BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0210
Length=492
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607351|ref|NP_214724.1| hypothetical protein Rv0210 [Mycoba... 944 0.0
gi|31791388|ref|NP_853881.1| hypothetical protein Mb0216 [Mycoba... 942 0.0
gi|323717199|gb|EGB26408.1| hypothetical protein TMMG_00639 [Myc... 941 0.0
gi|340625247|ref|YP_004743699.1| hypothetical protein MCAN_02161... 941 0.0
gi|326905965|gb|EGE52898.1| hypothetical protein TBPG_03937 [Myc... 927 0.0
gi|297632690|ref|ZP_06950470.1| hypothetical protein MtubK4_0112... 924 0.0
gi|15839590|ref|NP_334627.1| hypothetical protein MT0220 [Mycoba... 922 0.0
gi|294994683|ref|ZP_06800374.1| hypothetical protein Mtub2_09272... 807 0.0
gi|289445742|ref|ZP_06435486.1| conserved hypothetical protein [... 733 0.0
gi|240168416|ref|ZP_04747075.1| hypothetical protein MkanA1_0383... 537 2e-150
gi|183980481|ref|YP_001848772.1| hypothetical protein MMAR_0450 ... 514 1e-143
gi|118462448|ref|YP_884085.1| hypothetical protein MAV_4964 [Myc... 511 8e-143
gi|41409743|ref|NP_962579.1| hypothetical protein MAP3645 [Mycob... 510 2e-142
gi|254818289|ref|ZP_05223290.1| hypothetical protein MintA_00095... 501 1e-139
gi|118616828|ref|YP_905160.1| hypothetical protein MUL_1100 [Myc... 501 1e-139
gi|296167433|ref|ZP_06849832.1| conserved hypothetical protein [... 497 2e-138
gi|342859334|ref|ZP_08715988.1| hypothetical protein MCOL_10658 ... 493 3e-137
gi|118470371|ref|YP_884669.1| hypothetical protein MSMEG_0254 [M... 421 2e-115
gi|333988813|ref|YP_004521427.1| hypothetical protein JDM601_017... 419 7e-115
gi|169631578|ref|YP_001705227.1| hypothetical protein MAB_4504c ... 354 2e-95
gi|126432777|ref|YP_001068468.1| hypothetical protein Mjls_0164 ... 350 3e-94
gi|108797155|ref|YP_637352.1| hypothetical protein Mmcs_0175 [My... 347 2e-93
gi|120401227|ref|YP_951056.1| hypothetical protein Mvan_0200 [My... 256 6e-66
gi|315441973|ref|YP_004074852.1| hypothetical protein Mspyr1_030... 211 3e-52
gi|145221056|ref|YP_001131734.1| hypothetical protein Mflv_0452 ... 204 4e-50
gi|111022145|ref|YP_705117.1| hypothetical protein RHA1_ro05178 ... 105 2e-20
gi|226364638|ref|YP_002782420.1| hypothetical protein ROP_52280 ... 101 4e-19
gi|294994684|ref|ZP_06800375.1| hypothetical protein Mtub2_09277... 101 4e-19
gi|256380982|ref|YP_003104642.1| HSR1-like GTP-binding protein [... 91.3 4e-16
gi|302531258|ref|ZP_07283600.1| dynamin [Streptomyces sp. AA4] >... 90.9 5e-16
gi|134103690|ref|YP_001109351.1| dynamin [Saccharopolyspora eryt... 87.8 4e-15
gi|340532753|gb|AEK47958.1| dynamin [Amycolatopsis mediterranei ... 82.8 1e-13
gi|300791054|ref|YP_003771345.1| dynamin [Amycolatopsis mediterr... 82.8 1e-13
gi|257057847|ref|YP_003135679.1| GTPase [Saccharomonospora virid... 80.1 8e-13
gi|325677141|ref|ZP_08156809.1| hypothetical protein HMPREF0724_... 75.5 2e-11
gi|312141442|ref|YP_004008778.1| hypothetical protein REQ_41300 ... 73.9 6e-11
gi|333921786|ref|YP_004495367.1| hypothetical protein AS9A_4133 ... 69.3 1e-09
gi|226304577|ref|YP_002764535.1| hypothetical protein RER_10880 ... 64.7 3e-08
gi|291301201|ref|YP_003512479.1| hypothetical protein Snas_3729 ... 59.7 1e-06
gi|229494603|ref|ZP_04388366.1| conserved hypothetical protein [... 57.8 4e-06
gi|296395209|ref|YP_003660093.1| hypothetical protein Srot_2831 ... 51.2 4e-04
gi|262204295|ref|YP_003275503.1| hypothetical protein Gbro_4477 ... 50.8 5e-04
gi|343924440|ref|ZP_08763989.1| hypothetical protein GOALK_016_0... 48.9 0.002
gi|317509185|ref|ZP_07966809.1| hypothetical protein HMPREF9336_... 47.0 0.007
gi|312199524|ref|YP_004019585.1| GTP-binding protein HSR1-relate... 47.0 0.007
gi|54027454|ref|YP_121696.1| hypothetical protein nfa54800 [Noca... 45.8 0.018
gi|343925669|ref|ZP_08765186.1| hypothetical protein GOALK_048_0... 45.4 0.020
gi|262201142|ref|YP_003272350.1| hypothetical protein Gbro_1149 ... 42.0 0.22
gi|226364948|ref|YP_002782730.1| hypothetical protein ROP_55380 ... 40.0 0.84
gi|213965045|ref|ZP_03393244.1| hypothetical protein CORAM0001_0... 39.3 1.6
>gi|15607351|ref|NP_214724.1| hypothetical protein Rv0210 [Mycobacterium tuberculosis H37Rv]
gi|148659974|ref|YP_001281497.1| hypothetical protein MRA_0218 [Mycobacterium tuberculosis H37Ra]
gi|148821403|ref|YP_001286157.1| hypothetical protein TBFG_10212 [Mycobacterium tuberculosis F11]
43 more sequence titles
Length=492
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/492 (99%), Positives = 492/492 (100%), Gaps = 0/492 (0%)
Query 1 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
+IRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ
Sbjct 1 MIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
Query 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR
Sbjct 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
Query 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA
Sbjct 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
Query 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK
Sbjct 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL
Sbjct 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG
Sbjct 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
Query 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 420
LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE
Sbjct 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 420
Query 421 TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE 480
TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE
Sbjct 421 TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE 480
Query 481 LGEPGAPTTGLF 492
LGEPGAPTTGLF
Sbjct 481 LGEPGAPTTGLF 492
>gi|31791388|ref|NP_853881.1| hypothetical protein Mb0216 [Mycobacterium bovis AF2122/97]
gi|121636122|ref|YP_976345.1| hypothetical protein BCG_0247 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988595|ref|YP_002643282.1| hypothetical protein JTY_0216 [Mycobacterium bovis BCG str. Tokyo
172]
24 more sequence titles
Length=492
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/492 (99%), Positives = 491/492 (99%), Gaps = 0/492 (0%)
Query 1 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
+IRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ
Sbjct 1 MIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
Query 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR
Sbjct 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
Query 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA
Sbjct 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
Query 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK
Sbjct 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL
Sbjct 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG
Sbjct 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
Query 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 420
LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE
Sbjct 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 420
Query 421 TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE 480
TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE
Sbjct 421 TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE 480
Query 481 LGEPGAPTTGLF 492
LGEPG PTTGLF
Sbjct 481 LGEPGTPTTGLF 492
>gi|323717199|gb|EGB26408.1| hypothetical protein TMMG_00639 [Mycobacterium tuberculosis CDC1551A]
Length=520
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/492 (99%), Positives = 491/492 (99%), Gaps = 0/492 (0%)
Query 1 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ
Sbjct 29 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 88
Query 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR
Sbjct 89 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 148
Query 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA
Sbjct 149 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 208
Query 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK
Sbjct 209 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 268
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL
Sbjct 269 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 328
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG
Sbjct 329 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 388
Query 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 420
LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE
Sbjct 389 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 448
Query 421 TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE 480
TLLSTAISERDDAENARVADQVSIIDGEL EHAVAAARAAALRDREMPAVRAALEAVRAE
Sbjct 449 TLLSTAISERDDAENARVADQVSIIDGELLEHAVAAARAAALRDREMPAVRAALEAVRAE 508
Query 481 LGEPGAPTTGLF 492
LGEPGAPTTGLF
Sbjct 509 LGEPGAPTTGLF 520
>gi|340625247|ref|YP_004743699.1| hypothetical protein MCAN_02161 [Mycobacterium canettii CIPT
140010059]
gi|340003437|emb|CCC42557.1| hypothetical protein MCAN_02161 [Mycobacterium canettii CIPT
140010059]
Length=492
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/492 (99%), Positives = 490/492 (99%), Gaps = 0/492 (0%)
Query 1 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
+IRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ
Sbjct 1 MIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
Query 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR
Sbjct 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
Query 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA
Sbjct 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
Query 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK
Sbjct 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL
Sbjct 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
LGVPVQPPVLENLPAVLPTV APPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG
Sbjct 301 LGVPVQPPVLENLPAVLPTVAAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
Query 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 420
LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE
Sbjct 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVE 420
Query 421 TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE 480
TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE
Sbjct 421 TLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAE 480
Query 481 LGEPGAPTTGLF 492
LGEPG PTTGLF
Sbjct 481 LGEPGTPTTGLF 492
>gi|326905965|gb|EGE52898.1| hypothetical protein TBPG_03937 [Mycobacterium tuberculosis W-148]
Length=487
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/483 (99%), Positives = 482/483 (99%), Gaps = 0/483 (0%)
Query 10 AGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAEL 69
AGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAEL
Sbjct 5 AGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAEL 64
Query 70 GPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDR 129
GPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDR
Sbjct 65 GPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDR 124
Query 130 LAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVA 189
LAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVA
Sbjct 125 LAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVA 184
Query 190 RRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRC 249
RRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRC
Sbjct 185 RRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRC 244
Query 250 SLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPV 309
SLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPV
Sbjct 245 SLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPV 304
Query 310 LENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAG 369
LENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAG
Sbjct 305 LENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAG 364
Query 370 VAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISE 429
VAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISE
Sbjct 365 VAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISE 424
Query 430 RDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTT 489
RDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPG PTT
Sbjct 425 RDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGTPTT 484
Query 490 GLF 492
GLF
Sbjct 485 GLF 487
>gi|297632690|ref|ZP_06950470.1| hypothetical protein MtubK4_01126 [Mycobacterium tuberculosis
KZN 4207]
Length=481
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/481 (99%), Positives = 481/481 (100%), Gaps = 0/481 (0%)
Query 12 VDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP 71
+DELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP
Sbjct 1 MDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP 60
Query 72 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 131
GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA
Sbjct 61 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 120
Query 132 ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR 191
ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR
Sbjct 121 ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR 180
Query 192 FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL 251
FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL
Sbjct 181 FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL 240
Query 252 LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE 311
LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE
Sbjct 241 LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE 300
Query 312 NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVA 371
NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVA
Sbjct 301 NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVA 360
Query 372 IGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERD 431
IGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERD
Sbjct 361 IGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERD 420
Query 432 DAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGL 491
DAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGL
Sbjct 421 DAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGL 480
Query 492 F 492
F
Sbjct 481 F 481
>gi|15839590|ref|NP_334627.1| hypothetical protein MT0220 [Mycobacterium tuberculosis CDC1551]
gi|13879705|gb|AAK44441.1| hypothetical protein MT0220 [Mycobacterium tuberculosis CDC1551]
Length=481
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/481 (99%), Positives = 480/481 (99%), Gaps = 0/481 (0%)
Query 12 VDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP 71
+DELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP
Sbjct 1 MDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP 60
Query 72 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 131
GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA
Sbjct 61 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 120
Query 132 ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR 191
ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR
Sbjct 121 ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR 180
Query 192 FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL 251
FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL
Sbjct 181 FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL 240
Query 252 LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE 311
LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE
Sbjct 241 LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE 300
Query 312 NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVA 371
NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVA
Sbjct 301 NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVA 360
Query 372 IGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERD 431
IGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERD
Sbjct 361 IGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERD 420
Query 432 DAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGL 491
DAENARVADQVSIIDGEL EHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGL
Sbjct 421 DAENARVADQVSIIDGELLEHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGL 480
Query 492 F 492
F
Sbjct 481 F 481
>gi|294994683|ref|ZP_06800374.1| hypothetical protein Mtub2_09272 [Mycobacterium tuberculosis
210]
Length=419
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/419 (99%), Positives = 419/419 (100%), Gaps = 0/419 (0%)
Query 1 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
+IRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ
Sbjct 1 MIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
Query 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR
Sbjct 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
Query 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA
Sbjct 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
Query 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK
Sbjct 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL
Sbjct 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG
Sbjct 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
Query 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAV 419
LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAV
Sbjct 361 LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAV 419
>gi|289445742|ref|ZP_06435486.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289418700|gb|EFD15901.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=380
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/379 (99%), Positives = 379/379 (100%), Gaps = 0/379 (0%)
Query 1 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
+IRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ
Sbjct 1 MIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
Query 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR
Sbjct 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
Query 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA
Sbjct 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
Query 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK
Sbjct 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL
Sbjct 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPG 360
LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSR+VAGLTPG
Sbjct 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRMVAGLTPG 360
Query 361 LAASGMVAGVAIGLAVTAW 379
LAASGMVAGVAIGLAVTAW
Sbjct 361 LAASGMVAGVAIGLAVTAW 379
>gi|240168416|ref|ZP_04747075.1| hypothetical protein MkanA1_03837 [Mycobacterium kansasii ATCC
12478]
Length=524
Score = 537 bits (1383), Expect = 2e-150, Method: Compositional matrix adjust.
