BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0212c
Length=323
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607353|ref|NP_214726.1| transcriptional regulatory protein ... 651 0.0
gi|340625249|ref|YP_004743701.1| putative transcriptional regula... 650 0.0
gi|289441588|ref|ZP_06431332.1| nicotinamide-nucleotide adenylyl... 650 0.0
gi|15839592|ref|NP_334629.1| transcriptional regulator, putative... 649 0.0
gi|289572792|ref|ZP_06453019.1| asnC-family transcriptional regu... 648 0.0
gi|167968790|ref|ZP_02551067.1| transcriptional regulatory prote... 644 0.0
gi|183982967|ref|YP_001851258.1| ATPase/kinase, NadR [Mycobacter... 437 1e-120
gi|240168039|ref|ZP_04746698.1| putative transcriptional regulat... 423 2e-116
gi|298251241|ref|ZP_06975044.1| cytidyltransferase-related domai... 285 9e-75
gi|183222060|ref|YP_001840056.1| NadR family transcriptional reg... 218 1e-54
gi|83859956|ref|ZP_00953476.1| possible transcriptional regulato... 212 6e-53
gi|302533643|ref|ZP_07285985.1| nicotinamide-nucleotide adenylyl... 187 1e-45
gi|328881448|emb|CCA54687.1| Nicotinamide-nucleotide adenylyltra... 181 1e-43
gi|291301951|ref|YP_003513229.1| cytidyltransferase-related doma... 177 3e-42
gi|323358875|ref|YP_004225271.1| nicotinamide mononucleotide ade... 176 5e-42
gi|254385861|ref|ZP_05001180.1| transcriptional regulatory prote... 174 1e-41
gi|182439524|ref|YP_001827243.1| putative NadR-like transcriptio... 174 2e-41
gi|326780188|ref|ZP_08239453.1| cytidyltransferase-related domai... 174 2e-41
gi|168702604|ref|ZP_02734881.1| ATPase/kinase involved in NAD me... 174 2e-41
gi|297195215|ref|ZP_06912613.1| transcriptional regulatory prote... 174 2e-41
gi|296129290|ref|YP_003636540.1| putative NadR-like transcriptio... 172 8e-41
gi|239986725|ref|ZP_04707389.1| putative NadR-like transcription... 170 3e-40
gi|312139091|ref|YP_004006427.1| cytidylyltransferase [Rhodococc... 168 8e-40
gi|325673612|ref|ZP_08153303.1| NadR family transcriptional regu... 165 9e-39
gi|332669989|ref|YP_004452997.1| putative NadR-like transcriptio... 165 9e-39
gi|320011604|gb|ADW06454.1| cytidyltransferase-related domain pr... 162 8e-38
gi|190572493|ref|YP_001970338.1| putative transcriptional regula... 159 8e-37
gi|310765158|gb|ADP10108.1| nicotinamide-nucleotide adenylyltran... 154 2e-35
gi|269796502|ref|YP_003315957.1| cytidyltransferase-related enzy... 154 2e-35
gi|259907345|ref|YP_002647701.1| nicotinamide-nucleotide adenyly... 152 8e-35
gi|182413991|ref|YP_001819057.1| transcriptional regulatory prot... 152 9e-35
gi|171909588|ref|ZP_02925058.1| ATPase/kinase involved in NAD me... 150 3e-34
gi|253988003|ref|YP_003039359.1| nicotinamide-nucleotide adenyly... 147 3e-33
gi|292489441|ref|YP_003532328.1| nadAB transcriptional regulator... 146 5e-33
gi|238794797|ref|ZP_04638399.1| Transcriptional regulator nadR [... 146 6e-33
gi|188532821|ref|YP_001906618.1| nicotinamide-nucleotide adenyly... 145 9e-33
gi|83649599|ref|YP_438034.1| NAD metabolism ATPase/kinase [Hahel... 145 9e-33
gi|225020513|ref|ZP_03709705.1| hypothetical protein CORMATOL_00... 144 1e-32
gi|226311115|ref|YP_002771009.1| nicotinamide mononucleotide ade... 144 2e-32
gi|157368913|ref|YP_001476902.1| nicotinamide-nucleotide adenyly... 144 3e-32
gi|332160215|ref|YP_004296792.1| nicotinamide-nucleotide adenyly... 143 3e-32
gi|261819874|ref|YP_003257980.1| nicotinamide-nucleotide adenyly... 143 4e-32
gi|238786631|ref|ZP_04630432.1| Transcriptional regulator nadR [... 143 5e-32
gi|227114643|ref|ZP_03828299.1| nicotinamide-nucleotide adenylyl... 142 5e-32
gi|253686850|ref|YP_003016040.1| transcriptional regulator, XRE ... 142 5e-32
gi|227326500|ref|ZP_03830524.1| nicotinamide-nucleotide adenylyl... 142 5e-32
gi|238752646|ref|ZP_04614118.1| Transcriptional regulator nadR [... 142 6e-32
gi|238758574|ref|ZP_04619750.1| Transcriptional regulator nadR [... 142 6e-32
gi|300715204|ref|YP_003740007.1| transcriptional regulator NadR ... 142 9e-32
gi|344205755|ref|YP_004790896.1| putative transcriptional regula... 141 1e-31
>gi|15607353|ref|NP_214726.1| transcriptional regulatory protein NadR [Mycobacterium tuberculosis
H37Rv]
gi|31791390|ref|NP_853883.1| transcriptional regulatory protein NadR [Mycobacterium bovis
AF2122/97]
gi|121636124|ref|YP_976347.1| transcriptional regulatory protein NadR [Mycobacterium bovis
BCG str. Pasteur 1173P2]
66 more sequence titles
Length=323
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/323 (99%), Positives = 323/323 (100%), Gaps = 0/323 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR
Sbjct 1 MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH
Sbjct 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW
Sbjct 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
