BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0205
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607346|ref|NP_214719.1| transmembrane protein [Mycobacteriu... 700 0.0
gi|148821398|ref|YP_001286152.1| transmembrane protein [Mycobact... 698 0.0
gi|289441581|ref|ZP_06431325.1| conserved membrane protein [Myco... 697 0.0
gi|31791383|ref|NP_853876.1| transmembrane protein [Mycobacteriu... 695 0.0
gi|289756269|ref|ZP_06515647.1| conserved transmembrane protein ... 525 4e-147
gi|240173428|ref|ZP_04752086.1| transmembrane protein [Mycobacte... 524 8e-147
gi|296167423|ref|ZP_06849824.1| transmembrane protein [Mycobacte... 509 2e-142
gi|254822894|ref|ZP_05227895.1| hypothetical protein MintA_23394... 499 4e-139
gi|254777409|ref|ZP_05218925.1| hypothetical protein MaviaA2_224... 497 1e-138
gi|342859339|ref|ZP_08715993.1| transmembrane protein [Mycobacte... 494 8e-138
gi|41409738|ref|NP_962574.1| hypothetical protein MAP3640 [Mycob... 490 1e-136
gi|183980476|ref|YP_001848767.1| transmembrane protein [Mycobact... 489 4e-136
gi|118466956|ref|YP_884090.1| hypothetical protein MAV_4969 [Myc... 488 4e-136
gi|108797149|ref|YP_637346.1| hypothetical protein Mmcs_0169 [My... 481 8e-134
gi|126432772|ref|YP_001068463.1| hypothetical protein Mjls_0159 ... 480 2e-133
gi|118471020|ref|YP_884664.1| integral membrane protein [Mycobac... 461 8e-128
gi|145221061|ref|YP_001131739.1| hypothetical protein Mflv_0457 ... 438 7e-121
gi|120401222|ref|YP_951051.1| hypothetical protein Mvan_0195 [My... 436 4e-120
gi|333988808|ref|YP_004521422.1| transmembrane protein [Mycobact... 429 3e-118
gi|169631595|ref|YP_001705244.1| hypothetical protein MAB_4521c ... 358 8e-97
gi|111022136|ref|YP_705108.1| hypothetical protein RHA1_ro05169 ... 351 9e-95
gi|226364629|ref|YP_002782411.1| hypothetical protein ROP_52190 ... 350 2e-94
gi|325677165|ref|ZP_08156832.1| integral membrane protein [Rhodo... 347 1e-93
gi|312141448|ref|YP_004008784.1| integral membrane protein [Rhod... 342 4e-92
gi|229494234|ref|ZP_04387997.1| integral membrane protein [Rhodo... 339 3e-91
gi|262204300|ref|YP_003275508.1| hypothetical protein Gbro_4482 ... 332 5e-89
gi|226304565|ref|YP_002764523.1| hypothetical protein RER_10760 ... 326 4e-87
gi|343924432|ref|ZP_08763981.1| hypothetical protein GOALK_016_0... 319 5e-85
gi|54027467|ref|YP_121709.1| hypothetical protein nfa54930 [Noca... 317 1e-84
gi|330470380|ref|YP_004408123.1| hypothetical protein VAB18032_0... 298 1e-78
gi|238061336|ref|ZP_04606045.1| hypothetical protein MCAG_02302 ... 295 1e-77
gi|300791109|ref|YP_003771400.1| hypothetical protein AMED_9310 ... 289 5e-76
gi|159035990|ref|YP_001535243.1| hypothetical protein Sare_0322 ... 283 2e-74
gi|326383536|ref|ZP_08205222.1| hypothetical protein SCNU_11385 ... 282 5e-74
gi|145592845|ref|YP_001157142.1| hypothetical protein Strop_0279... 276 4e-72
gi|317507941|ref|ZP_07965636.1| transmembrane protein [Segnilipa... 273 2e-71
gi|134103784|ref|YP_001109445.1| hypothetical protein SACE_7364 ... 273 3e-71
gi|119962201|ref|YP_947065.1| permease [Arthrobacter aurescens T... 272 8e-71
gi|116669725|ref|YP_830658.1| hypothetical protein Arth_1164 [Ar... 268 7e-70
gi|298527597|ref|ZP_07015006.1| conserved hypothetical protein [... 266 4e-69
gi|315503542|ref|YP_004082429.1| hypothetical protein ML5_2759 [... 266 6e-69
gi|302870180|ref|YP_003838817.1| hypothetical protein Micau_5736... 265 6e-69
gi|256381030|ref|YP_003104690.1| hypothetical protein Amir_7052 ... 264 2e-68
gi|257057886|ref|YP_003135718.1| putative permease [Saccharomono... 263 4e-68
gi|331700348|ref|YP_004336587.1| hypothetical protein Psed_6646 ... 259 6e-67
gi|302531313|ref|ZP_07283655.1| hypothetical protein SSMG_07695 ... 259 7e-67
gi|300787453|ref|YP_003767744.1| hypothetical protein AMED_5588 ... 258 1e-66
gi|288919568|ref|ZP_06413898.1| protein of unknown function UPF0... 257 3e-66
gi|158317061|ref|YP_001509569.1| hypothetical protein Franean1_5... 250 2e-64
gi|330469076|ref|YP_004406819.1| hypothetical protein VAB18032_2... 250 3e-64
>gi|15607346|ref|NP_214719.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|15839585|ref|NP_334622.1| hypothetical protein MT0215 [Mycobacterium tuberculosis CDC1551]
gi|148659969|ref|YP_001281492.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
54 more sequence titles
Length=367
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/367 (100%), Positives = 367/367 (100%), Gaps = 0/367 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS
Sbjct 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
Query 361 SDHLTEV 367
SDHLTEV
Sbjct 361 SDHLTEV 367
>gi|148821398|ref|YP_001286152.1| transmembrane protein [Mycobacterium tuberculosis F11]
gi|148719925|gb|ABR04550.1| conserved transmembrane protein [Mycobacterium tuberculosis F11]
Length=367
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/367 (99%), Positives = 366/367 (99%), Gaps = 0/367 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLL LMLSALLVP
Sbjct 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLVLMLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS
Sbjct 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
Query 361 SDHLTEV 367
SDHLTEV
Sbjct 361 SDHLTEV 367
>gi|289441581|ref|ZP_06431325.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289445737|ref|ZP_06435481.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289568108|ref|ZP_06448335.1| conserved membrane protein [Mycobacterium tuberculosis T17]
11 more sequence titles
Length=367
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/367 (99%), Positives = 366/367 (99%), Gaps = 0/367 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
PVDWLDSRGLP AVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct 61 PVDWLDSRGLPRAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS
Sbjct 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
Query 361 SDHLTEV 367
SDHLTEV
Sbjct 361 SDHLTEV 367
>gi|31791383|ref|NP_853876.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121636117|ref|YP_976340.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224988590|ref|YP_002643277.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|31616968|emb|CAD93075.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121491764|emb|CAL70226.1| Probable conserved transmembrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224771703|dbj|BAH24509.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341600133|emb|CCC62802.1| probable conserved transmembrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=367
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/367 (99%), Positives = 365/367 (99%), Gaps = 0/367 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
PVDWLDSRGLP AVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct 61 PVDWLDSRGLPRAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP
Sbjct 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPT AFFNNAVQVLLGGNPFADVADVS
Sbjct 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTAAFFNNAVQVLLGGNPFADVADVS 360
Query 361 SDHLTEV 367
SDHLTEV
Sbjct 361 SDHLTEV 367
>gi|289756269|ref|ZP_06515647.1| conserved transmembrane protein [Mycobacterium tuberculosis EAS054]
gi|289696856|gb|EFD64285.1| conserved transmembrane protein [Mycobacterium tuberculosis EAS054]
Length=280
Score = 525 bits (1352), Expect = 4e-147, Method: Compositional matrix adjust.
Identities = 274/277 (99%), Positives = 275/277 (99%), Gaps = 0/277 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP
Sbjct 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
PVDWLDSRGLP AVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL
Sbjct 61 PVDWLDSRGLPRAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP
Sbjct 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGI 277
LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAK +
Sbjct 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKAL 277
>gi|240173428|ref|ZP_04752086.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=384
Score = 524 bits (1350), Expect = 8e-147, Method: Compositional matrix adjust.
Identities = 288/354 (82%), Positives = 317/354 (90%), Gaps = 0/354 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSASLDDASV PLVRKTAAW+WR LVI AA +A++WV++K E+IVVPVLLAL+LSALLVP
Sbjct 1 MSASLDDASVTPLVRKTAAWSWRLLVIFAAALAVIWVISKLEIIVVPVLLALILSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD R +P AV+LVLL GFA+LGGIL FV+SQFI GLP LV +VERSIDS+RRWL
Sbjct 61 VVDWLDLRRVPRGAAVSLVLLGGFAILGGILAFVISQFIVGLPDLVKQVERSIDSSRRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
IEGPAHLR EQIDNAGNAAIEALRNNQAKLTSGA+STAATITEL+T AVLVLFTLIFFLY
Sbjct 121 IEGPAHLRREQIDNAGNAAIEALRNNQAKLTSGAISTAATITELLTGAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IWQYV K P RDRV AGRAGY+SLIGY RATFLVALTDA GVG GLA+MGVP
Sbjct 181 GGRNIWQYVVKIVPVPARDRVLEAGRAGYSSLIGYVRATFLVALTDAIGVGTGLAIMGVP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVF GAFIPL+GA+++G LAVVVALLAKG+ YALIT+GLLIAVNQLEAHLLQP
Sbjct 241 LALPLASLVFLGAFIPLLGALISGLLAVVVALLAKGLVYALITLGLLIAVNQLEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFA 354
LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA+QVLL +P A
Sbjct 301 LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAMQVLLAKDPAA 354
>gi|296167423|ref|ZP_06849824.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897232|gb|EFG76837.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=382
Score = 509 bits (1311), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 285/362 (79%), Positives = 316/362 (88%), Gaps = 0/362 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
M A+ DDASV PLVRKTAAWAWR LVIL A++ALLWV+ K EVI+VPVL+AL+LSALL+P
Sbjct 1 MPANTDDASVEPLVRKTAAWAWRLLVILFALLALLWVVKKLEVIIVPVLVALLLSALLLP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD RGLP AV LVLL+ F++LGGIL FVV+QFI GLP L +V RSI+S RRWL
Sbjct 61 VVDWLDRRGLPRGGAVALVLLTSFSLLGGILAFVVNQFIDGLPGLTEQVTRSIESIRRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
I+GPAHLR EQIDNAGNAAIEALRNNQAKL SGALSTAATITELVTAAVLVLFTLIFFLY
Sbjct 121 IDGPAHLRREQIDNAGNAAIEALRNNQAKLESGALSTAATITELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IW YV+K FPA VRDRV AGRAGY SL GY RATFLVALTDAAGVG GLA+MG+P
Sbjct 181 GGRNIWAYVSKIFPAHVRDRVSEAGRAGYGSLTGYVRATFLVALTDAAGVGTGLAIMGIP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVF GAFIPLIGA+V+G LAVVVALLAKG+ YALIT+GLLIAVNQLEAH+LQP
Sbjct 241 LALPLASLVFLGAFIPLIGALVSGLLAVVVALLAKGMVYALITLGLLIAVNQLEAHVLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPL VVLAI+ GGVLAG+VGALLAVPTVAF NNA+QVLL +P A+ +
Sbjct 301 LVMGRAVSIHPLGVVLAISTGGVLAGIVGALLAVPTVAFLNNAMQVLLAPDPAAEAEKQT 360
Query 361 SD 362
+
Sbjct 361 EE 362
>gi|254822894|ref|ZP_05227895.1| hypothetical protein MintA_23394 [Mycobacterium intracellulare
ATCC 13950]
Length=380
Score = 499 bits (1284), Expect = 4e-139, Method: Compositional matrix adjust.
