BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0205

Length=367
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607346|ref|NP_214719.1|  transmembrane protein [Mycobacteriu...   700    0.0   
gi|148821398|ref|YP_001286152.1|  transmembrane protein [Mycobact...   698    0.0   
gi|289441581|ref|ZP_06431325.1|  conserved membrane protein [Myco...   697    0.0   
gi|31791383|ref|NP_853876.1|  transmembrane protein [Mycobacteriu...   695    0.0   
gi|289756269|ref|ZP_06515647.1|  conserved transmembrane protein ...   525    4e-147
gi|240173428|ref|ZP_04752086.1|  transmembrane protein [Mycobacte...   524    8e-147
gi|296167423|ref|ZP_06849824.1|  transmembrane protein [Mycobacte...   509    2e-142
gi|254822894|ref|ZP_05227895.1|  hypothetical protein MintA_23394...   499    4e-139
gi|254777409|ref|ZP_05218925.1|  hypothetical protein MaviaA2_224...   497    1e-138
gi|342859339|ref|ZP_08715993.1|  transmembrane protein [Mycobacte...   494    8e-138
gi|41409738|ref|NP_962574.1|  hypothetical protein MAP3640 [Mycob...   490    1e-136
gi|183980476|ref|YP_001848767.1|  transmembrane protein [Mycobact...   489    4e-136
gi|118466956|ref|YP_884090.1|  hypothetical protein MAV_4969 [Myc...   488    4e-136
gi|108797149|ref|YP_637346.1|  hypothetical protein Mmcs_0169 [My...   481    8e-134
gi|126432772|ref|YP_001068463.1|  hypothetical protein Mjls_0159 ...   480    2e-133
gi|118471020|ref|YP_884664.1|  integral membrane protein [Mycobac...   461    8e-128
gi|145221061|ref|YP_001131739.1|  hypothetical protein Mflv_0457 ...   438    7e-121
gi|120401222|ref|YP_951051.1|  hypothetical protein Mvan_0195 [My...   436    4e-120
gi|333988808|ref|YP_004521422.1|  transmembrane protein [Mycobact...   429    3e-118
gi|169631595|ref|YP_001705244.1|  hypothetical protein MAB_4521c ...   358    8e-97 
gi|111022136|ref|YP_705108.1|  hypothetical protein RHA1_ro05169 ...   351    9e-95 
gi|226364629|ref|YP_002782411.1|  hypothetical protein ROP_52190 ...   350    2e-94 
gi|325677165|ref|ZP_08156832.1|  integral membrane protein [Rhodo...   347    1e-93 
gi|312141448|ref|YP_004008784.1|  integral membrane protein [Rhod...   342    4e-92 
gi|229494234|ref|ZP_04387997.1|  integral membrane protein [Rhodo...   339    3e-91 
gi|262204300|ref|YP_003275508.1|  hypothetical protein Gbro_4482 ...   332    5e-89 
gi|226304565|ref|YP_002764523.1|  hypothetical protein RER_10760 ...   326    4e-87 
gi|343924432|ref|ZP_08763981.1|  hypothetical protein GOALK_016_0...   319    5e-85 
gi|54027467|ref|YP_121709.1|  hypothetical protein nfa54930 [Noca...   317    1e-84 
gi|330470380|ref|YP_004408123.1|  hypothetical protein VAB18032_0...   298    1e-78 
gi|238061336|ref|ZP_04606045.1|  hypothetical protein MCAG_02302 ...   295    1e-77 
gi|300791109|ref|YP_003771400.1|  hypothetical protein AMED_9310 ...   289    5e-76 
gi|159035990|ref|YP_001535243.1|  hypothetical protein Sare_0322 ...   283    2e-74 
gi|326383536|ref|ZP_08205222.1|  hypothetical protein SCNU_11385 ...   282    5e-74 
gi|145592845|ref|YP_001157142.1|  hypothetical protein Strop_0279...   276    4e-72 
gi|317507941|ref|ZP_07965636.1|  transmembrane protein [Segnilipa...   273    2e-71 
gi|134103784|ref|YP_001109445.1|  hypothetical protein SACE_7364 ...   273    3e-71 
gi|119962201|ref|YP_947065.1|  permease [Arthrobacter aurescens T...   272    8e-71 
gi|116669725|ref|YP_830658.1|  hypothetical protein Arth_1164 [Ar...   268    7e-70 
gi|298527597|ref|ZP_07015006.1|  conserved hypothetical protein [...   266    4e-69 
gi|315503542|ref|YP_004082429.1|  hypothetical protein ML5_2759 [...   266    6e-69 
gi|302870180|ref|YP_003838817.1|  hypothetical protein Micau_5736...   265    6e-69 
gi|256381030|ref|YP_003104690.1|  hypothetical protein Amir_7052 ...   264    2e-68 
gi|257057886|ref|YP_003135718.1|  putative permease [Saccharomono...   263    4e-68 
gi|331700348|ref|YP_004336587.1|  hypothetical protein Psed_6646 ...   259    6e-67 
gi|302531313|ref|ZP_07283655.1|  hypothetical protein SSMG_07695 ...   259    7e-67 
gi|300787453|ref|YP_003767744.1|  hypothetical protein AMED_5588 ...   258    1e-66 
gi|288919568|ref|ZP_06413898.1|  protein of unknown function UPF0...   257    3e-66 
gi|158317061|ref|YP_001509569.1|  hypothetical protein Franean1_5...   250    2e-64 
gi|330469076|ref|YP_004406819.1|  hypothetical protein VAB18032_2...   250    3e-64 


>gi|15607346|ref|NP_214719.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
 gi|15839585|ref|NP_334622.1| hypothetical protein MT0215 [Mycobacterium tuberculosis CDC1551]
 gi|148659969|ref|YP_001281492.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
 54 more sequence titles
 Length=367

 Score =  700 bits (1806),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 367/367 (100%), Positives = 367/367 (100%), Gaps = 0/367 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
            PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS
Sbjct  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360

Query  361  SDHLTEV  367
            SDHLTEV
Sbjct  361  SDHLTEV  367


>gi|148821398|ref|YP_001286152.1| transmembrane protein [Mycobacterium tuberculosis F11]
 gi|148719925|gb|ABR04550.1| conserved transmembrane protein [Mycobacterium tuberculosis F11]
Length=367

 Score =  698 bits (1801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 366/367 (99%), Positives = 366/367 (99%), Gaps = 0/367 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLL LMLSALLVP
Sbjct  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLVLMLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
            PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS
Sbjct  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360

Query  361  SDHLTEV  367
            SDHLTEV
Sbjct  361  SDHLTEV  367


>gi|289441581|ref|ZP_06431325.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289445737|ref|ZP_06435481.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289568108|ref|ZP_06448335.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 11 more sequence titles
 Length=367

 Score =  697 bits (1798),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 366/367 (99%), Positives = 366/367 (99%), Gaps = 0/367 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
            PVDWLDSRGLP AVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct  61   PVDWLDSRGLPRAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS
Sbjct  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360

Query  361  SDHLTEV  367
            SDHLTEV
Sbjct  361  SDHLTEV  367


>gi|31791383|ref|NP_853876.1| transmembrane protein [Mycobacterium bovis AF2122/97]
 gi|121636117|ref|YP_976340.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224988590|ref|YP_002643277.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|31616968|emb|CAD93075.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis 
AF2122/97]
 gi|121491764|emb|CAL70226.1| Probable conserved transmembrane protein [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224771703|dbj|BAH24509.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341600133|emb|CCC62802.1| probable conserved transmembrane protein [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=367

 Score =  695 bits (1793),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 365/367 (99%), Positives = 365/367 (99%), Gaps = 0/367 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
            PVDWLDSRGLP AVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct  61   PVDWLDSRGLPRAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPT AFFNNAVQVLLGGNPFADVADVS
Sbjct  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTAAFFNNAVQVLLGGNPFADVADVS  360

Query  361  SDHLTEV  367
            SDHLTEV
Sbjct  361  SDHLTEV  367


>gi|289756269|ref|ZP_06515647.1| conserved transmembrane protein [Mycobacterium tuberculosis EAS054]
 gi|289696856|gb|EFD64285.1| conserved transmembrane protein [Mycobacterium tuberculosis EAS054]
Length=280

 Score =  525 bits (1352),  Expect = 4e-147, Method: Compositional matrix adjust.
 Identities = 274/277 (99%), Positives = 275/277 (99%), Gaps = 0/277 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
            PVDWLDSRGLP AVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct  61   PVDWLDSRGLPRAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGI  277
            LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAK +
Sbjct  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKAL  277


>gi|240173428|ref|ZP_04752086.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=384

 Score =  524 bits (1350),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 288/354 (82%), Positives = 317/354 (90%), Gaps = 0/354 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSASLDDASV PLVRKTAAW+WR LVI AA +A++WV++K E+IVVPVLLAL+LSALLVP
Sbjct  1    MSASLDDASVTPLVRKTAAWSWRLLVIFAAALAVIWVISKLEIIVVPVLLALILSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD R +P   AV+LVLL GFA+LGGIL FV+SQFI GLP LV +VERSIDS+RRWL
Sbjct  61   VVDWLDLRRVPRGAAVSLVLLGGFAILGGILAFVISQFIVGLPDLVKQVERSIDSSRRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            IEGPAHLR EQIDNAGNAAIEALRNNQAKLTSGA+STAATITEL+T AVLVLFTLIFFLY
Sbjct  121  IEGPAHLRREQIDNAGNAAIEALRNNQAKLTSGAISTAATITELLTGAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IWQYV K  P   RDRV  AGRAGY+SLIGY RATFLVALTDA GVG GLA+MGVP
Sbjct  181  GGRNIWQYVVKIVPVPARDRVLEAGRAGYSSLIGYVRATFLVALTDAIGVGTGLAIMGVP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVF GAFIPL+GA+++G LAVVVALLAKG+ YALIT+GLLIAVNQLEAHLLQP
Sbjct  241  LALPLASLVFLGAFIPLLGALISGLLAVVVALLAKGLVYALITLGLLIAVNQLEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFA  354
            LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA+QVLL  +P A
Sbjct  301  LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAMQVLLAKDPAA  354


>gi|296167423|ref|ZP_06849824.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897232|gb|EFG76837.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=382

 Score =  509 bits (1311),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 285/362 (79%), Positives = 316/362 (88%), Gaps = 0/362 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            M A+ DDASV PLVRKTAAWAWR LVIL A++ALLWV+ K EVI+VPVL+AL+LSALL+P
Sbjct  1    MPANTDDASVEPLVRKTAAWAWRLLVILFALLALLWVVKKLEVIIVPVLVALLLSALLLP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD RGLP   AV LVLL+ F++LGGIL FVV+QFI GLP L  +V RSI+S RRWL
Sbjct  61   VVDWLDRRGLPRGGAVALVLLTSFSLLGGILAFVVNQFIDGLPGLTEQVTRSIESIRRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            I+GPAHLR EQIDNAGNAAIEALRNNQAKL SGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct  121  IDGPAHLRREQIDNAGNAAIEALRNNQAKLESGALSTAATITELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IW YV+K FPA VRDRV  AGRAGY SL GY RATFLVALTDAAGVG GLA+MG+P
Sbjct  181  GGRNIWAYVSKIFPAHVRDRVSEAGRAGYGSLTGYVRATFLVALTDAAGVGTGLAIMGIP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVF GAFIPLIGA+V+G LAVVVALLAKG+ YALIT+GLLIAVNQLEAH+LQP
Sbjct  241  LALPLASLVFLGAFIPLIGALVSGLLAVVVALLAKGMVYALITLGLLIAVNQLEAHVLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPL VVLAI+ GGVLAG+VGALLAVPTVAF NNA+QVLL  +P A+    +
Sbjct  301  LVMGRAVSIHPLGVVLAISTGGVLAGIVGALLAVPTVAFLNNAMQVLLAPDPAAEAEKQT  360