Query 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA
Sbjct 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
Query 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI
Sbjct 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
Query 301 TGGWEERLSVSLRAVEELVRARR 323
TGGWEERLSVSLRAVEELVRARR
Sbjct 301 TGGWEERLSVSLRAVEELVRARR 323
>gi|340625249|ref|YP_004743701.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|340003439|emb|CCC42559.1| putative transcriptional regulatory protein NADR (probably ASNC-family)
[Mycobacterium canettii CIPT 140010059]
Length=323
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/323 (99%), Positives = 323/323 (100%), Gaps = 0/323 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR
Sbjct 1 MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQ+LGARFVAVDH
Sbjct 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQILGARFVAVDH 120
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW
Sbjct 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
Query 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA
Sbjct 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
Query 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI
Sbjct 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
Query 301 TGGWEERLSVSLRAVEELVRARR 323
TGGWEERLSVSLRAVEELVRARR
Sbjct 301 TGGWEERLSVSLRAVEELVRARR 323
>gi|289441588|ref|ZP_06431332.1| nicotinamide-nucleotide adenylyltransferase [Mycobacterium tuberculosis
T46]
gi|289414507|gb|EFD11747.1| nicotinamide-nucleotide adenylyltransferase [Mycobacterium tuberculosis
T46]
Length=323
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/323 (99%), Positives = 322/323 (99%), Gaps = 0/323 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR
Sbjct 1 MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH
Sbjct 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW
Sbjct 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
Query 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
VPER KMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA
Sbjct 181 VPERTKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
Query 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI
Sbjct 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
Query 301 TGGWEERLSVSLRAVEELVRARR 323
TGGWEERLSVSLRAVEELVRARR
Sbjct 301 TGGWEERLSVSLRAVEELVRARR 323
>gi|15839592|ref|NP_334629.1| transcriptional regulator, putative [Mycobacterium tuberculosis
CDC1551]
gi|13879707|gb|AAK44443.1| transcriptional regulator, putative [Mycobacterium tuberculosis
CDC1551]
gi|323717201|gb|EGB26410.1| asnC-family transcriptional regulator nadR [Mycobacterium tuberculosis
CDC1551A]
Length=323
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/323 (99%), Positives = 322/323 (99%), Gaps = 0/323 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR
Sbjct 1 MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH
Sbjct 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW
Sbjct 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
Query 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
VPERAKMLRELNGGSLIGLEWAEIVRGQI SEEALARDADRVLICDTDPLATTVWAEFLA
Sbjct 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIVSEEALARDADRVLICDTDPLATTVWAEFLA 240
Query 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI
Sbjct 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
Query 301 TGGWEERLSVSLRAVEELVRARR 323
TGGWEERLSVSLRAVEELVRARR
Sbjct 301 TGGWEERLSVSLRAVEELVRARR 323
>gi|289572792|ref|ZP_06453019.1| asnC-family transcriptional regulator nadR [Mycobacterium tuberculosis
K85]
gi|339630291|ref|YP_004721933.1| AsnC family transcriptional regulator [Mycobacterium africanum
GM041182]
gi|289537223|gb|EFD41801.1| asnC-family transcriptional regulator nadR [Mycobacterium tuberculosis
K85]
gi|339329647|emb|CCC25285.1| putative transcriptional regulatory protein NADR (probably ASNC-family)
[Mycobacterium africanum GM041182]
Length=323
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/323 (99%), Positives = 322/323 (99%), Gaps = 0/323 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIP AQRVAWMRELFPFDR
Sbjct 1 MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPRAQRVAWMRELFPFDR 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH
Sbjct 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW
Sbjct 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
Query 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA
Sbjct 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
Query 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI
Sbjct 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
Query 301 TGGWEERLSVSLRAVEELVRARR 323
TGGWEERLSVSLRAVEELVRARR
Sbjct 301 TGGWEERLSVSLRAVEELVRARR 323
