DPCAASEVARTV VA G+YL+++P+ N +T++ QQ GP SVA+LK +F Sbjct 29 PSASAAPDPCAASEVARTVAEVATYTGNYLEANPKANTALTSI-SQQGGPESVAALKTYF 87 Query 92 EANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQ 132 +ANPKVASDL L PL LS C LP++ Q GLMQA Q Sbjct 88 DANPKVASDLQRLQAPLVTLSGTCRLPVTLPQIFGLMQAAQ 128 >gi|118469251|ref|YP_890163.1| hypothetical protein MSMEG_5936 [Mycobacterium smegmatis str. MC2 155] gi|118170538|gb|ABK71434.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=127 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/122 (35%), Positives = 63/122 (52%), Gaps = 8/122 (6%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK +A T RR L + A + A + P A D C+ S +A TV SVA S Y Sbjct 1 MKKMSARTVRRCLYGMCAGGVLSAGFTI---PMANAEPDQCSESGIASTVSSVAASTSTY 57 Query 61 LDSHPETNQVMTAVLQQQVGPGSVAS--LKAHFEANPKVASDLHALSQPLTDLSTRCSLP 118 L +HPE ++ +T + +Q P A + F NP+V DL ++QP+ DL T+C + Sbjct 58 LTAHPEADRALTDIARQ---PDDRADDLYRTFFAGNPQVTQDLQKINQPVVDLHTQCGID 114 Query 119 IS 120 ++ Sbjct 115 VT 116 >gi|41409341|ref|NP_962177.1| hypothetical protein MAP3243 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465779|ref|YP_883230.1| hypothetical protein MAV_4079 [Mycobacterium avium 104] gi|254776501|ref|ZP_05218017.1| hypothetical protein MaviaA2_17779 [Mycobacterium avium subsp. avium ATCC 25291] gi|41398161|gb|AAS05791.1| hypothetical protein MAP_3243 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167066|gb|ABK67963.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336459299|gb|EGO38242.1| hypothetical protein MAPs_03980 [Mycobacterium avium subsp. paratuberculosis S397] Length=132 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/117 (35%), Positives = 64/117 (55%), Gaps = 2/117 (1%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK + RR++ V L G A+ ++ PSA A D C+ S V TV +V S Y Sbjct 1 MKISSIVARRKVAGVSAGCLLGGMAMGIVGAPSAAAAPD-CSPSGVNSTVSAVEGSAQQY 59 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 L +HP+ NQV+TA Q P + +SL+++F +P+ +DL + P+ D +C++ Sbjct 60 LAAHPDANQVVTAAYGQPR-PQAESSLRSYFTGHPQEYNDLRGILAPIGDTERQCNV 115 >gi|41408070|ref|NP_960906.1| hypothetical protein MAP1972c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396425|gb|AAS04289.1| hypothetical protein MAP_1972c [Mycobacterium avium subsp. paratuberculosis K-10] Length=123 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 44/113 (39%), Positives = 60/113 (54%), Gaps = 2/113 (1%) Query 4 GTATTRRRLLAVLIALALPGAAVALLAEPSATGASDP-CAASEVARTVGSVAKSMGDYLD 62 G A T L+A L+ A P AA + +P AS P C A+++A+ VA + YL Sbjct 11 GVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAGVAAATSAYLF 70 Query 63 SHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 SHP+ N T+ L+ Q A LK + +ANP+ SDL + QPLTD RC Sbjct 71 SHPDVNAYFTS-LKGQPRDEMRAQLKQYMDANPQTHSDLEGIRQPLTDFQDRC 122 >gi|315442556|ref|YP_004075435.1| hypothetical protein Mspyr1_09090 [Mycobacterium sp. Spyr1] gi|315260859|gb|ADT97600.1| hypothetical protein Mspyr1_09090 [Mycobacterium sp. Spyr1] Length=163 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/118 (37%), Positives = 63/118 (54%), Gaps = 3/118 (2%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M T RR L + L A++A + + C+AS VA TV +VA S G Y Sbjct 1 MNASVTTVRRGLFGMFAGGLLAFGTAAIVAPVAGAQPAPECSASNVAGTVSTVAASEGAY 60 Query 61 LDSHPETNQVMTAV-LQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 