Identities = 286/362 (80%), Positives = 315/362 (88%), Gaps = 0/362 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSA++DDASV P+VRKTAAWAWR LVILAA VALLWV+ K EVIVVPVL+AL+LSALLVP
Sbjct 1 MSANVDDASVEPVVRKTAAWAWRLLVILAAAVALLWVVKKLEVIVVPVLVALLLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD RGLP AV LVLL GFA+LGGIL FV+ QFI GLP L +V +SI+S RRWL
Sbjct 61 VVDWLDRRGLPRGGAVALVLLGGFAILGGILAFVILQFIDGLPGLTEQVTQSIESTRRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct 121 INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IW+YV + PA VRDRV AG AGY SLIGY RATFLVALTDAAGVG GLA+MG+P
Sbjct 181 GGRNIWRYVVQIIPAHVRDRVHEAGNAGYGSLIGYVRATFLVALTDAAGVGTGLAIMGIP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVF GAFIPLIGA+++G LAVVVALLAKGI YALIT+G+LIAVNQ+EAHLLQP
Sbjct 241 LALPLASLVFLGAFIPLIGALISGLLAVVVALLAKGIVYALITLGVLIAVNQMEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL NP A+ +
Sbjct 301 LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPEAEAEKQT 360
Query 361 SD 362
+
Sbjct 361 EE 362
>gi|254777409|ref|ZP_05218925.1| hypothetical protein MaviaA2_22461 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=382
Score = 497 bits (1280), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 286/362 (80%), Positives = 313/362 (87%), Gaps = 0/362 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSA++DDASV P+VRKTAAWAWR LVILAA +A+ WVL K EVIVVPVL+AL+LSALLVP
Sbjct 1 MSANVDDASVEPIVRKTAAWAWRLLVILAAALAVFWVLAKLEVIVVPVLVALLLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD GLP AV LVLL GFA+LGGIL FVV QFI GLP L +V +SI+S RRWL
Sbjct 61 VVDWLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct 121 INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IW+YV + PA R+RV AG AGY SLIGY RATFLVALTDAAGVGAGLA+MG+P
Sbjct 181 GGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGLAIMGIP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVF GAFIPL+GAVVAGFLAVVVALLAKGI YALIT+GLL+AVNQ+EAHLLQP
Sbjct 241 LALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL NP A+
Sbjct 301 LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSAEAVKQE 360
Query 361 SD 362
+
Sbjct 361 EE 362
>gi|342859339|ref|ZP_08715993.1| transmembrane protein [Mycobacterium colombiense CECT 3035]
gi|342133580|gb|EGT86783.1| transmembrane protein [Mycobacterium colombiense CECT 3035]
Length=382
Score = 494 bits (1273), Expect = 8e-138, Method: Compositional matrix adjust.
Identities = 284/362 (79%), Positives = 313/362 (87%), Gaps = 0/362 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSA+ DDASV PLVRKTAAWAWR LVIL A +ALLWV+ K EVIVVPVL+AL+LSALLVP
Sbjct 1 MSANADDASVEPLVRKTAAWAWRLLVILVAALALLWVVQKLEVIVVPVLVALLLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD RGLP AV LVLL GFA+LGGIL FV+ QFI GLP L +V +SI+S RRWL
Sbjct 61 VVDWLDKRGLPRGGAVALVLLGGFAILGGILAFVILQFIDGLPGLTEQVTQSIESTRRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct 121 IHGPAHLRNEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IWQYV + P VR RVR AG AGY SLIGY RATFLVALTDAAGVG GLA+MG+P
Sbjct 181 GGRNIWQYVLQIIPTGVRSRVREAGNAGYGSLIGYVRATFLVALTDAAGVGTGLAIMGIP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVF GAFIPLIGA+++G LAVVVALLAKGI YALIT+G+LIAVNQ+EAHLLQP
Sbjct 241 LALPLASLVFLGAFIPLIGALISGLLAVVVALLAKGIVYALITLGVLIAVNQIEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA+QVLL +P A+ +
Sbjct 301 LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNALQVLLAPDPSAEAEKQT 360
Query 361 SD 362
+
Sbjct 361 EE 362
>gi|41409738|ref|NP_962574.1| hypothetical protein MAP3640 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398570|gb|AAS06190.1| hypothetical protein MAP_3640 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460054|gb|EGO38963.1| putative permease [Mycobacterium avium subsp. paratuberculosis
S397]
Length=382
Score = 490 bits (1262), Expect = 1e-136, Method: Compositional matrix adjust.
Identities = 288/362 (80%), Positives = 313/362 (87%), Gaps = 0/362 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSA++DDASV P+VRKTAAWAWR LVILAA +AL WVL K EVIVVPVL+AL+LSALLVP
Sbjct 1 MSANVDDASVEPIVRKTAAWAWRLLVILAAALALFWVLAKLEVIVVPVLVALLLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD GLP AV LVLL GFA+LGGIL FVV QFI GLP L +V +SI+S RRWL
Sbjct 61 VVDWLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct 121 INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IW+YV + PA RDRV AG AGY SLIGY RATFLVALTDAAGVGAGLA+MG+P
Sbjct 181 GGRNIWRYVVQIVPAHARDRVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGLAIMGIP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVF GAFIPL+GAVVAGFLAVVVALLAKGI YALIT+GLL+AVNQ+EAHLLQP
Sbjct 241 LALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL NP A+
Sbjct 301 LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSAEAVKQE 360
Query 361 SD 362
+
Sbjct 361 EE 362
>gi|183980476|ref|YP_001848767.1| transmembrane protein [Mycobacterium marinum M]
gi|183173802|gb|ACC38912.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=389
Score = 489 bits (1258), Expect = 4e-136, Method: Compositional matrix adjust.
Identities = 292/364 (81%), Positives = 320/364 (88%), Gaps = 0/364 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSASLDDASVAPLVRKTAAW+WR LVILAA+VALL V+ K E+IVVPVLLALMLSALLVP
Sbjct 1 MSASLDDASVAPLVRKTAAWSWRLLVILAALVALLLVIKKLEIIVVPVLLALMLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD+RGLP AV+LVLL GF++LGGILTFV+SQFI GLP L +VE SIDS+R+WL
Sbjct 61 VVDWLDARGLPRGAAVSLVLLGGFSILGGILTFVISQFIVGLPDLAYQVEHSIDSSRKWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
IEGP HLR EQIDNAGNAAIEAL NNQAKLTSGA+STAATITEL+TAAVLVLFTLIFFLY
Sbjct 121 IEGPPHLRREQIDNAGNAAIEALHNNQAKLTSGAISTAATITELLTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IWQYV K PA VRDR AAGRAGY SLIGY RATFLVALTDAAGVG GLAVMGVP
Sbjct 181 GGRNIWQYVAKIIPAHVRDRAMAAGRAGYGSLIGYVRATFLVALTDAAGVGTGLAVMGVP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLAS+VF GAFIPLIGA+++G LAVVVALLAKG+ YAL+T+ LLI VNQLEAHLLQP
Sbjct 241 LALPLASIVFLGAFIPLIGALISGLLAVVVALLAKGLVYALLTLALLITVNQLEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPL VVLAI+ GGVLAG+VGALLAVPTVAF NNA++VLL +P A+
Sbjct 301 LVMGRAVSIHPLGVVLAISTGGVLAGIVGALLAVPTVAFLNNAMRVLLAEDPIAEAQQQD 360
Query 361 SDHL 364
D L
Sbjct 361 QDPL 364
>gi|118466956|ref|YP_884090.1| hypothetical protein MAV_4969 [Mycobacterium avium 104]
gi|118168243|gb|ABK69140.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=382
Score = 488 bits (1257), Expect = 4e-136, Method: Compositional matrix adjust.
Identities = 287/362 (80%), Positives = 313/362 (87%), Gaps = 0/362 (0%)
Query 1 MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVP 60
MSA++DDASV P+VRKTAAWAWR LVILAA +AL WVL K EVIVVPVL+AL+LSALLVP
Sbjct 1 MSANVDDASVEPIVRKTAAWAWRLLVILAAALALFWVLAKLEVIVVPVLVALLLSALLVP 60
Query 61 PVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWL 120
VDWLD GLP AV LVLL GFA+LGGIL FVV QFI GLP L +V +SI+S RRWL
Sbjct 61 VVDWLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRRWL 120
Query 121 IEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLY 180
I GPAHLR EQID+AGNAAIEAL NNQAKLTSGALSTAAT+TELVTAAVLVLFTLIFFLY
Sbjct 121 INGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFTLIFFLY 180
Query 181 GGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVP 240
GGR+IW+YV + PA R+RV AG AGY SLIGY RATFLVALTDAAGVGAGLA+MG+P
Sbjct 181 GGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGLAIMGIP 240
Query 241 LALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQP 300
LALPLASLVF GAFIPL+GAVVAGFLAVVVALLAKGI YALIT+GLL+AVNQ+EAHLLQP
Sbjct 241 LALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIEAHLLQP 300
Query 301 LVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVS 360
LVMGRAVSIHPLAVVLAI+ GGVLAG+VGALLAVPTVAF NNA QVLL NP A+
Sbjct 301 LVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSAEAVKQE 360
Query 361 SD 362
+
Sbjct 361 EE 362
>gi|108797149|ref|YP_637346.1| hypothetical protein Mmcs_0169 [Mycobacterium sp. MCS]
gi|119866234|ref|YP_936186.1| hypothetical protein Mkms_0178 [Mycobacterium sp. KMS]
gi|108767568|gb|ABG06290.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS]
gi|119692323|gb|ABL89396.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS]
Length=381
Score = 481 bits (1238), Expect = 8e-134, Method: Compositional matrix adjust.