>gi|167968790|ref|ZP_02551067.1| transcriptional regulatory protein, asnC-family nadR [Mycobacterium
tuberculosis H37Ra]
Length=319
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 5 MVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVVHL 64
MVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVVHL
Sbjct 1 MVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVVHL 60
Query 65 ANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGRTV 124
ANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGRTV
Sbjct 61 ANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGRTV 120
Query 125 VPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPER 184
VPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPER
Sbjct 121 VPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPER 180
Query 185 AKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCP 244
AKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCP
Sbjct 181 AKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCP 240
Query 245 QELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGW 304
QELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGW
Sbjct 241 QELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGW 300
Query 305 EERLSVSLRAVEELVRARR 323
EERLSVSLRAVEELVRARR
Sbjct 301 EERLSVSLRAVEELVRARR 319
>gi|183982967|ref|YP_001851258.1| ATPase/kinase, NadR [Mycobacterium marinum M]
gi|183176293|gb|ACC41403.1| predicted ATPase/kinase, NadR [Mycobacterium marinum M]
Length=340
Score = 437 bits (1124), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 219/323 (68%), Positives = 253/323 (79%), Gaps = 2/323 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THGMVLG+F+PPHAGHVYL EFA RWVD+LTIV+ +PI G QR AWMRELFPFD
Sbjct 1 MTHGMVLGRFLPPHAGHVYLGEFASRWVDDLTIVISVQDEDPISGTQRFAWMRELFPFDH 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
VV +A ENPQ P EHP +WDIWK L+ VL RPDFVF +EPY D A+VLGARFVAVD
Sbjct 61 VVTVAVENPQHPPEHPSYWDIWKQRLERVLPRRPDFVFASEPYGEDLAKVLGARFVAVDQ 120
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
R +VPV+ T IRADPL +W++IPRCVRPAF KR+SIIGP STGKTTLA+A+AE+L T W
Sbjct 121 ARNIVPVSGTRIRADPLAYWRYIPRCVRPAFAKRISIIGPASTGKTTLARALAERLGTTW 180
Query 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
VPE A+ R LN SL +W EIVRGQIASEEALAR+ADR+LICDTDPLATTVWAEFL
Sbjct 181 VPEWARTPRGLNPDSL--EDWTEIVRGQIASEEALARNADRILICDTDPLATTVWAEFLL 238
Query 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVI 300
G P+EL ARRPYDLTLLT PD+P +AD PG RG FFARC+ AL+ A R FVV+
Sbjct 239 GHSPRELDCCARRPYDLTLLTKPDLPCNADQRGGRPGDRGEFFARCQHALKTARRPFVVV 298
Query 301 TGGWEERLSVSLRAVEELVRARR 323
+G W+ER S +LRA+EEL A R
Sbjct 299 SGDWDERTSTALRAIEELTPAVR 321
>gi|240168039|ref|ZP_04746698.1| putative transcriptional regulatory protein [Mycobacterium kansasii
ATCC 12478]
Length=328
Score = 423 bits (1087), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 213/324 (66%), Positives = 248/324 (77%), Gaps = 2/324 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THGMVLG+F+PPHAGHVYLCEFA RWVD+LTIV+ A +PI G+QR+AWMRELFPFDR
Sbjct 1 MTHGMVLGRFLPPHAGHVYLCEFAHRWVDDLTIVISVRARDPISGSQRLAWMRELFPFDR 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
V+ L+ EN + P E P + KASL+ VL RPDFVF +EPY AD AQ+LGARFV+VD
Sbjct 61 VIRLSMENVKHPSEQPPSRAVLKASLEKVLTVRPDFVFASEPYGADLAQILGARFVSVDQ 120
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
R VVPV+AT IR DP HWQHIPRCVRPAFVKRVSI+ + T LA+A+AEKL TKW
Sbjct 121 ARAVVPVSATCIRTDPFAHWQHIPRCVRPAFVKRVSILSADPTEAGALARALAEKLGTKW 180
Query 181 VPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
VPE + R+LNG S G++W E+VRGQIASEEALARDADRVLIC TDPLATTVWA+ L+
Sbjct 181 VPEWSGTPRDLNGDSPAGVDWTEVVRGQIASEEALARDADRVLICATDPLATTVWAQLLS 240
Query 241 GGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGT-FFARCEQALRAAGRSFVV 299
G CPQEL +LARR YDLTLL TPD D G P G F RCE+ALRA GR FVV
Sbjct 241 GSCPQELHELARRRYDLTLLMTPDSSSDT-AGVIYPLNAGVDFVGRCERALRAVGRPFVV 299
Query 300 ITGGWEERLSVSLRAVEELVRARR 323
+ GGWEER + +LRAVE+L + R
Sbjct 300 VNGGWEERTAAALRAVEKLTPSHR 323
>gi|298251241|ref|ZP_06975044.1| cytidyltransferase-related domain protein [Ktedonobacter racemifer
DSM 44963]
gi|297545833|gb|EFH79701.1| cytidyltransferase-related domain protein [Ktedonobacter racemifer
DSM 44963]
Length=321
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 146/323 (46%), Positives = 206/323 (64%), Gaps = 4/323 (1%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+T G+VLG+F+PPH GH YL +FA+ +VD+L +VVG+ + I G RVAW++E+ P+ R
Sbjct 1 MTTGLVLGRFIPPHLGHQYLIDFAQNYVDDLLLVVGTRPTDEIDGELRVAWIKEMAPWAR 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
V+ + +ENP+ P +W IW+ +L+ L PDF+F +E Y A++LG ++ V+H
Sbjct 61 VIRVNDENPEE--TDPRYWQIWEQTLRAALPYIPDFIFASEDYGWKLAELLGMEYIPVNH 118
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