Identities = 312/495 (64%), Positives = 372/495 (76%), Gaps = 10/495 (2%)
Query 1 VIRAASDDPAG-VDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLP 59
+I AA +DPA VD LVAAI P + L VI RR+VVLVTGPWLAGVS V AAL +R P
Sbjct 1 MIGAAREDPAARVDALVAAIGPKVGPL---VIRRRDVVLVTGPWLAGVSSVVAALRQRAP 57
Query 60 QRRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGW 119
+ FVE + L PGDAP AVVFVVSAA LTESDC LLD AAEHTD V+ V SK+DVHR W
Sbjct 58 RHEFVEPSALAPGDAPTAVVFVVSAAAPLTESDCALLDAAAEHTDVVIGVASKVDVHRSW 117
Query 120 RDVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLR 179
R+VL ++R LAA A RYA VPWVGAAAAP+LG +DDLVAA+ QLADP +ARRN LR
Sbjct 118 REVLATDRATLAAHAPRYADVPWVGAAAAPQLGPSRMDDLVAALLSQLADPDIARRNRLR 177
Query 180 AWESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARV 239
AWESRL +A+RF DA+ GR+ARVDALR +R LR RQS+++H IALR Q+Q ARV
Sbjct 178 AWESRLQTLAQRFRRDAEGTGRKARVDALRAERSAALRHRRQSRTDHAIALRGQVQQARV 237
Query 240 KLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQ 299
+LSY ARNRCS LRVELQE VA L R+ IA F TR RV +AEV E LADV
Sbjct 238 QLSYLARNRCSSLRVELQEDVAVLPRRKIAEFENDTRSRVARALAEVSEAVHRRLADVTH 297
Query 300 LLGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAG--- 356
L VPV+ ++ P V V APPL SRRLE RL +LGAGFGLG+A+TLSRL+AG
Sbjct 298 ALSVPVELAPVDMPPTV--AVSAPPLKSRRLESRLMVVLGAGFGLGVAMTLSRLLAGLAP 355
Query 357 -LTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATR 415
L P L +G+V VA+GL +T WVV+ RALL DR V+DRWTG+V ++LRSV+++LV+ R
Sbjct 356 RLNPWLTGAGIVGCVALGLVLTLWVVHTRALLSDRAVLDRWTGDVISALRSVLDELVSGR 415
Query 416 VVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALE 475
V+A E+ LSTA+S RD+AE+ARVA QVS+ID ELREH +AAARAAA+RDRE+PA++AAL+
Sbjct 416 VLAAESQLSTALSARDEAEHARVAHQVSMIDAELREHTIAAARAAAVRDRELPAIQAALD 475
Query 476 AVRAELGEPGAPTTG 490
AVR ELGEPG PT G
Sbjct 476 AVRKELGEPGIPTVG 490
>gi|183980481|ref|YP_001848772.1| hypothetical protein MMAR_0450 [Mycobacterium marinum M]
gi|183173807|gb|ACC38917.1| conserved secreted protein [Mycobacterium marinum M]
Length=517
Score = 514 bits (1324), Expect = 1e-143, Method: Compositional matrix adjust.
Identities = 293/478 (62%), Positives = 355/478 (75%), Gaps = 9/478 (1%)
Query 12 VDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP 71
VDELV AI P L G P INRR+VVLVTGPWLAG S V AL RLPQ RFVE+ LG
Sbjct 13 VDELVLAIGPKL---GAPSINRRDVVLVTGPWLAGTSSVITALRRRLPQHRFVESPWLGA 69
Query 72 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 131
G P AVVFVVSAAT +TESDC LLD AA HTD V+A V+KID+HR WR+VL +NR +LA
Sbjct 70 GAVPTAVVFVVSAATPMTESDCALLDAAAGHTDVVIAAVTKIDLHRTWREVLAANRAKLA 129
Query 132 ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR 191
A A RY VPWVG AAAP+LG P +DDLVA ++ +LA P +ARRN LRAW++ LL+ +R
Sbjct 130 AHAPRYGAVPWVGVAAAPQLGPPGVDDLVATVRTELAAPDIARRNRLRAWQAGLLLAGQR 189
Query 192 FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL 251
F+ DA AGRRARVD LR++R +VL++ RQ ++ TIALR QIQ ARV+L YFAR+RC+
Sbjct 190 FNRDAAGAGRRARVDGLREERGSVLQRRRQDRTGRTIALRGQIQQARVQLCYFARSRCAS 249
Query 252 LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE 311
+R ELQE +AGL+R+ +A F +Y RGR+ E+V EVG+G A L V++ + +PV P +
Sbjct 250 VRTELQEDIAGLARRRLADFQSYARGRIDEIVTEVGDGITAQLVGVSREMSLPVDFPPAD 309
Query 312 NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTP----GLAASGMV 367
LPAV + APPL SRRLE RL +LG GFGLG+ALTLSRL+AGL P GL +G++
Sbjct 310 PLPAV--AMPAPPLASRRLETRLMMVLGVGFGLGVALTLSRLLAGLAPGLDLGLTLAGIL 367
Query 368 AGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAI 427
V +GLAV WVV RALL DR V++RWT +V SL +EQLVA+RV+A ETLL+TA+
Sbjct 368 GCVVVGLAVALWVVRTRALLADRAVLERWTADVLLSLGCTLEQLVASRVLAAETLLATAL 427
Query 428 SERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPG 485
D+A NAR A QVS ID ELREHA AAARAAA RDREMP +RAALEAV AELGE G
Sbjct 428 WGSDEAANARAAAQVSAIDSELREHARAAARAAARRDREMPTIRAALEAVCAELGESG 485
>gi|118462448|ref|YP_884085.1| hypothetical protein MAV_4964 [Mycobacterium avium 104]
gi|254777403|ref|ZP_05218919.1| hypothetical protein MaviaA2_22431 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118163735|gb|ABK64632.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=511
Score = 511 bits (1317), Expect = 8e-143, Method: Compositional matrix adjust.
Identities = 297/465 (64%), Positives = 352/465 (76%), Gaps = 6/465 (1%)
Query 25 GLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSA 84
GL P ++R + VLVTGPW+AGV+ V AAL ERLPQ +FVE+ +LGPG+ P AVVFVVSA
Sbjct 20 GLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSA 79
Query 85 ATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVG 144
A LT SDC LLD A EHTDAVV VVSKIDVHRGWR+VL +NRD LAA A RYARVPWVG
Sbjct 80 AAHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVG 139
Query 145 AAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRAR 204
AAA P++GEP +DDL + QL D +ARRN LRAWESRL VARRFD + ++ GRRAR
Sbjct 140 AAALPDVGEPDVDDLAKTVAAQLDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRAR 199
Query 205 VDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLS 264
V+ALR++R T L+Q RQ+K+E +I LR QIQ ARV LS+ ARNRC+ +R ELQEH AGLS
Sbjct 200 VEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSARNRCASVRTELQEHAAGLS 259
Query 265 RKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPP 324
R ++ F A+TR R+ EVVAEV +G LAD AQ +GV V P LE LPAV V PP
Sbjct 260 RGKLSGFEAHTRDRLAEVVAEVSDGTDTQLADTAQAVGVAVDLPALEQLPAV--EVSPPP 317
Query 325 LTSRRLEIRLTTLLGAGFGLGIALTLSRLVAG----LTPGLAASGMVAGVAIGLAVTAWV 380
L SRR E L LLG GFGLG+ALTLSRL++G L+P LA + V V I +A+T V
Sbjct 318 LKSRRQETWLMILLGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLV 377
Query 381 VNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVAD 440
+N R LL DR ++DRW G+ TASLRSVVE+LVATRV+ E++LS A+ +D+AENA V+
Sbjct 378 INIRGLLRDRALLDRWAGDATASLRSVVEELVATRVLVAESVLSKALLAQDEAENAAVSA 437
Query 441 QVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPG 485
VS ID ELREHA+AAARAAA RDREMPAV AALEAVRAELGEPG
Sbjct 438 SVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGEPG 482
>gi|41409743|ref|NP_962579.1| hypothetical protein MAP3645 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398575|gb|AAS06195.1| hypothetical protein MAP_3645 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460049|gb|EGO38958.1| hypothetical protein MAPs_44310 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=511
Score = 510 bits (1314), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 296/465 (64%), Positives = 351/465 (76%), Gaps = 6/465 (1%)
Query 25 GLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSA 84
GL P ++R + VLVTGPW+AGV+ V AAL ERLPQ +FVE+ +LGPG+ P AVVFVVSA
Sbjct 20 GLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSA 79
Query 85 ATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVG 144
A LT SDC LLD A EHTDAVV VVSKIDVHRGWR+VL +NRD LAA A RYARVPWVG
Sbjct 80 AAHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVG 139
Query 145 AAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRAR 204
AAA P++GEP +DDL + QL D +ARRN LRAWESRL VARRFD + ++ GRRAR
Sbjct 140 AAALPDVGEPDVDDLAKTVAAQLDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRAR 199
Query 205 VDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLS 264
V+ALR++R T L+Q RQ+K+E +I LR QIQ ARV LS+ ARNRC+ +R ELQEH AGLS
Sbjct 200 VEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSARNRCASVRTELQEHAAGLS 259
Query 265 RKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPP 324
R ++ F A+TR R+ EVVAEV +G LAD AQ +GV V P LE LPAV V PP
Sbjct 260 RGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAVDLPALEQLPAV--EVSPPP 317
Query 325 LTSRRLEIRLTTLLGAGFGLGIALTLSRLVAG----LTPGLAASGMVAGVAIGLAVTAWV 380
L SRR E L L G GFGLG+ALTLSRL++G L+P LA + V V I +A+T V
Sbjct 318 LKSRRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLV 377
Query 381 VNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVAD 440
+N R LL DR ++DRW G+ TASLRSVVE+LVATRV+ E++LS A+ +D+AENA V+
Sbjct 378 INIRGLLRDRALLDRWAGDATASLRSVVEELVATRVLVAESVLSKALLAQDEAENAAVSA 437
Query 441 QVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPG 485
VS ID ELREHA+AAARAAA RDREMPAV AALEAVRAELGEPG
Sbjct 438 SVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGEPG 482
>gi|254818289|ref|ZP_05223290.1| hypothetical protein MintA_00095 [Mycobacterium intracellulare
ATCC 13950]
Length=562
Score = 501 bits (1290), Expect = 1e-139, Method: Compositional matrix adjust.
Identities = 304/489 (63%), Positives = 367/489 (76%), Gaps = 9/489 (1%)
Query 1 VIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQ 60
++ + D A VD LVAA+AP L P ++R +VVLVTGPW+AGVS V AL RLPQ
Sbjct 43 ILVSGGDPIAQVDALVAAVAPDL---DPPAVHRCDVVLVTGPWMAGVSAVATALQGRLPQ 99
Query 61 RRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWR 120
+FVE+ +LGPG+ P+AVVFVVSAA LT SDC LLD A EHTDAVV VVSKIDVHRGWR
Sbjct 100 HKFVESTDLGPGEVPMAVVFVVSAAAHLTASDCALLDAATEHTDAVVGVVSKIDVHRGWR 159
Query 121 DVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRA 180
+V+ +NR+ LAA + RY R PWVGAAA P+ GEP +D LVAA+ QL DP +ARRN LRA
Sbjct 160 EVVDANREALAAHSPRYGRAPWVGAAALPDAGEPDVDALVAAVSAQLDDPDLARRNRLRA 219
Query 181 WESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
WESRL V RRFD D + +GRRARV+ALR++R T L++ RQ+KSE TI LR QIQ ARV+
Sbjct 220 WESRLQTVKRRFDRDVEGSGRRARVEALREERSTALQRRRQAKSERTITLRGQIQQARVQ 279
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
LS+ ARN+C+ R ELQEH AGLSR+D++ F A+TR R+ EVVAEV +G L+DVAQ
Sbjct 280 LSHSARNQCATARTELQEHAAGLSRRDMSGFEAHTRARLDEVVAEVSDGTDTQLSDVAQA 339
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAG---- 356
+GVPV P LE +P V V APPL SRR E L +LG GFGLG+ALTLSRL++G
Sbjct 340 VGVPVDLPALEKMPEV--DVSAPPLKSRRQETWLMIVLGVGFGLGVALTLSRLMSGVVSR 397
Query 357 LTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRV 416
L P LA V VAI +A+T V+N RALLHDR ++DRW G+ TASLRSVVE+LVATRV
Sbjct 398 LNPALAVVAAVVCVAISVALTFLVINIRALLHDRALLDRWAGDATASLRSVVEELVATRV 457
Query 417 VAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEA 476
+ E++LS A+ D+AENA+ + V +ID ELREHA+AAARAAA RDREMPAV AAL A
Sbjct 458 LVAESVLSKALLAHDEAENAQASAAVGVIDTELREHALAAARAAAARDREMPAVAAALRA 517
Query 477 VRAELGEPG 485
VRAELGEPG
Sbjct 518 VRAELGEPG 526
>gi|118616828|ref|YP_905160.1| hypothetical protein MUL_1100 [Mycobacterium ulcerans Agy99]
gi|118568938|gb|ABL03689.1| conserved secreted protein [Mycobacterium ulcerans Agy99]
Length=550
Score = 501 bits (1289), Expect = 1e-139, Method: Compositional matrix adjust.