Identities = 254/360 (71%), Positives = 300/360 (84%), Gaps = 0/360 (0%)
Query 4 SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD 63
SL+D SV+PLVRK AAW+WR L+I A+VA+LW++ + E+IVVPV LA ML+ALL+P VD
Sbjct 6 SLEDQSVSPLVRKAAAWSWRLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVD 65
Query 64 WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG 123
+LD RG P AV LVLLSG AV+GGILTFVVSQF+ G+P L +V RSID RRWL+EG
Sbjct 66 FLDRRGAPRGGAVALVLLSGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMRRWLVEG 125
Query 124 PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR 183
P L EQIDNAGNAAIEA+RNNQ +LTSGALSTA TITE+VT A+LVLFTLIF L+GGR
Sbjct 126 PLDLSREQIDNAGNAAIEAVRNNQERLTSGALSTAGTITEIVTGALLVLFTLIFLLHGGR 185
Query 184 SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL 243
+I+ ++TK FP VRDRVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+M VPLAL
Sbjct 186 NIFGFITKVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLAL 245
Query 244 PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM 303
PLASLVF GAF+PL+GAVV GFLAV+VALL KG+ YALIT+GL++AV QLE H+LQPLVM
Sbjct 246 PLASLVFLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVM 305
Query 304 GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDH 363
GRAVSIHPLAVVLAIA GGVLAG+VGALLAVP VAF N+A++VLL + A V ++ +D
Sbjct 306 GRAVSIHPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIRVLLARDQSAAVENLEADE 365
>gi|126432772|ref|YP_001068463.1| hypothetical protein Mjls_0159 [Mycobacterium sp. JLS]
gi|126232572|gb|ABN95972.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS]
Length=381
Score = 480 bits (1235), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 253/360 (71%), Positives = 300/360 (84%), Gaps = 0/360 (0%)
Query 4 SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD 63
SL+D SV+PLVRK AAW+WR L+I A+VA+LW++ + E+IVVPV LA ML+ALL+P VD
Sbjct 6 SLEDQSVSPLVRKAAAWSWRLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVD 65
Query 64 WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG 123
+LD RG P AV LVLLSG AV+GGILTFVVSQF+ G+P L +V RSID RRWL+EG
Sbjct 66 FLDRRGAPRGGAVALVLLSGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMRRWLVEG 125
Query 124 PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR 183
P L EQIDNAGNAAIEA+RNNQ +LTSGALSTA TITE+VT A+LVLFTLIF L+GGR
Sbjct 126 PLDLSREQIDNAGNAAIEAVRNNQERLTSGALSTAGTITEIVTGALLVLFTLIFLLHGGR 185
Query 184 SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL 243
+I+ ++T+ FP VRDRVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+M VPLAL
Sbjct 186 NIFGFITQVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLAL 245
Query 244 PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM 303
PLASLVF GAF+PL+GAVV GFLAV+VALL KG+ YALIT+GL++AV QLE H+LQPLVM
Sbjct 246 PLASLVFLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVM 305
Query 304 GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDH 363
GRAVSIHPLAVVLAIA GGVLAG+VGALLAVP VAF N+A++VLL + A V ++ +D
Sbjct 306 GRAVSIHPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIRVLLARDQAAAVENLETDE 365
>gi|118471020|ref|YP_884664.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118172307|gb|ABK73203.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=379
Score = 461 bits (1186), Expect = 8e-128, Method: Compositional matrix adjust.
Identities = 245/349 (71%), Positives = 291/349 (84%), Gaps = 0/349 (0%)
Query 7 DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD 66
D +V+PLVRK AAW+WR L+I A+VALLW++ + E++ VPV LA M++ALL+P VD++D
Sbjct 8 DEAVSPLVRKAAAWSWRLLIIGGAIVALLWLIKRLEILFVPVALATMVAALLLPAVDFMD 67
Query 67 SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH 126
RG P AV LVLL G AV+GGILTFVV+QFI G P LV ++ RSID R WLI+GP H
Sbjct 68 RRGAPRGSAVALVLLGGIAVVGGILTFVVTQFIQGAPDLVEQMTRSIDGVRNWLIDGPLH 127
Query 127 LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW 186
L EQID+AGN AIEAL+ NQ K+T+GALSTA T+TEL+T AVL LFTLIF L GGR+I+
Sbjct 128 LSKEQIDSAGNTAIEALQRNQEKVTTGALSTAGTLTELLTGAVLTLFTLIFLLQGGRNIF 187
Query 187 QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA 246
+VTKAFP VR+RVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+MG+PLALPLA
Sbjct 188 AFVTKAFPEDVRERVRDAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMGIPLALPLA 247
Query 247 SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA 306
SLVF GAF+PL+GAV+AGFLAVVVALLAKG+ YALIT+GL+IAV QLE H+LQPLVMGRA
Sbjct 248 SLVFLGAFVPLVGAVIAGFLAVVVALLAKGLVYALITLGLIIAVQQLEGHVLQPLVMGRA 307
Query 307 VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFAD 355
VSIHPLAVVLAIA GGVLAG+VGALLAVP VAF N+A +VLL +P A+
Sbjct 308 VSIHPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSATRVLLARDPHAE 356
>gi|145221061|ref|YP_001131739.1| hypothetical protein Mflv_0457 [Mycobacterium gilvum PYR-GCK]
gi|315441968|ref|YP_004074847.1| permease [Mycobacterium sp. Spyr1]
gi|145213547|gb|ABP42951.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK]
gi|315260271|gb|ADT97012.1| predicted permease [Mycobacterium sp. Spyr1]
Length=383
Score = 438 bits (1126), Expect = 7e-121, Method: Compositional matrix adjust.
Identities = 227/352 (65%), Positives = 283/352 (81%), Gaps = 0/352 (0%)
Query 4 SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD 63
S+ D SV PLVR AAW+WR LVI AA+V LLW++ + E++VVPV LA +++ALL+P VD
Sbjct 9 SIADDSVTPLVRMAAAWSWRLLVIFAAIVTLLWLVLRLEILVVPVALATIIAALLLPVVD 68
Query 64 WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG 123
+LD RG P AV LVLL+GFA+ GG+L FVV+QF+ G P LV +V SI+ +WL +G
Sbjct 69 FLDRRGAPRGGAVALVLLTGFALFGGLLAFVVTQFVEGAPDLVGQVSTSIEGVGKWLTDG 128
Query 124 PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR 183
P + +QI+ A + AIEAL++NQ KLTSGALSTA T+TE+VT A+LV FTLIF L+GGR
Sbjct 129 PLQVSDQQINQARDTAIEALQSNQEKLTSGALSTAGTLTEIVTGALLVFFTLIFLLHGGR 188
Query 184 SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL 243
+I+ +VT+ FP+ VR RV AGRAG+ SLIGY RATFLVA DA G+G GLA+MGVPLAL
Sbjct 189 NIFSFVTRIFPSHVRGRVHDAGRAGFRSLIGYVRATFLVAAVDAIGIGVGLAIMGVPLAL 248
Query 244 PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM 303
PLASLVF GAF+PL+GAVV GFLAV+VAL+AKG YALIT+GL+IAV QLE H+LQPLVM
Sbjct 249 PLASLVFMGAFVPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQQLEGHVLQPLVM 308
Query 304 GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFAD 355
GRAV+IHPLA+VLAIA G VLAG+VGALLAVP +AF N+A++VL +P A+
Sbjct 309 GRAVAIHPLAIVLAIAGGAVLAGIVGALLAVPVLAFLNSAIRVLTADDPVAE 360
>gi|120401222|ref|YP_951051.1| hypothetical protein Mvan_0195 [Mycobacterium vanbaalenii PYR-1]
gi|119954040|gb|ABM11045.1| protein of unknown function UPF0118 [Mycobacterium vanbaalenii
PYR-1]
Length=384
Score = 436 bits (1120), Expect = 4e-120, Method: Compositional matrix adjust.
Identities = 235/342 (69%), Positives = 283/342 (83%), Gaps = 0/342 (0%)
Query 7 DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD 66
D SV+PLVRK AAW+WR L+IL A+V LLW++ + E+IVVPV LA +L+ALL+P VD+LD
Sbjct 12 DDSVSPLVRKAAAWSWRLLLILGAIVTLLWLILRLEIIVVPVALATILAALLLPVVDFLD 71
Query 67 SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH 126
RG P AV LVLLSGFA+ GG+L FV++QF+ G P LV +V SI+ WL +GP
Sbjct 72 RRGAPRGGAVALVLLSGFALFGGLLAFVITQFVEGAPALVGQVTTSIEGVGTWLTDGPLD 131
Query 127 LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW 186
+ +QI+ +AAIEALR+NQ KLTSGALSTA T+TE+VT A+LVLFTLIF L+GGR+I+
Sbjct 132 VSPQQINQLRDAAIEALRSNQEKLTSGALSTAGTVTEIVTGALLVLFTLIFLLHGGRNIF 191
Query 187 QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA 246
+VTK FP VRDRVR AGRAG+ SLIGY RATFLVAL DA G+G GLA+MGVPLALPLA
Sbjct 192 AFVTKMFPVHVRDRVRDAGRAGFRSLIGYIRATFLVALVDATGIGVGLAIMGVPLALPLA 251
Query 247 SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA 306
SLVF GAFIPL+GAVV GFLAV+VAL+AKG YALIT+GL+IAV QLE H+LQPLVMGRA
Sbjct 252 SLVFLGAFIPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQQLEGHVLQPLVMGRA 311
Query 307 VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLL 348
V+IHPLA+VLAIA GGVLAG+VGALLAVP +AF N+A++VLL
Sbjct 312 VAIHPLAIVLAIAGGGVLAGIVGALLAVPALAFVNSAMRVLL 353
>gi|333988808|ref|YP_004521422.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333484777|gb|AEF34169.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=379
Score = 429 bits (1104), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 223/344 (65%), Positives = 275/344 (80%), Gaps = 0/344 (0%)
Query 14 VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA 73
+RK AAWAWR LV+ AA++ +L + + EVIVVPV LA+M+SALL+P VD LD G+P
Sbjct 1 MRKAAAWAWRLLVLFAAVLVVLLIARRLEVIVVPVALAMMMSALLLPGVDRLDRAGVPRG 60
Query 74 VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID 133
+AV L+LL+G AVL +L+FV+ +FI GLP LV +V + ++S + WLIEGP HL +QID
Sbjct 61 LAVFLLLLTGVAVLAALLSFVIDEFIDGLPELVEQVTQMVNSTQHWLIEGPLHLSSDQID 120
Query 134 NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF 193
AG I LRNNQAKLTSGALSTA TIT++ T A +VLFTLIFFLYGGR IW++ + F
Sbjct 121 KAGATVITELRNNQAKLTSGALSTAETITKIFTGAFVVLFTLIFFLYGGRDIWRFTVRFF 180
Query 194 PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA 253
P+ VR +V AAG AG+ SLIGY RATFLVAL DA G+G GLAVM VPLALPLASLVF GA
Sbjct 181 PSDVRAKVHAAGVAGFESLIGYIRATFLVALVDAVGIGIGLAVMAVPLALPLASLVFLGA 240
Query 254 FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA 313
FIPL+GAV+ G LAV+VAL+AKG YAL+T+GL++AVNQLEAH+LQPLVMGRA+SIHPLA
Sbjct 241 FIPLVGAVLTGLLAVLVALIAKGWIYALVTLGLIVAVNQLEAHVLQPLVMGRAMSIHPLA 300