RT+VP++AT +R++PL +WQ+IP VRP +VKRV I GPESTGK+TL +A +T +
Sbjct 119 PRTLVPISATRLRSNPLQYWQYIPPVVRPHYVKRVCIYGPESTGKSTLTIDLARHFQTVF 178
Query 181 VPERAKMLRELNGGSLIGLE-WAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFL 239
V E A+ L + G LE A I G AS +ALAR A+RVL CDTD L TTVW+ L
Sbjct 179 VEEYARGLLDFKNGRCDDLEDIARIAHGHRASTQALARQANRVLFCDTDLLTTTVWSNAL 238
Query 240 AGGCPQELRDLAR-RPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFV 298
G CP L + A YDL L+T DVPW D+ R R F RC Q L R ++
Sbjct 239 FGTCPSWLYEAADAMSYDLYLVTDIDVPWVDDNQRFFSDQRQEFLDRCLQVLEQRNRPYI 298
Query 299 VITGGWEERLSVSLRAVEELVRA 321
I+G W+ R + ++RAVE L++A
Sbjct 299 RISGSWDARFAKAIRAVEGLLQA 321
>gi|183222060|ref|YP_001840056.1| NadR family transcriptional regulator [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912126|ref|YP_001963681.1| NAD metabolism ATPase/kinase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776802|gb|ABZ95103.1| ATPase/kinase involved in NAD metabolism [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167780482|gb|ABZ98780.1| Putative transcriptional regulator, NadR family [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length=347
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/321 (36%), Positives = 174/321 (55%), Gaps = 3/321 (0%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+ HG++LGKF PPH GH++L + A++ D LT+++ S E IPG R WM EL P
Sbjct 1 MIHGLILGKFYPPHKGHLHLIKEAKKKCDVLTVLMCSLEKELIPGNLRYEWMLELLPNPN 60
Query 61 V--VHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAV 118
+ V + +ENPQ P EHP+FW IWK ++ + D VF +E Y A VLG + + +
Sbjct 61 IEIVWVKDENPQYPEEHPNFWQIWKQTINSHTNQQIDIVFTSELYGDQLASVLGCQHIPI 120
Query 119 DHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRT 178
D R VVP++ T IR P+ ++ IP +RP FVKR+ + G ES GKTTLA+ +A+ +T
Sbjct 121 DIDRKVVPISGTQIREKPIQFFEWIPEPIRPYFVKRIVLTGSESVGKTTLAKKLADHFQT 180
Query 179 KWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAE- 237
W+PE A+ E + ++ I +G + SE A+ + +L DTD L T V+ E
Sbjct 181 NWIPEYARDYLEKKSTPMAESDFLPIAKGHLLSEVEAAKSSHGILFLDTDLLTTKVYLER 240
Query 238 FLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSF 297
+ P YD +L D+PW+ D R + R R +A+ A R F
Sbjct 241 YYQREIPWLTERALGLQYDTSLFLDIDIPWEKDKLRDLGEEREGMKTRFLEAMEEAKRDF 300
Query 298 VVITGGWEERLSVSLRAVEEL 318
+ G + ER +++ V ++
Sbjct 301 FWVKGNFMERERLAIDYVNQI 321
>gi|83859956|ref|ZP_00953476.1| possible transcriptional regulatory protein nadr (probablyasnc-family)
[Oceanicaulis alexandrii HTCC2633]
gi|83852315|gb|EAP90169.1| possible transcriptional regulatory protein nadr (probablyasnc-family)
[Oceanicaulis alexandrii HTCC2633]
Length=329
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/317 (43%), Positives = 172/317 (55%), Gaps = 8/317 (2%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG VLGKFMPPHAGH+YLC+FA D+LTI+V S EPIPG R WM L+P RV+
Sbjct 6 HGFVLGKFMPPHAGHMYLCDFAAGLCDQLTILVCSLEREPIPGKLRHEWMSALYPDARVL 65
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
H + PQ P E PDFWDIW+ ++ V VF +E Y AQ LGA F D R
Sbjct 66 HFDRDVPQEPSESPDFWDIWRELVRSVHPEPIHRVFASEDYGLRLAQELGAEFWPADPER 125
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVP 182
PV+ T IR P+ HW I RP F + + + GPESTGK+ L Q +A L + P
Sbjct 126 ACRPVSGTQIRQAPMAHWSMIAPPARPYFTRTIVLHGPESTGKSMLGQDLARALGGAYAP 185
Query 183 ERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGG 242
E + EL G + I GQ A+ +A R AD +I DTD L T VW++ + G
Sbjct 186 EFGRTWCELYGTDCSAEDLRNIAAGQAAAIQAARRTADGFVISDTDGLLTEVWSQMMLGA 245
Query 243 CPQELRDLARRPY-DLTLLTTPDVPWDADDGRCV---PGARGTFFARCEQALRAAGRSFV 298
+ D + P DL LLT D P+ DDG V P R FFA +AL G +V
Sbjct 246 ---SVFDPSPEPEGDLYLLTDIDQPF-VDDGTRVYSDPADRERFFALSVEALERQGVDYV 301
Query 299 VITGGWEERLSVSLRAV 315
++G WE R V+L A+
Sbjct 302 RLSGSWEHRRVVALDAI 318
>gi|302533643|ref|ZP_07285985.1| nicotinamide-nucleotide adenylyltransferase [Streptomyces sp.
C]
gi|302442538|gb|EFL14354.1| nicotinamide-nucleotide adenylyltransferase [Streptomyces sp.
C]
Length=362
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/341 (38%), Positives = 172/341 (51%), Gaps = 25/341 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH +L A+ + LT++V + + E +P A RVAWMRE P VV
Sbjct 9 HGLVLGKFYPPHAGHHHLVRTAQDQCERLTVLVCAASVESVPLADRVAWMREEHPGAEVV 68
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
++ P P WD +G + R D VF +E Y + A+ GA V VD R
Sbjct 69 GAVDDVPV-DLHDPGIWDAHMTIFRGAVGRRVDAVFTSEEYGTELARRFGAEEVCVDPAR 127
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLR----- 177
T+ PV+ T +RADP W+ + VR A +RV ++G ESTG TTL++ +A R
Sbjct 128 TLFPVSGTAVRADPAATWEFLGPGVRAALTRRVVVLGAESTGTTTLSRELAAHYRRRGGV 187
Query 178 ---TKWVPERAKMLRELN--------------GGSLIGLEWAEIVRGQIASEEALARDAD 220
T WV E + E + E+ I R Q +EE AR
Sbjct 188 WAKTGWVAEYGREYSEEKLAAARAVDPAASWEDTTFTSREFPVIARRQDEAEERAARLGS 247