Identities = 292/481 (61%), Positives = 356/481 (75%), Gaps = 9/481 (1%)
Query 12 VDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP 71
VDELV AI P L G P INRR+VVLVTGPWLAG S V AL RLPQ RFVE+ LG
Sbjct 46 VDELVLAIGPKL---GAPSINRRDVVLVTGPWLAGTSSVITALRRRLPQHRFVESPRLGA 102
Query 72 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 131
G P VVFVVSAAT +TESDC LLD AA HTD V+A V+KID+HR WR+VL +NR +LA
Sbjct 103 GAVPTVVVFVVSAATPMTESDCALLDAAAGHTDVVIAAVTKIDLHRTWREVLAANRAKLA 162
Query 132 ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR 191
A A RY VPWVG AAAP+LG P +DDLVA ++ +LA P +ARRN LRAW + LL+ +R
Sbjct 163 AHAPRYGAVPWVGVAAAPQLGPPGVDDLVATVRTELAAPDIARRNRLRAWHAGLLLAGQR 222
Query 192 FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL 251
F+ DA AGRRARVD LR++R +VL++ RQ ++ TIALR QIQ ARV+L YFAR+RC+
Sbjct 223 FNRDAAGAGRRARVDGLREERGSVLQRRRQDRTGRTIALRGQIQQARVQLCYFARSRCAS 282
Query 252 LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLE 311
+R ELQE +AGL+R+ +A F +Y RGR+ E+V EVG+G A L +V++ + +PV P +
Sbjct 283 VRTELQEDIAGLARQRLADFQSYARGRIDEIVTEVGDGITAQLVEVSREMSLPVDFPPAD 342
Query 312 NLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTP----GLAASGMV 367
LPAV + APPL SRRLE RL +LG GFGLG+ALTLSRL+AGL P GL +G++
Sbjct 343 PLPAV--AMPAPPLASRRLETRLMMVLGVGFGLGVALTLSRLLAGLAPGLDLGLTLAGIL 400
Query 368 AGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAI 427
V +GLAV WVV RALL DR V++RWT +V +SL +EQLVA+RV+A ETLL+TA+
Sbjct 401 GCVVVGLAVALWVVRTRALLADRAVLERWTADVLSSLGCTLEQLVASRVLAAETLLATAL 460
Query 428 SERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAP 487
D+A NAR A QVS ID ELREHA AAARAAA RDREMP +RAALEAV AELGE G
Sbjct 461 WGSDEAANARAAAQVSAIDSELREHARAAARAAARRDREMPTIRAALEAVCAELGESGTS 520
Query 488 T 488
+
Sbjct 521 S 521
>gi|296167433|ref|ZP_06849832.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897181|gb|EFG76788.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=542
Score = 497 bits (1279), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 312/487 (65%), Positives = 366/487 (76%), Gaps = 10/487 (2%)
Query 7 DDP-AGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVE 65
DDP A VD LVA +AP L P ++RREVVLVTGPWLAGVS V AAL +RLP+++FVE
Sbjct 24 DDPVAAVDALVAGVAPELEA---PAVHRREVVLVTGPWLAGVSAVAAALRDRLPEQKFVE 80
Query 66 TAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTS 125
+AELG G+AP AVVFVVSAA LT SDC LLD AA HTDAVV VVSKIDVHR WRDVL +
Sbjct 81 SAELGSGEAPAAVVFVVSAAAELTASDCALLDAAAAHTDAVVGVVSKIDVHRAWRDVLAA 140
Query 126 NRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRL 185
NR LAA A RY VPWVGAAA P++G+P +D LV + +LADP +ARRN LRAWE RL
Sbjct 141 NRGTLAAHAPRYGGVPWVGAAALPDVGDPDVDALVRTLSARLADPELARRNRLRAWEFRL 200
Query 186 LMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFA 245
VA+RFD DA AGRRARVDALR +R T LRQ R++K+E TI LR QIQ ARV+LS+FA
Sbjct 201 KTVAQRFDRDADGAGRRARVDALRDERSTALRQRREAKTERTITLRGQIQQARVQLSHFA 260
Query 246 RNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPV 305
RNRCS +R ELQE AGLSR+D+ F A+TR R+ EVVAEV +G HLADVA ++GV
Sbjct 261 RNRCSSVRSELQEDAAGLSRRDMPGFEAHTRDRLHEVVAEVNDGTATHLADVAHVVGVAT 320
Query 306 QPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAG----LTPGL 361
P E LP V V PPL SRR E L LLGAGFGLG+ALTLSRL++G L+P L
Sbjct 321 ILPPAEELPTV--DVPPPPLKSRRHETWLMMLLGAGFGLGVALTLSRLMSGLAARLSPAL 378
Query 362 AASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVET 421
+ V A+GLAVT VV+ R+LL DR ++DRW GEVT+SLRSV E+LVATRV+ E+
Sbjct 379 SVVAAVTCAAMGLAVTVLVVHIRSLLRDRALLDRWAGEVTSSLRSVAEELVATRVLVAES 438
Query 422 LLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAEL 481
+LS A+ +D+ E+A V QVS ID ELR HA+AA+RAAA RDREMPAVRAAL+AVRAEL
Sbjct 439 VLSKAVMAQDEVESAEVGGQVSAIDRELRAHAMAASRAAAARDREMPAVRAALDAVRAEL 498
Query 482 GEPGAPT 488
GE G PT
Sbjct 499 GEAGIPT 505
>gi|342859334|ref|ZP_08715988.1| hypothetical protein MCOL_10658 [Mycobacterium colombiense CECT
3035]
gi|342133575|gb|EGT86778.1| hypothetical protein MCOL_10658 [Mycobacterium colombiense CECT
3035]
Length=534
Score = 493 bits (1269), Expect = 3e-137, Method: Compositional matrix adjust.
Identities = 287/465 (62%), Positives = 347/465 (75%), Gaps = 6/465 (1%)
Query 25 GLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSA 84
GL P I R + VLVTGPW+AGV+ V AL +RLPQ +FVE+ +L PG+AP VVFVVSA
Sbjct 36 GLDPPAIQRSDAVLVTGPWMAGVTAVADALRKRLPQHKFVESTDLEPGEAPTVVVFVVSA 95
Query 85 ATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVG 144
A LT SDC LLD A EHTDAVV VVSKIDVH WRD++ +NRD L A A RY R PWVG
Sbjct 96 AANLTPSDCALLDAATEHTDAVVGVVSKIDVHLNWRDIVAANRDSLGAHAPRYGRAPWVG 155
Query 145 AAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRAR 204
AAA P+LG+P +DDLV A+ QL DP +ARRN LRAWESRL VARRFD + + GRRAR
Sbjct 156 AAALPDLGDPDVDDLVDAVSAQLDDPELARRNRLRAWESRLQTVARRFDREVEGPGRRAR 215
Query 205 VDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLS 264
V+ALR++R L+Q RQ+KSE TI LR+QIQ ARV LS+ ARNRC+ +R ELQE+ AGLS
Sbjct 216 VEALREERSAALQQRRQAKSERTITLRSQIQQARVALSHSARNRCATVRTELQEYAAGLS 275
Query 265 RKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPP 324
R+++A F A TR ++ +AEV EGA A LA+VAQ + VP++ P LE LPAV V PP
Sbjct 276 RRNMAGFEAVTRDQLDGAIAEVSEGADAQLAEVAQAMDVPMELPPLERLPAV--DVSPPP 333
Query 325 LTSRRLEIRLTTLLGAGFGLGIALTLSRLVAG----LTPGLAASGMVAGVAIGLAVTAWV 380
L SRR E L LLG GFGLG+ALTL RL++G L P LA +A VAI + +T V
Sbjct 334 LKSRRQETWLMILLGVGFGLGVALTLGRLMSGLASRLNPALAVVAALACVAISVGLTFLV 393
Query 381 VNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVAD 440
+N RALLHDR ++DRW G+VTASL+SV E+LVATRV+ E++LS A+ +D+ ENA+V+
Sbjct 394 INIRALLHDRALLDRWVGDVTASLQSVAEELVATRVLVAESVLSKALLAQDETENAQVSA 453
Query 441 QVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPG 485
V ID ELREHA+AAARA+A RDREMPAV AAL AVRAELGEPG
Sbjct 454 SVGAIDTELREHALAAARASAARDREMPAVTAALAAVRAELGEPG 498
>gi|118470371|ref|YP_884669.1| hypothetical protein MSMEG_0254 [Mycobacterium smegmatis str.
MC2 155]
gi|118171658|gb|ABK72554.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=488
Score = 421 bits (1081), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 257/482 (54%), Positives = 333/482 (70%), Gaps = 7/482 (1%)
Query 8 DP-AGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVET 66
DP A D LVAA+ PGL+ P + R+V+LVTGPWLAG S V AAL ER+PQ FVE+
Sbjct 11 DPIAEADALVAAVDPGLSS---PGVQARDVILVTGPWLAGTSSVLAALRERMPQHTFVES 67
Query 67 AELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSN 126
+L G+AP AVVFVVSAA +TESDC LLD A+++TD VV VSKID HR WRDV ++
Sbjct 68 EDLLAGEAPKAVVFVVSAAAPITESDCALLDLASQYTDVVVGAVSKIDAHRNWRDVRETD 127
Query 127 RDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLL 186
AAR+ RY ++PW G AAAP+LGEP + +LVAA+ ++L D + RRN LRAWE+RL
Sbjct 128 VKTCAARSQRYEQMPWAGVAAAPDLGEPRIGELVAALTERLTDTDMLRRNRLRAWEARLE 187
Query 187 MVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFAR 246
V R++ DA A R+ R++ LR++R + R R +K+E ++ALR+Q+Q ARV+L YFAR
Sbjct 188 AVMGRYEADASGADRKTRLETLRERRAEINRTRRLTKTERSVALRSQLQQARVQLGYFAR 247
Query 247 NRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQ 306
NRC+ +R ELQE VA L R+ I F Y R R +V EV EG HL DVA LG +
Sbjct 248 NRCNSVRTELQEDVAALGRRRIGEFETYVRERCDTIVDEVHEGVTVHLGDVASELG--LD 305
Query 307 PPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGM 366
P P+V P + +PPL +R LE RL +L GFGLG+AL +SRL+AG P LA +G+
Sbjct 306 APATPERPSV-PDIASPPLKTRTLETRLMAVLAVGFGLGVALAVSRLLAGAAPRLAVTGL 364
Query 367 VAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTA 426
G +GL + WVV+ R LLHDR V+DRW + TA++RS VE+LVATRV+ E L+T
Sbjct 365 AVGALVGLLLAVWVVSTRGLLHDRAVLDRWVNDATATVRSAVEELVATRVLQAEADLTTQ 424
Query 427 ISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGA 486
++ RD+AE A A+Q++ ID ELREHAVA ARAAALRDR +P +R AL+AVRA+L A
Sbjct 425 LAGRDEAEAAAAAEQIAAIDTELREHAVATARAAALRDRRIPPLRRALDAVRADLYGDSA 484
Query 487 PT 488
T
Sbjct 485 ST 486
>gi|333988813|ref|YP_004521427.1| hypothetical protein JDM601_0173 [Mycobacterium sp. JDM601]
gi|333484781|gb|AEF34173.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=552
Score = 419 bits (1076), Expect = 7e-115, Method: Compositional matrix adjust.