L ++P+TN+ +TA+ +Q Q P + + A+FE NP+V L A+ QP + L T C L Sbjct 61 LAANPQTNEALTAISVQPQ--PEAQTAYAAYFEQNPQVEEQLKAIHQPASALETLCGL 116 >gi|145222117|ref|YP_001132795.1| hypothetical protein Mflv_1525 [Mycobacterium gilvum PYR-GCK] gi|145214603|gb|ABP44007.1| hypothetical protein Mflv_1525 [Mycobacterium gilvum PYR-GCK] Length=163 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/118 (37%), Positives = 63/118 (54%), Gaps = 3/118 (2%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M T RR L + L A++A + + C+AS VA TV +VA S G Y Sbjct 1 MNASVTTVRRGLFGMFAGGLLAFGTAAIVAPVAGAQPAPECSASNVAGTVSTVAASEGAY 60 Query 61 LDSHPETNQVMTAV-LQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 L ++P+TN+ +TA+ +Q Q P + + A+FE NP+V L A+ QP + L T C L Sbjct 61 LAANPQTNEALTAISVQPQ--PEAQTAYAAYFEQNPQVEKQLKAIHQPASALETLCGL 116 >gi|120406180|ref|YP_956009.1| hypothetical protein Mvan_5232 [Mycobacterium vanbaalenii PYR-1] gi|119958998|gb|ABM16003.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=130 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/120 (35%), Positives = 65/120 (55%), Gaps = 1/120 (0%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M T RR L + L + A++A + + + C+AS VA TV SVA S G Y Sbjct 1 MNASVTTVRRGLFGMFAGGLLAFGSAAIVAPVANSQPAPDCSASNVAGTVSSVAASEGAY 60 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 L ++P+T+Q ++A+ Q P S A+ A F NP+V L A+ QP++ L +C + ++ Sbjct 61 LAANPQTDQALSAIATQP-EPESQAAYGAFFAQNPQVEDQLQAIHQPVSALKNQCGVEVT 119 >gi|336461831|gb|EGO40687.1| hypothetical protein MAPs_26670 [Mycobacterium avium subsp. paratuberculosis S397] Length=134 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/113 (39%), Positives = 60/113 (54%), Gaps = 2/113 (1%) Query 4 GTATTRRRLLAVLIALALPGAAVALLAEPSATGASDP-CAASEVARTVGSVAKSMGDYLD 62 G A T L+A L+ A P AA + +P AS P C A+++A+ VA + YL Sbjct 22 GVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAGVAAATSAYLF 81 Query 63 SHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 SHP+ N T+ L+ Q A LK + +ANP+ SDL + QPLTD RC Sbjct 82 SHPDVNAYFTS-LKGQPRDEMRAQLKQYMDANPQTHSDLEGIRQPLTDFQDRC 133 >gi|108800335|ref|YP_640532.1| hypothetical protein Mmcs_3369 [Mycobacterium sp. MCS] gi|119869463|ref|YP_939415.1| hypothetical protein Mkms_3431 [Mycobacterium sp. KMS] gi|126435958|ref|YP_001071649.1| hypothetical protein Mjls_3380 [Mycobacterium sp. JLS] gi|108770754|gb|ABG09476.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695552|gb|ABL92625.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126235758|gb|ABN99158.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=127 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/120 (36%), Positives = 64/120 (54%), Gaps = 6/120 (5%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 M T T RR+L VL AL G A A +A PSA+ A C A+ ++ + SV+ Y Sbjct 1 MITSGITMRRKLAGVLSTGALLGVAAATIAIPSAS-AQPQCTAAGLSSALSSVSGQTAAY 59 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPIS 120 L+SHP N +T G G A ++ +F ANP+ +DL ++QPL L +C + ++ Sbjct 60 LNSHPGANDAIT-----NAGSGGEAVIRNYFVANPQEWADLQRIAQPLRTLRQQCQVDVA 114 >gi|342861100|ref|ZP_08717749.1| hypothetical protein MCOL_19552 [Mycobacterium colombiense CECT 3035] gi|342131544|gb|EGT84814.1| hypothetical protein MCOL_19552 [Mycobacterium colombiense CECT 3035] Length=132 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/117 (34%), Positives = 62/117 (53%), Gaps = 2/117 (1%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK + RR++ + L G A+ ++ PSA A D C+ + V TV SV S Y Sbjct 1 MKISSIVARRKVAGISAGCVLGGMAMGVVGAPSAAAAPD-CSPAGVNNTVSSVQGSAQQY 59 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 L +HP NQV+TA Q P + +SL+ +F +P+ +DL + P+ D +C++ Sbjct 60 LAAHPGANQVVTAAYGQPR-PQAESSLRGYFTGHPQEYNDLRGILAPIGDTERQCNV 115 >gi|296169140|ref|ZP_06850796.