Query 221 RVLICDTDPLATTVWAEFLAGGCPQEL-RDLARRPYDLTLLTTPD-VPWDADDGRCVPGA 278
VL CDTD AT +W E GG E+ R ARRP DL LLT + VP++ D R P
Sbjct 248 PVLFCDTDSFATGIWHERYLGGRNAEVERIAARRPRDLYLLTDHEGVPFEDDGLRDGPEL 307
Query 279 RGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELV 319
R AR + L GR F+V++G RL ++ AV+ L+
Sbjct 308 RPWMTARFRRELARTGRRFLVVSGDRRTRLDAAVAAVDGLL 348
>gi|328881448|emb|CCA54687.1| Nicotinamide-nucleotide adenylyltransferase, NadR family or Ribosylnicotinamide
kinase [Streptomyces venezuelae ATCC 10712]
Length=359
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/341 (37%), Positives = 171/341 (51%), Gaps = 25/341 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH +L + A + LT++V +++ E I RV WMRE P VV
Sbjct 6 HGLVLGKFYPPHAGHHHLVDTALDRCERLTVLVCASSVESISLEDRVGWMREAHPDALVV 65
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
++ P + PD WD A + + R D VF +EPY + A+ GA V VD GR
Sbjct 66 GAVDDIPV-DLQDPDVWDAHMAVFRAAVPERVDAVFTSEPYGEELARRFGAESVCVDPGR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL------ 176
PV+ T +RADP HW + VR A +RV ++G ESTG TT+A A+A+
Sbjct 125 NRFPVSGTAVRADPAAHWDFLTPPVRSALTRRVVVLGAESTGTTTMALALADHYRRRGGV 184
Query 177 --RTKWVPERAKMLRELNGGSLIG----LEWAE----------IVRGQIASEEALARDAD 220
RT++VPE + EL L +W++ I + Q EEA ARD
Sbjct 185 WARTRYVPEYGREYSELKLAELRAERPDAQWSDVSFHSADFPVIAQRQAELEEAAARDGS 244
Query 221 RVLICDTDPLATTVWAEFLAGGCPQELRDLAR--RPYDLTLLTTPDVPWDADDGRCVPGA 278
VL CDTD ATT+W E G ++A R + L V ++ D R
Sbjct 245 PVLFCDTDAFATTIWHERYMGTTSPSTGEIAALGRQHLWLLTDHRGVDFEDDGLRDGEHL 304
Query 279 RGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELV 319
R AR L GR V++G EERL+ ++ AV+EL+
Sbjct 305 RPWMTARFLTQLAHTGRRTAVLSGPHEERLAAAVAAVDELL 345
>gi|291301951|ref|YP_003513229.1| cytidyltransferase-related domain-containing protein [Stackebrandtia
nassauensis DSM 44728]
gi|290571171|gb|ADD44136.1| cytidyltransferase-related domain protein [Stackebrandtia nassauensis
DSM 44728]
Length=359
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/341 (37%), Positives = 171/341 (51%), Gaps = 25/341 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH ++ + LT++V + + E IP A+RV W+RE P V
Sbjct 6 HGLVLGKFYPPHAGHHHVIRTGLAACERLTVLVCAASVESIPLARRVEWLREAHPLT-TV 64
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
A ++ + P WD A + + R D VF +E Y A+ A+ GA VAVD R
Sbjct 65 VGAVDDVEVDVHDPAVWDAHMAIFRAAVPGRVDAVFTSEDYGAELARRFGAEHVAVDVDR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL------ 176
+ PV+ +RADP+GHW + VR +RV ++G ES+G TTLA+ +AE
Sbjct 125 GLFPVSGRRVRADPVGHWGFLEAPVRAGLARRVVVLGAESSGTTTLARGLAEHYAGRGGV 184
Query 177 --RTKWVPERAKMLRELNGGSLI--------------GLEWAEIVRGQIASEEALARDAD 220
T+WVPE + E +L+ G E+ I R Q EEA AR
Sbjct 185 WADTRWVPEFGREYSEAKLAALLVERPDAGWSEVRFDGDEFPFIARRQDEMEEAAARRGS 244
Query 221 RVLICDTDPLATTVWAE-FLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDG-RCVPGA 278
VL CDTD AT +W E +L G + R R L +LT D DDG R
Sbjct 245 PVLFCDTDSFATAIWHERYLGRGNAEVARIAERVERHLWILTDHDGVAFEDDGLRDGESL 304
Query 279 RGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELV 319
RG R ALR R FV ++G E+RL ++ AV+EL+
Sbjct 305 RGWMTRRFRDALRRTRRPFVEVSGSREQRLKQAVAAVDELL 345
>gi|323358875|ref|YP_004225271.1| nicotinamide mononucleotide adenylyltransferase [Microbacterium
testaceum StLB037]
gi|323275246|dbj|BAJ75391.1| nicotinamide mononucleotide adenylyltransferase [Microbacterium
testaceum StLB037]
Length=364
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/324 (39%), Positives = 171/324 (53%), Gaps = 9/324 (2%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+V+GKF P H GH +L A R + +T+ V + + E I +R AW+RE P RVV
Sbjct 16 HGVVVGKFYPLHVGHAHLIRSAVRACERVTVEVIAASVESIALEKRAAWVREDHPTVRVV 75
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
L ++ P + WD A++ G+L D VF ++ Y A+ A+ LGA +V VD GR
Sbjct 76 DLLDDTPV-DFASETAWDAHTATIAGLLDEPVDVVFTSDEYGAELARRLGADWVQVDPGR 134
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVP 182
+ PV+ T IRAD HW + VR RV ++G ESTG TTLA+A+A +L T WVP
Sbjct 135 RINPVSGTAIRADLDAHWHELSPAVRAGLTARVVVLGAESTGSTTLAEALAAELGTLWVP 194
Query 183 ERAKMLRELNGGSLIGL----EWAEIVRGQIASEEALARDADR-VLICDTDPLATTVWAE 237
E + L E G L E+ +V QIA E+ AR A R VLICDTD LAT +W E
Sbjct 195 EYGRELSETREGGLEAPWRSDEFDLVVDRQIAWEQDAARRAPRPVLICDTDVLATALWHE 254
Query 238 FLAGG-CPQEL-RDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGR 295
G P+ L R A RP L LLT ++P+ D R R R + L
Sbjct 255 RYVGTPAPRILERAAAHRPV-LYLLTGDEIPFVQDGMRDGEHIRADMQERFREVLAGQSV 313
Query 296 SFVVITGGWEERLSVSLRAVEELV 319
+ + G ER++ +L A+ V
Sbjct 314 PWFEVRGSVAERVASALPAIRRAV 337
>gi|254385861|ref|ZP_05001180.1| transcriptional regulatory protein [Streptomyces sp. Mg1]
gi|194344725|gb|EDX25691.1| transcriptional regulatory protein [Streptomyces sp. Mg1]
Length=357