Query  361  SD  362
             +
Sbjct  361  EE  362


>gi|254822894|ref|ZP_05227895.1| hypothetical protein MintA_23394 [Mycobacterium intracellulare 
ATCC 13950]
Length=380

 Score =  499 bits (1284),  Expect = 4e-139, Method: Compositional matrix adjust.
 Identities = 286/362 (80%), Positives = 315/362 (88%), Gaps = 0/362 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSA++DDASV P+VRKTAAWAWR LVILAA VALLWV+ K EVIVVPVL+AL+LSALLVP
Sbjct  1    MSANVDDASVEPVVRKTAAWAWRLLVILAAAVALLWVVKKLEVIVVPVLVALLLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD RGLP   AV LVLL GFA+LGGIL FV+ QFI GLP L  +V +SI+S RRWL
Sbjct  61   VVDWLDRRGLPRGGAVALVLLGGFAILGGILAFVILQFIDGLPGLTEQVTQSIESTRRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct  121  INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IW+YV +  PA VRDRV  AG AGY SLIGY RATFLVALTDAAGVG GLA+MG+P
Sbjct  181  GGRNIWRYVVQIIPAHVRDRVHEAGNAGYGSLIGYVRATFLVALTDAAGVGTGLAIMGIP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVF GAFIPLIGA+++G LAVVVALLAKGI YALIT+G+LIAVNQ+EAHLLQP
Sbjct  241  LALPLASLVFLGAFIPLIGALISGLLAVVVALLAKGIVYALITLGVLIAVNQMEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL  NP A+    +
Sbjct  301  LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPEAEAEKQT  360

Query  361  SD  362
             +
Sbjct  361  EE  362


>gi|254777409|ref|ZP_05218925.1| hypothetical protein MaviaA2_22461 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=382

 Score =  497 bits (1280),  Expect = 1e-138, Method: Compositional matrix adjust.
 Identities = 286/362 (80%), Positives = 313/362 (87%), Gaps = 0/362 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSA++DDASV P+VRKTAAWAWR LVILAA +A+ WVL K EVIVVPVL+AL+LSALLVP
Sbjct  1    MSANVDDASVEPIVRKTAAWAWRLLVILAAALAVFWVLAKLEVIVVPVLVALLLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD  GLP   AV LVLL GFA+LGGIL FVV QFI GLP L  +V +SI+S RRWL
Sbjct  61   VVDWLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct  121  INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IW+YV +  PA  R+RV  AG AGY SLIGY RATFLVALTDAAGVGAGLA+MG+P
Sbjct  181  GGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGLAIMGIP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVF GAFIPL+GAVVAGFLAVVVALLAKGI YALIT+GLL+AVNQ+EAHLLQP
Sbjct  241  LALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL  NP A+     
Sbjct  301  LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSAEAVKQE  360

Query  361  SD  362
             +
Sbjct  361  EE  362


>gi|342859339|ref|ZP_08715993.1| transmembrane protein [Mycobacterium colombiense CECT 3035]
 gi|342133580|gb|EGT86783.1| transmembrane protein [Mycobacterium colombiense CECT 3035]
Length=382

 Score =  494 bits (1273),  Expect = 8e-138, Method: Compositional matrix adjust.
 Identities = 284/362 (79%), Positives = 313/362 (87%), Gaps = 0/362 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSA+ DDASV PLVRKTAAWAWR LVIL A +ALLWV+ K EVIVVPVL+AL+LSALLVP
Sbjct  1    MSANADDASVEPLVRKTAAWAWRLLVILVAALALLWVVQKLEVIVVPVLVALLLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD RGLP   AV LVLL GFA+LGGIL FV+ QFI GLP L  +V +SI+S RRWL
Sbjct  61   VVDWLDKRGLPRGGAVALVLLGGFAILGGILAFVILQFIDGLPGLTEQVTQSIESTRRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct  121  IHGPAHLRNEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IWQYV +  P  VR RVR AG AGY SLIGY RATFLVALTDAAGVG GLA+MG+P
Sbjct  181  GGRNIWQYVLQIIPTGVRSRVREAGNAGYGSLIGYVRATFLVALTDAAGVGTGLAIMGIP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVF GAFIPLIGA+++G LAVVVALLAKGI YALIT+G+LIAVNQ+EAHLLQP
Sbjct  241  LALPLASLVFLGAFIPLIGALISGLLAVVVALLAKGIVYALITLGVLIAVNQIEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA+QVLL  +P A+    +
Sbjct  301  LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNALQVLLAPDPSAEAEKQT  360

Query  361  SD  362
             +
Sbjct  361  EE  362


>gi|41409738|ref|NP_962574.1| hypothetical protein MAP3640 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398570|gb|AAS06190.1| hypothetical protein MAP_3640 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336460054|gb|EGO38963.1| putative permease [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=382

 Score =  490 bits (1262),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 288/362 (80%), Positives = 313/362 (87%), Gaps = 0/362 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSA++DDASV P+VRKTAAWAWR LVILAA +AL WVL K EVIVVPVL+AL+LSALLVP
Sbjct  1    MSANVDDASVEPIVRKTAAWAWRLLVILAAALALFWVLAKLEVIVVPVLVALLLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD  GLP   AV LVLL GFA+LGGIL FVV QFI GLP L  +V +SI+S RRWL
Sbjct  61   VVDWLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct  121  INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IW+YV +  PA  RDRV  AG AGY SLIGY RATFLVALTDAAGVGAGLA+MG+P
Sbjct  181  GGRNIWRYVVQIVPAHARDRVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGLAIMGIP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVF GAFIPL+GAVVAGFLAVVVALLAKGI YALIT+GLL+AVNQ+EAHLLQP
Sbjct  241  LALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL  NP A+     
Sbjct  301  LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSAEAVKQE  360

Query  361  SD  362
             +
Sbjct  361  EE  362


>gi|183980476|ref|YP_001848767.1| transmembrane protein [Mycobacterium marinum M]
 gi|183173802|gb|ACC38912.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=389

 Score =  489 bits (1258),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 292/364 (81%), Positives = 320/364 (88%), Gaps = 0/364 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSASLDDASVAPLVRKTAAW+WR LVILAA+VALL V+ K E+IVVPVLLALMLSALLVP
Sbjct  1    MSASLDDASVAPLVRKTAAWSWRLLVILAALVALLLVIKKLEIIVVPVLLALMLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD+RGLP   AV+LVLL GF++LGGILTFV+SQFI GLP L  +VE SIDS+R+WL
Sbjct  61   VVDWLDARGLPRGAAVSLVLLGGFSILGGILTFVISQFIVGLPDLAYQVEHSIDSSRKWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            IEGP HLR EQIDNAGNAAIEAL NNQAKLTSGA+STAATITEL+TAAVLVLFTLIFFLY
Sbjct  121  IEGPPHLRREQIDNAGNAAIEALHNNQAKLTSGAISTAATITELLTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IWQYV K  PA VRDR  AAGRAGY SLIGY RATFLVALTDAAGVG GLAVMGVP
Sbjct  181  GGRNIWQYVAKIIPAHVRDRAMAAGRAGYGSLIGYVRATFLVALTDAAGVGTGLAVMGVP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLAS+VF GAFIPLIGA+++G LAVVVALLAKG+ YAL+T+ LLI VNQLEAHLLQP
Sbjct  241  LALPLASIVFLGAFIPLIGALISGLLAVVVALLAKGLVYALLTLALLITVNQLEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPL VVLAI+ GGVLAG+VGALLAVPTVAF NNA++VLL  +P A+     
Sbjct  301  LVMGRAVSIHPLGVVLAISTGGVLAGIVGALLAVPTVAFLNNAMRVLLAEDPIAEAQQQD  360

Query  361  SDHL  364
             D L
Sbjct  361  QDPL  364


>gi|118466956|ref|YP_884090.1| hypothetical protein MAV_4969 [Mycobacterium avium 104]
 gi|118168243|gb|ABK69140.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=382

 Score =  488 bits (1257),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 287/362 (80%), Positives = 313/362 (87%), Gaps = 0/362 (0%)

Query  1    MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP  60
            MSA++DDASV P+VRKTAAWAWR LVILAA +AL WVL K EVIVVPVL+AL+LSALLVP
Sbjct  1    MSANVDDASVEPIVRKTAAWAWRLLVILAAALALFWVLAKLEVIVVPVLVALLLSALLVP  60

Query  61   PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL  120
             VDWLD  GLP   AV LVLL GFA+LGGIL FVV QFI GLP L  +V +SI+S RRWL
Sbjct  61   VVDWLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRRWL  120

Query  121  IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY  180
            I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct  121  INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY  180

Query  181  GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP  240
            GGR+IW+YV +  PA  R+RV  AG AGY SLIGY RATFLVALTDAAGVGAGLA+MG+P
Sbjct  181  GGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGLAIMGIP  240

Query  241  LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP  300
            LALPLASLVF GAFIPL+GAVVAGFLAVVVALLAKGI YALIT+GLL+AVNQ+EAHLLQP
Sbjct  241  LALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIEAHLLQP  300

Query  301  LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS  360
            LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL  NP A+     
Sbjct  301  LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSAEAVKQE  360

Query  361  SD  362
             +
Sbjct  361  EE  362


>gi|108797149|ref|YP_637346.1| hypothetical protein Mmcs_0169 [Mycobacterium sp. MCS]
 gi|119866234|ref|YP_936186.1| hypothetical protein Mkms_0178 [Mycobacterium sp. KMS]
 gi|108767568|gb|ABG06290.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS]
 gi|119692323|gb|ABL89396.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS]
Length=381

 Score =  481 bits (1238),  Expect = 8e-134, Method: Compositional matrix adjust.
 Identities = 254/360 (71%), Positives = 300/360 (84%), Gaps = 0/360 (0%)

Query  4    SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD  63
            SL+D SV+PLVRK AAW+WR L+I  A+VA+LW++ + E+IVVPV LA ML+ALL+P VD
Sbjct  6    SLEDQSVSPLVRKAAAWSWRLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVD  65

Query  64   WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG  123
            +LD RG P   AV LVLLSG AV+GGILTFVVSQF+ G+P L  +V RSID  RRWL+EG
Sbjct  66   FLDRRGAPRGGAVALVLLSGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMRRWLVEG  125

Query  124  PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR  183
            P  L  EQIDNAGNAAIEA+RNNQ +LTSGALSTA TITE+VT A+LVLFTLIF L+GGR
Sbjct  126  PLDLSREQIDNAGNAAIEAVRNNQERLTSGALSTAGTITEIVTGALLVLFTLIFLLHGGR  185

Query  184  SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL  243
            +I+ ++TK FP  VRDRVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+M VPLAL
Sbjct  186  NIFGFITKVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLAL  245

Query  244  PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM  303
            PLASLVF GAF+PL+GAVV GFLAV+VALL KG+ YALIT+GL++AV QLE H+LQPLVM
Sbjct  246  PLASLVFLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVM  305

Query  304  GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDH  363
            GRAVSIHPLAVVLAIA GGVLAG+VGALLAVP VAF N+A++VLL  +  A V ++ +D 
Sbjct  306  GRAVSIHPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIRVLLARDQSAAVENLEADE  365


>gi|126432772|ref|YP_001068463.1| hypothetical protein Mjls_0159 [Mycobacterium sp. JLS]
 gi|126232572|gb|ABN95972.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS]
Length=381

 Score =  480 bits (1235),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 253/360 (71%), Positives = 300/360 (84%), Gaps = 0/360 (0%)

Query  4    SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD  63
            SL+D SV+PLVRK AAW+WR L+I  A+VA+LW++ + E+IVVPV LA ML+ALL+P VD
Sbjct  6    SLEDQSVSPLVRKAAAWSWRLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVD  65

Query  64   WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG  123
            +LD RG P   AV LVLLSG AV+GGILTFVVSQF+ G+P L  +V RSID  RRWL+EG
Sbjct  66   FLDRRGAPRGGAVALVLLSGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMRRWLVEG  125