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896189|gb|EFG75853.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=132 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/117 (35%), Positives = 61/117 (53%), Gaps = 2/117 (1%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK + RRRL + L G + ++ P+A A D C+ V TV SV S Y Sbjct 1 MKISSIVARRRLAGISAGCLLGGITMGVVGAPTAAAAPD-CSPGGVNATVSSVQGSAEQY 59 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 L +HP NQV+TA Q P + A+L+++F A+P+ DL + P+ D +C++ Sbjct 60 LSAHPGANQVVTAAYGQPR-PEAAANLRSYFTAHPQEYYDLRGILAPIGDTERQCNV 115 >gi|118618562|ref|YP_906894.1| hypothetical protein MUL_3206 [Mycobacterium ulcerans Agy99] gi|118570672|gb|ABL05423.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=111 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/110 (35%), Positives = 56/110 (51%), Gaps = 6/110 (5%) Query 6 ATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSHP 65 A RR + A L G+A +A+P A C A+++ART V+ + DYL +HP Sbjct 7 AVHRRIAVGAFSAALLFGSAAIAVADPPAN-----CTAADLARTASGVSNATADYLFNHP 61 Query 66 ETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 + N T L+ Q A+ + + +ANP V +DL + QPL D RC Sbjct 62 DVNDFFTG-LRGQDRDAMSANTQNYLDANPSVKADLQGIRQPLVDFKGRC 110 >gi|118466079|ref|YP_881442.1| hypothetical protein MAV_2237 [Mycobacterium avium 104] gi|118167366|gb|ABK68263.1| conserved hypothetical protein [Mycobacterium avium 104] Length=134 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/113 (39%), Positives = 60/113 (54%), Gaps = 2/113 (1%) Query 4 GTATTRRRLLAVLIALALPGAAVALLAEPSATGASDP-CAASEVARTVGSVAKSMGDYLD 62 G A T L+A L+ A P AA + +P AS P C A+++A+ VA + YL Sbjct 22 GVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAGVAAATSAYLF 81 Query 63 SHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 SHP+ N T+ L+ Q A LK + +ANP+ +DL + QPLTD RC Sbjct 82 SHPDVNAYFTS-LKGQPRDEMRAQLKQYMDANPQTHADLEGIRQPLTDFQDRC 133 >gi|254822546|ref|ZP_05227547.1| hypothetical protein MintA_21634 [Mycobacterium intracellulare ATCC 13950] Length=132 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/117 (35%), Positives = 62/117 (53%), Gaps = 2/117 (1%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK + RRR+ V L G A+ ++ PSA A D C+ + V TV SV S Y Sbjct 1 MKISSIVARRRVAGVSAGCLLGGMAMGIVGAPSAAAAPD-CSPAGVNSTVSSVQGSAEQY 59 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 L +HP NQV+TA Q P + +SL+++F +P+ DL + P+ + +C++ Sbjct 60 LAAHPGANQVVTAAYGQPR-PEAASSLRSYFTGHPQEYYDLRGILAPIGETERQCNV 115 >gi|183982565|ref|YP_001850856.1| hypothetical protein MMAR_2554 [Mycobacterium marinum M] gi|183175891|gb|ACC41001.