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/339 (37%), Positives = 174/339 (52%), Gaps = 25/339 (7%)
Query 5 MVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVVHL 64
MVLGKF PPHAGH +L A+ + LT++V + + E +P A RVAWMRE P VV
Sbjct 1 MVLGKFYPPHAGHHHLVRTAQDQCERLTVLVCAASVESVPLADRVAWMREAHPGAEVVGA 60
Query 65 ANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGRTV 124
++ P ++ P W+ +G + R D VF +E Y + A+ GA V VD RT+
Sbjct 61 VDDIPVDLYD-PAVWEAHMEVFRGAVPGRVDAVFTSEEYGGELARRFGAEEVLVDRERTL 119
Query 125 VPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTK----- 179
PV+ T +RADP+ W+ + VR A +R+ ++G ESTG TTL++A+A R++
Sbjct 120 FPVSGTAVRADPVAAWEFLGPAVRAALTRRIVVLGAESTGTTTLSRALAGHYRSRGGVWA 179
Query 180 ---WVPERAKMLRELN--------------GGSLIGLEWAEIVRGQIASEEALARDADRV 222
WV E + E S E+ I R Q A EE AR V
Sbjct 180 KTGWVAEYGRRYSEEKLAAARAADPAASWPDVSFTSEEFPVIARRQDADEERAARLGSPV 239
Query 223 LICDTDPLATTVWAE-FLAGGCPQELRDLARRPYDLTLLTT-PDVPWDADDGRCVPGARG 280
L CDTD AT +W E ++ G + R A R DL LLT DVP++ D R P R
Sbjct 240 LFCDTDSFATGIWHERYMDGRNAEVERIAAGRLRDLYLLTDHADVPFEDDGLRDGPQLRP 299
Query 281 TFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELV 319
R + L GR F+V+ G E RL+ ++ AV+EL+
Sbjct 300 WMTGRFREELERTGRRFLVVAGDREARLARAVAAVDELL 338
>gi|182439524|ref|YP_001827243.1| putative NadR-like transcriptional regulator [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178468040|dbj|BAG22560.1| putative NadR-like transcriptional regulator [Streptomyces griseus
subsp. griseus NBRC 13350]
Length=359
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/341 (37%), Positives = 170/341 (50%), Gaps = 25/341 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH +L E AR + LT++V + + E +P A RVAWMRE+ P D V
Sbjct 6 HGLVLGKFYPPHAGHHHLVETARERCERLTVLVCAASVESVPLADRVAWMREIHP-DVTV 64
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
A ++ P WD A + R D VF +E Y + + GA V VD R
Sbjct 65 VGAVDDTHMDVHDPAVWDAHMAVFTAAVPERVDAVFTSEAYGEELGRRFGAESVLVDPDR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL------ 176
T+ PV+ T +R P W + VR A +RV ++G ESTG TTLA+A+A
Sbjct 125 TLFPVSGTAVRRSPADCWDFLRPPVRAALARRVVVLGAESTGTTTLARALAAHYRARGGV 184
Query 177 --RTKWVPERAKMLRELNGGSL-----------IGL---EWAEIVRGQIASEEALARDAD 220
RT +V E + E +L +G ++ I Q EE AR
Sbjct 185 WARTGYVAEYGREYSEHKLAALRRRWPGAAWEDVGFTTDDFPHIATAQNDREEEAARTGS 244
Query 221 RVLICDTDPLATTVWAEFLAGGCPQELRDLA-RRPYDLTLLTTPD-VPWDADDGRCVPGA 278
VL+CDTD ATTVW E GG + ++A R + L LLT + VP++ D R
Sbjct 245 PVLVCDTDSFATTVWHERYVGGRNPLVEEIADRTAHHLWLLTDHEGVPFEDDGLRDGEEL 304
Query 279 RGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELV 319
R R L GR F+ ITG E RL+ ++ AV+EL+
Sbjct 305 RPWMTDRFRAELTRTGRRFIEITGPPEARLTAAVTAVDELL 345
>gi|326780188|ref|ZP_08239453.1| cytidyltransferase-related domain protein [Streptomyces cf. griseus
XylebKG-1]
gi|326660521|gb|EGE45367.1| cytidyltransferase-related domain protein [Streptomyces griseus
XylebKG-1]
Length=359
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/341 (38%), Positives = 170/341 (50%), Gaps = 25/341 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH +L E AR + LT++V + + E +P A RVAWMRE+ P D V
Sbjct 6 HGLVLGKFYPPHAGHHHLVETARERCERLTVLVCAASVESVPLADRVAWMREIHP-DVTV 64
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
A ++ P WD A + R D VF +E Y + + GA V VD R
Sbjct 65 VGAVDDTHMDVHDPAVWDAHMAVFTAAVPERVDAVFTSEAYGEELGRRFGAESVLVDPDR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL------ 176
T+ PV+ T +R P W + VR A +RV ++G ESTG TTLA+A+A
Sbjct 125 TLFPVSGTAVRRSPADCWDFLRPPVRAALARRVVVLGAESTGTTTLARALAAHYRARGGV 184
Query 177 --RTKWVPERAKMLRELNGGSL-----------IGLEWAE---IVRGQIASEEALARDAD 220
RT +V E + E +L +G A+ I Q EE AR
Sbjct 185 WARTGYVAEYGREYSEHKLAALRRRWPGAAWEDVGFTTADFPHIATAQNDREEEAARTGS 244
Query 221 RVLICDTDPLATTVWAEFLAGGCPQELRDLARR-PYDLTLLTTPD-VPWDADDGRCVPGA 278
VL+CDTD ATTVW E GG + ++A R + L LLT + VP++ D R
Sbjct 245 PVLVCDTDSFATTVWHERYVGGRNPLVEEIADRAAHHLWLLTDHEGVPFEDDGLRDGEEL 304
Query 279 RGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELV 319
R R L GR F+ ITG E RL+ ++ AV+EL+
Sbjct 305 RPWMTDRFRAELTRTGRRFIEITGPPEARLTAAVTAVDELL 345
>gi|168702604|ref|ZP_02734881.1| ATPase/kinase involved in NAD metabolism-like protein [Gemmata
obscuriglobus UQM 2246]
Length=329
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/324 (39%), Positives = 160/324 (50%), Gaps = 13/324 (4%)
Query 2 THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRV 61
T G+V+GKF PPH GH L + A DE+ +VV + E P R W+RE+ P
Sbjct 3 TRGLVVGKFYPPHRGHKLLIDTALAQADEVHVVVCARPGEHPPADVRARWIREIHP-GAT 61
Query 62 VHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHG 121
VHL ++ P+ +W A +L P+ VF +E Y FA LG R V VD
Sbjct 62 VHLIDDRYD-----PNDSRVWAAVCTALLGFAPEVVFTSESYGEPFAAHLGCRHVLVDRQ 116
Query 122 RTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWV 181