Identities = 280/479 (59%), Positives = 340/479 (71%), Gaps = 5/479 (1%)
Query 4 AASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRF 63
AA D A VD LVA IAP L P + RR+VV+VTGPWLAGVS V LAERL Q
Sbjct 9 AAEDPVAAVDALVAEIAPVLRP---PAVRRRDVVMVTGPWLAGVSAVAGVLAERLRQWPV 65
Query 64 VETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVL 123
VE AEL PG+ P AVVFVVSAA ALTESDC LLD AA HTD V+ VVSKIDVHR WR++
Sbjct 66 VEAAELPPGEVPTAVVFVVSAAAALTESDCALLDAAAAHTDVVIGVVSKIDVHRQWREMQ 125
Query 124 TSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWES 183
+ R+ LA A RY V WVGAAAAPE GEP +DDLVA + KQL D V RRN LR+WE
Sbjct 126 QTAREALADYAPRYRDVAWVGAAAAPERGEPRVDDLVAELAKQLGDSDVQRRNRLRSWEF 185
Query 184 RLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSY 243
+L A R D DA++ GRRARV L++QR V+RQ R SKSE I LR++I ARV+LSY
Sbjct 186 QLRTDADRIDRDARAEGRRARVTLLQEQRDEVVRQRRMSKSERVIGLRSRIAQARVQLSY 245
Query 244 FARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGV 303
FAR RC+ +R EL E AG++R+ + +F AY RGR++EVVA+V +G HLADVAQ LG+
Sbjct 246 FARKRCASVRGELAEDAAGMTRRRLPQFEAYVRGRLEEVVADVDQGVSEHLADVAQELGL 305
Query 304 PVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAA 363
+ P AP L+SRRLE +L TLLGAGFGLG+AL LSRL A L PGL A
Sbjct 306 SGDAAATTSTPQF--ETGAPALSSRRLETQLMTLLGAGFGLGVALALSRLFANLAPGLTA 363
Query 364 SGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLL 423
+G VA V +G+AVT WVV R LL DR V+DRW GE TA+LRS +++LVA RVVA E+ L
Sbjct 364 AGAVACVVVGVAVTVWVVRIRGLLRDRAVLDRWVGEATAALRSALQELVALRVVAAESAL 423
Query 424 STAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELG 482
+ ++ER++ E R AD+++ +D ELREHA A ARAAA+RDR++P + AL AVR+ELG
Sbjct 424 TAELAERNETEAVRAADRIAGLDRELREHAAATARAAAVRDRQLPTLHRALAAVRSELG 482
>gi|169631578|ref|YP_001705227.1| hypothetical protein MAB_4504c [Mycobacterium abscessus ATCC
19977]
gi|169243545|emb|CAM64573.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=481
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 215/471 (46%), Positives = 285/471 (61%), Gaps = 11/471 (2%)
Query 12 VDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGP 71
VD+LV A+ P L LG + ++ V+VTG WLAG S + L R+P R VE +L
Sbjct 9 VDQLVLAVDPALGPLG---VEPQDAVMVTGSWLAGASTLATGLKSRMPGTRIVEPEDLRH 65
Query 72 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 131
G +P AVVFV S LT SDC L+ AA +TDA++AVVSKIDVH+ WR+V+ NR+ LA
Sbjct 66 GQSPAAVVFVCSGTAPLTPSDCGLIQLAAANTDALIAVVSKIDVHQSWREVMERNREILA 125
Query 132 ARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARR 191
SR+ + W+G + P LD+L +A++K P +A RN LRAW +RL +
Sbjct 126 QHDSRFRDITWLGVST--RGAAPGLDELASAVRKIRGKPDLAERNRLRAWVTRLQGML-- 181
Query 192 FDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSL 251
AG AR D LR QR+ +R+ R SKSE T+ALR +I AR+ L YFAR R
Sbjct 182 --NVPPEAGEGARADELRNQRQAAVRRTRSSKSERTLALRNRIAQARMTLLYFARKRVGS 239
Query 252 LRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADV-AQLLGVPVQPPVL 310
+ EL+E +A L R+D+A F R RV ++VAEV +G HLA++ A++ V P
Sbjct 240 VGGELREDIAELKRRDVAGFGDRVRRRVADIVAEVEQGTEEHLAEISAEVTQHWVAPRPS 299
Query 311 ENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGV 370
N P V P PP+ SRRLE R+ L G FGLG ALT+SRLVA PGLA G+ G+
Sbjct 300 ANRP-VPPEAGDPPVRSRRLETRMMALFGIFFGLGAALTVSRLVAYARPGLAPVGLAVGL 358
Query 371 AIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISER 430
G + W+V R LLHDR V+DRW G+ LR+ +EQ VA RV+ VET L+ + E
Sbjct 359 VAGAVIAVWLVAVRGLLHDRTVLDRWLGDTMGELRAYLEQWVAARVLEVETRLNADLVEI 418
Query 431 DDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAEL 481
D+ EN ++A +V ID ELRE A+ ARA ALR+R++P+V AL V L
Sbjct 419 DERENDKLAARVGQIDSELREAAMNTARATALRNRDLPSVHKALTKVTERL 469
>gi|126432777|ref|YP_001068468.1| hypothetical protein Mjls_0164 [Mycobacterium sp. JLS]
gi|126232577|gb|ABN95977.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=497
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 250/462 (55%), Positives = 309/462 (67%), Gaps = 4/462 (0%)
Query 26 LGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAA 85
L P + + VLVTGPWLAGVS + A L +RLP+ FVE EL G APVAVVF VSA
Sbjct 22 LDSPGVQSSDSVLVTGPWLAGVSSLIAVLRDRLPEVSFVEADELPAGSAPVAVVFAVSAV 81
Query 86 TALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGA 145
+AL SDC LLD AA+HTD V+ VV+KIDVH WR+V+ ++R+ L A RYA +PWVG
Sbjct 82 SALAGSDCELLDLAADHTDCVIGVVTKIDVHLDWREVMAADRELLGAHRRRYAALPWVGV 141
Query 146 AAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARV 205
AAAP+ G+P +DDLV ++ L DPAV RRN LRAWES+L V R+ D + A R ARV
Sbjct 142 AAAPDHGDPMVDDLVDLLRDTLGDPAVLRRNRLRAWESQLEKVVARYRADGEGADRHARV 201
Query 206 DALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSR 265
ALR QR + R R KS+ IALR+QIQ ARV+L+YFARNRC+ +R ELQE +A L R
Sbjct 202 SALRAQRDEIRRARRVEKSQRAIALRSQIQQARVQLTYFARNRCASVRGELQEDIAELGR 261
Query 266 KDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGV-PVQPPVLENLPAVLPTVVAPP 324
+ + F RGR EV+ EV EG HL VA L + V P LP P
Sbjct 262 RRLDAFEQTVRGRAAEVMTEVDEGVTTHLTAVAADLHLDDVPSPPQPIPVPDLP---GPS 318
Query 325 LTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNAR 384
L SRRLE RL LLGAGFGLG+AL +SRL +G+ PGL +G++AG A GLAV WVV R
Sbjct 319 LRSRRLETRLMMLLGAGFGLGVALAVSRLFSGVDPGLTVAGVLAGAAAGLAVAVWVVGIR 378
Query 385 ALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSI 444
LLHDR V+DRW +VTA+LRS E+ VATRV+A E L+ A++ + A+ A +++
Sbjct 379 GLLHDRGVLDRWVADVTATLRSAAEEAVATRVLAAEAALTAALAAEEAADADAAAVRIAE 438
Query 445 IDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGA 486
ID ELREHA A ARAAALRDR +P ++ ALEAV AEL + A
Sbjct 439 IDAELREHAAATARAAALRDRRLPGLQRALEAVCAELYDKKA 480
>gi|108797155|ref|YP_637352.1| hypothetical protein Mmcs_0175 [Mycobacterium sp. MCS]
gi|119866240|ref|YP_936192.1| hypothetical protein Mkms_0184 [Mycobacterium sp. KMS]
gi|108767574|gb|ABG06296.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692329|gb|ABL89402.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=497
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 250/462 (55%), Positives = 310/462 (68%), Gaps = 4/462 (0%)
Query 26 LGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAA 85
L P + + VLVTGPWLAGVS + A L +RLP+ FVE EL G APVAVVF VSA
Sbjct 22 LDSPGVQSSDSVLVTGPWLAGVSSLIAVLRDRLPEVSFVEADELPAGSAPVAVVFAVSAV 81
Query 86 TALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGA 145
+AL SDC LLD AA+HTD V+ VV+KIDVH WR+V+ ++R+ L A RYA +PWVG
Sbjct 82 SALAGSDCELLDLAADHTDCVIGVVTKIDVHLDWREVMAADRELLGAHRRRYAALPWVGV 141
Query 146 AAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARV 205
AAAP+ G+P +DDLV ++ L DP V RRN LRAWES+L V R+ D + A R ARV
Sbjct 142 AAAPDDGDPMVDDLVDLLRDTLGDPEVLRRNRLRAWESQLEKVVARYRADGEGADRHARV 201
Query 206 DALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSR 265
ALR QR + R R KS+ IALR+QIQ ARV+L+YFARNRC+ +R ELQE +A L R
Sbjct 202 SALRAQRDEIRRARRVEKSQRAIALRSQIQQARVQLTYFARNRCASVRGELQEDIAELGR 261
Query 266 KDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGV-PVQPPVLENLPAVLPTVVAPP 324
+ + F RGR EV+ EV EG HL VA L + V PP LP P
Sbjct 262 RRLDAFEQTVRGRAAEVMTEVDEGVTTHLTAVAADLHLDDVPPPPQPIPVPDLP---GPS 318
Query 325 LTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNAR 384
L SRRLE RL LLGAGFGLG+AL +SRL +G+ PGL +G++AG A GLAV WVV R
Sbjct 319 LRSRRLETRLMMLLGAGFGLGVALAVSRLFSGVDPGLTVAGVLAGAAAGLAVAVWVVGIR 378
Query 385 ALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSI 444
LLHDR V+DRW +VTA+LRS E+ VATRV+A E L+ A++ ++A+ A +++
Sbjct 379 GLLHDRGVLDRWVADVTATLRSAAEEAVATRVLAAEAALTAALAAEEEADADAAAVRIAE 438
Query 445 IDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGA 486
ID ELREHA A ARAAALRDR +P ++ ALEAV AEL + A
Sbjct 439 IDAELREHAAATARAAALRDRRLPGLQRALEAVCAELYDKKA 480
>gi|120401227|ref|YP_951056.1| hypothetical protein Mvan_0200 [Mycobacterium vanbaalenii PYR-1]
gi|119954045|gb|ABM11050.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=419
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 187/424 (45%), Positives = 246/424 (59%), Gaps = 35/424 (8%)
Query 35 EVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDCV 94
E VLV GP AGVSGV A L R+P RFVE E G P VVFVVSA +T SDCV
Sbjct 5 ETVLVAGPPRAGVSGVVAELRRRMPSHRFVEAGETGAPQRPAVVVFVVSAVAPITRSDCV 64
Query 95 LLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGAAAAPELGEP 154
L D A TDAVVAV++KID HR W VL +NR+ LA A R+ RVPWVGAAAAP LGEP
Sbjct 65 LADRVAASTDAVVAVLAKIDDHRDWTAVLEANRECLAGHAGRFGRVPWVGAAAAPRLGEP 124
Query 155 YLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRRT 214
+D+LVA ++ QL DP RN LRA ESR + LR R
Sbjct 125 RMDELVALLRAQLDDPTRPARNALRALESRECL--------------------LRGTRDR 164
Query 215 VLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAY 274
++++ R+ SE ALR+ IQ +R+ L++ AR RC+ LR +L + R ++ RFA
Sbjct 165 LVQRRRREASERATALRSAIQQSRLTLTHTARRRCAELRTDLLAEATAVGRGEVCRFAHR 224
Query 275 TRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRL 334
R R EV+A V A+ D PP + + PPL +RRLE RL
Sbjct 225 ARRRSAEVLAAVEADLTAYTHDA---------PPRV----TAPLLLPDPPLRARRLETRL 271
Query 335 TTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVD 394
T+LGAGFGLG+A+ ++R +AGL P A + + AG AIGL TAWV+ ARALLHDR V++
Sbjct 272 MTVLGAGFGLGVAVVVTRFLAGLAPEFATAALTAGAAIGLVTTAWVIRARALLHDRAVLE 331
Query 395 RWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAV 454
RW + A+LR+ VE+ VA ++A ET ++ + A + +++ I+ EL H +
Sbjct 332 RWAADGVAALRAAVEERVAAGMLAAETAIAAESARAAAARDGDTRRRIAAIEAEL--HDL 389
Query 455 AAAR 458
+ AR
Sbjct 390 SQAR 393
>gi|315441973|ref|YP_004074852.1| hypothetical protein Mspyr1_03030 [Mycobacterium sp. Spyr1]
gi|315260276|gb|ADT97017.1| hypothetical protein Mspyr1_03030 [Mycobacterium sp. Spyr1]
Length=416
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 178/418 (43%), Positives = 240/418 (58%), Gaps = 36/418 (8%)
Query 35 EVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDCV 94
EVVLVTGP AGVS V A L +R+P R ++ AE G PVAVVFVVSA LTESDCV
Sbjct 5 EVVLVTGPPRAGVSTVAAGLRQRMPAVRVLDGAE--AGTTPVAVVFVVSAVAPLTESDCV 62
Query 95 LLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGAAAAPELGEP 154
L D AA + VVAVVSKID HRGWR+VL + R + R A VPW+G AAAP LGEP
Sbjct 63 LADAAAVDAEVVVAVVSKIDDHRGWREVLEAGRAVADRSSGRLAGVPWLGVAAAPRLGEP 122
Query 155 YLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRRT 214