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=111 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/105 (36%), Positives = 56/105 (54%), Gaps = 4/105 (3%) Query 14 AVLIALALPGAAVALLAEPSATGASDP---CAASEVARTVGSVAKSMGDYLDSHPETNQV 70 AV +A+ + ALL +A +DP C A+++ART V+ + DYL +HP+ N Sbjct 7 AVHRGIAVGAFSAALLFGSAAIAVADPPANCTAADLARTASGVSNATADYLFNHPDVNDF 66 Query 71 MTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 T L+ Q A+ + + +ANP V +DL + QPL D RC Sbjct 67 FTG-LRGQDRDAMSANTQNYLDANPSVKADLQGIRQPLVDFKGRC 110 >gi|254774927|ref|ZP_05216443.1| hypothetical protein MaviaA2_09680 [Mycobacterium avium subsp. avium ATCC 25291] Length=110 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/105 (39%), Positives = 57/105 (55%), Gaps = 2/105 (1%) Query 12 LLAVLIALALPGAAVALLAEPSATGASDP-CAASEVARTVGSVAKSMGDYLDSHPETNQV 70 L+A L+ A P AA + +P AS P C A+++A+ VA + YL SHP+ N Sbjct 6 LVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAGVAAATSAYLFSHPDVNAY 65 Query 71 MTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 T+ L+ Q A LK + +ANP+ +DL + QPLTD RC Sbjct 66 FTS-LKGQPRDEMRAQLKQYMDANPQTHADLEGIRQPLTDFQDRC 109 >gi|342857241|ref|ZP_08713897.1| hypothetical protein MCOL_00145 [Mycobacterium colombiense CECT 3035] gi|342134574|gb|EGT87740.1| hypothetical protein MCOL_00145 [Mycobacterium colombiense CECT 3035] Length=111 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/104 (36%), Positives = 56/104 (54%), Gaps = 2/104 (1%) Query 13 LAVLIALALPGAAVALLAEPSATGASDP-CAASEVARTVGSVAKSMGDYLDSHPETNQVM 71 +A+L A A AA + +P +S P C A+++A+ VA + YL +HP+ N Sbjct 8 VAMLFATAGSAAADWPMDDPEPAPSSQPNCTAADLAQVSSGVAAATSAYLFTHPDVNAYF 67 Query 72 TAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 T+ L+ Q A LK + +ANP+ +DL + QPLTD RC Sbjct 68 TS-LKGQPRDDMRAQLKQYMDANPQTHADLEGIRQPLTDFQNRC 110 >gi|254819829|ref|ZP_05224830.1| hypothetical protein MintA_07889 [Mycobacterium intracellulare ATCC 13950] Length=111 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/104 (37%), Positives = 54/104 (52%), Gaps = 2/104 (1%) Query 13 LAVLIALALPGAAVALLAEPSATGASDP-CAASEVARTVGSVAKSMGDYLDSHPETNQVM 71 +A+L A A AA EP AS P C A+++A+ VA + YL +HP+ N Sbjct 8 VAMLFATAGWAAADVPADEPEPAPASQPNCTAADLAQVSSGVAAATSAYLFTHPDVNDYF 67 Query 72 TAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 T+ L+ Q LK + +ANP+ +DL + QPLTD RC Sbjct 68 TS-LKGQPRSDMRDQLKQYMDANPQTHADLEGIRQPLTDFQNRC 110 >gi|169631078|ref|YP_001704727.1| hypothetical protein MAB_3999 [Mycobacterium abscessus ATCC 19977] gi|169243045|emb|CAM64073.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=114 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/78 (38%), Positives = 43/78 (56%), Gaps = 1/78 (1%) Query 41 CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASD 100 C A+++A VA S YL +HP+ N T+ + G A++KA+F NP+ +D Sbjct 33 CTAADLAGVSAGVAASTSSYLFTHPDVNDFFTSQAGKPHGEMQ-AAVKAYFSTNPEAEND 91 Query 101 LHALSQPLTDLSTRCSLP 118 L A+ QP+ D RC LP Sbjct 92 LRAIRQPVVDFRERCQLP 109 >gi|120406697|ref|YP_956526.1| hypothetical protein Mvan_5755 [Mycobacterium vanbaalenii PYR-1] gi|119959515|gb|ABM16520.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=136 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/79 (38%), Positives = 44/79 (56%), Gaps = 1/79 (1%) Query 41 CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASD 100 C+AS + TV SV + YLD+HP NQ +TA + Q P + A+L+ +F ANP D Sbjct 44 CSASSLTGTVSSVTAAARQYLDAHPGANQAVTAAMNQPR-PAAEANLRGYFTANPAEYYD 102 Query 101 LHALSQPLTDLSTRCSLPI 119 L + PL D C++ + Sbjct 103 LRGILAPLGDAQRSCNVTV 121 >gi|108802142|ref|YP_642339.1| hypothetical protein Mmcs_5179 [Mycobacterium sp. MCS] gi|119871295|ref|YP_941247.1| hypothetical protein Mkms_5268 [Mycobacterium sp. KMS] gi|126438123|ref|YP_001073814.1| hypothetical protein Mjls_5560 [Mycobacterium sp. JLS] gi|108772561|gb|ABG11283.