Query  124  PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR  183
            P  L  EQIDNAGNAAIEA+RNNQ +LTSGALSTA TITE+VT A+LVLFTLIF L+GGR
Sbjct  126  PLDLSREQIDNAGNAAIEAVRNNQERLTSGALSTAGTITEIVTGALLVLFTLIFLLHGGR  185

Query  184  SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL  243
            +I+ ++T+ FP  VRDRVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+M VPLAL
Sbjct  186  NIFGFITQVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLAL  245

Query  244  PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM  303
            PLASLVF GAF+PL+GAVV GFLAV+VALL KG+ YALIT+GL++AV QLE H+LQPLVM
Sbjct  246  PLASLVFLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVM  305

Query  304  GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDH  363
            GRAVSIHPLAVVLAIA GGVLAG+VGALLAVP VAF N+A++VLL  +  A V ++ +D 
Sbjct  306  GRAVSIHPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIRVLLARDQAAAVENLETDE  365


>gi|118471020|ref|YP_884664.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
 gi|118172307|gb|ABK73203.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=379

 Score =  461 bits (1186),  Expect = 8e-128, Method: Compositional matrix adjust.
 Identities = 245/349 (71%), Positives = 291/349 (84%), Gaps = 0/349 (0%)

Query  7    DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD  66
            D +V+PLVRK AAW+WR L+I  A+VALLW++ + E++ VPV LA M++ALL+P VD++D
Sbjct  8    DEAVSPLVRKAAAWSWRLLIIGGAIVALLWLIKRLEILFVPVALATMVAALLLPAVDFMD  67

Query  67   SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH  126
             RG P   AV LVLL G AV+GGILTFVV+QFI G P LV ++ RSID  R WLI+GP H
Sbjct  68   RRGAPRGSAVALVLLGGIAVVGGILTFVVTQFIQGAPDLVEQMTRSIDGVRNWLIDGPLH  127

Query  127  LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW  186
            L  EQID+AGN AIEAL+ NQ K+T+GALSTA T+TEL+T AVL LFTLIF L GGR+I+
Sbjct  128  LSKEQIDSAGNTAIEALQRNQEKVTTGALSTAGTLTELLTGAVLTLFTLIFLLQGGRNIF  187

Query  187  QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA  246
             +VTKAFP  VR+RVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+MG+PLALPLA
Sbjct  188  AFVTKAFPEDVRERVRDAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMGIPLALPLA  247

Query  247  SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA  306
            SLVF GAF+PL+GAV+AGFLAVVVALLAKG+ YALIT+GL+IAV QLE H+LQPLVMGRA
Sbjct  248  SLVFLGAFVPLVGAVIAGFLAVVVALLAKGLVYALITLGLIIAVQQLEGHVLQPLVMGRA  307

Query  307  VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFAD  355
            VSIHPLAVVLAIA GGVLAG+VGALLAVP VAF N+A +VLL  +P A+
Sbjct  308  VSIHPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSATRVLLARDPHAE  356


>gi|145221061|ref|YP_001131739.1| hypothetical protein Mflv_0457 [Mycobacterium gilvum PYR-GCK]
 gi|315441968|ref|YP_004074847.1| permease [Mycobacterium sp. Spyr1]
 gi|145213547|gb|ABP42951.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK]
 gi|315260271|gb|ADT97012.1| predicted permease [Mycobacterium sp. Spyr1]
Length=383

 Score =  438 bits (1126),  Expect = 7e-121, Method: Compositional matrix adjust.
 Identities = 227/352 (65%), Positives = 283/352 (81%), Gaps = 0/352 (0%)

Query  4    SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD  63
            S+ D SV PLVR  AAW+WR LVI AA+V LLW++ + E++VVPV LA +++ALL+P VD
Sbjct  9    SIADDSVTPLVRMAAAWSWRLLVIFAAIVTLLWLVLRLEILVVPVALATIIAALLLPVVD  68

Query  64   WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG  123
            +LD RG P   AV LVLL+GFA+ GG+L FVV+QF+ G P LV +V  SI+   +WL +G
Sbjct  69   FLDRRGAPRGGAVALVLLTGFALFGGLLAFVVTQFVEGAPDLVGQVSTSIEGVGKWLTDG  128

Query  124  PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR  183
            P  +  +QI+ A + AIEAL++NQ KLTSGALSTA T+TE+VT A+LV FTLIF L+GGR
Sbjct  129  PLQVSDQQINQARDTAIEALQSNQEKLTSGALSTAGTLTEIVTGALLVFFTLIFLLHGGR  188

Query  184  SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL  243
            +I+ +VT+ FP+ VR RV  AGRAG+ SLIGY RATFLVA  DA G+G GLA+MGVPLAL
Sbjct  189  NIFSFVTRIFPSHVRGRVHDAGRAGFRSLIGYVRATFLVAAVDAIGIGVGLAIMGVPLAL  248

Query  244  PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM  303
            PLASLVF GAF+PL+GAVV GFLAV+VAL+AKG  YALIT+GL+IAV QLE H+LQPLVM
Sbjct  249  PLASLVFMGAFVPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQQLEGHVLQPLVM  308

Query  304  GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFAD  355
            GRAV+IHPLA+VLAIA G VLAG+VGALLAVP +AF N+A++VL   +P A+
Sbjct  309  GRAVAIHPLAIVLAIAGGAVLAGIVGALLAVPVLAFLNSAIRVLTADDPVAE  360


>gi|120401222|ref|YP_951051.1| hypothetical protein Mvan_0195 [Mycobacterium vanbaalenii PYR-1]
 gi|119954040|gb|ABM11045.1| protein of unknown function UPF0118 [Mycobacterium vanbaalenii 
PYR-1]
Length=384

 Score =  436 bits (1120),  Expect = 4e-120, Method: Compositional matrix adjust.
 Identities = 235/342 (69%), Positives = 283/342 (83%), Gaps = 0/342 (0%)

Query  7    DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD  66
            D SV+PLVRK AAW+WR L+IL A+V LLW++ + E+IVVPV LA +L+ALL+P VD+LD
Sbjct  12   DDSVSPLVRKAAAWSWRLLLILGAIVTLLWLILRLEIIVVPVALATILAALLLPVVDFLD  71

Query  67   SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH  126
             RG P   AV LVLLSGFA+ GG+L FV++QF+ G P LV +V  SI+    WL +GP  
Sbjct  72   RRGAPRGGAVALVLLSGFALFGGLLAFVITQFVEGAPALVGQVTTSIEGVGTWLTDGPLD  131

Query  127  LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW  186
            +  +QI+   +AAIEALR+NQ KLTSGALSTA T+TE+VT A+LVLFTLIF L+GGR+I+
Sbjct  132  VSPQQINQLRDAAIEALRSNQEKLTSGALSTAGTVTEIVTGALLVLFTLIFLLHGGRNIF  191

Query  187  QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA  246
             +VTK FP  VRDRVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+MGVPLALPLA
Sbjct  192  AFVTKMFPVHVRDRVRDAGRAGFRSLIGYIRATFLVALVDATGIGVGLAIMGVPLALPLA  251

Query  247  SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA  306
            SLVF GAFIPL+GAVV GFLAV+VAL+AKG  YALIT+GL+IAV QLE H+LQPLVMGRA
Sbjct  252  SLVFLGAFIPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQQLEGHVLQPLVMGRA  311

Query  307  VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLL  348
            V+IHPLA+VLAIA GGVLAG+VGALLAVP +AF N+A++VLL
Sbjct  312  VAIHPLAIVLAIAGGGVLAGIVGALLAVPALAFVNSAMRVLL  353


>gi|333988808|ref|YP_004521422.1| transmembrane protein [Mycobacterium sp. JDM601]
 gi|333484777|gb|AEF34169.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=379

 Score =  429 bits (1104),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 223/344 (65%), Positives = 275/344 (80%), Gaps = 0/344 (0%)

Query  14   VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA  73
            +RK AAWAWR LV+ AA++ +L +  + EVIVVPV LA+M+SALL+P VD LD  G+P  
Sbjct  1    MRKAAAWAWRLLVLFAAVLVVLLIARRLEVIVVPVALAMMMSALLLPGVDRLDRAGVPRG  60

Query  74   VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID  133
            +AV L+LL+G AVL  +L+FV+ +FI GLP LV +V + ++S + WLIEGP HL  +QID
Sbjct  61   LAVFLLLLTGVAVLAALLSFVIDEFIDGLPELVEQVTQMVNSTQHWLIEGPLHLSSDQID  120

Query  134  NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF  193
             AG   I  LRNNQAKLTSGALSTA TIT++ T A +VLFTLIFFLYGGR IW++  + F
Sbjct  121  KAGATVITELRNNQAKLTSGALSTAETITKIFTGAFVVLFTLIFFLYGGRDIWRFTVRFF  180

Query  194  PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA  253
            P+ VR +V AAG AG+ SLIGY RATFLVAL DA G+G GLAVM VPLALPLASLVF GA
Sbjct  181  PSDVRAKVHAAGVAGFESLIGYIRATFLVALVDAVGIGIGLAVMAVPLALPLASLVFLGA  240

Query  254  FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA  313
            FIPL+GAV+ G LAV+VAL+AKG  YAL+T+GL++AVNQLEAH+LQPLVMGRA+SIHPLA
Sbjct  241  FIPLVGAVLTGLLAVLVALIAKGWIYALVTLGLIVAVNQLEAHVLQPLVMGRAMSIHPLA  300

Query  314  VVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVA  357
            VVL I+ G +LAG+VGALLAVPT+AF + AV+VL+G +   D A
Sbjct  301  VVLGISTGAILAGIVGALLAVPTIAFIDRAVRVLVGSHDAEDAA  344


>gi|169631595|ref|YP_001705244.1| hypothetical protein MAB_4521c [Mycobacterium abscessus ATCC 
19977]
 gi|169243562|emb|CAM64590.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=399

 Score =  358 bits (919),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 200/358 (56%), Positives = 258/358 (73%), Gaps = 6/358 (1%)

Query  9    SVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR  68
            SV P VRK AAWAWR LV+LA  + +LW+    + I +P+LLALM SALLVP V++L   
Sbjct  9    SVHPYVRKGAAWAWRLLVLLAFGLTVLWLFWHLKTITIPLLLALMGSALLVPTVNFLQRH  68

Query  69   GLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLR  128
             +P ++AV +VLL+G A + GILTFVV QFI GLP L  ++  SI+S + W I    H+ 
Sbjct  69   KIPRSLAVVVVLLTGTAAIVGILTFVVDQFIKGLPDLSAQLTNSIESLKNWAIHSRFHIS  128

Query  129  GEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQY  188
             +QI  AG+A +  +++NQ ++TSGAL+TA T+TE++T AVL LFT IFFLYGG+ IW++
Sbjct  129  EDQIGKAGDALVNTIKDNQGRVTSGALATATTVTEIITGAVLTLFTTIFFLYGGKEIWEF  188

Query  189  VTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASL  248
            VT+ FP +VR RVR AG  G+ SLIGY RAT  VAL DA G+G GLA   VPLALPLASL
Sbjct  189  VTRIFPTAVRPRVRRAGVLGFGSLIGYVRATVAVALVDAIGIGVGLAAFSVPLALPLASL  248

Query  249  VFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVS  308
            VF GAFIP+IGA ++GF+AV +AL+ KG   A + + ++I V Q+E H+LQPL+MG AV 
Sbjct  249  VFLGAFIPIIGAAISGFVAVFIALITKGAFTAAMILVIVIVVMQVEGHVLQPLIMGHAVQ  308

Query  309  IHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDHLTE  366
            IH LAVVLAIAAGGVL G++GALLAVPTVA  N A++ L+   PF    D    +L E
Sbjct  309  IHALAVVLAIAAGGVLGGIIGALLAVPTVAVLNTAIRALI--EPF----DADDPYLRE  360