Query 314 VVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVA 357
VVL I+ G +LAG+VGALLAVPT+AF + AV+VL+G + D A
Sbjct 301 VVLGISTGAILAGIVGALLAVPTIAFIDRAVRVLVGSHDAEDAA 344
>gi|169631595|ref|YP_001705244.1| hypothetical protein MAB_4521c [Mycobacterium abscessus ATCC
19977]
gi|169243562|emb|CAM64590.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=399
Score = 358 bits (919), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 200/358 (56%), Positives = 258/358 (73%), Gaps = 6/358 (1%)
Query 9 SVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR 68
SV P VRK AAWAWR LV+LA + +LW+ + I +P+LLALM SALLVP V++L
Sbjct 9 SVHPYVRKGAAWAWRLLVLLAFGLTVLWLFWHLKTITIPLLLALMGSALLVPTVNFLQRH 68
Query 69 GLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLR 128
+P ++AV +VLL+G A + GILTFVV QFI GLP L ++ SI+S + W I H+
Sbjct 69 KIPRSLAVVVVLLTGTAAIVGILTFVVDQFIKGLPDLSAQLTNSIESLKNWAIHSRFHIS 128
Query 129 GEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQY 188
+QI AG+A + +++NQ ++TSGAL+TA T+TE++T AVL LFT IFFLYGG+ IW++
Sbjct 129 EDQIGKAGDALVNTIKDNQGRVTSGALATATTVTEIITGAVLTLFTTIFFLYGGKEIWEF 188
Query 189 VTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASL 248
VT+ FP +VR RVR AG G+ SLIGY RAT VAL DA G+G GLA VPLALPLASL
Sbjct 189 VTRIFPTAVRPRVRRAGVLGFGSLIGYVRATVAVALVDAIGIGVGLAAFSVPLALPLASL 248
Query 249 VFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVS 308
VF GAFIP+IGA ++GF+AV +AL+ KG A + + ++I V Q+E H+LQPL+MG AV
Sbjct 249 VFLGAFIPIIGAAISGFVAVFIALITKGAFTAAMILVIVIVVMQVEGHVLQPLIMGHAVQ 308
Query 309 IHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDHLTE 366
IH LAVVLAIAAGGVL G++GALLAVPTVA N A++ L+ PF D +L E
Sbjct 309 IHALAVVLAIAAGGVLGGIIGALLAVPTVAVLNTAIRALI--EPF----DADDPYLRE 360
>gi|111022136|ref|YP_705108.1| hypothetical protein RHA1_ro05169 [Rhodococcus jostii RHA1]
gi|110821666|gb|ABG96950.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=421
Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 193/347 (56%), Positives = 256/347 (74%), Gaps = 0/347 (0%)
Query 8 ASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDS 67
ASV P+VR A W WR LVI A ++ L +++ + + +++PV LAL+ SALLVP VDWL +
Sbjct 22 ASVHPVVRVAAEWTWRLLVIFAGLLTLGYIVTRLDTVLIPVGLALLSSALLVPLVDWLQA 81
Query 68 RGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHL 127
+G+P + AV +VL+ ++ GI+TFVV QFI GLP L + E S+ + WL +GP H
Sbjct 82 KGVPRSAAVVVVLIGSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVTQIQGWLTDGPLHF 141
Query 128 RGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQ 187
+QI AG++ ++++++N+ +LTSGAL+TA + E+ T A+L LFTLIFFLYGG IW+
Sbjct 142 SEDQIRQAGDSVVKSIQDNRQQLTSGALTTATVVGEIFTGALLTLFTLIFFLYGGSQIWE 201
Query 188 YVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLAS 247
+VT+ P + R RVR AG G+ SLIGY RAT VA DA G+GAGLA++GVPLALPLAS
Sbjct 202 FVTRLVPTTSRRRVRLAGSQGFGSLIGYVRATVAVAAADAVGIGAGLAILGVPLALPLAS 261
Query 248 LVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAV 307
LVF GAFIP++GA + GFLAV+VAL+ KG ALI +G++I V QLEAH+LQPL++GRAV
Sbjct 262 LVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVLQPLLLGRAV 321
Query 308 SIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFA 354
+HPLAVVLAI G VLAG+VG LLAVP VA N AV+ LL +P A
Sbjct 322 RLHPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRSLLSTDPDA 368
>gi|226364629|ref|YP_002782411.1| hypothetical protein ROP_52190 [Rhodococcus opacus B4]
gi|226243118|dbj|BAH53466.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=427
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/356 (55%), Positives = 257/356 (73%), Gaps = 0/356 (0%)
Query 7 DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD 66
ASV P+VR A W WR LVI A ++ L +++ + + +++PV LAL+ SALLVP VDWL
Sbjct 43 SASVHPVVRVAAEWTWRLLVIFAGLLTLGYIVTRLDTVLIPVGLALLASALLVPLVDWLQ 102
Query 67 SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH 126
+G+P + AV +VL+ ++ GI+TFVV QFI GLP L + E S+ + WL +GP H
Sbjct 103 GKGVPRSAAVLVVLIGSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVTQIQGWLTDGPFH 162
Query 127 LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW 186
+QI AG++ +++++ N+ +LTSGAL+TA + E+ T A+L LFTLIFFLYGG IW
Sbjct 163 FSEDQIRQAGDSVVKSIQENRQQLTSGALTTATVVGEIFTGALLTLFTLIFFLYGGTQIW 222
Query 187 QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA 246
++VT+ P++ R RVR AG G+ SLIGY RAT VA DA G+GAGLA++GVPLALPLA
Sbjct 223 EFVTRLVPSTSRRRVRLAGSEGFGSLIGYVRATVAVAAADAVGIGAGLAILGVPLALPLA 282
Query 247 SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA 306
SLVF GAFIP++GA + GFLAV+VAL+ KG ALI +G++I V QLEAH+LQPL++GRA
Sbjct 283 SLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVLQPLLLGRA 342
Query 307 VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSD 362
V +HPLAVVLAI G VLAG+VG LLAVP VA N AV+ LL +P A + D
Sbjct 343 VRLHPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRSLLSADPEATYDALEVD 398
>gi|325677165|ref|ZP_08156832.1| integral membrane protein [Rhodococcus equi ATCC 33707]
gi|325552038|gb|EGD21733.1| integral membrane protein [Rhodococcus equi ATCC 33707]
Length=401
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/357 (54%), Positives = 256/357 (72%), Gaps = 2/357 (0%)
Query 9 SVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR 68
SV PLVR AAW WR LV+ A ++AL +V++K E +V+PV LAL+ +A L+P VD L R
Sbjct 18 SVHPLVRVGAAWTWRLLVLFAGLLALGYVVSKLESVVIPVALALLFAAFLMPAVDNLHRR 77
Query 69 GLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLR 128
G+P + AV + ++ ++G IL+FVV QF+ GLP L + S+ A+ WL +GP H
Sbjct 78 GVPRSAAVLVAVVGTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTKAQEWLTQGPLHFS 137
Query 129 GEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQY 188
+QI +AG+ ++A+++NQ LTSGAL+TA I E+ A L LFTL+FFLYGG +W++
Sbjct 138 EDQIRHAGDNVVKAIQSNQEALTSGALTTATVIGEIFAGAFLTLFTLVFFLYGGNQVWEF 197
Query 189 VTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASL 248
VT+ P + R RVR AGR G+ SL+ Y RAT VA DA G+GAGLA++GVPLALPLASL
Sbjct 198 VTRIIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGAGLAILGVPLALPLASL 257
Query 249 VFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVS 308
VF GAFIP++GA V GFLAV+VAL+ KG+ ALI +G+++ + QLE H+LQPL++GRAV
Sbjct 258 VFVGAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQLEGHVLQPLLLGRAVR 317
Query 309 IHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDHLT 365
+HPLAVVLAI G VLAG+VG LLAVP VAF N A++ L G+ D A+ + LT
Sbjct 318 LHPLAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGD--TDEAEEVYESLT 372
>gi|312141448|ref|YP_004008784.1| integral membrane protein [Rhodococcus equi 103S]
gi|311890787|emb|CBH50106.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=383
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/354 (54%), Positives = 253/354 (72%), Gaps = 2/354 (0%)
Query 12 PLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLP 71
PLVR AAW WR LV+ A ++AL +V++K E +V+PV LAL+ +A L+P VD RG+P
Sbjct 3 PLVRVGAAWTWRLLVLFAGLLALGYVVSKLESVVIPVALALLFAAFLMPAVDNQHRRGVP 62
Query 72 HAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQ 131
+ AV + ++ ++G IL+FVV QF+ GLP L + S+ A+ WL +GP H +Q
Sbjct 63 RSAAVLVAVVGTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTKAQEWLTQGPLHFSEDQ 122
Query 132 IDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTK 191
I +AG+ ++A+++NQ LTSGAL+TA I E+ A L LFTL+FFLYGG +W++VT+
Sbjct 123 IRHAGDNVVKAIQSNQEALTSGALTTATVIGEIFAGAFLTLFTLVFFLYGGNQVWEFVTR 182
Query 192 AFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFF 251
P + R RVR AGR G+ SL+ Y RAT VA DA G+GAGLA++GVPLALPLASLVF
Sbjct 183 IIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGAGLAILGVPLALPLASLVFV 242
Query 252 GAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHP 311
GAFIP++GA V GFLAV+VAL+ KG+ ALI +G+++ + QLE H+LQPL++GRAV +HP
Sbjct 243 GAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQLEGHVLQPLLLGRAVRLHP 302
Query 312 LAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDHLT 365
LAVVLAI G VLAG+VG LLAVP VAF N A++ L G+ D A+ + LT
Sbjct 303 LAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGD--TDEAEEVYESLT 354
>gi|229494234|ref|ZP_04387997.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229318596|gb|EEN84454.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length=392
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/349 (56%), Positives = 251/349 (72%), Gaps = 0/349 (0%)
Query 4 SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD 63
S D +V P VR A W+WR +VI A ++ L +V+ + E +++PV LAL+ SALL+P VD
Sbjct 6 SADARAVHPGVRIAAEWSWRLIVIFAGLLVLGYVVLRLETVLIPVGLALLTSALLIPIVD 65
Query 64 WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG 123
L G+P + AV +VLL+ ++ GI+TFVV QFI GLP L + S+ + WL G
Sbjct 66 RLQVWGVPRSAAVIVVLLASIGLVAGIMTFVVEQFIDGLPQLTDQFTASVTQIQNWLTSG 125
Query 124 PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR 183
P H +QI AG++ ++++++N+ LTSGAL+TA I E+ T A+L LFTLIFFLYGG
Sbjct 126 PLHFSEDQIRQAGDSVVKSVQSNRESLTSGALTTATVIGEIFTGALLTLFTLIFFLYGGD 185
Query 184 SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL 243
IWQ+VT+ P R RVR AG AG+ SLIGY RAT VA DA G+GAGLA++GVPLAL
Sbjct 186 QIWQFVTRIVPTDARRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGVPLAL 245
Query 244 PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM 303
PLASLVF GAFIP++GA + GFLAV+VAL+ KG ALI +G++I V QLEAH++QPL++
Sbjct 246 PLASLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQPLLL 305