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697384|gb|ABL94457.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237923|gb|ABO01324.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=132 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 42/119 (36%), Positives = 62/119 (53%), Gaps = 2/119 (1%) Query 1 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDY 60 MK RR + V G A A +A P+A+ A D C+AS VA TV +V S Y Sbjct 1 MKFSGNAARRGIAGVFAGCVFGGVAAATIAAPTASAAVD-CSASGVANTVSTVTGSARQY 59 Query 61 LDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPI 119 L HP NQV+TA + Q P + A ++ +F ANP+ +L + P+ D +C++ + Sbjct 60 LAEHPGANQVVTAAMSQPR-PQAEADIRGYFTANPQEYYELRGILAPIGDTQRQCNVTV 117 >gi|169629010|ref|YP_001702659.1| hypothetical protein MAB_1922 [Mycobacterium abscessus ATCC 19977] gi|169240977|emb|CAM62005.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=111 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/77 (36%), Positives = 41/77 (54%), Gaps = 2/77 (2%) Query 41 CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVA--SLKAHFEANPKVA 98 C SE AR A +YL+ HP+ N M+ L+ G G +++A+ +ANP Sbjct 31 CTVSEEARLDAVAATKRAEYLERHPDVNTAMSDALKNTPGDGGAKHEAVQAYLDANPAAK 90 Query 99 SDLHALSQPLTDLSTRC 115 +DL A+ QP+ D + RC Sbjct 91 TDLDAIRQPVRDFTNRC 107 >gi|315441595|ref|YP_004074472.1| hypothetical protein Mspyr1_54810 [Mycobacterium sp. Spyr1] gi|315265250|gb|ADU01991.1| hypothetical protein Mspyr1_54810 [Mycobacterium sp. Spyr1] Length=155 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/81 (38%), Positives = 43/81 (54%), Gaps = 0/81 (0%) Query 39 DPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVA 98 DPC+ + V R + M DYLDS P+ QV Q A++KA+ + +P VA Sbjct 42 DPCSPAAVMRAHAAAMTQMADYLDSRPDVQQVFIDARSQGTPEERRAAIKAYTDTHPDVA 101 Query 99 SDLHALSQPLTDLSTRCSLPI 119 + + QP+ DLS RC LP+ Sbjct 102 ATFQNIRQPVRDLSARCGLPM 122 >gi|118473055|ref|YP_890791.1| hypothetical protein MSMEG_6579 [Mycobacterium smegmatis str. MC2 155] gi|118174342|gb|ABK75238.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=132 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/113 (33%), Positives = 55/113 (49%), Gaps = 1/113 (0%) Query 5 TATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSH 64 T T RR LA + A L G A + A+ C+AS VA TV + YLD+H Sbjct 4 TGITTRRGLAGICASGLLGGMAAAVIAAPTASAAPDCSASGVANTVSMATGAAKSYLDTH 63 Query 65 PETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 P NQ ++ L Q + A+L+ +F +NP+ DL + P+ D C++ Sbjct 64 PGANQAVSTALTQPRDQ-AAATLRGYFTSNPQEYYDLRGILSPIGDTQRTCNV 115 >gi|315441600|ref|YP_004074477.1| hypothetical protein Mspyr1_54910 [Mycobacterium sp. Spyr1] gi|315265255|gb|ADU01996.1| hypothetical protein Mspyr1_54910 [Mycobacterium sp. Spyr1] Length=161 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/82 (38%), Positives = 44/82 (54%), Gaps = 0/82 (0%) Query 39 DPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVA 98 DPC+ + V R + M DYLDS P+ QV Q +KA+ + +P VA Sbjct 38 DPCSPAAVMRAHAAAMTQMADYLDSRPDVQQVFVDARSQATPQERHDVIKAYNDTHPDVA 97 Query 99 SDLHALSQPLTDLSTRCSLPIS 120 + L + QP+ DLSTRC LP++ Sbjct 98 AALRNIHQPVQDLSTRCGLPMN 119 >gi|183984332|ref|YP_001852623.1| hypothetical protein MMAR_4361 [Mycobacterium marinum M] gi|183177658|gb|ACC42768.1| conserved hypothetical protein [Mycobacterium marinum M] Length=133 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/109 (34%), Positives = 58/109 (54%), Gaps = 2/109 (1%) Query 9 RRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSHPETN 68 RR+++++ L A+ L P A A+D C+ V+ TV SV S YL +H N Sbjct 10 RRQVVSISAGCLLGELAIGFLGAPQAAAAAD-CSPQGVSATVSSVTASARQYLAAHEGAN 68 Query 69 QVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSL 117 Q++ A Q P + ASL+++F A+P+ DL A+ P+ D +C + Sbjct 69 QIVMAAYGQPYAPAA-ASLRSYFTAHPQEYQDLRAILAPIADTERQCDV 116 >gi|118471775|ref|YP_889359.1| hypothetical protein MSMEG_5111 [Mycobacterium smegmatis str. MC2 155] gi|118173062|gb|ABK73958.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=123 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/77 (36%), Positives = 42/77 (55%), Gaps = 1/77 (1%) Query 41 CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASD 100 C A+++A VA + YL +HP+ N T+V + S A++ A+FE NP+ +D Sbjct 44 CTAADLAGIASGVAAATSSYLFTHPDVNDFYTSVRGRPHEEAS-AAIDAYFEGNPQAHAD 102 Query 101 LHALSQPLTDLSTRCSL 117 L + QPL D RC + Sbjct 103 LAGIRQPLVDFRNRCGI 119 >gi|183981204|ref|YP_001849495.1| exported protein [Mycobacterium marinum M] gi|183174530|gb|ACC39640.1| exported protein [Mycobacterium marinum M] Length=142 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/113 (33%), Positives = 56/113 (50%), Gaps = 6/113 (5%) Query 6 ATTRRRLLAVLIALALPGAAVALLAEPSATGASDP---CAASEVARTVGSVAKSMGDYLD 62 A T R +AV IA GAA +L +A +DP C +++A VA + YL Sbjct 32 APTGYRTIAVGIATGALGAA--MLLGSAAIAVADPPPNCTTADLAGISAGVAAATSTYLF 89 Query 63 SHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 +HP+ N+ T L+ Q +++ + ANP V +DL + QP+ D RC Sbjct 90 THPDVNEFFTG-LRGQERDAMRENVQNYLNANPNVKADLDGIRQPVVDFKDRC 141 >gi|296166108|ref|ZP_06848553.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898517|gb|EFG78078.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=137 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query 41 CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASD 100 C A+++A+ VA + YL +HP+ N T+ L+ Q + LK + +ANP+ +D Sbjct 63 CTAADLAQVSAGVAAATSAYLFTHPDVNDYFTS-LRGQPRADARDQLKQYMDANPQTHAD 121 Query 101 LHALSQPLTDLSTRC 115 L + QPLTD RC Sbjct 122 LEGIRQPLTDFHNRC 136 >gi|118617107|ref|YP_905439.1| exported protein [Mycobacterium ulcerans Agy99] gi|118569217|gb|ABL03968.1| exported protein [Mycobacterium ulcerans Agy99] Length=115 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/114 (35%), Positives = 58/114 (51%), Gaps = 8/114 (7%) Query 6 ATTRRRLLAVLIALALPGAAVA-LLAEPSATGASDP---CAASEVARTVGSVAKSMGDYL 61 A T R +AV IA GA VA +L +AT +DP C +++A VA + YL Sbjct 5 APTGYRTIAVGIAT---GALVAAMLLGSAATAVADPPPNCTTADLAGISAGVAAATSTYL 61 Query 62 DSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRC 115 +HP+ N+ T L+ Q +++ + ANP V +DL + QP+ D RC Sbjct 62 FTHPDVNEFFTG-LRGQERDAMRENVQNYLNANPDVKADLDGIRQPVVDFKDRC 114 >gi|169631602|ref|YP_001705251.1| hypothetical protein MAB_4528c [Mycobacterium abscessus ATCC 19977] gi|169243569|emb|CAM64597.