LDDLV + + LADP+ RN LRA + R+ + DG + RR R+DA
Sbjct 123 RLDDLVDVLGRALADPSQRARNSLRAKQFRVSRLQDERDG-LVALRRRTRLDA------- 174
Query 215 VLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAY 274
GR S+ ++ RV LS+ R RC+ LR +L + R+D+A F +
Sbjct 175 ---AGRLSR---------DLRQLRVTLSHDVRRRCAGLRADLLHRAGAVGRRDVAGFPQH 222
Query 275 TRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSR--RLEI 332
R EV+ + + D+ ++ G V ++P LP P R RLE
Sbjct 223 AWERCTEVLTGIEQ-------DITEVTGADVG---CGDVPVNLPPDPPPHPPPRSWRLER 272
Query 333 RLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVV 392
+LT +LGAGFGLG+A+ ++RLVAGL PGL A+G+ G +G TAWVV ARALLHDR V
Sbjct 273 QLTAVLGAGFGLGVAMVVTRLVAGLAPGLTAAGLAVGGVLGFLTTAWVVRARALLHDRAV 332
Query 393 VDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELR 450
+ W + A++R+ ++ V T +AVE + A + D E+A + +++ +D E++
Sbjct 333 LQAWAADAVAAVRAAADERVGTGTLAVEAGRAGAGARSD--EDAALGRRIASLDAEIQ 388
>gi|145221056|ref|YP_001131734.1| hypothetical protein Mflv_0452 [Mycobacterium gilvum PYR-GCK]
gi|145213542|gb|ABP42946.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=408
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 173/414 (42%), Positives = 236/414 (58%), Gaps = 36/414 (8%)
Query 39 VTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDT 98
+TGP AGVS V A L +R+P R ++ AE G PVAVVFVVSA LTESDCVL D
Sbjct 1 MTGPPRAGVSTVAAGLRQRMPAVRVLDGAE--AGTTPVAVVFVVSAVAPLTESDCVLADA 58
Query 99 AAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDD 158
AA + VVAVVSKID HRGWR+VL + R + R A VPW+G AAAP LGEP LDD
Sbjct 59 AAVDAEVVVAVVSKIDDHRGWREVLEAGRAVADRSSGRLAGVPWLGVAAAPRLGEPRLDD 118
Query 159 LVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQ 218
LV + + LADP+ RN LRA + R+ + DG + RR R+DA
Sbjct 119 LVDVLGRALADPSQRARNSLRAKQFRVSRLQDERDG-LVALRRRTRLDA----------A 167
Query 219 GRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGR 278
GR S+ ++ RV LS+ R RC+ LR +L + R+D+A F + R
Sbjct 168 GRLSR---------DLRQLRVTLSHDVRRRCAGLRADLLHRAGAVGRRDVAGFPQHAWER 218
Query 279 VQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSR--RLEIRLTT 336
EV+ + + D+ ++ G V ++P LP P R RLE +LT
Sbjct 219 CTEVLTGIEQ-------DITEVTGADVG---CGDVPVNLPPDPPPHPPPRSWRLERQLTA 268
Query 337 LLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRW 396
+LGAGFGLG+A+ ++RLVAGL PGL A+G+ G +G TAWVV ARALLHDR V+ W
Sbjct 269 VLGAGFGLGVAMVVTRLVAGLAPGLTAAGLAVGGVLGFLTTAWVVRARALLHDRAVLQAW 328
Query 397 TGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELR 450
+ A++R+ ++ V T +AVE + A + D E+A + +++ +D E++
Sbjct 329 AADAVAAVRAAADERVGTGTLAVEAGRAGAGARSD--EDAALGRRIASLDAEIQ 380
>gi|111022145|ref|YP_705117.1| hypothetical protein RHA1_ro05178 [Rhodococcus jostii RHA1]
gi|110821675|gb|ABG96959.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=482
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 157/494 (32%), Positives = 211/494 (43%), Gaps = 58/494 (11%)
Query 8 DPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAG----VSGVRAALAERLPQRRF 63
+P GV L + AP + V V GP AG V G+RA A L F
Sbjct 21 NPDGVARLTSGGAP------------QRGVFVAGPRHAGKTTLVGGLRALDASGLA---F 65
Query 64 VETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVL 123
VE P DA V ++ V AA L + +LD A VV ++K DVHR W V
Sbjct 66 VED----PIDARV-ILMVFDAAGPLGREELSVLDVVARPARPVVFALTKTDVHRNWAGVS 120
Query 124 TSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWES 183
NR LA ++R+A AA E L L+ A + Q DP A +L
Sbjct 121 ERNRALLARHSTRFADAEIHPVAAGGSGAEALLAALLRAARAQGPDPRSATEAVLEQTRR 180
Query 184 RLLMVARRFDGDAQSAGRRA-RVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLS 242
++ AR A RA RV AL LR GR ++E LR Q+Q A+V+L
Sbjct 181 MIVATARSVRETEPGAELRAERVRAL------TLRDGR--RTERVAQLRGQVQLAKVELM 232
Query 243 YFARNRC----SLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVA 298
+ +C + R E+ G R A R R V A V A L D+
Sbjct 233 HEVAAQCRAAGTTARAEIDRAGRGTLEGYPDRLAEMVRERSGAVDAAV----TARLDDLR 288
Query 299 QLLGVPVQPPVLENLPAVLPTVVAP--PLTSRR-LEIRLTTLLGAGFGLGIALTLSRLVA 355
+GV V LP VAP P R LE R+T L+GA GLG L RLV
Sbjct 289 SRVGVTVS---ASGAAVPLPEPVAPDGPEPRHRGLEDRMTILIGASAGLG----LGRLVV 341
Query 356 G---LTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLV 412
+ P L + + +A+G W+ AR + +R + +W + RS EQ V
Sbjct 342 SPLSMVPALDIATIPLTLALGAVAAWWLTKARGHVAERAHMRQWATDALVHARSQWEQFV 401
Query 413 ATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALR--DREMPAV 470
R++A E + AI V ++V+ IDGELR +AA R L +R++ AV
Sbjct 402 LGRLLAAEARVGEAIIAESRVCARDVDERVAQIDGELRR--LAARRNGQLSSCERDLGAV 459
Query 471 RAALEAVRAELGEP 484
L+ VR + GEP
Sbjct 460 DRGLQEVRRQPGEP 473
>gi|226364638|ref|YP_002782420.1| hypothetical protein ROP_52280 [Rhodococcus opacus B4]
gi|226243127|dbj|BAH53475.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=482
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 144/459 (32%), Positives = 205/459 (45%), Gaps = 32/459 (6%)
Query 37 VLVTGPWLAG----VSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESD 92
VLV GP AG V G+RA L FVE P DA V V+ V+ AA L +
Sbjct 38 VLVAGPRRAGKTTLVRGLRALDQSALT---FVED----PLDAGV-VLMVLDAAAPLGREE 89
Query 93 CVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGAAAAPELG 152
+LD A VV ++K DVHR W V +R LA A R+A A +G
Sbjct 90 LSVLDVVARPACPVVFALTKTDVHRDWAGVRERDRTLLARHAVRFADAEIHPVA----VG 145
Query 153 EPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQR 212
++ L+AA+ + D A R++ A ES L R A+S LR +R
Sbjct 146 VSGVEVLLAALLRAARDEA---RDLRPAIESVLEQTRRMIAATARSVRETEPGAELRAER 202
Query 213 --RTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIAR 270
LR GR ++E LR Q+Q A+V+L + ++ + + R +A
Sbjct 203 VRALALRDGR--RTERIAQLRGQVQLAKVELLHEVASQVRAAGTSARSEIDRAGRGTLAG 260
Query 271 FAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSRR- 329
+ V+E V A L D+ GVP P P P V P R
Sbjct 261 YPDRLAAIVRERSGAVDAAVTARLDDLRSRAGVPASDPEAAG-PLPEPVVPEGPEPRHRG 319
Query 330 LEIRLTTLLGAGFGLGIA-LTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLH 388
LE R+T L+GA GLG+ L +S L + P L + + +A+G W+ +RA +
Sbjct 320 LEDRMTILIGASAGLGLGRLVVSPL--SMVPALDIATIPLTLALGAVAAWWLTRSRAHVA 377
Query 389 DRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGE 448
+R V +W E +RS EQ V R++A ET +S A+ ++V+ IDGE
Sbjct 378 ERAHVRQWATEALVHVRSQWEQFVLARLLAAETRVSEAVLAESRVAAREADERVAQIDGE 437
Query 449 LREHAVAAARAAALR--DREMPAVRAALEAVRAELGEPG 485
LR +AA R+ L +R++ AV L+ VR GEP
Sbjct 438 LRR--LAARRSGQLSSCERDLAAVDRGLQEVRRPAGEPN 474
>gi|294994684|ref|ZP_06800375.1| hypothetical protein Mtub2_09277 [Mycobacterium tuberculosis
210]
Length=56
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/53 (99%), Positives = 52/53 (99%), Gaps = 0/53 (0%)
Query 440 DQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGLF 492
DQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPG PTTGLF
Sbjct 4 DQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGTPTTGLF 56
>gi|256380982|ref|YP_003104642.1| HSR1-like GTP-binding protein [Actinosynnema mirum DSM 43827]
gi|255925285|gb|ACU40796.1| GTP-binding protein HSR1-related [Actinosynnema mirum DSM 43827]
Length=610
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 114/400 (29%), Positives = 174/400 (44%), Gaps = 36/400 (9%)
Query 80 FVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRY-- 137
FVV A+ T + L + E + VV ++K+D RGWR+V+ ++R LA A R+
Sbjct 172 FVVDASAPFTRGELEFLRSVGERVETVVFALTKVDQFRGWREVVEADRALLAQHAPRFAG 231
Query 138 -------ARVPWVGAAAAPELGEPYLDDL--VAAIQKQLADPAVAR------RNMLRAWE 182
AR+ + A A L + VA +Q L + V R N LRA
Sbjct 232 AVFHPVSARMFEMAAKAPNPDAAAMLRERSGVAELQAALQELVVGRAAMLGEANGLRALA 291
Query 183 SRL--LMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVK 240
+ L L+ D A SAG + + LR +R + Q R S + LR ++Q ARV+
Sbjct 292 TVLDELVAVAEADLRALSAGEE-QAEVLRGRRDELNSQRRSSTRSWQVKLRGEVQRARVE 350
Query 241 LSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
++ + L+ + + R + +Q V + + G L VA L
Sbjct 351 GNHEVARQVRDLQTWFRTAIDAADRDQLVALPGQVDAALQVVSSRISAGLGHRLGKVADL 410
Query 301 ----LGVPVQPPVLENLPA--VLPTVVAPPLTSR--RLEIRLTTLLGAGFGLGIALTLSR 352
L P + V+ A V P +V P R E +L +G GLG +
Sbjct 411 ALADLFTPDEMAVIRGQFARGVTPPIVLRPPEKRTPTAEDKLLVFMGISGGLGAGRLAAL 470
Query 353 LVAGLTPG-LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQL 411
+AGL G L + A + IGL W+ R D+ + +W + A RS ++QL
Sbjct 471 PLAGLGIGALNPVVLPATLVIGLGAGWWMARTRKHSADKQHIKQWLSDSIADARSTLDQL 530
Query 412 VATRVVAVETLLSTAISERDDAENARVADQVSIIDGELRE 451
VA +++ VE LS A+ DDA +A +V I+ ELRE
Sbjct 531 VAEQLIEVEQQLSLAL---DDA----LAKRVEAIEAELRE 563
>gi|302531258|ref|ZP_07283600.1| dynamin [Streptomyces sp. AA4]
gi|302440153|gb|EFL11969.1| dynamin [Streptomyces sp. AA4]
Length=608
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 113/411 (28%), Positives = 179/411 (44%), Gaps = 56/411 (13%)
Query 78 VVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRY 137
+VFVV A+ T ++ L A+ + VV V++K D RGWR++L ++R LA A R+
Sbjct 170 LVFVVDASAPFTSTELQFLREVADRVETVVFVLAKTDAFRGWREILDADRQLLAEHAPRF 229
Query 138 ---------ARVPWVGAAAAPELGEPYLDDL--VAAIQKQLADPAVARR------NMLRA 180
ARV A A + L + +AA+Q L + V R N LR+
Sbjct 230 ADAVFHPVSARVFETAAKAPNDQVAAMLREKSGIAAVQVALQELLVGRSMMLKEANTLRS 289
Query 181 WESRLLMVARRFD--------GDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRA 232
S L + + G+A++ RAR D L+ QRRT R G Q + LR
Sbjct 290 LSSALAGIKAKLQAESRALSAGEAEAEQLRARRDDLQSQRRTSTR-GWQ------LRLRG 342
Query 233 QIQHARVKLSYFARNRCSLLRVELQEHVAGLSRK---------DIARFAAYTRGRVQ--E 281
+IQ RV++ + + + ++ + R DIA A R +Q +
Sbjct 343 EIQRTRVEVGHESSREMREAQAHFRQRIDAAKRDELAALPQEVDIALQTASQRVSMQLSQ 402
Query 282 VVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVL-PTVVAPPLTSRRLEIRLTTLLGA 340
+ +V A++ L +L + Q P VL P PP +L + + G
Sbjct 403 RLNQVTNTALSELFSAEELDVIRAQFARAGGPPVVLRPPDKKPPTAEDKLLVFMGISGGV 462
Query 341 GFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEV 400
G G AL L+ VA L P + + A + IGL W+ R D+ + +W E
Sbjct 463 GAGKIAALPLAG-VAILNPVV----LPATIVIGLGAGWWMARTRKHASDKQHLKQWLVEA 517
Query 401 TASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELRE 451
A RS ++QL+A +++ E LS A+ E + ++ I+ EL+E
Sbjct 518 IADARSTLDQLIAEQLIEAEQQLSLALDE-------ALGRRIEAIEAELKE 561
>gi|134103690|ref|YP_001109351.1| dynamin [Saccharopolyspora erythraea NRRL 2338]