>gi|111022136|ref|YP_705108.1| hypothetical protein RHA1_ro05169 [Rhodococcus jostii RHA1]
 gi|110821666|gb|ABG96950.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=421

 Score =  351 bits (901),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 193/347 (56%), Positives = 256/347 (74%), Gaps = 0/347 (0%)

Query  8    ASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDS  67
            ASV P+VR  A W WR LVI A ++ L +++ + + +++PV LAL+ SALLVP VDWL +
Sbjct  22   ASVHPVVRVAAEWTWRLLVIFAGLLTLGYIVTRLDTVLIPVGLALLSSALLVPLVDWLQA  81

Query  68   RGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHL  127
            +G+P + AV +VL+    ++ GI+TFVV QFI GLP L  + E S+   + WL +GP H 
Sbjct  82   KGVPRSAAVVVVLIGSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVTQIQGWLTDGPLHF  141

Query  128  RGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQ  187
              +QI  AG++ ++++++N+ +LTSGAL+TA  + E+ T A+L LFTLIFFLYGG  IW+
Sbjct  142  SEDQIRQAGDSVVKSIQDNRQQLTSGALTTATVVGEIFTGALLTLFTLIFFLYGGSQIWE  201

Query  188  YVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLAS  247
            +VT+  P + R RVR AG  G+ SLIGY RAT  VA  DA G+GAGLA++GVPLALPLAS
Sbjct  202  FVTRLVPTTSRRRVRLAGSQGFGSLIGYVRATVAVAAADAVGIGAGLAILGVPLALPLAS  261

Query  248  LVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAV  307
            LVF GAFIP++GA + GFLAV+VAL+ KG   ALI +G++I V QLEAH+LQPL++GRAV
Sbjct  262  LVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVLQPLLLGRAV  321

Query  308  SIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFA  354
             +HPLAVVLAI  G VLAG+VG LLAVP VA  N AV+ LL  +P A
Sbjct  322  RLHPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRSLLSTDPDA  368


>gi|226364629|ref|YP_002782411.1| hypothetical protein ROP_52190 [Rhodococcus opacus B4]
 gi|226243118|dbj|BAH53466.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=427

 Score =  350 bits (897),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 194/356 (55%), Positives = 257/356 (73%), Gaps = 0/356 (0%)

Query  7    DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD  66
             ASV P+VR  A W WR LVI A ++ L +++ + + +++PV LAL+ SALLVP VDWL 
Sbjct  43   SASVHPVVRVAAEWTWRLLVIFAGLLTLGYIVTRLDTVLIPVGLALLASALLVPLVDWLQ  102

Query  67   SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH  126
             +G+P + AV +VL+    ++ GI+TFVV QFI GLP L  + E S+   + WL +GP H
Sbjct  103  GKGVPRSAAVLVVLIGSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVTQIQGWLTDGPFH  162

Query  127  LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW  186
               +QI  AG++ +++++ N+ +LTSGAL+TA  + E+ T A+L LFTLIFFLYGG  IW
Sbjct  163  FSEDQIRQAGDSVVKSIQENRQQLTSGALTTATVVGEIFTGALLTLFTLIFFLYGGTQIW  222

Query  187  QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA  246
            ++VT+  P++ R RVR AG  G+ SLIGY RAT  VA  DA G+GAGLA++GVPLALPLA
Sbjct  223  EFVTRLVPSTSRRRVRLAGSEGFGSLIGYVRATVAVAAADAVGIGAGLAILGVPLALPLA  282

Query  247  SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA  306
            SLVF GAFIP++GA + GFLAV+VAL+ KG   ALI +G++I V QLEAH+LQPL++GRA
Sbjct  283  SLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVLQPLLLGRA  342

Query  307  VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSD  362
            V +HPLAVVLAI  G VLAG+VG LLAVP VA  N AV+ LL  +P A    +  D
Sbjct  343  VRLHPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRSLLSADPEATYDALEVD  398


>gi|325677165|ref|ZP_08156832.1| integral membrane protein [Rhodococcus equi ATCC 33707]
 gi|325552038|gb|EGD21733.1| integral membrane protein [Rhodococcus equi ATCC 33707]
Length=401

 Score =  347 bits (891),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 191/357 (54%), Positives = 256/357 (72%), Gaps = 2/357 (0%)

Query  9    SVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR  68
            SV PLVR  AAW WR LV+ A ++AL +V++K E +V+PV LAL+ +A L+P VD L  R
Sbjct  18   SVHPLVRVGAAWTWRLLVLFAGLLALGYVVSKLESVVIPVALALLFAAFLMPAVDNLHRR  77

Query  69   GLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLR  128
            G+P + AV + ++    ++G IL+FVV QF+ GLP L  +   S+  A+ WL +GP H  
Sbjct  78   GVPRSAAVLVAVVGTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTKAQEWLTQGPLHFS  137

Query  129  GEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQY  188
             +QI +AG+  ++A+++NQ  LTSGAL+TA  I E+   A L LFTL+FFLYGG  +W++
Sbjct  138  EDQIRHAGDNVVKAIQSNQEALTSGALTTATVIGEIFAGAFLTLFTLVFFLYGGNQVWEF  197

Query  189  VTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASL  248
            VT+  P + R RVR AGR G+ SL+ Y RAT  VA  DA G+GAGLA++GVPLALPLASL
Sbjct  198  VTRIIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGAGLAILGVPLALPLASL  257

Query  249  VFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVS  308
            VF GAFIP++GA V GFLAV+VAL+ KG+  ALI +G+++ + QLE H+LQPL++GRAV 
Sbjct  258  VFVGAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQLEGHVLQPLLLGRAVR  317

Query  309  IHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDHLT  365
            +HPLAVVLAI  G VLAG+VG LLAVP VAF N A++ L  G+   D A+   + LT
Sbjct  318  LHPLAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGD--TDEAEEVYESLT  372


>gi|312141448|ref|YP_004008784.1| integral membrane protein [Rhodococcus equi 103S]
 gi|311890787|emb|CBH50106.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=383

 Score =  342 bits (878),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 188/354 (54%), Positives = 253/354 (72%), Gaps = 2/354 (0%)

Query  12   PLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLP  71
            PLVR  AAW WR LV+ A ++AL +V++K E +V+PV LAL+ +A L+P VD    RG+P
Sbjct  3    PLVRVGAAWTWRLLVLFAGLLALGYVVSKLESVVIPVALALLFAAFLMPAVDNQHRRGVP  62

Query  72   HAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQ  131
             + AV + ++    ++G IL+FVV QF+ GLP L  +   S+  A+ WL +GP H   +Q
Sbjct  63   RSAAVLVAVVGTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTKAQEWLTQGPLHFSEDQ  122

Query  132  IDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTK  191
            I +AG+  ++A+++NQ  LTSGAL+TA  I E+   A L LFTL+FFLYGG  +W++VT+
Sbjct  123  IRHAGDNVVKAIQSNQEALTSGALTTATVIGEIFAGAFLTLFTLVFFLYGGNQVWEFVTR  182

Query  192  AFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFF  251
              P + R RVR AGR G+ SL+ Y RAT  VA  DA G+GAGLA++GVPLALPLASLVF 
Sbjct  183  IIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGAGLAILGVPLALPLASLVFV  242

Query  252  GAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHP  311
            GAFIP++GA V GFLAV+VAL+ KG+  ALI +G+++ + QLE H+LQPL++GRAV +HP
Sbjct  243  GAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQLEGHVLQPLLLGRAVRLHP  302

Query  312  LAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDHLT  365
            LAVVLAI  G VLAG+VG LLAVP VAF N A++ L  G+   D A+   + LT
Sbjct  303  LAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGD--TDEAEEVYESLT  354


>gi|229494234|ref|ZP_04387997.1| integral membrane protein [Rhodococcus erythropolis SK121]
 gi|229318596|gb|EEN84454.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length=392

 Score =  339 bits (870),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 192/349 (56%), Positives = 251/349 (72%), Gaps = 0/349 (0%)

Query  4    SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD  63
            S D  +V P VR  A W+WR +VI A ++ L +V+ + E +++PV LAL+ SALL+P VD
Sbjct  6    SADARAVHPGVRIAAEWSWRLIVIFAGLLVLGYVVLRLETVLIPVGLALLTSALLIPIVD  65

Query  64   WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG  123
             L   G+P + AV +VLL+   ++ GI+TFVV QFI GLP L  +   S+   + WL  G
Sbjct  66   RLQVWGVPRSAAVIVVLLASIGLVAGIMTFVVEQFIDGLPQLTDQFTASVTQIQNWLTSG  125

Query  124  PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR  183
            P H   +QI  AG++ ++++++N+  LTSGAL+TA  I E+ T A+L LFTLIFFLYGG 
Sbjct  126  PLHFSEDQIRQAGDSVVKSVQSNRESLTSGALTTATVIGEIFTGALLTLFTLIFFLYGGD  185

Query  184  SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL  243
             IWQ+VT+  P   R RVR AG AG+ SLIGY RAT  VA  DA G+GAGLA++GVPLAL
Sbjct  186  QIWQFVTRIVPTDARRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGVPLAL  245

Query  244  PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM  303
            PLASLVF GAFIP++GA + GFLAV+VAL+ KG   ALI +G++I V QLEAH++QPL++
Sbjct  246  PLASLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQPLLL  305

Query  304  GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNP  352
            GRAV +HPLAVVLAI  G VLAG+VG LLAVP VA  N A++ LL  +P
Sbjct  306  GRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDP  354


>gi|262204300|ref|YP_003275508.1| hypothetical protein Gbro_4482 [Gordonia bronchialis DSM 43247]
 gi|262087647|gb|ACY23615.1| protein of unknown function UPF0118 [Gordonia bronchialis DSM 
43247]
Length=390

 Score =  332 bits (851),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 180/336 (54%), Positives = 251/336 (75%), Gaps = 0/336 (0%)

Query  12   PLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLP  71
            P VR  A W+WR L+I AA   LL +  +FE ++VPV LA++ SA+LVP VD LD RG+P
Sbjct  3    PTVRAAAEWSWRLLIIAAAGFVLLRLFTEFEEVLVPVALAILGSAMLVPVVDALDRRGVP  62

Query  72   HAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQ  131
             ++AV  V++    +L  +LTFVV +FI G+P L  +V  ++D  ++WL++GP H+  EQ
Sbjct  63   RSLAVLGVIVVALGILAAVLTFVVREFIRGVPELADQVRVTVDRTKQWLVDGPLHVDSEQ  122

Query  132  IDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTK  191
            + NAG+  +  ++NNQ K+TSGAL+TA T +E+VT A+L LF LIFFLYGG  IW+++ K
Sbjct  123  VRNAGSDVLNVVQNNQDKVTSGALATATTASEIVTGALLTLFLLIFFLYGGGQIWRFLVK  182

Query  192  AFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFF  251
              P+  R RV AAG AG+ +L+GY RAT +VAL DA G+G GLA++ VPLALPLASLVF 
Sbjct  183  GVPSGTRSRVWAAGIAGFGTLVGYVRATVVVALVDAIGIGIGLAILRVPLALPLASLVFL  242

Query  252  GAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHP  311
            GAFIP++GA+++G LAV+VAL+ +G   A+IT+ ++I V QLE+H+LQP ++GR+V +HP
Sbjct  243  GAFIPIVGALLSGTLAVLVALVTQGWIAAVITLAIVIGVMQLESHVLQPFLLGRSVRLHP  302

Query  312  LAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +AVVLAIAAG V AG++G LLAVP +AF N A++ L
Sbjct  303  VAVVLAIAAGLVSAGIIGGLLAVPLIAFLNTAIRHL  338


>gi|226304565|ref|YP_002764523.1| hypothetical protein RER_10760 [Rhodococcus erythropolis PR4]
 gi|226183680|dbj|BAH31784.1| hypothetical membrane protein [Rhodococcus erythropolis PR4]
Length=392

 Score =  326 bits (835),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 192/349 (56%), Positives = 251/349 (72%), Gaps = 0/349 (0%)