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=248 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/101 (32%), Positives = 53/101 (53%), Gaps = 10/101 (9%) Query 39 DPCAASEVARTVGSVAKSMGDYLDSHPETNQVMT---AVLQQQVGPGSVASLKAHFEANP 95 D C AS++ +TVG+V ++ YL+ HP+ + T A Q Q+ +++ + P Sbjct 73 DGCQASKMTKTVGNVVQNAASYLEQHPDVDAAFTEIKAAPQDQI----ATKTQSYLVSRP 128 Query 96 KVASDLHALSQPLTDLSTRCSLPISGLQAI---GLMQAVQG 133 VA+ L ++ PL +L T+C LP+ Q + GL A G Sbjct 129 DVAASLGGIAAPLNELRTKCGLPLDLAQVVNGGGLNPAAMG 169 >gi|118473225|ref|YP_889736.1| hypothetical protein MSMEG_5498 [Mycobacterium smegmatis str. MC2 155] gi|118174512|gb|ABK75408.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=120 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/74 (34%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query 45 EVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHAL 104 E+AR + V +YL HP+ N T+ L+ Q +++ + +ANP V DL + Sbjct 45 EMARVMSGVTFDTSNYLTEHPDVNDFFTS-LKGQPKDQIAENVRGYLDANPAVRDDLQRI 103 Query 105 SQPLTDLSTRCSLP 118 QP D RC LP Sbjct 104 RQPAADFRNRCGLP 117 >gi|145222400|ref|YP_001133078.1| hypothetical protein Mflv_1810 [Mycobacterium gilvum PYR-GCK] gi|315442832|ref|YP_004075711.1| hypothetical protein Mspyr1_11940 [Mycobacterium sp. Spyr1] gi|145214886|gb|ABP44290.1| hypothetical protein Mflv_1810 [Mycobacterium gilvum PYR-GCK] gi|315261135|gb|ADT97876.1| hypothetical protein Mspyr1_11940 [Mycobacterium sp. Spyr1] Length=117 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/94 (31%), Positives = 50/94 (54%), Gaps = 5/94 (5%) Query 33 SATGASDP----CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLK 88 SA AS P C+ ++ A + V+ S+ Y+ +HP+ N + L+ A + Sbjct 22 SALAASQPPPPNCSIADQAGILSGVSASLSAYMFTHPDVNGFFSG-LRGLPPEERRAKVD 80 Query 89 AHFEANPKVASDLHALSQPLTDLSTRCSLPISGL 122 A+ + NP+V +D+ + QP+TD RC LP +G+ Sbjct 81 AYLDMNPRVEADMQGIRQPMTDFRARCGLPPAGM 114 >gi|333989617|ref|YP_004522231.1| hypothetical protein JDM601_0977 [Mycobacterium sp. JDM601] gi|333485585|gb|AEF34977.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=110 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/78 (31%), Positives = 41/78 (53%), Gaps = 1/78 (1%) Query 41 CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASD 100 C A+++A VA S YL +HP+ N + L+ + +++ +F NP+ +D Sbjct 25 CTAADLANVTAGVAASTSGYLFAHPDVNAFYSG-LRDRPDDEVPEAIRGYFADNPQAHTD 83 Query 101 LHALSQPLTDLSTRCSLP 118 L + +PL D +RC LP Sbjct 84 LLGIRRPLVDFRSRCELP 101 >gi|108797144|ref|YP_637341.1| hypothetical protein Mmcs_0164 [Mycobacterium sp. MCS] gi|119866229|ref|YP_936181.1| hypothetical protein Mkms_0173 [Mycobacterium sp. KMS] gi|126432767|ref|YP_001068458.1| hypothetical protein Mjls_0154 [Mycobacterium sp. JLS] gi|108767563|gb|ABG06285.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692318|gb|ABL89391.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126232567|gb|ABN95967.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=132 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/78 (36%), Positives = 42/78 (54%), Gaps = 7/78 (8%) Query 41 CAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQ---QVGPGSVASLKAHFEANPKV 97 C A+++A V+ S YL +HP N T++ Q Q+ P ++ + ANP+V Sbjct 46 CTAADLAGVASGVSASTSAYLFTHPPVNDFFTSLEGQSRDQIRP----QVEEYLNANPQV 101 Query 98 ASDLHALSQPLTDLSTRC 115 +DL + QPL DL TRC Sbjct 102 KADLTGIRQPLVDLKTRC 119 Lambda K H 0.314 0.126 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128858389450 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40