gi|291004775|ref|ZP_06562748.1| dynamin [Saccharopolyspora erythraea NRRL 2338]
gi|133916313|emb|CAM06426.1| dynamin [Saccharopolyspora erythraea NRRL 2338]
Length=619
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 117/429 (28%), Positives = 182/429 (43%), Gaps = 56/429 (13%)
Query 80 FVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYAR 139
FVV A+ T + L T + + VV ++K D HRGWR VL +R LA A R+A
Sbjct 180 FVVDASAPFTRGELDFLRTVGDRVETVVFALAKTDQHRGWRQVLEEDRRLLAEHAPRFAD 239
Query 140 VPWVG--------AAAAPE------LGEPY-LDDLVAAIQKQLA--DPAVARRNMLRAWE 182
VP AA AP L E + +L +A+++ +A + N +RA
Sbjct 240 VPIYPVSARMQEMAAKAPSEQAGAMLREKSGITELRSALEQLVAGRSAMLGEANTMRALS 299
Query 183 SRLLMVARRFD--------GDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQI 234
+ L + + + G+ ++ R R D L RR+ R G Q + LR +I
Sbjct 300 TVLGELTAKLEAEKRALTVGEDEAESLRGRRDELTTARRSSTR-GWQ------VRLRGEI 352
Query 235 QHARVKLSYFARNRCSLLRVELQEHVAGLSRK---------DIARFAAYTR--GRVQEVV 283
Q RV+ + + ++ + + G R+ DIA TR + +
Sbjct 353 QRTRVEAGHEVTRQVREVQNWFRRSIDGADRQQLPELPQQVDIALQMVSTRVATMLSTRL 412
Query 284 AEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVL-PTVVAPPLTSRRLEIRLTTLLGAGF 342
A+V E ++A L +L + Q P L P PP E +L +G
Sbjct 413 AKVAESSLAELFSAEELDVIRSQFARGAQAPIALRPPDKRPPTA----EDKLLVFMGISG 468
Query 343 GLGIALTLSRLVAGLTPG-LAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVT 401
GLG+ + +AG+ G L + + +GL W+ R D+ + +W E
Sbjct 469 GLGVGRAAAMPLAGVGIGVLNPIVLPVTIVLGLGAGWWMARTRKHAADKQHMKQWLTEAI 528
Query 402 ASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAA 461
A RS ++QLV+ +++ E LS A+ DDA R + I+GELRE A AA
Sbjct 529 ADARSTLDQLVSEQLIEAEQQLSLAL---DDALTRR----IEAIEGELREVDKALKMDAA 581
Query 462 LRDREMPAV 470
R R + V
Sbjct 582 ERSRRLQTV 590
>gi|340532753|gb|AEK47958.1| dynamin [Amycolatopsis mediterranei S699]
Length=612
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/411 (27%), Positives = 178/411 (44%), Gaps = 56/411 (13%)
Query 78 VVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRY 137
++FVV A+ T ++ L E + VV ++K+D+ RGWR+V+ ++R L A R+
Sbjct 173 LLFVVDASAPFTSTELQFLRDVGERVETVVFALTKVDMFRGWREVMEADRQLLREHAPRF 232
Query 138 ---------ARVPWVGAAAAPELGEPYLDDL--VAAIQKQLADPAVARR------NMLRA 180
AR+ A A E L + VAAIQ L + V R N LRA
Sbjct 233 ADAVFHPVSARLFETAAKAPNEQLAAMLREKSGVAAIQMALQELLVGRSAMLGEANTLRA 292
Query 181 WESRLLMVARRFD--------GDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRA 232
S L + + G+A++ R R D L+ +RRT R G Q K LR
Sbjct 293 LSSALGELKAKLQAESRALSAGEAEAEQLRERRDQLQAERRTSTR-GWQLK------LRG 345
Query 233 QIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAY-------TRGRVQEVVA- 284
++Q RV++ + + + + ++ + R ++A T R+ +++
Sbjct 346 EVQRTRVEVGHESARQMRDAQTHFRQLIDAAKRDELAALPQQVDIALQTTSQRISMLLSQ 405
Query 285 ---EVGEGAVAHLADVAQLLGVPVQPPVLENLPAVL-PTVVAPPLTSRRLEIRLTTLLGA 340
+V +++ L +L + Q P VL P PP +L + + G
Sbjct 406 RLNQVTNVSLSELFSPEELDVIRAQFARAGGPPVVLRPPDKKPPTAEDKLLVFMGISGGV 465
Query 341 GFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEV 400
G G AL L+ VA L P + + A + IGL W+ R D+ + +W E
Sbjct 466 GAGKVAALPLAG-VAILNPVV----LPATIIIGLGAGWWMARTRKHAADKQHMKQWLVEA 520
Query 401 TASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELRE 451
A RS ++QLVA +++ E LS A+ E + ++ I+ EL+E
Sbjct 521 IADARSTLDQLVAEQLIEAEQQLSMALDE-------ALGRRIDAIEAELKE 564
>gi|300791054|ref|YP_003771345.1| dynamin [Amycolatopsis mediterranei U32]
gi|299800568|gb|ADJ50943.1| dynamin [Amycolatopsis mediterranei U32]
Length=612
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/411 (27%), Positives = 178/411 (44%), Gaps = 56/411 (13%)
Query 78 VVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRY 137
++FVV A+ T ++ L E + VV ++K+D+ RGWR+V+ ++R L A R+
Sbjct 173 LLFVVDASAPFTSTELQFLRDVGERVETVVFALTKVDMFRGWREVMEADRQLLREHAPRF 232
Query 138 ---------ARVPWVGAAAAPELGEPYLDDL--VAAIQKQLADPAVARR------NMLRA 180
AR+ A A E L + VAAIQ L + V R N LRA
Sbjct 233 ADAVFHPVSARLFETAAKAPNEQLAAMLREKSGVAAIQMALQELLVGRSAMLGEANTLRA 292
Query 181 WESRLLMVARRFD--------GDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRA 232
S L + + G+A++ R R D L+ +RRT R G Q K LR
Sbjct 293 LSSALGELKAKLQAESRALSAGEAEAEQLRERRDQLQAERRTSTR-GWQLK------LRG 345
Query 233 QIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAY-------TRGRVQEVVA- 284
++Q RV++ + + + + ++ + R ++A T R+ +++
Sbjct 346 EVQRTRVEVGHESARQMRDAQTHFRQLIDAAKRDELAALPQQVDIALQTTSQRISMLLSQ 405
Query 285 ---EVGEGAVAHLADVAQLLGVPVQPPVLENLPAVL-PTVVAPPLTSRRLEIRLTTLLGA 340
+V +++ L +L + Q P VL P PP +L + + G
Sbjct 406 RLNQVTNVSLSELFSPEELDVIRAQFARAGGPPVVLRPPDKKPPTAEDKLLVFMGISGGV 465
Query 341 GFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEV 400
G G AL L+ VA L P + + A + IGL W+ R D+ + +W E
Sbjct 466 GAGKVAALPLAG-VAILNPVV----LPATIIIGLGAGWWMARTRKHAADKQHMKQWLVEA 520
Query 401 TASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELRE 451
A RS ++QLVA +++ E LS A+ E + ++ I+ EL+E
Sbjct 521 IADARSTLDQLVAEQLIEAEQQLSMALDE-------ALGRRIDAIEAELKE 564
>gi|257057847|ref|YP_003135679.1| GTPase [Saccharomonospora viridis DSM 43017]
gi|256587719|gb|ACU98852.1| GTPase of unknown function [Saccharomonospora viridis DSM 43017]
Length=617
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 108/419 (26%), Positives = 174/419 (42%), Gaps = 72/419 (17%)
Query 78 VVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRY 137
++FVV A+ T + L A+ + VV +SK D RGWR +L +N+ LA A R+
Sbjct 176 LLFVVDASAPFTMPELRFLTMLADRVETVVFALSKTDQFRGWRQILEANKRLLAEHAPRF 235
Query 138 ARVPW---------VGAAAAPELGEPYLDDL--VAAIQKQLADPAVAR------RNMLRA 180
A P+ + A A E L + VA +Q L + V R N LRA
Sbjct 236 ADCPFHPVSARMFELAAKAPNEQAAAMLREKSGVAELQTALQELLVGRAAMLGEANTLRA 295
Query 181 WESRL------LMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQI 234
S L L R +S R+ LR++R ++ R S + LR ++
Sbjct 296 LSSALAEQRVKLTANERALRSGESEARQ-----LRERRDQLVADRRSSTRGWQLRLRGEV 350
Query 235 QHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEV-----------V 283
Q AR+ L + + + ++ + R+++A +Q V +
Sbjct 351 QRARIDLGHEVGRQMREAQAYFRQRIDAAGREELAALPQQVDATLQTVSQRVSGLLTQRL 410
Query 284 AEVGEGAVAHLADVAQLLGVPVQ------PPVLENLPAVLPTVVAPPLTSRRLEIRLTTL 337
E+ E +A L +L + Q PPV+ + P PP E +L
Sbjct 411 NEITEAVLAELFSAEELAVIRAQLARGGGPPVV-----LRPPDKRPPTA----EDKLLVF 461
Query 338 LGAGFGLGIALTLSRLVAGLTPGLAASGMV-----AGVAIGLAVTAWVVNARALLHDRVV 392
+G G G A +LVA P ++A+ A + IGL W+ R D+
Sbjct 462 MGVSGGAGAA----KLVAA--PFVSAALFAPVVLPATIVIGLGAGWWMARTRRHAADKQH 515
Query 393 VDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELRE 451
+W E A RS ++QLVA +++ E L+ A+ DDA ++ ++ I+ EL+E
Sbjct 516 AKQWLIESIADARSTLDQLVAEQLIEAEQQLALAL---DDA----LSRRIEAIEAELKE 567
>gi|325677141|ref|ZP_08156809.1| hypothetical protein HMPREF0724_14592 [Rhodococcus equi ATCC
33707]
gi|325552046|gb|EGD21740.1| hypothetical protein HMPREF0724_14592 [Rhodococcus equi ATCC
33707]
Length=477
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 116/424 (28%), Positives = 185/424 (44%), Gaps = 45/424 (10%)
Query 48 SGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVV 107
+GVR LA +P PGDA AVVFV+ A + L + LD H + V+
Sbjct 47 TGVRDGLAAHVP-------VTDRPGDA-AAVVFVLDALSVLGRDELSALDVVGAHVERVL 98
Query 108 AVVSKIDVHRGWRDVLTSNRDR--LAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQK 165
+ D R+ RD L A + RYA + A +L A++
Sbjct 99 -FTTPTDAPGALRE-----RDEALLRAHSPRYADARILNGA-----------ELHGAVRA 141
Query 166 QLADPA--VARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQ-S 222
L PA + RN RA S + R + A+S RA A +QRRT L R
Sbjct 142 ALDAPAGVIVERNRRRAALSLVEETCRMINTTAESV--RADDIAPLRQRRTRLTSNRGGD 199
Query 223 KSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEV 282
++E + +R+ +Q AR++L + R L ++ + R ++A + +
Sbjct 200 RAELSALVRSDVQRARIELVHTVGVRIRELSTLVRSEIDRAGRHELATYRDRFAQLADAL 259
Query 283 VAEVGEGAVAHLADV---AQLLGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLG 339
AEV A L D+ A L PV+PP + +V AP R +E R+ ++G
Sbjct 260 TAEVDTVAGHRLDDLVVRAGLTHPPVRPPEPTEV-----SVSAPEPRHRGVEDRMMVIVG 314
Query 340 AGFGLGIA-LTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTG 398
A G+G+ L ++ L + P L + + + +G A W+ +R L DR + +W
Sbjct 315 ASAGVGLGRLAVAPL--SMVPALDIATIPVTLTLGGAAAWWLARSRRHLADRAHLRQWAV 372
Query 399 EVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAAR 458
+ T LR+ +EQ V R++ E + + A A V +++ +D E+R VAA R
Sbjct 373 DATTGLRAQLEQRVLARLLETEAAVGQRVLADGRAATAAVDAEIAAVDAEIRR--VAAQR 430
Query 459 AAAL 462
+ L
Sbjct 431 SGRL 434
>gi|312141442|ref|YP_004008778.1| hypothetical protein REQ_41300 [Rhodococcus equi 103S]
gi|311890781|emb|CBH50100.1| hypothetical protein REQ_41300 [Rhodococcus equi 103S]
Length=477
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 121/439 (28%), Positives = 191/439 (44%), Gaps = 48/439 (10%)
Query 34 REVVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDC 93
R V + T P L +GVR LA +P PGDA AVVFV+ A + L +
Sbjct 34 RTVHVTTVPGL-DATGVRDGLAAHVP-------VTDRPGDA-AAVVFVLDALSVLGRDEL 84
Query 94 VLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDR--LAARASRYARVPWVGAAAAPEL 151
LD H + V+ + D R+ RD L A + RYA + A
Sbjct 85 SALDVVGAHVERVL-FTTPTDAPWALRE-----RDEALLRAHSPRYADARILNGA----- 133
Query 152 GEPYLDDLVAAIQKQLADP--AVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALR 209
+L A++ L P + RN RA S + R A+S RA A
Sbjct 134 ------ELHGAVRAALDAPPGVIVERNRRRAALSLVEETCRMITTTAESV--RADDIAPL 185
Query 210 QQRRTVLRQGRQ-SKSEHTIALRAQIQHARVKLSYFA----RNRCSLLRVELQEHVAGLS 264
+QRRT L R ++E + +R+ +Q AR++L + R SL+R E+ V
Sbjct 186 RQRRTRLTSNRGGDRAELSALVRSDVQRARIELVHTVGVRIRELSSLVRSEIDRAV---- 241
Query 265 RKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPP 324
R+++A + + AEV A D+ G+ PP P+ + +V AP
Sbjct 242 RRELATYPDRFAQLADALTAEVDTVAGHRFDDLVVRAGL-THPPARPPEPSEV-SVSAPE 299
Query 325 LTSRRLEIRLTTLLGAGFGLGIA-LTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNA 383
R +E R+ ++GA G+G+ L ++ L + P L + + + +G A W+ +
Sbjct 300 PRHRGVEDRMMVIVGASAGVGLGRLAVAPL--SMVPALDIATIPVTLTLGGAAAWWLARS 357
Query 384 RALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVS 443
R L DR + +W + T LR+ +EQ V R++ E + + A A V +++
Sbjct 358 RRHLADRAHLRQWAADATTGLRAQLEQRVLARLLETEAAVGQRVLADGRAATAAVDAEIA 417
Query 444 IIDGELREHAVAAARAAAL 462
+D E+R VAA R+ L