Query  4    SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD  63
            S D  +V P VR  A W+WR +VI A ++ L +V+ + E +++PV LAL+ SALL+P VD
Sbjct  6    SADARAVHPGVRIAAEWSWRLIVIFAGLLVLGYVVLRLETVLIPVGLALLASALLIPVVD  65

Query  64   WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG  123
             L   G+P + AV +VLL+   ++ GI+TFVV QFI GLP L  +   S+   + WL  G
Sbjct  66   RLQVWGVPRSAAVIVVLLASIGLVAGIMTFVVEQFIDGLPQLTDQFTASVTQIQNWLTSG  125

Query  124  PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR  183
            P H   +QI  AG++ ++++++N+  LTSGAL+TA  I E+ T A+L LFTLIFFLYGG 
Sbjct  126  PLHFSEDQIRQAGDSVVKSVQSNRESLTSGALTTATVIGEIFTGALLTLFTLIFFLYGGD  185

Query  184  SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL  243
             IWQ+VT+  P   R RVR AG AG+ SLIGY RAT  VA  DA G+GAGLA++GVPLAL
Sbjct  186  QIWQFVTRIVPTDARRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGVPLAL  245

Query  244  PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM  303
            PLASLVF GAFIP++GA + GFLAV+VAL+ KG   ALI +G++I V QLEAH++QPL++
Sbjct  246  PLASLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQPLLL  305

Query  304  GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNP  352
            GRAV +HPLAVVLAI  G VLAG+VG LLAVP VA  N A++ LL  +P
Sbjct  306  GRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDP  354


>gi|343924432|ref|ZP_08763981.1| hypothetical protein GOALK_016_00300 [Gordonia alkanivorans NBRC 
16433]
 gi|343765576|dbj|GAA10907.1| hypothetical protein GOALK_016_00300 [Gordonia alkanivorans NBRC 
16433]
Length=426

 Score =  319 bits (817),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 178/347 (52%), Positives = 249/347 (72%), Gaps = 0/347 (0%)

Query  3    ASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPV  62
            ASLD A V P VR  A WAWR L++L        +  +FE ++VPV LA++++A+LVP V
Sbjct  17   ASLDRARVHPQVRAAAEWAWRLLLLLVTAYVAAKLFVEFEEVLVPVALAILVAAMLVPAV  76

Query  63   DWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIE  122
            D LD RG+P ++AV L +L     + G++TFVV +F+ G+P LV EV  +++  + WLIE
Sbjct  77   DALDRRGVPRSLAVLLNILLALGFIAGVMTFVVREFMRGVPQLVEEVSATVERTKSWLIE  136

Query  123  GPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGG  182
            GP  L  EQ+ NAG   ++ L++NQ ++TSGAL+TA T +E++T A+L LF LIFFLYGG
Sbjct  137  GPLDLDPEQVRNAGTDILDFLQHNQDRVTSGALATATTASEIITGALLTLFLLIFFLYGG  196

Query  183  RSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLA  242
              IW++ T   P   RDRV  AG AG+ +L+GY RAT  VA  DA G+G GLA++ VPLA
Sbjct  197  GQIWRFSTGVVPDGSRDRVWRAGIAGFGTLVGYVRATVAVAFVDACGIGVGLAILQVPLA  256

Query  243  LPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLV  302
            LPLASLVF GAFIP++GA+++G LAV+VAL+ +G   A++ + +++ V QLE+H+LQP +
Sbjct  257  LPLASLVFLGAFIPIVGALLSGSLAVLVALITQGWIAAVVALAIVVGVMQLESHVLQPFL  316

Query  303  MGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLG  349
            +GR+V +HP+AVVL IAAG V AG++G LLAVP +AF N A++ L G
Sbjct  317  LGRSVRLHPVAVVLGIAAGLVSAGIIGGLLAVPLIAFLNTAIRHLKG  363


>gi|54027467|ref|YP_121709.1| hypothetical protein nfa54930 [Nocardia farcinica IFM 10152]
 gi|54018975|dbj|BAD60345.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=422

 Score =  317 bits (813),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 191/358 (54%), Positives = 256/358 (72%), Gaps = 6/358 (1%)

Query  1    MSASLDDA------SVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALML  54
            MS   DDA      +V P+VR++A WAWR LV+ AA++A+  ++ K   +V+P+ +AL+ 
Sbjct  1    MSDPEDDAPRSAADAVHPIVRQSAEWAWRLLVVFAAVLAVAMLVQKLATVVIPMAIALLA  60

Query  55   SALLVPPVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSID  114
            +ALL P VD +   G+P  + V + L+    ++ GI+TFVV QF+AG+P L  EV  SI 
Sbjct  61   AALLAPLVDLMQRLGVPRWIGVFVSLVGSLGLVAGIMTFVVEQFVAGVPQLSDEVTASIH  120

Query  115  SARRWLIEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFT  174
              + WLI GP HL  EQI NAG+A ++A+++NQ  +TSGAL+TA  I  ++T   L LF 
Sbjct  121  KIQDWLINGPPHLSDEQIRNAGDALVKAIQSNQDSVTSGALTTATVIGHILTGTFLTLFI  180

Query  175  LIFFLYGGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGL  234
            LIFFLY G  IW++VT+  P   R+RVR AG  G+ +L+G+ RAT  VA  DA G+GAGL
Sbjct  181  LIFFLYSGDQIWEFVTRIVPTKHRERVRLAGELGFGTLVGFVRATVAVAAVDAIGIGAGL  240

Query  235  AVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLE  294
            A++GVPLALPLASLVF  AFIP+IGA +AGF+AV +AL+ KG+  ALI +G++IAV QLE
Sbjct  241  AILGVPLALPLASLVFISAFIPIIGAFLAGFIAVFIALVTKGLVTALIVLGIIIAVMQLE  300

Query  295  AHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNP  352
            +H+LQPL++GRAVSIHPLAVVLAIAAG VL G+ G LLAVP VA  N A++ LL  +P
Sbjct  301  SHVLQPLLLGRAVSIHPLAVVLAIAAGLVLGGIAGGLLAVPFVAVMNTAIRSLLAESP  358


>gi|330470380|ref|YP_004408123.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032]
 gi|328813351|gb|AEB47523.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032]
Length=433

 Score =  298 bits (763),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 160/346 (47%), Positives = 231/346 (67%), Gaps = 0/346 (0%)

Query  2    SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP  61
            ++S DDA V   +R  AAW+WR +V+     AL+ +++   ++++P+ +A++LSALL P 
Sbjct  68   TSSRDDADVPHALRIAAAWSWRLIVVGVVFWALVKLVSTISIVIIPLAVAMLLSALLAPA  127

Query  62   VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI  121
            V WL    LP ++A  +VL++G A + G LT VV++FI G+P L  +  + +   + WL 
Sbjct  128  VGWLLRARLPKSLATAVVLVAGLAAVVGTLTLVVNEFIKGVPELAAKSSQGLQQIQDWLK  187

Query  122  EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG  181
             GP HL    +D     A + + NN  + TSGALSTA T+ E++T  +LVLF   FFL  
Sbjct  188  TGPLHLSDNDLDRYLEEAQQWVNNNTEQFTSGALSTATTLAEVLTGTILVLFAAFFFLRD  247

Query  182  GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL  241
            G  IW++V +  P + R +V  AGRA +A+L+ Y RAT LVA  DA G+G  L +  +P 
Sbjct  248  GNMIWRFVVRLLPVAARWKVDDAGRASWATLVAYVRATVLVAFIDAVGIGIFLVIFDIPF  307

Query  242  ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL  301
            A PLA+LVF GAFIP+IGA ++G +AV+VAL+  G   ALI +G++I V Q+E H+LQPL
Sbjct  308  AFPLAALVFLGAFIPIIGATLSGGVAVLVALVDSGPVTALIILGVVIGVQQVEGHILQPL  367

Query  302  VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +MGRAV+IHPLAV++ +AAG VLAG+ GAL+AVP +A  N AV+ L
Sbjct  368  IMGRAVAIHPLAVIIGLAAGVVLAGITGALVAVPLIAVLNTAVRRL  413


>gi|238061336|ref|ZP_04606045.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149]
 gi|237883147|gb|EEP71975.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149]
Length=459

 Score =  295 bits (754),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 162/346 (47%), Positives = 226/346 (66%), Gaps = 0/346 (0%)

Query  2    SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP  61
            +AS DDA V   +R  AAW+WR +VI     ALL V+    ++++P+ +A++LSALL P 
Sbjct  94   TASRDDADVPHALRIAAAWSWRLIVIGVVFWALLKVVATISIVIIPLAVAMLLSALLAPA  153

Query  62   VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI  121
            V WL     P ++A  +VL+ G A + G LT VV++FI G+P L  +    +   + WL 
Sbjct  154  VGWLLRARFPRSLATAVVLVGGLAAVVGTLTLVVNEFIQGVPELSKKSSEGVRQIQDWLK  213

Query  122  EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG  181
             GP HL   Q+D     A   + NN  + TSGA+STAAT+ E++T  VLVLF   FFL  
Sbjct  214  TGPLHLSDSQLDRYIEEAPTWINNNTERFTSGAVSTAATLAEVLTGIVLVLFATFFFLRD  273

Query  182  GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL  241
            G  IW+++ +  P + R +V  AGRA + +L  Y RAT LVA  DA G+G  L +  +P 
Sbjct  274  GNRIWRFLVRLLPVAARWKVDDAGRASWETLGAYVRATVLVAFIDAVGIGTFLVIFDIPF  333

Query  242  ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL  301
            A PLA+LVF GAFIP++GA ++G +AV+VAL+  G   ALI +G++I V Q+E H+LQPL
Sbjct  334  AFPLAALVFLGAFIPIVGAALSGGVAVLVALVDSGPVTALIILGVVIGVQQVEGHVLQPL  393

Query  302  VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +MGRAV+IHPLAV++ IAAG VLAG+ GAL++VP +A  N AV+ L
Sbjct  394  IMGRAVAIHPLAVIIGIAAGVVLAGITGALVSVPLIAVLNTAVRRL  439


>gi|300791109|ref|YP_003771400.1| hypothetical protein AMED_9310 [Amycolatopsis mediterranei U32]
 gi|299800623|gb|ADJ50998.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
 gi|340532808|gb|AEK48013.1| hypothetical protein RAM_47740 [Amycolatopsis mediterranei S699]
Length=400

 Score =  289 bits (740),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 174/351 (50%), Positives = 242/351 (69%), Gaps = 1/351 (0%)

Query  14   VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA  73
            +R +AA AWR +V+ AA+  + WV+ +  V+V+P+ +AL+LSALL P V  L +   P  
Sbjct  25   LRISAALAWRLIVVAAALYVVGWVIGRLSVVVIPLGIALLLSALLAPAVQKLVAVRFPRG  84

Query  74   VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID  133
            +A  +VL++G AVLGG+LTFVV+QF +GLP L  ++  S++  + WLI GPAHLR EQI 
Sbjct  85   LATAIVLIAGLAVLGGLLTFVVTQFSSGLPQLQRQLNESLNQIKEWLINGPAHLRQEQIQ  144

Query  134  NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF  193
               N     L+NNQ+ LT  AL+TA+T+ E++T  +L LF  IFFL GG  IW ++ +  
Sbjct  145  QFINQVFGFLQNNQSWLTDTALTTASTVGEILTGFLLTLFITIFFLSGGEGIWTFLVRVA  204

Query  194  PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA  253
            P  VR+RV  AGR G+ASL+ Y RAT  VA+ DA G+G GL ++GVPL +PLA+LVF GA
Sbjct  205  PGRVRNRVDVAGRRGFASLVSYVRATAAVAVVDAVGIGIGLWIVGVPLVIPLATLVFLGA  264

Query  254  FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA  313
            FIP+IGAV+ G +AV++AL+  G   A+I + ++I V QLE+H+LQPL++GRAV +HPL+
Sbjct  265  FIPIIGAVLTGGVAVLIALVTNGFIGAVIVLAIVIGVMQLESHVLQPLLLGRAVKLHPLS  324