Query 304 GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNP 352
GRAV +HPLAVVLAI G VLAG+VG LLAVP VA N A++ LL +P
Sbjct 306 GRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDP 354
>gi|262204300|ref|YP_003275508.1| hypothetical protein Gbro_4482 [Gordonia bronchialis DSM 43247]
gi|262087647|gb|ACY23615.1| protein of unknown function UPF0118 [Gordonia bronchialis DSM
43247]
Length=390
Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/336 (54%), Positives = 251/336 (75%), Gaps = 0/336 (0%)
Query 12 PLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLP 71
P VR A W+WR L+I AA LL + +FE ++VPV LA++ SA+LVP VD LD RG+P
Sbjct 3 PTVRAAAEWSWRLLIIAAAGFVLLRLFTEFEEVLVPVALAILGSAMLVPVVDALDRRGVP 62
Query 72 HAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQ 131
++AV V++ +L +LTFVV +FI G+P L +V ++D ++WL++GP H+ EQ
Sbjct 63 RSLAVLGVIVVALGILAAVLTFVVREFIRGVPELADQVRVTVDRTKQWLVDGPLHVDSEQ 122
Query 132 IDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTK 191
+ NAG+ + ++NNQ K+TSGAL+TA T +E+VT A+L LF LIFFLYGG IW+++ K
Sbjct 123 VRNAGSDVLNVVQNNQDKVTSGALATATTASEIVTGALLTLFLLIFFLYGGGQIWRFLVK 182
Query 192 AFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFF 251
P+ R RV AAG AG+ +L+GY RAT +VAL DA G+G GLA++ VPLALPLASLVF
Sbjct 183 GVPSGTRSRVWAAGIAGFGTLVGYVRATVVVALVDAIGIGIGLAILRVPLALPLASLVFL 242
Query 252 GAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHP 311
GAFIP++GA+++G LAV+VAL+ +G A+IT+ ++I V QLE+H+LQP ++GR+V +HP
Sbjct 243 GAFIPIVGALLSGTLAVLVALVTQGWIAAVITLAIVIGVMQLESHVLQPFLLGRSVRLHP 302
Query 312 LAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+AVVLAIAAG V AG++G LLAVP +AF N A++ L
Sbjct 303 VAVVLAIAAGLVSAGIIGGLLAVPLIAFLNTAIRHL 338
>gi|226304565|ref|YP_002764523.1| hypothetical protein RER_10760 [Rhodococcus erythropolis PR4]
gi|226183680|dbj|BAH31784.1| hypothetical membrane protein [Rhodococcus erythropolis PR4]
Length=392
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/349 (56%), Positives = 251/349 (72%), Gaps = 0/349 (0%)
Query 4 SLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVD 63
S D +V P VR A W+WR +VI A ++ L +V+ + E +++PV LAL+ SALL+P VD
Sbjct 6 SADARAVHPGVRIAAEWSWRLIVIFAGLLVLGYVVLRLETVLIPVGLALLASALLIPVVD 65
Query 64 WLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEG 123
L G+P + AV +VLL+ ++ GI+TFVV QFI GLP L + S+ + WL G
Sbjct 66 RLQVWGVPRSAAVIVVLLASIGLVAGIMTFVVEQFIDGLPQLTDQFTASVTQIQNWLTSG 125
Query 124 PAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGR 183
P H +QI AG++ ++++++N+ LTSGAL+TA I E+ T A+L LFTLIFFLYGG
Sbjct 126 PLHFSEDQIRQAGDSVVKSVQSNRESLTSGALTTATVIGEIFTGALLTLFTLIFFLYGGD 185
Query 184 SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL 243
IWQ+VT+ P R RVR AG AG+ SLIGY RAT VA DA G+GAGLA++GVPLAL
Sbjct 186 QIWQFVTRIVPTDARRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGVPLAL 245
Query 244 PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVM 303
PLASLVF GAFIP++GA + GFLAV+VAL+ KG ALI +G++I V QLEAH++QPL++
Sbjct 246 PLASLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQPLLL 305
Query 304 GRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNP 352
GRAV +HPLAVVLAI G VLAG+VG LLAVP VA N A++ LL +P
Sbjct 306 GRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDP 354
>gi|343924432|ref|ZP_08763981.1| hypothetical protein GOALK_016_00300 [Gordonia alkanivorans NBRC
16433]
gi|343765576|dbj|GAA10907.1| hypothetical protein GOALK_016_00300 [Gordonia alkanivorans NBRC
16433]
Length=426
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/347 (52%), Positives = 249/347 (72%), Gaps = 0/347 (0%)
Query 3 ASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPV 62
ASLD A V P VR A WAWR L++L + +FE ++VPV LA++++A+LVP V
Sbjct 17 ASLDRARVHPQVRAAAEWAWRLLLLLVTAYVAAKLFVEFEEVLVPVALAILVAAMLVPAV 76
Query 63 DWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIE 122
D LD RG+P ++AV L +L + G++TFVV +F+ G+P LV EV +++ + WLIE
Sbjct 77 DALDRRGVPRSLAVLLNILLALGFIAGVMTFVVREFMRGVPQLVEEVSATVERTKSWLIE 136
Query 123 GPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGG 182
GP L EQ+ NAG ++ L++NQ ++TSGAL+TA T +E++T A+L LF LIFFLYGG
Sbjct 137 GPLDLDPEQVRNAGTDILDFLQHNQDRVTSGALATATTASEIITGALLTLFLLIFFLYGG 196
Query 183 RSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLA 242
IW++ T P RDRV AG AG+ +L+GY RAT VA DA G+G GLA++ VPLA
Sbjct 197 GQIWRFSTGVVPDGSRDRVWRAGIAGFGTLVGYVRATVAVAFVDACGIGVGLAILQVPLA 256
Query 243 LPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLV 302
LPLASLVF GAFIP++GA+++G LAV+VAL+ +G A++ + +++ V QLE+H+LQP +
Sbjct 257 LPLASLVFLGAFIPIVGALLSGSLAVLVALITQGWIAAVVALAIVVGVMQLESHVLQPFL 316
Query 303 MGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLG 349
+GR+V +HP+AVVL IAAG V AG++G LLAVP +AF N A++ L G
Sbjct 317 LGRSVRLHPVAVVLGIAAGLVSAGIIGGLLAVPLIAFLNTAIRHLKG 363
>gi|54027467|ref|YP_121709.1| hypothetical protein nfa54930 [Nocardia farcinica IFM 10152]
gi|54018975|dbj|BAD60345.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=422
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 191/358 (54%), Positives = 256/358 (72%), Gaps = 6/358 (1%)
Query 1 MSASLDDA------SVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALML 54
MS DDA +V P+VR++A WAWR LV+ AA++A+ ++ K +V+P+ +AL+
Sbjct 1 MSDPEDDAPRSAADAVHPIVRQSAEWAWRLLVVFAAVLAVAMLVQKLATVVIPMAIALLA 60
Query 55 SALLVPPVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSID 114
+ALL P VD + G+P + V + L+ ++ GI+TFVV QF+AG+P L EV SI
Sbjct 61 AALLAPLVDLMQRLGVPRWIGVFVSLVGSLGLVAGIMTFVVEQFVAGVPQLSDEVTASIH 120
Query 115 SARRWLIEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFT 174
+ WLI GP HL EQI NAG+A ++A+++NQ +TSGAL+TA I ++T L LF
Sbjct 121 KIQDWLINGPPHLSDEQIRNAGDALVKAIQSNQDSVTSGALTTATVIGHILTGTFLTLFI 180
Query 175 LIFFLYGGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGL 234
LIFFLY G IW++VT+ P R+RVR AG G+ +L+G+ RAT VA DA G+GAGL
Sbjct 181 LIFFLYSGDQIWEFVTRIVPTKHRERVRLAGELGFGTLVGFVRATVAVAAVDAIGIGAGL 240
Query 235 AVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLE 294
A++GVPLALPLASLVF AFIP+IGA +AGF+AV +AL+ KG+ ALI +G++IAV QLE
Sbjct 241 AILGVPLALPLASLVFISAFIPIIGAFLAGFIAVFIALVTKGLVTALIVLGIIIAVMQLE 300
Query 295 AHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNP 352
+H+LQPL++GRAVSIHPLAVVLAIAAG VL G+ G LLAVP VA N A++ LL +P
Sbjct 301 SHVLQPLLLGRAVSIHPLAVVLAIAAGLVLGGIAGGLLAVPFVAVMNTAIRSLLAESP 358
>gi|330470380|ref|YP_004408123.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032]
gi|328813351|gb|AEB47523.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032]
Length=433
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/346 (47%), Positives = 231/346 (67%), Gaps = 0/346 (0%)
Query 2 SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP 61
++S DDA V +R AAW+WR +V+ AL+ +++ ++++P+ +A++LSALL P
Sbjct 68 TSSRDDADVPHALRIAAAWSWRLIVVGVVFWALVKLVSTISIVIIPLAVAMLLSALLAPA 127
Query 62 VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI 121
V WL LP ++A +VL++G A + G LT VV++FI G+P L + + + + WL
Sbjct 128 VGWLLRARLPKSLATAVVLVAGLAAVVGTLTLVVNEFIKGVPELAAKSSQGLQQIQDWLK 187
Query 122 EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG 181
GP HL +D A + + NN + TSGALSTA T+ E++T +LVLF FFL
Sbjct 188 TGPLHLSDNDLDRYLEEAQQWVNNNTEQFTSGALSTATTLAEVLTGTILVLFAAFFFLRD 247
Query 182 GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL 241
G IW++V + P + R +V AGRA +A+L+ Y RAT LVA DA G+G L + +P
Sbjct 248 GNMIWRFVVRLLPVAARWKVDDAGRASWATLVAYVRATVLVAFIDAVGIGIFLVIFDIPF 307
Query 242 ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL 301
A PLA+LVF GAFIP+IGA ++G +AV+VAL+ G ALI +G++I V Q+E H+LQPL
Sbjct 308 AFPLAALVFLGAFIPIIGATLSGGVAVLVALVDSGPVTALIILGVVIGVQQVEGHILQPL 367
Query 302 VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+MGRAV+IHPLAV++ +AAG VLAG+ GAL+AVP +A N AV+ L
Sbjct 368 IMGRAVAIHPLAVIIGLAAGVVLAGITGALVAVPLIAVLNTAVRRL 413
>gi|238061336|ref|ZP_04606045.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149]
gi|237883147|gb|EEP71975.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149]
Length=459
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/346 (47%), Positives = 226/346 (66%), Gaps = 0/346 (0%)
Query 2 SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP 61
+AS DDA V +R AAW+WR +VI ALL V+ ++++P+ +A++LSALL P
Sbjct 94 TASRDDADVPHALRIAAAWSWRLIVIGVVFWALLKVVATISIVIIPLAVAMLLSALLAPA 153
Query 62 VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI 121
V WL P ++A +VL+ G A + G LT VV++FI G+P L + + + WL
Sbjct 154 VGWLLRARFPRSLATAVVLVGGLAAVVGTLTLVVNEFIQGVPELSKKSSEGVRQIQDWLK 213
Query 122 EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG 181
GP HL Q+D A + NN + TSGA+STAAT+ E++T VLVLF FFL
Sbjct 214 TGPLHLSDSQLDRYIEEAPTWINNNTERFTSGAVSTAATLAEVLTGIVLVLFATFFFLRD 273
Query 182 GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL 241
G IW+++ + P + R +V AGRA + +L Y RAT LVA DA G+G L + +P
Sbjct 274 GNRIWRFLVRLLPVAARWKVDDAGRASWETLGAYVRATVLVAFIDAVGIGTFLVIFDIPF 333
Query 242 ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL 301
A PLA+LVF GAFIP++GA ++G +AV+VAL+ G ALI +G++I V Q+E H+LQPL
Sbjct 334 AFPLAALVFLGAFIPIVGAALSGGVAVLVALVDSGPVTALIILGVVIGVQQVEGHVLQPL 393
Query 302 VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+MGRAV+IHPLAV++ IAAG VLAG+ GAL++VP +A N AV+ L
Sbjct 394 IMGRAVAIHPLAVIIGIAAGVVLAGITGALVSVPLIAVLNTAVRRL 439
>gi|300791109|ref|YP_003771400.1| hypothetical protein AMED_9310 [Amycolatopsis mediterranei U32]