Sbjct 418 AVDAEIRR--VAAHRSGRL 434
>gi|333921786|ref|YP_004495367.1| hypothetical protein AS9A_4133 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484007|gb|AEF42567.1| hypothetical protein AS9A_4133 [Amycolicicoccus subflavus DQS3-9A1]
Length=487
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 126/456 (28%), Positives = 185/456 (41%), Gaps = 51/456 (11%)
Query 37 VLVTGPWLAGVSGVRAAL---AERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDC 93
V++TG AG S + AL A R P T E G G VV V AA ++ ++
Sbjct 4 VVITGRENAGKSALVDALNAVAPRGPMSFREWTEEDGDGVQLPVVVMVFDAAGSMGSTEL 63
Query 94 VLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARV-------PWVGAA 146
L + D VV ++K D+H+ WR V + LA R+ V P V A+
Sbjct 64 AELRRLNANVDRVVFAITKTDMHQNWRQVRDRDAQLLAIHTPRFTAVEIHPIATPLVQAS 123
Query 147 ---------AAPELGEPY-LDDLVAAIQKQLADPAVAR--RNMLRAWE-SRLLMVAR--- 190
AA L E ++ L AI+ +L P RN+L W + L AR
Sbjct 124 NDRRDTDPDAARALAESAGIEALYEAIRAELPAPGADYVARNLL--WSVTGALQEARAHR 181
Query 191 -RFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRC 249
R + Q+ ++ L + R +LR +SE +LR+ +Q ARV+L +
Sbjct 182 QRLSREVQN---NPEINRLHRVRAELLRNRGAGRSEELGSLRSDVQLARVELGHDVAEWA 238
Query 250 SLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADV---AQLLGVPVQ 306
+ + L I + A R V+ ++E + V D A+ + P
Sbjct 239 RATSAATRAEIDALGGSAIESYPARVRSLVRAGLSE-NDQRVGDRIDALWSARSISQPAA 297
Query 307 PPVLENLPA-------VLPTVVAPPLTSRR-LEIRLTTLLGAGFGLGIALTLSRLVAG-- 356
P E V + A P RR E + L+GA G+G L RLV
Sbjct 298 EPAAEESDTSDAASSRVASSGAALPAAPRRGAEDYVMVLIGASVGVG----LGRLVVSPL 353
Query 357 -LTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATR 415
L P L + + +G AV W++ R + R + WT E R +E+ V TR
Sbjct 354 SLVPVLEILTIPLTLLLGGAVAVWMMRIRRQIAARTRLREWTTEQLLDARGKMERSVGTR 413
Query 416 VVAVETLLSTAISERDDAENARVADQVSIIDGELRE 451
+V E L+ AI R D + A V I+ ELRE
Sbjct 414 IVNAEQQLAAAIGGRFDEKVAATDSDVRQIEVELRE 449
>gi|226304577|ref|YP_002764535.1| hypothetical protein RER_10880 [Rhodococcus erythropolis PR4]
gi|226183692|dbj|BAH31796.1| hypothetical protein RER_10880 [Rhodococcus erythropolis PR4]
Length=446
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 104/389 (27%), Positives = 167/389 (43%), Gaps = 35/389 (8%)
Query 92 DCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGAAAAPEL 151
D +LLD AAE VV ++++DV+R W+ V + + LA+ + +A+ P V A E
Sbjct 87 DLLLLDDAAESGIPVVVALTRVDVYRDWQAVRRRDAEILASHCTAFAQAPVVPIAPGQE- 145
Query 152 GEPYLDDLVAAIQKQLAD-PAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQ 210
LVA + + + A + + A R++ + R D+ S LR
Sbjct 146 -----QSLVAVVSRAAREREAGGSDSGVIAQTRRMIEIEIRNLRDSVSGAE------LRA 194
Query 211 QRRTVL--RQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDI 268
+R +L R GR + E + +R+++Q AR LS + V SR ++
Sbjct 195 ERSQLLADRDGR--RGERLVQVRSRLQRARGDLSQQIAEATRATVAGARAWVDAASRAEL 252
Query 269 ARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSR 328
+ V V + A+A +VA G P + E PP R
Sbjct 253 GSVPTRLQHEVDHHT-RVFDAAMAAAVEVAGTTGYMPSPRIPEG----------PPRRQR 301
Query 329 RLEIRLTTLLGAGFGLG---IALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARA 385
E R+T L+GA GLG IA+T ++ P L + + + +G A W+ R
Sbjct 302 GNEDRVTILVGASAGLGLGRIAVTPLEMI----PALEFASIPVTLVLGGAAAWWLARTRG 357
Query 386 LLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSII 445
L DR W E +++R+ EQ V + ++ E L AI + A ++ I
Sbjct 358 LTADRAYSRSWIVESMSTVRAQWEQRVQSVLLEAEADLGAAIMAESREQVASAQARIVEI 417
Query 446 DGELREHAVAAARAAALRDREMPAVRAAL 474
DGELRE A A + A +R++ + AA
Sbjct 418 DGELRELAAARSGQLASCERDLAVLNAAY 446
>gi|291301201|ref|YP_003512479.1| hypothetical protein Snas_3729 [Stackebrandtia nassauensis DSM
44728]
gi|290570421|gb|ADD43386.1| hypothetical protein Snas_3729 [Stackebrandtia nassauensis DSM
44728]
Length=626
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/430 (21%), Positives = 172/430 (40%), Gaps = 68/430 (15%)
Query 76 VAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARAS 135
A++FVV +++ ++ + L A++ + V+ ++K D + GW+ + + L A
Sbjct 182 TALLFVVDSSSPFSKPELDFLIEASKRVNFVMFALTKTDAYPGWQRIRDDDIALLQTHAP 241
Query 136 RYARVPWVGAAA---------APELGEPYLDDL-VAAIQKQLAD-----PAVARRNMLRA 180
R+A P+ ++ P+ + +D+ +AA+Q L + + N+LR+
Sbjct 242 RFATAPFFPVSSRLAEMALTMPPDAAKTLIDESRIAALQHALIKLGSRGNILQQANLLRS 301
Query 181 WESRLLMVARRFDGDAQSAGRRARV-DALRQQRRTVLRQGRQSKSEHTIALRAQIQHARV 239
S + + + ++ +V + L++ ++ V++ R + +ALR +IQ ARV
Sbjct 302 LRSEFIRLDLGVMENLKTLSPDPQVTEKLKEDKKRVMKLKRGQNKQSNMALRTEIQRARV 361
Query 240 KLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQ 299
+ + R + L+ EL + + RG ++ + EV A ++Q
Sbjct 362 EATSRLRTYVTKLQDEL-----------LNKVEKANRGEIKNMPTEVDRALHALSVRLSQ 410
Query 300 LLGVPVQPPVLENLPAVLPTVVAPPLTSR-------------RLEIRLTTLLGAGFGLGI 346
L + L + P + R R E + G
Sbjct 411 ELDYRFKVLADRALSQMFPPNELAQVIGRINAQLRMQSGSKPRRETSGDNAMLVMSSAGT 470
Query 347 ALTLSRLVA------------GLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVD 394
A+ R+V + LAASG V IGLA A+++ R + DR
Sbjct 471 AMMAGRVVTMGAAGAGIAATGVASVALAASG----VGIGLAAAAFMMYRRKVSQDRQQAQ 526
Query 395 RWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAV 454
RW EV R+ +++ + R +E + A+ DDA R G+ + +
Sbjct 527 RWVREVLQETRASLQEEIQYRFTEIEYTFNLAL---DDALEKR---------GDQLDKQI 574
Query 455 AAARAAALRD 464
AAA A +D
Sbjct 575 AAAEKALKQD 584
>gi|229494603|ref|ZP_04388366.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229318965|gb|EEN84823.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=446
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 101/378 (27%), Positives = 159/378 (43%), Gaps = 39/378 (10%)
Query 92 DCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGAAAAPEL 151
D +LL AA VV ++++DV+R W+ V + + LA+ + +A+ P V A E
Sbjct 87 DLLLLGDAAASGTPVVVALTRVDVYRDWQAVRRRDAEILASHCTAFAQAPVVPIAPGQE- 145
Query 152 GEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDA--LR 209
LVA + + AR +S ++ RR + + R V LR
Sbjct 146 -----QSLVAVVSR------AAREREAGGSDSGVIAQTRRMI-EMEIRNLRDSVPGAELR 193
Query 210 QQRRTVL--RQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKD 267
+R +L R GR + E + +R+++Q AR LS + V SR +
Sbjct 194 AERSQLLTDRDGR--RGERLVQVRSRLQRARGDLSQQIAEATRATVAGARAWVDTASRAE 251
Query 268 IARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTS 327
+ + V V + A+A + A G P + E LP
Sbjct 252 LGSVPTRLQHEVDHHT-RVFDAAMAAAVESAGTNGYMPSPRIPEGLPG----------RQ 300
Query 328 RRLEIRLTTLLGAGFGLG---IALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNAR 384
R E R+T L+GA GLG IA+T ++ P L + + + +G A W+ R
Sbjct 301 RGNEDRVTILVGASAGLGLGRIAVTPLEMI----PALEFASIPVTLILGGAAAWWLARTR 356
Query 385 ALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSI 444
L DR W E +++R+ EQ V + ++ E L AI + A ++
Sbjct 357 GLTADRAYSRSWIVESMSAVRAQWEQRVQSVLLEAEADLGAAIMAESREQLASAQARIVE 416
Query 445 IDGELREHAVAAARAAAL 462
IDGELRE +AAAR+ L
Sbjct 417 IDGELRE--LAAARSGQL 432
>gi|296395209|ref|YP_003660093.1| hypothetical protein Srot_2831 [Segniliparus rotundus DSM 44985]
gi|296182356|gb|ADG99262.1| hypothetical protein Srot_2831 [Segniliparus rotundus DSM 44985]
Length=513
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 119/491 (25%), Positives = 190/491 (39%), Gaps = 114/491 (23%)
Query 7 DDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVET 66
D PA L+ + P L L PV + +V+V P +G + + AALAE P E
Sbjct 11 DWPARARSLLRRLQPDLV-LESPVPATQPIVVVGAPG-SGKTELIAALAEEAPDVAVREV 68
Query 67 AELGPGDAPVAVVFVVSAATA---------LTESDCVLLDTAAEHTDAVVAVVSKIDVHR 117
E A +A ++ A A + +D ++ A +V ++KID +
Sbjct 69 NE-----ADLAAFALIGAKAALVVLDAAAPVDATDLAVVRAVAGRVHHIVFAITKIDAYE 123
Query 118 GWRDVLTSNRDRLAARASRYARV-----------------------PWVGAAAAPELGEP 154
WR D L R+A W A+ EL
Sbjct 124 DWRGTRAKAADALEDLGPRFASAVLHPVSARLHHLAMNAHDPLQVRQWSAASGVRELAA- 182
Query 155 YLDDLVAAIQKQLADPAV-ARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRR 213
DL + I+K DP + R+N LR +++L R A+ +AL Q+ R
Sbjct 183 ---DL-SRIEK--LDPELLTRQNWLRYVDAQLSEAGMRSQDPAEE-------EALSQKHR 229
Query 214 TVLRQGRQS-------KSEHTIALRAQIQHARV----KLSYFARNRCSLLR--------- 253
VLR+ ++E LR Q+Q ARV +L+ AR+ + R
Sbjct 230 QVLRERTHEHRNLDAGRAERRDMLRNQLQLARVDLAVELNSLARSTSAQARDFVSKASGR 289
Query 254 -------------VELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQL 300
+EL + + GLS++ IA ++ GR A L +A L
Sbjct 290 QLKNLVEVVKPKILELDQRMVGLSQERIAAISSAVLGR-------------ADLRSIALL 336
Query 301 LGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGA--GFGLGIALTLSRLVAGLT 358
+ PP E+L P + ++ + +LGA GFGLG ++ +
Sbjct 337 SQPALHPP--EHLDP-------PKFGAWGMDDFIMVILGASAGFGLG---RIAVVPFQHA 384
Query 359 PGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVA 418
PG++A M A+GLA+ +V+ R L R W E + R +EQ + ++
Sbjct 385 PGISALSMPLAAAVGLAIAIAIVSVRRLSSGRQKAVAWVSEAVSYRRGQLEQTITAGLLH 444
Query 419 VETLLSTAISE 429
ET L+ + +
Sbjct 445 AETELTQVLDD 455
>gi|262204295|ref|YP_003275503.1| hypothetical protein Gbro_4477 [Gordonia bronchialis DSM 43247]
gi|262087642|gb|ACY23610.1| hypothetical protein Gbro_4477 [Gordonia bronchialis DSM 43247]
Length=529
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 120/495 (25%), Positives = 193/495 (39%), Gaps = 56/495 (11%)
Query 10 AGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERLPQRRFVETAEL 69
A D+L+A +A L G I VLVTG GVS + A P V+ ++
Sbjct 4 ADADDLLARVAD-LTGFDATTIAVGTSVLVTGTPGVGVSSLVDACRSLAPDLHVVDAEDV 62
Query 70 GPGDAPVAV---VFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSN 126
A+ V VV ++++ E + +LD V V +KID W VL ++
Sbjct 63 AQQHISTAIGVAVLVVDPSSSVGEEERRILDDLRATHGTVGLVCAKIDAFWQWPRVLRAH 122
Query 127 RDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRN-----MLRAW 181
R L + AA + + E + LV ++ ++ P R + R
Sbjct 123 RHTLDPHDAVALFAVSSIAALSGAVDESGVGALVEWLRSEVEVPDAVRTSRARIAAARGS 182
Query 182 ESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKL 241
RLL D +AG +AL ++RR ++ + +++ A+RA + R +
Sbjct 183 VERLLYDLDNHDTLTGAAGAD-DTEALMRRRRVLVSGRDRGRTDRLAAVRAGLGRVRAES 241
Query 242 SYFARNRCSLLRV-------ELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHL 294
S + + + V+GL R + AA G ++E + EV A+ L
Sbjct 242 SVQMQTGLRTIATTAAGSDGDQTVDVSGL-RALLDDLAATVSGAIEERIEEVRAAALVDL 300
Query 295 ADVAQL------------LGVPVQPPVLENLP--------AVLPTVVAPPLTSRRLEIRL 334
+ G P +P E+ P V P V AP R E L