R VPV+ T +RADP +W + VR + +RV +IG ESTGKTTLA +A L T WV
Sbjct 117 RAAVPVSGTAVRADPFANWDFLDPPVRGFYARRVVLIGAESTGKTTLAADLAAALGTVWV 176
Query 182 PERAKMLRELNGGSLIGLEWA-----EIVRGQIASEEALARDADRVLICDTDPLATTVWA 236
PE + E WA I RGQ E+A AR A+RVL+CDTD AT VW
Sbjct 177 PEYGREYWEQKAARGEPDVWAPEEFVTIARGQCEREDAAARRANRVLVCDTDAFATRVWH 236
Query 237 EFLAGGCPQELRDLAR--RPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAG 294
G E+ +AR R DL LLT + P+ D R R L
Sbjct 237 RRYMGSWSAEVDAVARAHRRPDLYLLTDINTPFFQDGTRDGERIRDWMHQTFVNELTTDN 296
Query 295 RSFVVITGGWEERLSVSLRAVEEL 318
RSFV + G ERL+ +L A+ L
Sbjct 297 RSFVRVLGTPAERLATALDAINRL 320
>gi|297195215|ref|ZP_06912613.1| transcriptional regulatory protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152698|gb|EFH31939.1| transcriptional regulatory protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=356
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/330 (38%), Positives = 164/330 (50%), Gaps = 24/330 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH +L A + LT++V +++ E IP A RVAWMRE+ P RVV
Sbjct 6 HGLVLGKFYPPHAGHHHLVRTAADRCERLTVLVCASSVETIPLADRVAWMREVHPGARVV 65
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
++ P + PD WD A + + R D VF +E Y A+ + GA V VD R
Sbjct 66 GTMDDIPVDVTD-PDVWDAHMAVFRAAVPGRVDAVFTSEAYGAELGRRFGADSVCVDPDR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLR----- 177
+V PV+ + +R DP+G W + VR A V+RV ++G ESTG TT+A+A+AE R
Sbjct 125 SVFPVSGSAVRKDPVGCWDFLEPPVRAALVRRVVVLGAESTGTTTMARALAEHYRRRGGV 184
Query 178 ---TKWVPERAKMLRELNGGSL----IGLEWAE----------IVRGQIASEEALARDAD 220
T+WV E + E +L G W E I R Q EE AR
Sbjct 185 WAQTRWVAEYGREFSEHKLAALRARRPGAGWEEVAFSSDEFPLIARRQAVLEERAARAGS 244
Query 221 RVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARG 280
VL CDTD ATT+W E GG P + R + L V ++ D R R
Sbjct 245 PVLFCDTDAFATTIWHERYMGG-PYPVAPEPCRQHLWLLTDHTGVGFEDDGLRDGEHLRP 303
Query 281 TFFARCEQALRAAGRSFVVITGGWEERLSV 310
R + L GR V +TG E RL+
Sbjct 304 WMTGRFREELARTGRRTVELTGPHERRLAT 333
>gi|296129290|ref|YP_003636540.1| putative NadR-like transcriptional regulator [Cellulomonas flavigena
DSM 20109]
gi|296021105|gb|ADG74341.1| putative NadR-like transcriptional regulator [Cellulomonas flavigena
DSM 20109]
Length=350
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/333 (37%), Positives = 176/333 (53%), Gaps = 17/333 (5%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR 60
+THG+V+GKF PPHAGH+ L A+ D +T+ V +++AE +PG R AW+RE P
Sbjct 1 MTHGLVIGKFYPPHAGHLALVHAAQARCDRVTVQVLASSAESLPGEVRAAWLREELPTAH 60
Query 61 VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDH 120
VVH +++P + P WD A + +L D V ++ Y + A+ LGAR+ VD
Sbjct 61 VVHGIDDHPV-DYADPGAWDAHVAVIASLLDAPVDLVVTSDSYGGELARRLGARWHRVDP 119
Query 121 GRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKW 180
GR +PV+ T +RADP +W +P VR FV+RV + G ESTG TTLAQ +
Sbjct 120 GRQGLPVSGTAVRADPARYWWALPAAVRAWFVRRVVVTGAESTGTTTLAQDLTAHYG--- 176
Query 181 VPERAKMLRELNGGSLIGL-------EWAEIVRGQIASEEALARDADR-VLICDTDPLAT 232
+P A+ RE GL E+ + R Q E+ AR R +L+CDTD AT
Sbjct 177 LPTVAEFGREWTTARPGGLDAPWHTAEFDLVAREQARREDDAARRTPRPLLVCDTDVTAT 236
Query 233 TVWAEFLAGGCPQELRDLAR-RPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALR 291
T+W E G + LA+ R DL LLT ++P+ D R R AR + L
Sbjct 237 TLWHERYVGHASPTVVALAQERVPDLYLLTGDEIPFVQDGWRDGEHVRHAMQARFREELT 296
Query 292 ----AAGRSFVVITGGWEERLSVSLRAVEELVR 320
A G +V + G ERL+ ++ V++L+R
Sbjct 297 RREAADGVPWVELRGSRTERLAAAVALVDDLLR 329
>gi|239986725|ref|ZP_04707389.1| putative NadR-like transcriptional regulator [Streptomyces roseosporus
NRRL 11379]
Length=359
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/341 (37%), Positives = 170/341 (50%), Gaps = 25/341 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH +L A+ LT++V + + E +P A RVAWMRE+ P D V
Sbjct 6 HGLVLGKFYPPHAGHHHLVRTAQDRCARLTVLVCAASVESVPLADRVAWMREIHP-DVTV 64
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
A ++ P WD A + + R D VF +E Y + + GA V VD R
Sbjct 65 VGAVDDTHMDVNDPAVWDAHMAVFRAAVPERVDAVFTSEAYGEELGRRFGADSVLVDPDR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL------ 176
T+ PV+ T +R DP+G W + VR A +RV ++G ESTG TTLA+A+A
Sbjct 125 TLFPVSGTAVRKDPVGCWDFLQPPVRAALARRVVVLGAESTGTTTLARALAAHYRARGGV 184
Query 177 --RTKWVPERAKMLRELNGGSLI----GLEWAEIV----------RGQIASEEALARDAD 220
RT +V E + E +L G W +++ R Q EEA AR
Sbjct 185 WARTGYVAEYGREYSEDKLAALRGRWPGAAWEDVIFTTDDFPLIARIQNEREEAAARAGS 244
Query 221 RVLICDTDPLATTVWAEFLAGGCPQELRDLARR-PYDLTLLTTPDVPWDADDG-RCVPGA 278
VL CDTD ATTVW E GG + ++A R + L LLT + DDG R
Sbjct 245 PVLFCDTDSFATTVWHERYVGGRNPLVEEIADRVGHHLWLLTDHEGVAFEDDGLRDGEEL 304
Query 279 RGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELV 319
R R L GR F+ +TG E RL+ ++ AV+ L+
Sbjct 305 RPWMTDRFRAELTRTGRRFIEMTGPPETRLAAAVAAVDGLL 345