Query  314  VVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLL-GGNPFADVADVSSDH  363
            VVLAI  G V+ G+ GAL+AVP +A  N  V+ LL   NP     +V  D 
Sbjct  325  VVLAITVGLVVGGIAGALMAVPILAVLNAGVRSLLHEENPDPAEVNVLKDQ  375


>gi|159035990|ref|YP_001535243.1| hypothetical protein Sare_0322 [Salinispora arenicola CNS-205]
 gi|157914825|gb|ABV96252.1| protein of unknown function UPF0118 [Salinispora arenicola CNS-205]
Length=487

 Score =  283 bits (725),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 171/366 (47%), Positives = 237/366 (65%), Gaps = 4/366 (1%)

Query  2    SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP  61
            ++S DDA V   +R  AAW+WR L I     ALL ++ +  ++++P+ +AL+LSALL P 
Sbjct  122  TSSRDDADVPHALRVGAAWSWRLLAIGIVAWALLKIVGQIRIVIIPLAIALLLSALLAPA  181

Query  62   VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI  121
            V WL     P ++A  +VL+ G A + G LT VV++FI G+P L  +  + +   + WL 
Sbjct  182  VGWLFRARFPRSLATAVVLVGGLAAVVGTLTLVVNEFIQGVPELSEKSSQGVRQIQDWLR  241

Query  122  EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG  181
             GP HL   Q+DN  N A + + +N A LTSGALSTAAT+ E++T  +LVLF   FFL  
Sbjct  242  TGPLHLDDRQLDNYINEAEKWINDNTAGLTSGALSTAATLAEVLTGTILVLFATFFFLRD  301

Query  182  GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL  241
            G  IW+++ +  P + R +V  AGRA + +L  Y RAT LVA  DA G+G  L +  +P 
Sbjct  302  GGRIWRFLVRLLPVNARWKVDDAGRASWQTLGAYVRATVLVAFIDALGIGIFLVIFEIPF  361

Query  242  ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL  301
            A PLA+LVF  +FIP++GA ++G +AV+VAL+  G   ALI +G++I V QLE H+LQPL
Sbjct  362  AFPLAALVFLASFIPIVGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQPL  421

Query  302  VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL----LGGNPFADVA  357
            +MGRAV+IHPLAV++ IAAG VLAGV GAL+AVP +A  N AV+ L    +   P   V 
Sbjct  422  IMGRAVAIHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRLAARSVPETPSDAVV  481

Query  358  DVSSDH  363
             VS DH
Sbjct  482  VVSKDH  487


>gi|326383536|ref|ZP_08205222.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326197620|gb|EGD54808.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL 
B-59395]
Length=381

 Score =  282 bits (722),  Expect = 5e-74, Method: Compositional matrix adjust.
 Identities = 163/337 (49%), Positives = 220/337 (66%), Gaps = 0/337 (0%)

Query  8    ASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDS  67
            A V P VR  AAW WR L+I A + AL  +    E + VPV +A++LSALL P V WL  
Sbjct  19   AQVHPGVRAAAAWTWRLLIIAAGLYALGKLFLYAEEVFVPVAIAILLSALLSPLVAWLQR  78

Query  68   RGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHL  127
              +P +  V   ++  FA++   LTFVV Q I G+P +  +V  SI  ARRWL  G  HL
Sbjct  79   HRVPRSAGVLSAVVLTFAIIAAGLTFVVQQLIVGVPRMSGDVAASIAKARRWLETGRLHL  138

Query  128  RGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQ  187
              + + N  N  I  L+ ++A + +GAL TA   T+LVTAA+L +F LIFFLY G  IW 
Sbjct  139  DSDSLRNVSNDMITWLKEHEASIATGALDTATVATKLVTAALLTIFLLIFFLYDGHRIWD  198

Query  188  YVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLAS  247
            +VTK  P++ R  VR AG AGY +L  Y RAT LVA  DA  +G GLA++ VP+ +PL +
Sbjct  199  FVTKIVPSAHRVHVRGAGDAGYRTLQSYVRATVLVAFIDAVFIGIGLAILRVPMVMPLMA  258

Query  248  LVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAV  307
            L+F GAFIP++G+V AG LAV+VAL   G   A++ V +LI V Q+E H+LQP ++GR+V
Sbjct  259  LIFLGAFIPIVGSVAAGSLAVLVALATHGWFTAVLVVVVLIVVMQVEGHVLQPFLLGRSV  318

Query  308  SIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAV  344
             +HP+AV+L IA G ++AG+VG LLAVP +AF N A+
Sbjct  319  KLHPVAVILVIAIGLMVAGIVGGLLAVPVLAFANTAI  355


>gi|145592845|ref|YP_001157142.1| hypothetical protein Strop_0279 [Salinispora tropica CNB-440]
 gi|145302182|gb|ABP52764.1| protein of unknown function UPF0118 [Salinispora tropica CNB-440]
Length=423

 Score =  276 bits (706),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 167/346 (49%), Positives = 225/346 (66%), Gaps = 0/346 (0%)

Query  2    SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP  61
            + S DDA V   +R  AAW+WR L I     ALL V+ +  ++++P+ +AL+LSALL P 
Sbjct  58   TTSRDDADVPHALRVGAAWSWRLLAIGIVAWALLRVMGQVRIVIIPLAIALLLSALLAPA  117

Query  62   VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI  121
            V WL     P ++A  +VL+ G A + G LT VV++FI GLP L  +  + +   + WL 
Sbjct  118  VGWLLRARFPRSLATAVVLVGGLAAVIGTLTLVVNEFIQGLPVLGEKSSQGVRQIQNWLR  177

Query  122  EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG  181
             GP  L  EQ+D   N     L  N   LTSGALSTAAT+ E++T  +LVLF   FFL  
Sbjct  178  SGPLRLEDEQLDRYINDVEGWLNENIDGLTSGALSTAATVAEVLTGTILVLFATFFFLRD  237

Query  182  GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL  241
            G  IW+++ +  P + R +V  AGRA + +L  Y RAT LVA  DA G+G  L +  +P 
Sbjct  238  GNRIWRFLVRLMPVNARWKVDDAGRASWQTLGAYVRATVLVACIDALGIGIFLVIFEIPF  297

Query  242  ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL  301
            ALPLA+LVF  +FIP+IGA ++G +AV+VAL+  G   ALI +G++I V QLE H+LQPL
Sbjct  298  ALPLAALVFLASFIPIIGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQPL  357

Query  302  VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +MGRAV+IHPLAV++ IAAG VLAGV GAL+AVP +A  N AV+ L
Sbjct  358  IMGRAVAIHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRL  403


>gi|317507941|ref|ZP_07965636.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974]
 gi|316253752|gb|EFV13127.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974]
Length=382

 Score =  273 bits (699),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 174/344 (51%), Positives = 230/344 (67%), Gaps = 0/344 (0%)

Query  7    DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD  66
            D  V   +RK + W WR LV+L  +V L  +    EV+VVP+ LAL+L+AL+ P V WL 
Sbjct  19   DGHVHLTLRKLSDWTWRLLVLLLGLVVLGKLFILLEVVVVPIALALLLAALMSPLVGWLA  78

Query  67   SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH  126
            +R +P ++AV LVL+ G  +L G+ TF+V Q I G P L  +V +S +  R W      H
Sbjct  79   ARRVPRSLAVGLVLILGLGLLVGLFTFIVQQAINGWPTLQGQVFQSFEQLRIWAERAGLH  138

Query  127  LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW  186
               E++++  N  +     ++A +  G  STA+ + E VT   L LFTLIFFL  G+ IW
Sbjct  139  FSAEKLESLRNTTVNFAEQHRADIAGGVFSTASALVEGVTGFFLTLFTLIFFLSDGQEIW  198

Query  187  QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA  246
             Y+TK  P   RDRVRAAG AGY +L GY + T LVA  DA G+G GLA + VPLALPLA
Sbjct  199  YYLTKLVPEPARDRVRAAGGAGYRTLTGYVKGTALVAAADAIGIGIGLAALRVPLALPLA  258

Query  247  SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA  306
            SLVF GAFIP++G++VAG +AV+VAL+ +G   AL+T+ LL+ V QLE+H+LQPLV+GRA
Sbjct  259  SLVFLGAFIPVVGSLVAGLVAVLVALVTQGPVVALLTIALLVGVMQLESHVLQPLVLGRA  318

Query  307  VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGG  350
            V +HPLAV+LAIA G VLAG+VGALLAVP VA  N  +  L+ G
Sbjct  319  VKVHPLAVILAIATGVVLAGIVGALLAVPLVAVLNTFIGRLVRG  362


>gi|134103784|ref|YP_001109445.1| hypothetical protein SACE_7364 [Saccharopolyspora erythraea NRRL 
2338]
 gi|291005758|ref|ZP_06563731.1| hypothetical protein SeryN2_14654 [Saccharopolyspora erythraea 
NRRL 2338]
 gi|133916407|emb|CAM06520.1| protein of unknown function UPF0118 [Saccharopolyspora erythraea 
NRRL 2338]
Length=392

 Score =  273 bits (698),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 175/349 (51%), Positives = 240/349 (69%), Gaps = 8/349 (2%)

Query  6    DDASVA---PLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPV  62
            DDA+ A   PL R  AA +WR LVIL A+  L  ++++  V+V+PV +AL+L+ALL P V
Sbjct  10   DDAAGAIPRPL-RVGAALSWRLLVILGALYVLGMIVSRLFVVVIPVAIALLLAALLAPAV  68

Query  63   DWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIE  122
              L    +P A++  +VL+ G  V+GG+LTFV++ FI G P L  +V  S++  R WL  
Sbjct  69   GTLARYRVPRALSTAVVLVGGLGVVGGVLTFVINAFIEGFPQLQAQVVLSLNGIRDWLST  128

Query  123  GPAHLRGEQIDNAGNAAIEALRNNQAKLT----SGALSTAATITELVTAAVLVLFTLIFF  178
            GP HL  +QI      A E L+NNQA LT    SG L+TA T    +T  +L LFTLIFF
Sbjct  129  GPLHLNDQQITTYVEQAEEWLKNNQATLTQGVTSGVLTTAGTFGNFLTGLLLALFTLIFF  188

Query  179  LYGGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMG  238
            LY GR +W +V +  PA  RDR+  AG  G+ASL+GY RAT LVA+ DA G+  GL  +G
Sbjct  189  LYDGRRVWLFVIRIVPAENRDRIDRAGSRGFASLVGYVRATALVAVVDALGIWIGLVAVG  248

Query  239  VPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLL  298
            VPLA+PLA+LVF G F+P++GAV +G +AV+VAL+  G   ALI +G+++AV Q+E ++L
Sbjct  249  VPLAVPLAALVFLGGFVPIVGAVASGAVAVLVALVTNGWIAALIVLGVVLAVQQIEGNVL  308

Query  299  QPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            QPL++GRAV +H LAVVLAI+ G V++G++GALLAVP VA  N+A++ L
Sbjct  309  QPLLLGRAVQLHALAVVLAISVGVVISGIIGALLAVPLVAVLNSAIRSL  357


>gi|119962201|ref|YP_947065.1| permease [Arthrobacter aurescens TC1]
 gi|119949060|gb|ABM07971.1| putative permease [Arthrobacter aurescens TC1]
Length=426

 Score =  272 bits (695),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 151/336 (45%), Positives = 213/336 (64%), Gaps = 0/336 (0%)

Query  14   VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA  73
            VR  AAW+WR  +IL  + A++W+L K   +++PV++A +L+ LL P V WL +R +P+ 
Sbjct  23   VRIAAAWSWRAGLILLMIGAMVWLLGKVSFLIIPVMVAALLAGLLHPVVAWLRNRKVPNG  82