Sbjct 301 NESEHAGPTGSDHAGTDRAGDPAEPDPPESDPIGAEPWALDVGP-VRAPTGGRRGAEDAL 359
Query 335 TTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVA---GVAIGLAVTAWVVNARALLHDRV 391
L+GA GLG+ RL+A L + A G +A +A+G+ WV+ R R+
Sbjct 360 MLLIGASTGLGVG----RLLAALMASVHAVGWIAMPLTLALGIGAAVWVIRMRHRTTARM 415
Query 392 VVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELRE 451
W E +R+ + + RV E+ ++ I+ D V +V+ +D +R
Sbjct 416 QARGWVTETLGEVRARADHQIGVRVAGAESRIAGQIARSYDRRARLVTAEVAALDDRVR- 474
Query 452 HAVAAARAAALRDRE 466
ALRD E
Sbjct 475 ---------ALRDDE 480
>gi|343924440|ref|ZP_08763989.1| hypothetical protein GOALK_016_00380 [Gordonia alkanivorans NBRC
16433]
gi|343765584|dbj|GAA10915.1| hypothetical protein GOALK_016_00380 [Gordonia alkanivorans NBRC
16433]
Length=459
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/395 (25%), Positives = 160/395 (41%), Gaps = 32/395 (8%)
Query 72 GDAPVAVVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLA 131
G+ P + VV ++++ + + L++ V V +KID W ++ ++R L
Sbjct 25 GNQPGVALVVVDPSSSVGDEELHLVERVRGTVGTVALVCTKIDAFWEWPRIVRAHRKTL- 83
Query 132 ARASRYARVPWVGAAAAPELG----EPYLDDLVAAIQKQLADPAVARRNMLRAWE----- 182
+ +P G +AA LG E +D LV I++ L PA R R
Sbjct 84 ---DPFGTMPLFGVSAAASLGGAVEESGVDALVGWIREALEAPAAVRVERARLAAGAGAV 140
Query 183 SRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLS 242
LL S +D L RR ++ + + + A+RA + AR + S
Sbjct 141 EHLLDDTDAGTDTDTSGA----LDELMSTRRRLVSSRDRGRVDRLAAVRAGLTRARAQSS 196
Query 243 YFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVA--QL 300
++R L + + G A ++ R R ++ + A + +VA L
Sbjct 197 AELQSRVRGLAALVADDAPGTG----AEHQSWLRSRWADLADGIRRDADERIDEVAATSL 252
Query 301 LGVPVQPPVLENLPAV-LP-TVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLT 358
+G+ +P E P LP E L ++GA GLG+ + +A +
Sbjct 253 VGLDPEPSPQEPWPETPLPADGPGNRRRRGGAEDALLVIIGASTGLGVGRLVVAPMASVQ 312
Query 359 PGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASL---RSVVEQLVATR 415
L M + +G+ V WV+ R DR DR TG T L RS ++ + R
Sbjct 313 T-LQWISMPLTLLLGIGVAVWVIRVRRGALDR--ADR-TGRSTERLTVARSALDHQLGLR 368
Query 416 VVAVETLLSTAISERDDAENARVADQVSIIDGELR 450
A ET ++ I+ + R ++QV+ ID E+R
Sbjct 369 FAAAETRIAGQIARAHERRARRTSEQVAQIDDEIR 403
>gi|317509185|ref|ZP_07966809.1| hypothetical protein HMPREF9336_03181 [Segniliparus rugosus ATCC
BAA-974]
gi|316252542|gb|EFV11988.1| hypothetical protein HMPREF9336_03181 [Segniliparus rugosus ATCC
BAA-974]
Length=532
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 107/471 (23%), Positives = 187/471 (40%), Gaps = 58/471 (12%)
Query 37 VLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGD-APVAVV------FVVSAATALT 89
+ V G +G + + AAL E P +E E+ D A A+V V+ A +
Sbjct 57 IAVVGAAGSGKTELIAALREESPD---IEVREVNEADLASFALVEAKAALVVLDAGAPVD 113
Query 90 ESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARV--------- 140
E+D ++ +V V+KID + WR L + L R+A V
Sbjct 114 ETDLAVVKAVTGRVHHIVFAVTKIDAYEDWRGTLARDAQALEDLGPRFASVLLHPVSARL 173
Query 141 --------------PWVGAAAAPELGEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLL 186
W A+ EL L +++ A R+N LR + +L
Sbjct 174 HHLAMNTHDPLQVRQWSAASGLRELAADLLRIDSVSVE------ARTRQNWLRYLDRQLS 227
Query 187 MVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQS-------KSEHTIALRAQIQHARV 239
R A+ +AL + R VLR+ Q ++E LR+Q+Q ARV
Sbjct 228 EAGMRAQDPAEE-------EALSAEHRRVLRERTQEHRNQDAGRTERRDMLRSQLQLARV 280
Query 240 KLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQ 299
L+ + +++E S + + + ++ E+ +V E A ++ ++
Sbjct 281 DLAVELNSLARSTSAQVRESATKASGRQLKNLIEVVKPKILELDQKVVESCQARISAISS 340
Query 300 -LLG-VPVQPPVLENLPAVLP--TVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVA 355
+LG ++ L P + P + P S +E + LLG G+G+ ++ L
Sbjct 341 AVLGRTDLRAISLFAQPELRPPEHLDPPKFGSWGIEDFVVVLLGVSAGVGLG-RIAVLPF 399
Query 356 GLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATR 415
PGLAA + +GLA+ +V+ R L R W E A R +EQ +
Sbjct 400 QRVPGLAAWSVPLVAVLGLAIAMAIVSIRRLSSGRQQAAAWVAEAVAYRRGQLEQTITAG 459
Query 416 VVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDRE 466
++ ET L+ + + + R ++ ++ + ++ A AR + R RE
Sbjct 460 LLHAETELTQVLDDVFARQRIRSEQRMDELEQQAKDIAERLARLRSQRQRE 510
>gi|312199524|ref|YP_004019585.1| GTP-binding protein HSR1-related protein [Frankia sp. EuI1c]
gi|311230860|gb|ADP83715.1| GTP-binding protein HSR1-related protein [Frankia sp. EuI1c]
Length=654
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/240 (27%), Positives = 97/240 (41%), Gaps = 49/240 (20%)
Query 78 VVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRLAARASRY 137
++FVVS + LT S+ L E T V+ V+++ID + WR+VL N++ + A
Sbjct 217 LLFVVSGQSELTASEHGFLRQLRERTSEVLFVLAQIDKYPDWRNVLARNQELIRDHAPAL 276
Query 138 ARVPWVGAAA-----APELGEPYLDD-------------LVAAIQKQLADPA--VARRNM 177
A PW ++ A E D L+AA+ +AD A + RN
Sbjct 277 ADAPWFPVSSRFKIDADRFAERGRADRAATLTERSGFVPLMAALTDTVADRADRIRMRNT 336
Query 178 LRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHA 237
L A L D AG+R R+ +L H AL A+I
Sbjct 337 LHATGQVL---------DRLEAGQRTRLRSL----------------AHDPALLAEINDR 371
Query 238 RVKLSYFARNRCSLLRVELQEHVAGL---SRKDIARFAAYTRGRVQEVVAEVGEGAVAHL 294
R +L+ AR + R L E GL +R +++R A + E + G +A L
Sbjct 372 RTRLAA-AREETAWWRAHLAERFQGLDNTARLELSRLIADLQAEADERIVAAGTEYLAQL 430
>gi|54027454|ref|YP_121696.1| hypothetical protein nfa54800 [Nocardia farcinica IFM 10152]
gi|54018962|dbj|BAD60332.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=494
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/237 (27%), Positives = 100/237 (43%), Gaps = 23/237 (9%)
Query 209 RQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDI 268
R +R T+L ++ T ALR Q+ ARV L R L + V L+R ++
Sbjct 206 RAERATLLAARDGGRASATAALRGQLHLARVDLMTETGARVRTLHATARAEVDRLARGEL 265
Query 269 ARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLG------------VPVQPPVLENLPAV 316
+ + V ++ A + + +A++A + P P +
Sbjct 266 TGYPRRLQQSVTDLTAGLDQDIDRRIAELAHGVDAAAAPVAPDASRAPAFAPGAHRAAEL 325
Query 317 LPTVVAP-----PLTSRR---LEIRLTTLLGAGFGLGIA-LTLSRLVAGLTPGLAASGMV 367
P V P P R +E L LGA G G+ L +S L L P L + +
Sbjct 326 PPRRVDPAPRVGPDPEPRQAGVEDHLMVALGASAGAGLGRLLVSPL--SLVPALDVASIP 383
Query 368 AGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLS 424
+A+G WVV AR + DR + +W + ++++ +EQ VAT +VA ET L+
Sbjct 384 VTLALGALAAWWVVRARRQVADRAHLRQWVADALVNVKAQLEQRVATALVAAETALA 440
>gi|343925669|ref|ZP_08765186.1| hypothetical protein GOALK_048_00740 [Gordonia alkanivorans NBRC
16433]
gi|343764459|dbj|GAA12112.1| hypothetical protein GOALK_048_00740 [Gordonia alkanivorans NBRC
16433]
Length=611
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/68 (36%), Positives = 37/68 (55%), Gaps = 1/68 (1%)
Query 78 VVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKID-VHRGWRDVLTSNRDRLAARASR 136
+V V A L+ + L + +E +VV VV+K D V R WR ++ NR + A A R
Sbjct 193 LVMVCDATAPLSAPELAFLSSVSEEVASVVLVVTKTDLVMRQWRTIVAENRKLIGANAPR 252
Query 137 YARVPWVG 144
+A +P +G
Sbjct 253 FAHIPIIG 260
>gi|262201142|ref|YP_003272350.1| hypothetical protein Gbro_1149 [Gordonia bronchialis DSM 43247]
gi|262084489|gb|ACY20457.1| hypothetical protein Gbro_1149 [Gordonia bronchialis DSM 43247]
Length=602
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/118 (32%), Positives = 56/118 (48%), Gaps = 14/118 (11%)
Query 41 GPWLAGVSGVRAALAERL-PQRRFVETAELGPGDAP-----------VAVVFVVSAATA- 87
GP V+G R A+A L P V+T +G A V+ +V ATA
Sbjct 137 GPVGLPVTGARVAIASTLLPDVVIVDTPGVGSLVAEHVQAAVSAARGAGVLLMVCDATAP 196
Query 88 LTESDCVLLDTAAEHTDAVVAVVSKID-VHRGWRDVLTSNRDRLAARASRYARVPWVG 144
++ + L + +E +VV V+KID V R WR ++ NR + A R+A +P +G
Sbjct 197 ISAPELAFLGSISEEISSVVLAVTKIDLVMRQWRTIVAENRKLITTHAPRFAHLPIIG 254
>gi|226364948|ref|YP_002782730.1| hypothetical protein ROP_55380 [Rhodococcus opacus B4]
gi|226243437|dbj|BAH53785.1| hypothetical protein [Rhodococcus opacus B4]
Length=568
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/124 (35%), Positives = 56/124 (46%), Gaps = 15/124 (12%)
Query 36 VVLVTGPWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDCVL 95
+VLV P +G + RAA L V TA+ AV+FV A+ TE + L
Sbjct 109 LVLVDAPGFSGHAPARAADTLAL-----VPTAD--------AVLFVSDASQEYTEPEVAL 155
Query 96 LDTAAEHTDAVVAVVSKIDVHRGWRDVLTSNRDRL--AARASRYARVPWVGAAAAPELGE 153
L + V+ VV+KID + W D+ +NR L A A V V A A E GE
Sbjct 156 LTQVYKLCPMVICVVNKIDFYPRWADIQKANRTHLQNADLALPLLPVSAVMHADALESGE 215
Query 154 PYLD 157
LD
Sbjct 216 DALD 219
>gi|213965045|ref|ZP_03393244.1| hypothetical protein CORAM0001_0189 [Corynebacterium amycolatum
SK46]
gi|213952581|gb|EEB63964.1| hypothetical protein CORAM0001_0189 [Corynebacterium amycolatum
SK46]
Length=582
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 100/420 (24%), Positives = 157/420 (38%), Gaps = 83/420 (19%)
Query 78 VVFVVSAATALTESDCVLLDTAAEHTDAVVAVVSKIDVH-RGWRDVLTSNRDRLAARASR 136
VVFV+ A T +TE + L A T + ++K D + GWR++ R ++
Sbjct 147 VVFVLEATTTITEPELATLKEIAASTPGLAVAITKKDKNLLGWREIERVTRQQIQQHLGE 206
Query 137 Y-ARVPWVGAAAAPEL----GEPYLDDLV-----------------AAIQKQLADPAVAR 174
+ VP V + L G P+L D V + +QK P +
Sbjct 207 LVSEVPIVSVSPLRYLSALNGNPFLADEVINDSGIPRLQEAIVEARSRLQKNAYTPVM-- 264
Query 175 RNMLRAWESRLLMVARRFDGDAQS-----AGRRARVDALRQQRR---TVLRQG-RQSKSE 225
R L S + + D+ + ++ ++ L RR +L G Q++SE
Sbjct 265 RQALVLLNSEYAELESKISADSTAMLSRLEEKKVELEHLTSDRRRGQQLLTSGLSQARSE 324
Query 226 HTIALRAQIQHARVKL-SYFARNRCSLLR-------VELQEHVAGLSRKDIARFAAYTRG 277
Q+ R K SYFA +R +++ ++ L I F A +R
Sbjct 325 AVSMAETQLVEIREKWHSYFASTPPRYIRAHRDAVFFQIESELSELFEDSIRYFMARSR- 383
Query 278 RVQEVVAEVGEG------AVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSRRLE 331
EV V +G + L +VA + V +P EN A VV P L S
Sbjct 384 ---EVYVGVTDGVADWHCVIDALNEVATGISVSNKPES-ENSVA---KVVDPSLVS---- 432
Query 332 IRLTTLLGAGFGLGIALTLSRLVAGLTPGLAA----SG-----MVAGVAIGLAVTAWVVN 382
LT + GFGL L G PG+ A SG VA + L V +
Sbjct 433 --LT--IAGGFGLTHVL-------GFVPGIGAAIIGSGGTVLPFVAMAGLWLGVNVY--- 478
Query 383 ARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQV 442
R+ RV + +W +V +R + Q + T + LL ++ + R Q+
Sbjct 479 HRSSKTGRVELSKWLDQVILQVRRQLNQGIETVYNELRPLLINQFNDNLELRIRRTKHQI 538
Lambda K H
0.320 0.133 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1053329043408
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40