gi|299800623|gb|ADJ50998.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340532808|gb|AEK48013.1| hypothetical protein RAM_47740 [Amycolatopsis mediterranei S699]
Length=400
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 174/351 (50%), Positives = 242/351 (69%), Gaps = 1/351 (0%)
Query 14 VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA 73
+R +AA AWR +V+ AA+ + WV+ + V+V+P+ +AL+LSALL P V L + P
Sbjct 25 LRISAALAWRLIVVAAALYVVGWVIGRLSVVVIPLGIALLLSALLAPAVQKLVAVRFPRG 84
Query 74 VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID 133
+A +VL++G AVLGG+LTFVV+QF +GLP L ++ S++ + WLI GPAHLR EQI
Sbjct 85 LATAIVLIAGLAVLGGLLTFVVTQFSSGLPQLQRQLNESLNQIKEWLINGPAHLRQEQIQ 144
Query 134 NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF 193
N L+NNQ+ LT AL+TA+T+ E++T +L LF IFFL GG IW ++ +
Sbjct 145 QFINQVFGFLQNNQSWLTDTALTTASTVGEILTGFLLTLFITIFFLSGGEGIWTFLVRVA 204
Query 194 PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA 253
P VR+RV AGR G+ASL+ Y RAT VA+ DA G+G GL ++GVPL +PLA+LVF GA
Sbjct 205 PGRVRNRVDVAGRRGFASLVSYVRATAAVAVVDAVGIGIGLWIVGVPLVIPLATLVFLGA 264
Query 254 FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA 313
FIP+IGAV+ G +AV++AL+ G A+I + ++I V QLE+H+LQPL++GRAV +HPL+
Sbjct 265 FIPIIGAVLTGGVAVLIALVTNGFIGAVIVLAIVIGVMQLESHVLQPLLLGRAVKLHPLS 324
Query 314 VVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLL-GGNPFADVADVSSDH 363
VVLAI G V+ G+ GAL+AVP +A N V+ LL NP +V D
Sbjct 325 VVLAITVGLVVGGIAGALMAVPILAVLNAGVRSLLHEENPDPAEVNVLKDQ 375
>gi|159035990|ref|YP_001535243.1| hypothetical protein Sare_0322 [Salinispora arenicola CNS-205]
gi|157914825|gb|ABV96252.1| protein of unknown function UPF0118 [Salinispora arenicola CNS-205]
Length=487
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/366 (47%), Positives = 237/366 (65%), Gaps = 4/366 (1%)
Query 2 SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP 61
++S DDA V +R AAW+WR L I ALL ++ + ++++P+ +AL+LSALL P
Sbjct 122 TSSRDDADVPHALRVGAAWSWRLLAIGIVAWALLKIVGQIRIVIIPLAIALLLSALLAPA 181
Query 62 VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI 121
V WL P ++A +VL+ G A + G LT VV++FI G+P L + + + + WL
Sbjct 182 VGWLFRARFPRSLATAVVLVGGLAAVVGTLTLVVNEFIQGVPELSEKSSQGVRQIQDWLR 241
Query 122 EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG 181
GP HL Q+DN N A + + +N A LTSGALSTAAT+ E++T +LVLF FFL
Sbjct 242 TGPLHLDDRQLDNYINEAEKWINDNTAGLTSGALSTAATLAEVLTGTILVLFATFFFLRD 301
Query 182 GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL 241
G IW+++ + P + R +V AGRA + +L Y RAT LVA DA G+G L + +P
Sbjct 302 GGRIWRFLVRLLPVNARWKVDDAGRASWQTLGAYVRATVLVAFIDALGIGIFLVIFEIPF 361
Query 242 ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL 301
A PLA+LVF +FIP++GA ++G +AV+VAL+ G ALI +G++I V QLE H+LQPL
Sbjct 362 AFPLAALVFLASFIPIVGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQPL 421
Query 302 VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL----LGGNPFADVA 357
+MGRAV+IHPLAV++ IAAG VLAGV GAL+AVP +A N AV+ L + P V
Sbjct 422 IMGRAVAIHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRLAARSVPETPSDAVV 481
Query 358 DVSSDH 363
VS DH
Sbjct 482 VVSKDH 487
>gi|326383536|ref|ZP_08205222.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197620|gb|EGD54808.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL
B-59395]
Length=381
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/337 (49%), Positives = 220/337 (66%), Gaps = 0/337 (0%)
Query 8 ASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDS 67
A V P VR AAW WR L+I A + AL + E + VPV +A++LSALL P V WL
Sbjct 19 AQVHPGVRAAAAWTWRLLIIAAGLYALGKLFLYAEEVFVPVAIAILLSALLSPLVAWLQR 78
Query 68 RGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHL 127
+P + V ++ FA++ LTFVV Q I G+P + +V SI ARRWL G HL
Sbjct 79 HRVPRSAGVLSAVVLTFAIIAAGLTFVVQQLIVGVPRMSGDVAASIAKARRWLETGRLHL 138
Query 128 RGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQ 187
+ + N N I L+ ++A + +GAL TA T+LVTAA+L +F LIFFLY G IW
Sbjct 139 DSDSLRNVSNDMITWLKEHEASIATGALDTATVATKLVTAALLTIFLLIFFLYDGHRIWD 198
Query 188 YVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLAS 247
+VTK P++ R VR AG AGY +L Y RAT LVA DA +G GLA++ VP+ +PL +
Sbjct 199 FVTKIVPSAHRVHVRGAGDAGYRTLQSYVRATVLVAFIDAVFIGIGLAILRVPMVMPLMA 258
Query 248 LVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAV 307
L+F GAFIP++G+V AG LAV+VAL G A++ V +LI V Q+E H+LQP ++GR+V
Sbjct 259 LIFLGAFIPIVGSVAAGSLAVLVALATHGWFTAVLVVVVLIVVMQVEGHVLQPFLLGRSV 318
Query 308 SIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAV 344
+HP+AV+L IA G ++AG+VG LLAVP +AF N A+
Sbjct 319 KLHPVAVILVIAIGLMVAGIVGGLLAVPVLAFANTAI 355
>gi|145592845|ref|YP_001157142.1| hypothetical protein Strop_0279 [Salinispora tropica CNB-440]
gi|145302182|gb|ABP52764.1| protein of unknown function UPF0118 [Salinispora tropica CNB-440]
Length=423
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/346 (49%), Positives = 225/346 (66%), Gaps = 0/346 (0%)
Query 2 SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP 61
+ S DDA V +R AAW+WR L I ALL V+ + ++++P+ +AL+LSALL P
Sbjct 58 TTSRDDADVPHALRVGAAWSWRLLAIGIVAWALLRVMGQVRIVIIPLAIALLLSALLAPA 117
Query 62 VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI 121
V WL P ++A +VL+ G A + G LT VV++FI GLP L + + + + WL
Sbjct 118 VGWLLRARFPRSLATAVVLVGGLAAVIGTLTLVVNEFIQGLPVLGEKSSQGVRQIQNWLR 177
Query 122 EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG 181
GP L EQ+D N L N LTSGALSTAAT+ E++T +LVLF FFL
Sbjct 178 SGPLRLEDEQLDRYINDVEGWLNENIDGLTSGALSTAATVAEVLTGTILVLFATFFFLRD 237
Query 182 GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL 241
G IW+++ + P + R +V AGRA + +L Y RAT LVA DA G+G L + +P
Sbjct 238 GNRIWRFLVRLMPVNARWKVDDAGRASWQTLGAYVRATVLVACIDALGIGIFLVIFEIPF 297
Query 242 ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL 301
ALPLA+LVF +FIP+IGA ++G +AV+VAL+ G ALI +G++I V QLE H+LQPL
Sbjct 298 ALPLAALVFLASFIPIIGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQPL 357
Query 302 VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+MGRAV+IHPLAV++ IAAG VLAGV GAL+AVP +A N AV+ L
Sbjct 358 IMGRAVAIHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRL 403
>gi|317507941|ref|ZP_07965636.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974]
gi|316253752|gb|EFV13127.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974]
Length=382
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/344 (51%), Positives = 230/344 (67%), Gaps = 0/344 (0%)
Query 7 DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD 66
D V +RK + W WR LV+L +V L + EV+VVP+ LAL+L+AL+ P V WL
Sbjct 19 DGHVHLTLRKLSDWTWRLLVLLLGLVVLGKLFILLEVVVVPIALALLLAALMSPLVGWLA 78
Query 67 SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH 126
+R +P ++AV LVL+ G +L G+ TF+V Q I G P L +V +S + R W H
Sbjct 79 ARRVPRSLAVGLVLILGLGLLVGLFTFIVQQAINGWPTLQGQVFQSFEQLRIWAERAGLH 138
Query 127 LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW 186
E++++ N + ++A + G STA+ + E VT L LFTLIFFL G+ IW
Sbjct 139 FSAEKLESLRNTTVNFAEQHRADIAGGVFSTASALVEGVTGFFLTLFTLIFFLSDGQEIW 198
Query 187 QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA 246
Y+TK P RDRVRAAG AGY +L GY + T LVA DA G+G GLA + VPLALPLA
Sbjct 199 YYLTKLVPEPARDRVRAAGGAGYRTLTGYVKGTALVAAADAIGIGIGLAALRVPLALPLA 258
Query 247 SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA 306
SLVF GAFIP++G++VAG +AV+VAL+ +G AL+T+ LL+ V QLE+H+LQPLV+GRA
Sbjct 259 SLVFLGAFIPVVGSLVAGLVAVLVALVTQGPVVALLTIALLVGVMQLESHVLQPLVLGRA 318
Query 307 VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGG 350
V +HPLAV+LAIA G VLAG+VGALLAVP VA N + L+ G
Sbjct 319 VKVHPLAVILAIATGVVLAGIVGALLAVPLVAVLNTFIGRLVRG 362
>gi|134103784|ref|YP_001109445.1| hypothetical protein SACE_7364 [Saccharopolyspora erythraea NRRL
2338]
gi|291005758|ref|ZP_06563731.1| hypothetical protein SeryN2_14654 [Saccharopolyspora erythraea
NRRL 2338]
gi|133916407|emb|CAM06520.1| protein of unknown function UPF0118 [Saccharopolyspora erythraea
NRRL 2338]
Length=392
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 175/349 (51%), Positives = 240/349 (69%), Gaps = 8/349 (2%)
Query 6 DDASVA---PLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPV 62
DDA+ A PL R AA +WR LVIL A+ L ++++ V+V+PV +AL+L+ALL P V
Sbjct 10 DDAAGAIPRPL-RVGAALSWRLLVILGALYVLGMIVSRLFVVVIPVAIALLLAALLAPAV 68
Query 63 DWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIE 122
L +P A++ +VL+ G V+GG+LTFV++ FI G P L +V S++ R WL
Sbjct 69 GTLARYRVPRALSTAVVLVGGLGVVGGVLTFVINAFIEGFPQLQAQVVLSLNGIRDWLST 128
Query 123 GPAHLRGEQIDNAGNAAIEALRNNQAKLT----SGALSTAATITELVTAAVLVLFTLIFF 178
GP HL +QI A E L+NNQA LT SG L+TA T +T +L LFTLIFF
Sbjct 129 GPLHLNDQQITTYVEQAEEWLKNNQATLTQGVTSGVLTTAGTFGNFLTGLLLALFTLIFF 188
Query 179 LYGGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMG 238
LY GR +W +V + PA RDR+ AG G+ASL+GY RAT LVA+ DA G+ GL +G
Sbjct 189 LYDGRRVWLFVIRIVPAENRDRIDRAGSRGFASLVGYVRATALVAVVDALGIWIGLVAVG 248
Query 239 VPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLL 298
VPLA+PLA+LVF G F+P++GAV +G +AV+VAL+ G ALI +G+++AV Q+E ++L
Sbjct 249 VPLAVPLAALVFLGGFVPIVGAVASGAVAVLVALVTNGWIAALIVLGVVLAVQQIEGNVL 308
Query 299 QPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
QPL++GRAV +H LAVVLAI+ G V++G++GALLAVP VA N+A++ L
Sbjct 309 QPLLLGRAVQLHALAVVLAISVGVVISGIIGALLAVPLVAVLNSAIRSL 357
>gi|119962201|ref|YP_947065.1| permease [Arthrobacter aurescens TC1]