Query  74   VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID  133
             AV + +L    V+GG L  V  Q + G   L  E    I   + WL +GP HL  +QID
Sbjct  83   GAVAITVLGFIGVIGGALALVGRQLVTGFGALWQEALAGIQQIQTWLADGPLHLTADQID  142

Query  134  NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF  193
               +    AL+NN + + SGALS  +T        VL LF LIFFL  G  IW ++ +  
Sbjct  143  QYISDGANALQNNSSSILSGALSFGSTAGHFAAGLVLALFILIFFLLEGPRIWAFLVRLL  202

Query  194  PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA  253
            P S R     AGR G+ S++ Y R    VA  DA G+G G A++ VPLALPLA LVF G+
Sbjct  203  PKSARRATDGAGRRGWTSMVSYVRIQMFVAFVDAVGIGVGAAIIQVPLALPLAVLVFIGS  262

Query  254  FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA  313
            FIP++GA+V G +AV++AL+A G   ALI + +++ V QLE+H+LQPLVMG+AV++HP+A
Sbjct  263  FIPVVGALVTGAIAVLLALVANGPINALIMLAIVLVVQQLESHILQPLVMGKAVALHPVA  322

Query  314  VVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLG  349
            V+L++AAG  LAG+ GAL AVP +A  N AV+ + G
Sbjct  323  VILSVAAGSYLAGIPGALFAVPLLAVVNTAVRYIAG  358


>gi|116669725|ref|YP_830658.1| hypothetical protein Arth_1164 [Arthrobacter sp. FB24]
 gi|116609834|gb|ABK02558.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24]
Length=457

 Score =  268 bits (686),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 149/341 (44%), Positives = 218/341 (64%), Gaps = 0/341 (0%)

Query  7    DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD  66
            D  +   VR  A+WAWR  +IL  + AL+W+L+K   +++PV++A +L+ LL P   WL 
Sbjct  48   DQDIPYGVRIAASWAWRLGLILLVVAALIWMLSKISFLIIPVMVAALLAGLLSPVTRWLK  107

Query  67   SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH  126
            +R +P+  AV + +L    ++GG L  V  Q +AG   L +E    I   + WL +GP H
Sbjct  108  ARRVPNGGAVAITVLGFLGLIGGSLALVGRQLVAGFSELWSEALTGIQQIQGWLADGPLH  167

Query  127  LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW  186
            L   Q+D     A  AL+NN + + SGALS  +T        +L LF LIFFL  G  IW
Sbjct  168  LTAAQMDQYLQEATAALQNNSSSILSGALSFGSTAGHFAAGLILALFVLIFFLLEGDRIW  227

Query  187  QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA  246
             ++ +  P   R     AGR G+AS++ YAR    VA  DA G+G G A++GVPLALPL 
Sbjct  228  AFLVRLLPRKARAATFGAGRKGWASMVSYARIQMFVAFVDAVGIGVGAAIIGVPLALPLG  287

Query  247  SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA  306
             LVF G+FIP++GA+V G +AV++AL+A G   AL+ +G+++ V QLE+H+LQPLVMG+A
Sbjct  288  VLVFIGSFIPIVGALVTGAVAVLLALVANGWVNALVMLGIVLLVQQLESHILQPLVMGKA  347

Query  307  VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            V++HP+AV+L++AAG  LAG+ GAL +VP +A  N+A++ +
Sbjct  348  VALHPVAVILSVAAGSYLAGIPGALFSVPILAVANSAIRYI  388


>gi|298527597|ref|ZP_07015006.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497391|gb|EFI32685.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=146

 Score =  266 bits (680),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 145/146 (99%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  222  VALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL  281
            +ALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL
Sbjct  1    MALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL  60

Query  282  ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFN  341
            ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFN
Sbjct  61   ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFN  120

Query  342  NAVQVLLGGNPFADVADVSSDHLTEV  367
            NAVQVLLGGNPFADVADVSSDHLTEV
Sbjct  121  NAVQVLLGGNPFADVADVSSDHLTEV  146


>gi|315503542|ref|YP_004082429.1| hypothetical protein ML5_2759 [Micromonospora sp. L5]
 gi|315410161|gb|ADU08278.1| protein of unknown function UPF0118 [Micromonospora sp. L5]
Length=452

 Score =  266 bits (679),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 160/346 (47%), Positives = 224/346 (65%), Gaps = 0/346 (0%)

Query  2    SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP  61
            + S DD  V   +R  AAW WR +VI     ALL ++    ++++P+ +AL+LSALL P 
Sbjct  87   TVSRDDTEVPHALRIAAAWCWRLIVIGIVTWALLRIVGTISIVIIPLTVALLLSALLAPA  146

Query  62   VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI  121
            V WL    LP ++A  +VL+ G A + G LT VV++FI G+P L  +    +   + W  
Sbjct  147  VGWLLRARLPRSLATAVVLVGGLAAVVGTLTLVVNEFIKGVPELSQKSSEGVRQIQDWFK  206

Query  122  EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG  181
             GP HL   Q++   + A   +  N  + TSGA+STAAT+ E++T  VLVLF   FFL  
Sbjct  207  TGPLHLSDSQLNRYIDEAQNWINGNTERFTSGAISTAATLAEVLTGTVLVLFATFFFLRD  266

Query  182  GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL  241
            G +IW+++ +  P + R +V  AGRA +A+L  Y RAT LVA  DA G+G  L +  +P 
Sbjct  267  GNNIWRFLVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIGIFLVLFDIPF  326

Query  242  ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL  301
            A PLA+LVF GAFIP++GA ++G +AV+VAL+  G   ALI +G +I V Q+E H+LQPL
Sbjct  327  AFPLAALVFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQQVEGHVLQPL  386

Query  302  VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +MGRAV+IHPLAV++ IAAG VLAG+ GAL+AVP +A  N AV+ L
Sbjct  387  IMGRAVAIHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRRL  432


>gi|302870180|ref|YP_003838817.1| hypothetical protein Micau_5736 [Micromonospora aurantiaca ATCC 
27029]
 gi|302573039|gb|ADL49241.1| protein of unknown function UPF0118 [Micromonospora aurantiaca 
ATCC 27029]
Length=455

 Score =  265 bits (678),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 160/346 (47%), Positives = 224/346 (65%), Gaps = 0/346 (0%)

Query  2    SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP  61
            + S DD  V   +R  AAW WR +VI     ALL ++    ++++P+ +AL+LSALL P 
Sbjct  90   TVSRDDTEVPHALRIAAAWCWRLIVIGIVTWALLRIVGTISIVIIPLTVALLLSALLAPA  149

Query  62   VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI  121
            V WL    LP ++A  +VL+ G A + G LT VV++FI G+P L  +    +   + W  
Sbjct  150  VGWLLRARLPRSLATAVVLVGGLAAVVGTLTLVVNEFIKGVPELSQKSSEGVRQIQDWFK  209

Query  122  EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG  181
             GP HL   Q++   + A   +  N  + TSGA+STAAT+ E++T  VLVLF   FFL  
Sbjct  210  TGPLHLSDSQLNRYIDEAQNWINGNTERFTSGAISTAATLAEVLTGTVLVLFATFFFLRD  269

Query  182  GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL  241
            G +IW+++ +  P + R +V  AGRA +A+L  Y RAT LVA  DA G+G  L +  +P 
Sbjct  270  GNNIWRFLVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIGIFLVLFDIPF  329

Query  242  ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL  301
            A PLA+LVF GAFIP++GA ++G +AV+VAL+  G   ALI +G +I V Q+E H+LQPL
Sbjct  330  AFPLAALVFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQQVEGHVLQPL  389

Query  302  VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +MGRAV+IHPLAV++ IAAG VLAG+ GAL+AVP +A  N AV+ L
Sbjct  390  IMGRAVAIHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRRL  435


>gi|256381030|ref|YP_003104690.1| hypothetical protein Amir_7052 [Actinosynnema mirum DSM 43827]
 gi|255925333|gb|ACU40844.1| protein of unknown function UPF0118 [Actinosynnema mirum DSM 
43827]
Length=402

 Score =  264 bits (674),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 167/343 (49%), Positives = 242/343 (71%), Gaps = 0/343 (0%)

Query  6    DDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWL  65
            + + V PL+R +AA +WRF+ ++ A+  +   +     +++PV +AL+L+ALL P V  L
Sbjct  10   ESSKVPPLLRVSAALSWRFVAVVGALYIVSQAVGYMASVMIPVGIALLLAALLSPAVTQL  69

Query  66   DSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPA  125
               G+P  +A   VL+ G AV+GG+LTFV+++F  GLP L  +V  S+ + R WL +GP 
Sbjct  70   TRVGVPRGLATGFVLVGGLAVVGGVLTFVITEFSNGLPELQNQVTASLSTIRDWLKDGPL  129

Query  126  HLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSI  185
            HL   Q+    +  +E ++ NQ ++TSGAL+TAAT+ EL+T  VL LFTLIFFL+ G  I
Sbjct  130  HLSELQLQQYVDQLLETVKANQGEITSGALTTAATVGELLTGLVLALFTLIFFLHDGDGI  189

Query  186  WQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPL  245
            W+++T+  P  VR R   AGR G+ASL+ Y RAT +VA+ DA GVG GL ++GVPL +PL
Sbjct  190  WRFITRIVPRDVRARADLAGRRGFASLVSYVRATAVVAVVDAVGVGIGLWIVGVPLVVPL  249

Query  246  ASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGR  305
            A+LVF GAFIP++GAV+ G +AV++AL+A G   A + + +LI V QLE+H+LQPL++GR
Sbjct  250  AALVFLGAFIPIVGAVITGVVAVLIALVANGPVAAAVVLAILIGVMQLESHVLQPLLLGR  309

Query  306  AVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLL  348
            AV +HPLAVVLAI+ G V+AG+ GALL+VP +A  N+ ++ LL
Sbjct  310  AVKLHPLAVVLAISTGLVVAGIAGALLSVPLLAVLNSGIRSLL  352


>gi|257057886|ref|YP_003135718.1| putative permease [Saccharomonospora viridis DSM 43017]
 gi|256587758|gb|ACU98891.1| predicted permease [Saccharomonospora viridis DSM 43017]
Length=403

 Score =  263 bits (671),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 165/333 (50%), Positives = 229/333 (69%), Gaps = 0/333 (0%)

Query  15   RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV  74
            R  AA +WRFLV++AA+  ++W++     +VVPV +AL+L+ALL P V  L    +P  V
Sbjct  16   RVCAALSWRFLVVVAAIYVVVWLVGYLSFVVVPVAIALLLAALLAPAVQQLVKYRIPQPV  75

Query  75   AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN  134
            A  +VL+ G  ++G +LTFV++QF AGLP L  +V  S+D    WLI GP HLR  QI +
Sbjct  76   AAAIVLIGGLGIVGALLTFVITQFTAGLPALQEKVNSSLDRVNDWLINGPLHLRETQIVD  135

Query  135  AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP  194
              N A++ L+ NQA +   ALSTA  + E++T  +L L  L+FFL  G+ IW ++ +  P
Sbjct  136  FVNNAVDFLQENQAAIADSALSTAGAVGEILTGLLLTLVVLVFFLAHGQQIWNFLIRGVP  195

Query  195  ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF  254
            A VR RV  AGR G+ASL+ Y RAT  VA+ D  G+G GL ++GVPLA+PLA+LVF GAF
Sbjct  196  APVRKRVDLAGRRGFASLVSYVRATAAVAVVDGVGIGIGLWIVGVPLAIPLATLVFLGAF  255

Query  255  IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV  314
            IP+IGAVV G +AV+VAL+  G   ALI + +++ V QLE ++LQPL++GRAV +HPLAV
Sbjct  256  IPIIGAVVTGAVAVLVALVTNGFVTALIVLAIVVGVMQLEGNVLQPLLLGRAVRLHPLAV  315

Query  315  VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +LAI AG   AG+ GALL+VP +A  N+ ++ L
Sbjct  316  ILAITAGMTTAGITGALLSVPLLAVLNSGIKSL  348


>gi|331700348|ref|YP_004336587.1| hypothetical protein Psed_6646 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326955037|gb|AEA28734.1| protein of unknown function UPF0118 [Pseudonocardia dioxanivorans 
CB1190]
Length=493

 Score =  259 bits (661),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 171/333 (52%), Positives = 237/333 (72%), Gaps = 0/333 (0%)

Query  15   RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV  74
            R T+    R L+I AA   L++V+ +  V+VVPV +A++LSALL P V WL +R +P   
Sbjct  111  RVTSEVCARVLIIAAAFGLLVFVIIELRVVVVPVAIAVLLSALLAPVVHWLVARRVPRGP  170

Query  75   AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN  134
            A  LVL+ G A+LGG+L+FV++ FIAG P L  ++  S  S ++ L   P  +   Q+DN
Sbjct  171  ATFLVLIGGIALLGGLLSFVINTFIAGFPALQAQLTASFQSVQQLLAGPPLRIPTSQLDN  230

Query  135  AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP  194
                  +A+R+N+  LTSGAL+TAAT+TE+     L LF+LIFFLY G  IW+++ +A P
Sbjct  231  LPAQIEQAIRDNRDVLTSGALTTAATVTEIAAGLALTLFSLIFFLYDGPRIWRFLLRAAP  290

Query  195  ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF  254
             + R+RV  AGR  +ASL+GY RAT LVA+ DA G+G GL  +GVPL +PLA+LVF GAF
Sbjct  291  RARRERVDVAGRRAFASLVGYTRATVLVAIVDAVGIGIGLWAVGVPLVVPLAALVFLGAF  350

Query  255  IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV  314
            IP +GAVV G +AV++AL+A G+  ALI +G+++AV QLE H+LQPL++GRAVS+HPLAV
Sbjct  351  IPTVGAVVTGAVAVLIALVANGLIPALIILGVVVAVQQLEGHVLQPLLLGRAVSLHPLAV  410

Query  315  VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            VL++AAG V++G+ GALLAVP +A    AV+ L
Sbjct  411  VLSVAAGVVISGIAGALLAVPLLAVITAAVRSL  443


>gi|302531313|ref|ZP_07283655.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4]
 gi|302440208|gb|EFL12024.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4]
Length=406

 Score =  259 bits (661),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 162/308 (53%), Positives = 226/308 (74%), Gaps = 0/308 (0%)

Query  14   VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA  73
            +R +AA +WRF+V++AA+ A++W+L     +VVPV +AL+LSALL P V  L     P  
Sbjct  29   LRVSAALSWRFIVVIAALYAVVWLLGYLASVVVPVSIALLLSALLAPAVSRLVQIRFPRG  88

Query  74   VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID  133
            +A  +VL++G AVLGG+LTFV++QF +GLP L  ++  S++  + WLI GP HLR EQI 
Sbjct  89   LATAIVLVAGLAVLGGLLTFVITQFSSGLPELQQQLTTSLNQIKDWLINGPLHLRQEQIQ  148

Query  134  NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF  193
            +  N AI  L+NNQA LT+ AL+TA T+ E++T  VL LF  IFFL GG  IW ++ +  
Sbjct  149  DFINQAIGFLQNNQASLTTTALTTAGTVGEILTGFVLTLFVTIFFLAGGDGIWTFLVRGV  208

Query  194  PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA  253
            P  VR+RV  AGR G+ASL+ Y RAT  VA+ DA G+G GL ++GVPL +PLA+LVF GA
Sbjct  209  PQRVRNRVNVAGRRGFASLVSYIRATAAVAVVDAVGIGIGLWIVGVPLVIPLATLVFLGA  268

Query  254  FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA  313
            FIP+IGA++ G +AV++AL++KGI  A++ + +++ V QLE+H+LQPL++GRAV +HPLA
Sbjct  269  FIPIIGALITGGVAVLIALVSKGIIGAVVVLAIVVGVMQLESHVLQPLLLGRAVRLHPLA  328

Query  314  VVLAIAAG  321
            VVLAIA G
Sbjct  329  VVLAIAIG  336


>gi|300787453|ref|YP_003767744.1| hypothetical protein AMED_5588 [Amycolatopsis mediterranei U32]
 gi|299796967|gb|ADJ47342.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
 gi|340528972|gb|AEK44177.1| hypothetical protein RAM_28500 [Amycolatopsis mediterranei S699]
Length=389

 Score =  258 bits (659),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 158/333 (48%), Positives = 224/333 (68%), Gaps = 0/333 (0%)

Query  15   RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV  74
            R  AA AWR L++  A+  + +V  K   ++VPV +AL+L+ L  P V WL  + +P  +
Sbjct  26   RVAAAVAWRSLIVAGALTVVGFVAVKLASVLVPVAVALLLAGLFSPAVSWLAGKKVPRGL  85

Query  75   AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN  134
            A  +VL+ G  V GG++TFVV     G+P L+ +V  S+     WL  GP HL   Q+D 
Sbjct  86   AAAIVLVGGIGVAGGVVTFVVISVTVGMPALIDQVTASLTDLHTWLRTGPLHLSQVQLDE  145

Query  135  AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP  194
                    L  N++ + SGAL+TA T+ EL+  A+L +F LIFFL  GR IW +V +A P
Sbjct  146  MLGNLTATLGRNKSAIASGALTTAVTVGELLAEALLAVFCLIFFLAQGRVIWVFVLRAVP  205

Query  195  ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF  254
            A +R+RV  AGR+G+ +L  Y R T  VAL DAAG+  GL ++GVPLA PL++LVF GAF
Sbjct  206  AGLRNRVDVAGRSGFTTLAHYIRGTAAVALVDAAGISLGLVIIGVPLAAPLSALVFLGAF  265

Query  255  IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV  314
            +P+IG+V+AG +AV+VAL+A G+  A+I + +++ V QLE+H+LQPL++GRAV +HPLAV
Sbjct  266  VPVIGSVIAGAIAVLVALVANGVWAAVIVLAVVVGVMQLESHVLQPLLLGRAVRLHPLAV  325

Query  315  VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            VLA+  G V AG+VGALLAVP +A F++ V+ L
Sbjct  326  VLALTIGLVTAGIVGALLAVPLLAVFSSGVRSL  358


>gi|288919568|ref|ZP_06413898.1| protein of unknown function UPF0118 [Frankia sp. EUN1f]
 gi|288349074|gb|EFC83321.1| protein of unknown function UPF0118 [Frankia sp. EUN1f]
Length=401

 Score =  257 bits (656),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 143/328 (44%), Positives = 201/328 (62%), Gaps = 0/328 (0%)

Query  15   RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV  74
            R  A W+WR +VI  A+  L  ++ +   +V+PV+  L+++AL+ P        GLP   
Sbjct  57   RVAAGWSWRLIVIGTAVYILSMMVGRVRTVVIPVIAGLLIAALIHPLAQRFQRLGLPRLG  116

Query  75   AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN  134
            A    L+  F ++ G    V       +P +  +V   ID  R +L +GP HL   QID+
Sbjct  117  AAFAALIVFFLIVTGAGVAVGFNAANEIPAVADQVSEGIDQVRDYLTDGPFHLSEGQIDD  176

Query  135  AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP  194
              +   +++ +N+ KL SG LSTA+   E++T+ ++ LF+  FFLY G  IW ++   FP
Sbjct  177  LVDDIRKSITDNRGKLVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWDWIVTRFP  236

Query  195  ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF  254
            A   DRVR AGR  + ++ GY R T  VA  DA G+  GL  +G PL  PLA L FFG F
Sbjct  237  AGAEDRVRGAGREAWNTITGYIRGTVFVAAVDAIGITIGLLAVGAPLVAPLALLTFFGGF  296

Query  255  IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV  314
            IP+IGA VAG  AV+V L++ G+G ALI +G++IAV QLE HLLQPL+M RAV +HPLA+
Sbjct  297  IPIIGATVAGIAAVLVVLVSNGLGDALIILGVVIAVQQLEGHLLQPLIMRRAVRLHPLAI  356

Query  315  VLAIAAGGVLAGVVGALLAVPTVAFFNN  342
            V+A++AG VLAG+ GA+ AVP VA  N 
Sbjct  357  VIALSAGSVLAGIPGAIAAVPFVAVVNK  384


>gi|158317061|ref|YP_001509569.1| hypothetical protein Franean1_5305 [Frankia sp. EAN1pec]
 gi|158112466|gb|ABW14663.1| protein of unknown function UPF0118 [Frankia sp. EAN1pec]
Length=464

 Score =  250 bits (639),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 143/344 (42%), Positives = 205/344 (60%), Gaps = 0/344 (0%)

Query  15   RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV  74
            R  +AW+WR L+I  A+  L  ++ +  ++V+PV+  L+++AL+ P        G+P   
Sbjct  120  RVASAWSWRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIAALIHPIAHRFQRMGVPRLG  179

Query  75   AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN  134
            A    LL    ++ G    V       +P +  +V   +D  R +L +GP HL   QIDN
Sbjct  180  AAFAALLIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYLTDGPFHLSQGQIDN  239

Query  135  AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP  194
              +    ++ +N+ ++ SG LSTA+   E++T+ ++ LF+  FFLY G  IW ++   FP
Sbjct  240  LVDDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIVTRFP  299

Query  195  ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF  254
            +   DRVR AGR  + +L GY R T  VA  DA G+  GL  +G PL  PLA L FFG F
Sbjct  300  SGAEDRVRGAGREAWLTLTGYIRGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTFFGGF  359

Query  255  IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV  314
            IP++GA VAG  AV+VAL++ G+  ALI +G++IAV Q+E HLLQPLVM RAV +HPLA+
Sbjct  360  IPIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEGHLLQPLVMRRAVRLHPLAI  419

Query  315  VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVAD  358
            V+A++AGGVLAG+ GA+ AVP VA  N     L         AD
Sbjct  420  VIALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQPAD  463


>gi|330469076|ref|YP_004406819.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032]
 gi|328812047|gb|AEB46219.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032]
Length=416

 Score =  250 bits (638),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 157/346 (46%), Positives = 219/346 (64%), Gaps = 0/346 (0%)

Query  2    SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP  61
            + S DD+ V   +R  AAW+WR +VI     ALL  +    +++VP+L+AL+L+ALL P 
Sbjct  49   TTSRDDSDVPKALRIAAAWSWRLIVIGVVGWALLRFMGAIRIVIVPLLVALLLTALLAPA  108

Query  62   VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI  121
            V WL    +P ++A  +VL+SG   + G LT VV+QFI GLP L       I   + WL 
Sbjct  109  VGWLLRLRVPRSLATAVVLISGLGAVVGTLTLVVNQFIVGLPDLSVRAAAGIGQIQDWLR  168

Query  122  EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG  181
            +GP  L   Q++    A  + +  N   LTSGA++TA T+ E+ T  +LVLF + FFL  
Sbjct  169  DGPLGLSDGQLNGYVEAGQKWINENSQSLTSGAINTAGTVVEVFTGTLLVLFAMFFFLRD  228

Query  182  GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL  241
            G  IW+++    P + R R   AGRA + +L+ Y RAT LVA  DA G+G  L +  VP 
Sbjct  229  GDRIWRFLVGMLPVAARWRTDDAGRASWLTLVAYVRATVLVAFIDALGIGIALVLFDVPF  288

Query  242  ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL  301
            A PLA+LVF GAFIP++GA ++G +AV+VAL+  G   AL  +G +I V Q+E ++LQP 
Sbjct  289  AFPLAALVFLGAFIPIVGATLSGAVAVLVALVDSGWVTALAILGAVIVVQQVEGNVLQPW  348

Query  302  VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL  347
            +MGRAV++HPL VVLA+ AG VL G+VGAL+AVP +A  N AV+ L
Sbjct  349  IMGRAVALHPLPVVLAVTAGVVLDGIVGALVAVPLIAVLNTAVRRL  394



Lambda     K      H
   0.326    0.139    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 694383994300




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40