gi|119949060|gb|ABM07971.1| putative permease [Arthrobacter aurescens TC1]
Length=426
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/336 (45%), Positives = 213/336 (64%), Gaps = 0/336 (0%)
Query 14 VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA 73
VR AAW+WR +IL + A++W+L K +++PV++A +L+ LL P V WL +R +P+
Sbjct 23 VRIAAAWSWRAGLILLMIGAMVWLLGKVSFLIIPVMVAALLAGLLHPVVAWLRNRKVPNG 82
Query 74 VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID 133
AV + +L V+GG L V Q + G L E I + WL +GP HL +QID
Sbjct 83 GAVAITVLGFIGVIGGALALVGRQLVTGFGALWQEALAGIQQIQTWLADGPLHLTADQID 142
Query 134 NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF 193
+ AL+NN + + SGALS +T VL LF LIFFL G IW ++ +
Sbjct 143 QYISDGANALQNNSSSILSGALSFGSTAGHFAAGLVLALFILIFFLLEGPRIWAFLVRLL 202
Query 194 PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA 253
P S R AGR G+ S++ Y R VA DA G+G G A++ VPLALPLA LVF G+
Sbjct 203 PKSARRATDGAGRRGWTSMVSYVRIQMFVAFVDAVGIGVGAAIIQVPLALPLAVLVFIGS 262
Query 254 FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA 313
FIP++GA+V G +AV++AL+A G ALI + +++ V QLE+H+LQPLVMG+AV++HP+A
Sbjct 263 FIPVVGALVTGAIAVLLALVANGPINALIMLAIVLVVQQLESHILQPLVMGKAVALHPVA 322
Query 314 VVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLG 349
V+L++AAG LAG+ GAL AVP +A N AV+ + G
Sbjct 323 VILSVAAGSYLAGIPGALFAVPLLAVVNTAVRYIAG 358
>gi|116669725|ref|YP_830658.1| hypothetical protein Arth_1164 [Arthrobacter sp. FB24]
gi|116609834|gb|ABK02558.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24]
Length=457
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/341 (44%), Positives = 218/341 (64%), Gaps = 0/341 (0%)
Query 7 DASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLD 66
D + VR A+WAWR +IL + AL+W+L+K +++PV++A +L+ LL P WL
Sbjct 48 DQDIPYGVRIAASWAWRLGLILLVVAALIWMLSKISFLIIPVMVAALLAGLLSPVTRWLK 107
Query 67 SRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAH 126
+R +P+ AV + +L ++GG L V Q +AG L +E I + WL +GP H
Sbjct 108 ARRVPNGGAVAITVLGFLGLIGGSLALVGRQLVAGFSELWSEALTGIQQIQGWLADGPLH 167
Query 127 LRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIW 186
L Q+D A AL+NN + + SGALS +T +L LF LIFFL G IW
Sbjct 168 LTAAQMDQYLQEATAALQNNSSSILSGALSFGSTAGHFAAGLILALFVLIFFLLEGDRIW 227
Query 187 QYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLA 246
++ + P R AGR G+AS++ YAR VA DA G+G G A++GVPLALPL
Sbjct 228 AFLVRLLPRKARAATFGAGRKGWASMVSYARIQMFVAFVDAVGIGVGAAIIGVPLALPLG 287
Query 247 SLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRA 306
LVF G+FIP++GA+V G +AV++AL+A G AL+ +G+++ V QLE+H+LQPLVMG+A
Sbjct 288 VLVFIGSFIPIVGALVTGAVAVLLALVANGWVNALVMLGIVLLVQQLESHILQPLVMGKA 347
Query 307 VSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
V++HP+AV+L++AAG LAG+ GAL +VP +A N+A++ +
Sbjct 348 VALHPVAVILSVAAGSYLAGIPGALFSVPILAVANSAIRYI 388
>gi|298527597|ref|ZP_07015006.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497391|gb|EFI32685.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=146
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/146 (99%), Positives = 146/146 (100%), Gaps = 0/146 (0%)
Query 222 VALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL 281
+ALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL
Sbjct 1 MALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL 60
Query 282 ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFN 341
ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFN
Sbjct 61 ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFN 120
Query 342 NAVQVLLGGNPFADVADVSSDHLTEV 367
NAVQVLLGGNPFADVADVSSDHLTEV
Sbjct 121 NAVQVLLGGNPFADVADVSSDHLTEV 146
>gi|315503542|ref|YP_004082429.1| hypothetical protein ML5_2759 [Micromonospora sp. L5]
gi|315410161|gb|ADU08278.1| protein of unknown function UPF0118 [Micromonospora sp. L5]
Length=452
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 160/346 (47%), Positives = 224/346 (65%), Gaps = 0/346 (0%)
Query 2 SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP 61
+ S DD V +R AAW WR +VI ALL ++ ++++P+ +AL+LSALL P
Sbjct 87 TVSRDDTEVPHALRIAAAWCWRLIVIGIVTWALLRIVGTISIVIIPLTVALLLSALLAPA 146
Query 62 VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI 121
V WL LP ++A +VL+ G A + G LT VV++FI G+P L + + + W
Sbjct 147 VGWLLRARLPRSLATAVVLVGGLAAVVGTLTLVVNEFIKGVPELSQKSSEGVRQIQDWFK 206
Query 122 EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG 181
GP HL Q++ + A + N + TSGA+STAAT+ E++T VLVLF FFL
Sbjct 207 TGPLHLSDSQLNRYIDEAQNWINGNTERFTSGAISTAATLAEVLTGTVLVLFATFFFLRD 266
Query 182 GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL 241
G +IW+++ + P + R +V AGRA +A+L Y RAT LVA DA G+G L + +P
Sbjct 267 GNNIWRFLVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIGIFLVLFDIPF 326
Query 242 ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL 301
A PLA+LVF GAFIP++GA ++G +AV+VAL+ G ALI +G +I V Q+E H+LQPL
Sbjct 327 AFPLAALVFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQQVEGHVLQPL 386
Query 302 VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+MGRAV+IHPLAV++ IAAG VLAG+ GAL+AVP +A N AV+ L
Sbjct 387 IMGRAVAIHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRRL 432
>gi|302870180|ref|YP_003838817.1| hypothetical protein Micau_5736 [Micromonospora aurantiaca ATCC
27029]
gi|302573039|gb|ADL49241.1| protein of unknown function UPF0118 [Micromonospora aurantiaca
ATCC 27029]
Length=455
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 160/346 (47%), Positives = 224/346 (65%), Gaps = 0/346 (0%)
Query 2 SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP 61
+ S DD V +R AAW WR +VI ALL ++ ++++P+ +AL+LSALL P
Sbjct 90 TVSRDDTEVPHALRIAAAWCWRLIVIGIVTWALLRIVGTISIVIIPLTVALLLSALLAPA 149
Query 62 VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI 121
V WL LP ++A +VL+ G A + G LT VV++FI G+P L + + + W
Sbjct 150 VGWLLRARLPRSLATAVVLVGGLAAVVGTLTLVVNEFIKGVPELSQKSSEGVRQIQDWFK 209
Query 122 EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG 181
GP HL Q++ + A + N + TSGA+STAAT+ E++T VLVLF FFL
Sbjct 210 TGPLHLSDSQLNRYIDEAQNWINGNTERFTSGAISTAATLAEVLTGTVLVLFATFFFLRD 269
Query 182 GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL 241
G +IW+++ + P + R +V AGRA +A+L Y RAT LVA DA G+G L + +P
Sbjct 270 GNNIWRFLVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIGIFLVLFDIPF 329
Query 242 ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL 301
A PLA+LVF GAFIP++GA ++G +AV+VAL+ G ALI +G +I V Q+E H+LQPL
Sbjct 330 AFPLAALVFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQQVEGHVLQPL 389
Query 302 VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+MGRAV+IHPLAV++ IAAG VLAG+ GAL+AVP +A N AV+ L
Sbjct 390 IMGRAVAIHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRRL 435
>gi|256381030|ref|YP_003104690.1| hypothetical protein Amir_7052 [Actinosynnema mirum DSM 43827]
gi|255925333|gb|ACU40844.1| protein of unknown function UPF0118 [Actinosynnema mirum DSM
43827]
Length=402
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/343 (49%), Positives = 242/343 (71%), Gaps = 0/343 (0%)
Query 6 DDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWL 65
+ + V PL+R +AA +WRF+ ++ A+ + + +++PV +AL+L+ALL P V L
Sbjct 10 ESSKVPPLLRVSAALSWRFVAVVGALYIVSQAVGYMASVMIPVGIALLLAALLSPAVTQL 69
Query 66 DSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPA 125
G+P +A VL+ G AV+GG+LTFV+++F GLP L +V S+ + R WL +GP
Sbjct 70 TRVGVPRGLATGFVLVGGLAVVGGVLTFVITEFSNGLPELQNQVTASLSTIRDWLKDGPL 129
Query 126 HLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSI 185
HL Q+ + +E ++ NQ ++TSGAL+TAAT+ EL+T VL LFTLIFFL+ G I
Sbjct 130 HLSELQLQQYVDQLLETVKANQGEITSGALTTAATVGELLTGLVLALFTLIFFLHDGDGI 189
Query 186 WQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPL 245
W+++T+ P VR R AGR G+ASL+ Y RAT +VA+ DA GVG GL ++GVPL +PL
Sbjct 190 WRFITRIVPRDVRARADLAGRRGFASLVSYVRATAVVAVVDAVGVGIGLWIVGVPLVVPL 249
Query 246 ASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGR 305
A+LVF GAFIP++GAV+ G +AV++AL+A G A + + +LI V QLE+H+LQPL++GR
Sbjct 250 AALVFLGAFIPIVGAVITGVVAVLIALVANGPVAAAVVLAILIGVMQLESHVLQPLLLGR 309
Query 306 AVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLL 348
AV +HPLAVVLAI+ G V+AG+ GALL+VP +A N+ ++ LL
Sbjct 310 AVKLHPLAVVLAISTGLVVAGIAGALLSVPLLAVLNSGIRSLL 352
>gi|257057886|ref|YP_003135718.1| putative permease [Saccharomonospora viridis DSM 43017]
gi|256587758|gb|ACU98891.1| predicted permease [Saccharomonospora viridis DSM 43017]
Length=403
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/333 (50%), Positives = 229/333 (69%), Gaps = 0/333 (0%)
Query 15 RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV 74
R AA +WRFLV++AA+ ++W++ +VVPV +AL+L+ALL P V L +P V
Sbjct 16 RVCAALSWRFLVVVAAIYVVVWLVGYLSFVVVPVAIALLLAALLAPAVQQLVKYRIPQPV 75
Query 75 AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN 134
A +VL+ G ++G +LTFV++QF AGLP L +V S+D WLI GP HLR QI +
Sbjct 76 AAAIVLIGGLGIVGALLTFVITQFTAGLPALQEKVNSSLDRVNDWLINGPLHLRETQIVD 135
Query 135 AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP 194
N A++ L+ NQA + ALSTA + E++T +L L L+FFL G+ IW ++ + P
Sbjct 136 FVNNAVDFLQENQAAIADSALSTAGAVGEILTGLLLTLVVLVFFLAHGQQIWNFLIRGVP 195
Query 195 ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF 254
A VR RV AGR G+ASL+ Y RAT VA+ D G+G GL ++GVPLA+PLA+LVF GAF
Sbjct 196 APVRKRVDLAGRRGFASLVSYVRATAAVAVVDGVGIGIGLWIVGVPLAIPLATLVFLGAF 255
Query 255 IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV 314
IP+IGAVV G +AV+VAL+ G ALI + +++ V QLE ++LQPL++GRAV +HPLAV
Sbjct 256 IPIIGAVVTGAVAVLVALVTNGFVTALIVLAIVVGVMQLEGNVLQPLLLGRAVRLHPLAV 315
Query 315 VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+LAI AG AG+ GALL+VP +A N+ ++ L
Sbjct 316 ILAITAGMTTAGITGALLSVPLLAVLNSGIKSL 348
>gi|331700348|ref|YP_004336587.1| hypothetical protein Psed_6646 [Pseudonocardia dioxanivorans
CB1190]
gi|326955037|gb|AEA28734.1| protein of unknown function UPF0118 [Pseudonocardia dioxanivorans
CB1190]
Length=493
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/333 (52%), Positives = 237/333 (72%), Gaps = 0/333 (0%)
Query 15 RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV 74
R T+ R L+I AA L++V+ + V+VVPV +A++LSALL P V WL +R +P
Sbjct 111 RVTSEVCARVLIIAAAFGLLVFVIIELRVVVVPVAIAVLLSALLAPVVHWLVARRVPRGP 170
Query 75 AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN 134
A LVL+ G A+LGG+L+FV++ FIAG P L ++ S S ++ L P + Q+DN
Sbjct 171 ATFLVLIGGIALLGGLLSFVINTFIAGFPALQAQLTASFQSVQQLLAGPPLRIPTSQLDN 230
Query 135 AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP 194
+A+R+N+ LTSGAL+TAAT+TE+ L LF+LIFFLY G IW+++ +A P
Sbjct 231 LPAQIEQAIRDNRDVLTSGALTTAATVTEIAAGLALTLFSLIFFLYDGPRIWRFLLRAAP 290
Query 195 ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF 254
+ R+RV AGR +ASL+GY RAT LVA+ DA G+G GL +GVPL +PLA+LVF GAF
Sbjct 291 RARRERVDVAGRRAFASLVGYTRATVLVAIVDAVGIGIGLWAVGVPLVVPLAALVFLGAF 350
Query 255 IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV 314
IP +GAVV G +AV++AL+A G+ ALI +G+++AV QLE H+LQPL++GRAVS+HPLAV
Sbjct 351 IPTVGAVVTGAVAVLIALVANGLIPALIILGVVVAVQQLEGHVLQPLLLGRAVSLHPLAV 410
Query 315 VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
VL++AAG V++G+ GALLAVP +A AV+ L
Sbjct 411 VLSVAAGVVISGIAGALLAVPLLAVITAAVRSL 443
>gi|302531313|ref|ZP_07283655.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4]
gi|302440208|gb|EFL12024.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4]
Length=406
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 162/308 (53%), Positives = 226/308 (74%), Gaps = 0/308 (0%)
Query 14 VRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA 73
+R +AA +WRF+V++AA+ A++W+L +VVPV +AL+LSALL P V L P
Sbjct 29 LRVSAALSWRFIVVIAALYAVVWLLGYLASVVVPVSIALLLSALLAPAVSRLVQIRFPRG 88
Query 74 VAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQID 133
+A +VL++G AVLGG+LTFV++QF +GLP L ++ S++ + WLI GP HLR EQI
Sbjct 89 LATAIVLVAGLAVLGGLLTFVITQFSSGLPELQQQLTTSLNQIKDWLINGPLHLRQEQIQ 148
Query 134 NAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAF 193
+ N AI L+NNQA LT+ AL+TA T+ E++T VL LF IFFL GG IW ++ +
Sbjct 149 DFINQAIGFLQNNQASLTTTALTTAGTVGEILTGFVLTLFVTIFFLAGGDGIWTFLVRGV 208
Query 194 PASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGA 253
P VR+RV AGR G+ASL+ Y RAT VA+ DA G+G GL ++GVPL +PLA+LVF GA
Sbjct 209 PQRVRNRVNVAGRRGFASLVSYIRATAAVAVVDAVGIGIGLWIVGVPLVIPLATLVFLGA 268
Query 254 FIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLA 313
FIP+IGA++ G +AV++AL++KGI A++ + +++ V QLE+H+LQPL++GRAV +HPLA
Sbjct 269 FIPIIGALITGGVAVLIALVSKGIIGAVVVLAIVVGVMQLESHVLQPLLLGRAVRLHPLA 328
Query 314 VVLAIAAG 321
VVLAIA G
Sbjct 329 VVLAIAIG 336
>gi|300787453|ref|YP_003767744.1| hypothetical protein AMED_5588 [Amycolatopsis mediterranei U32]
gi|299796967|gb|ADJ47342.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340528972|gb|AEK44177.1| hypothetical protein RAM_28500 [Amycolatopsis mediterranei S699]
Length=389
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/333 (48%), Positives = 224/333 (68%), Gaps = 0/333 (0%)
Query 15 RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV 74
R AA AWR L++ A+ + +V K ++VPV +AL+L+ L P V WL + +P +
Sbjct 26 RVAAAVAWRSLIVAGALTVVGFVAVKLASVLVPVAVALLLAGLFSPAVSWLAGKKVPRGL 85
Query 75 AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN 134
A +VL+ G V GG++TFVV G+P L+ +V S+ WL GP HL Q+D
Sbjct 86 AAAIVLVGGIGVAGGVVTFVVISVTVGMPALIDQVTASLTDLHTWLRTGPLHLSQVQLDE 145
Query 135 AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP 194
L N++ + SGAL+TA T+ EL+ A+L +F LIFFL GR IW +V +A P
Sbjct 146 MLGNLTATLGRNKSAIASGALTTAVTVGELLAEALLAVFCLIFFLAQGRVIWVFVLRAVP 205
Query 195 ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF 254
A +R+RV AGR+G+ +L Y R T VAL DAAG+ GL ++GVPLA PL++LVF GAF
Sbjct 206 AGLRNRVDVAGRSGFTTLAHYIRGTAAVALVDAAGISLGLVIIGVPLAAPLSALVFLGAF 265
Query 255 IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV 314
+P+IG+V+AG +AV+VAL+A G+ A+I + +++ V QLE+H+LQPL++GRAV +HPLAV
Sbjct 266 VPVIGSVIAGAIAVLVALVANGVWAAVIVLAVVVGVMQLESHVLQPLLLGRAVRLHPLAV 325
Query 315 VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
VLA+ G V AG+VGALLAVP +A F++ V+ L
Sbjct 326 VLALTIGLVTAGIVGALLAVPLLAVFSSGVRSL 358
>gi|288919568|ref|ZP_06413898.1| protein of unknown function UPF0118 [Frankia sp. EUN1f]
gi|288349074|gb|EFC83321.1| protein of unknown function UPF0118 [Frankia sp. EUN1f]
Length=401
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/328 (44%), Positives = 201/328 (62%), Gaps = 0/328 (0%)
Query 15 RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV 74
R A W+WR +VI A+ L ++ + +V+PV+ L+++AL+ P GLP
Sbjct 57 RVAAGWSWRLIVIGTAVYILSMMVGRVRTVVIPVIAGLLIAALIHPLAQRFQRLGLPRLG 116
Query 75 AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN 134
A L+ F ++ G V +P + +V ID R +L +GP HL QID+
Sbjct 117 AAFAALIVFFLIVTGAGVAVGFNAANEIPAVADQVSEGIDQVRDYLTDGPFHLSEGQIDD 176
Query 135 AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP 194
+ +++ +N+ KL SG LSTA+ E++T+ ++ LF+ FFLY G IW ++ FP
Sbjct 177 LVDDIRKSITDNRGKLVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWDWIVTRFP 236
Query 195 ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF 254
A DRVR AGR + ++ GY R T VA DA G+ GL +G PL PLA L FFG F
Sbjct 237 AGAEDRVRGAGREAWNTITGYIRGTVFVAAVDAIGITIGLLAVGAPLVAPLALLTFFGGF 296
Query 255 IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV 314
IP+IGA VAG AV+V L++ G+G ALI +G++IAV QLE HLLQPL+M RAV +HPLA+
Sbjct 297 IPIIGATVAGIAAVLVVLVSNGLGDALIILGVVIAVQQLEGHLLQPLIMRRAVRLHPLAI 356
Query 315 VLAIAAGGVLAGVVGALLAVPTVAFFNN 342
V+A++AG VLAG+ GA+ AVP VA N
Sbjct 357 VIALSAGSVLAGIPGAIAAVPFVAVVNK 384
>gi|158317061|ref|YP_001509569.1| hypothetical protein Franean1_5305 [Frankia sp. EAN1pec]
gi|158112466|gb|ABW14663.1| protein of unknown function UPF0118 [Frankia sp. EAN1pec]
Length=464
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/344 (42%), Positives = 205/344 (60%), Gaps = 0/344 (0%)
Query 15 RKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAV 74
R +AW+WR L+I A+ L ++ + ++V+PV+ L+++AL+ P G+P
Sbjct 120 RVASAWSWRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIAALIHPIAHRFQRMGVPRLG 179
Query 75 AVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDN 134
A LL ++ G V +P + +V +D R +L +GP HL QIDN
Sbjct 180 AAFAALLIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYLTDGPFHLSQGQIDN 239
Query 135 AGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFP 194
+ ++ +N+ ++ SG LSTA+ E++T+ ++ LF+ FFLY G IW ++ FP
Sbjct 240 LVDDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIVTRFP 299
Query 195 ASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAF 254
+ DRVR AGR + +L GY R T VA DA G+ GL +G PL PLA L FFG F
Sbjct 300 SGAEDRVRGAGREAWLTLTGYIRGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTFFGGF 359
Query 255 IPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAV 314
IP++GA VAG AV+VAL++ G+ ALI +G++IAV Q+E HLLQPLVM RAV +HPLA+
Sbjct 360 IPIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEGHLLQPLVMRRAVRLHPLAI 419
Query 315 VLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVAD 358
V+A++AGGVLAG+ GA+ AVP VA N L AD
Sbjct 420 VIALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQPAD 463
>gi|330469076|ref|YP_004406819.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032]
gi|328812047|gb|AEB46219.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032]
Length=416
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/346 (46%), Positives = 219/346 (64%), Gaps = 0/346 (0%)
Query 2 SASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPP 61
+ S DD+ V +R AAW+WR +VI ALL + +++VP+L+AL+L+ALL P
Sbjct 49 TTSRDDSDVPKALRIAAAWSWRLIVIGVVGWALLRFMGAIRIVIVPLLVALLLTALLAPA 108
Query 62 VDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLI 121
V WL +P ++A +VL+SG + G LT VV+QFI GLP L I + WL
Sbjct 109 VGWLLRLRVPRSLATAVVLISGLGAVVGTLTLVVNQFIVGLPDLSVRAAAGIGQIQDWLR 168
Query 122 EGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYG 181
+GP L Q++ A + + N LTSGA++TA T+ E+ T +LVLF + FFL
Sbjct 169 DGPLGLSDGQLNGYVEAGQKWINENSQSLTSGAINTAGTVVEVFTGTLLVLFAMFFFLRD 228
Query 182 GRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPL 241
G IW+++ P + R R AGRA + +L+ Y RAT LVA DA G+G L + VP
Sbjct 229 GDRIWRFLVGMLPVAARWRTDDAGRASWLTLVAYVRATVLVAFIDALGIGIALVLFDVPF 288
Query 242 ALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPL 301
A PLA+LVF GAFIP++GA ++G +AV+VAL+ G AL +G +I V Q+E ++LQP
Sbjct 289 AFPLAALVFLGAFIPIVGATLSGAVAVLVALVDSGWVTALAILGAVIVVQQVEGNVLQPW 348
Query 302 VMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVL 347
+MGRAV++HPL VVLA+ AG VL G+VGAL+AVP +A N AV+ L
Sbjct 349 IMGRAVALHPLPVVLAVTAGVVLDGIVGALVAVPLIAVLNTAVRRL 394
Lambda K H
0.326 0.139 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 694383994300
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40