>gi|312139091|ref|YP_004006427.1| cytidylyltransferase [Rhodococcus equi 103S]
gi|311888430|emb|CBH47742.1| putative cytidylyltransferase [Rhodococcus equi 103S]
Length=362
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 129/350 (37%), Positives = 173/350 (50%), Gaps = 30/350 (8%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
H +V+GKF PPH GH +L A R D +T+VV ++AAE IP A RV+WMR+ D V
Sbjct 7 HALVIGKFYPPHRGHHHLVRSAARIADRVTVVVMASAAESIPLADRVSWMRQTHAGDSTV 66
Query 63 HLANENPQRPW--EHPDFWD----IWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFV 116
+A P E W A+++ V T D V +E Y + AQ A V
Sbjct 67 RVAGIVCDAPMDLESTVVWAAQVACMSAAVRQVDTTPIDAVVSSEKYGDELAQWFSATHV 126
Query 117 AVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL 176
+VD R PV+ T RAD GHW + R RV ++G ESTG TT+++A+A++
Sbjct 127 SVDPDRIAHPVSGTACRADLAGHWDRLGEPARAGLTTRVVVLGAESTGTTTVSRALAQRY 186
Query 177 --------RTKWVPE--RAKMLRELN-------GGSLIGLEW-----AEIVRGQIASEEA 214
RT WVPE R L +L+ ++ LEW A+I R Q EE
Sbjct 187 RDRGGAWARTGWVPEYGRQATLDKLDRLRAVRPDAAMEELEWTDDDFADIAREQTRMEER 246
Query 215 LARDADRVLICDTDPLATTVWA-EFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGR 273
AR VLICDTD ATTVW +L + ++A RP L VP+ D R
Sbjct 247 AARTGSPVLICDTDAFATTVWERRYLGTDSARAWVEVADRPAIYLLTDHVGVPFVQDGIR 306
Query 274 CVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR 323
R E AL A GRS+V++TG ER+S++ R V +L A+R
Sbjct 307 DGEHIRAEMTRWFEDALTATGRSWVLLTGPLSERVSLAER-VADLALAQR 355
>gi|325673612|ref|ZP_08153303.1| NadR family transcriptional regulator [Rhodococcus equi ATCC
33707]
gi|325555633|gb|EGD25304.1| NadR family transcriptional regulator [Rhodococcus equi ATCC
33707]
Length=362
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 123/343 (36%), Positives = 167/343 (49%), Gaps = 29/343 (8%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
H +V+GKF PPH GH +L A R D +T+VV ++AAE IP A RV+WMR+ D V
Sbjct 7 HALVIGKFYPPHLGHHHLVRSAARIADRVTVVVMASAAESIPLADRVSWMRQSHAEDAAV 66
Query 63 HLANENPQRPW--EHPDFWD----IWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFV 116
+ P E W +A+++ V T D V +E Y + AQ GA V
Sbjct 67 QITGIACDAPMDLESTAVWAAQVACMRAAVRQVDTTPIDAVVSSEKYGDELAQWFGATHV 126
Query 117 AVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL 176
VD R PV+ T RAD G+W + R RV ++G ESTG TT+++A+A++
Sbjct 127 CVDPDRIAHPVSGTACRADLAGYWDVLDEPARAGLATRVVVLGSESTGTTTVSRALAQRY 186
Query 177 --------RTKWVPE--RAKMLRELN-------GGSLIGLEW-----AEIVRGQIASEEA 214
RT WVPE R L +L+ ++ LEW A+I R Q EE+
Sbjct 187 RDRGGVWARTGWVPEYGRQATLDKLDRLRAVRHDAAMEELEWTGDDFADIAREQTRMEES 246
Query 215 LARDADRVLICDTDPLATTVWA-EFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGR 273
AR VLICDTD ATTVW +L + +A RP L VP+ D R
Sbjct 247 AARAGSPVLICDTDAFATTVWERRYLGTDSGRAWAGVADRPSIYLLTDHVGVPFVQDGIR 306
Query 274 CVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVE 316
R E AL A GRS+V++ G ER+ +++R V
Sbjct 307 DGEHIRAEMTRWFEDALTATGRSWVLLNGPLSERVDLAVRVVN 349
>gi|332669989|ref|YP_004452997.1| putative NadR-like transcriptional regulator [Cellulomonas fimi
ATCC 484]
gi|332339027|gb|AEE45610.1| putative NadR-like transcriptional regulator [Cellulomonas fimi
ATCC 484]
Length=362
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/326 (37%), Positives = 168/326 (52%), Gaps = 11/326 (3%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+V+GKF PPHAGH+ L A +T+ V +++ E +P R W+R+ P VV
Sbjct 6 HGLVIGKFYPPHAGHLALVRAALARCARVTVQVLASSQESLPAELRARWLRDELPGAHVV 65
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
H ++ P + W A ++G+L D +F ++ Y + A+ LGAR+V VD GR
Sbjct 66 HGLDDAPVD-YASEAAWQAHTAVIEGLLDAPVDALFSSDDYGEELARRLGARWVQVDPGR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVP 182
PV+A +RADP +W +P VR FV+RV +IG ESTG TTLA+A+ L V
Sbjct 125 RGTPVSARAVRADPGAYWWALPAAVRAWFVRRVVVIGAESTGTTTLAEALTAHLGLPTVA 184
Query 183 ERAKMLRELNGGSLIG----LEWAEIVRGQIASE-EALARDADRVLICDTDPLATTVWAE 237
E + E+ G E+ + R Q +E +A AR +L+CDTD LAT VW E
Sbjct 185 EFGREWSEIRPGGFTAPWHTAEFDLVAREQARTEDDAAARTPVPLLVCDTDVLATAVWHE 244
Query 238 FLAGGCPQELRDL-ARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQAL----RA 292
G +R L ARR DL LLT ++P+ D R R R + L A
Sbjct 245 RYVGRPSPSVRSLAARRVPDLYLLTGDEIPFVQDGLRDGEHLRHAMQDRFREVLAEQEAA 304
Query 293 AGRSFVVITGGWEERLSVSLRAVEEL 318
G +V + G ERL+ +L VE L
Sbjct 305 GGAPWVELRGDPGERLAAALALVEPL 330
>gi|320011604|gb|ADW06454.1| cytidyltransferase-related domain protein [Streptomyces flavogriseus
ATCC 33331]
Length=359
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/329 (39%), Positives = 161/329 (49%), Gaps = 25/329 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+VLGKF PPHAGH +L AR + LT++V + + E +P A RVAWMRE P RVV
Sbjct 6 HGLVLGKFYPPHAGHHHLVRTARDRCETLTVLVCAASVESVPLADRVAWMREAHPDVRVV 65
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGR 122
++ P WD + R D VF +E Y + A+ GA+ V VD GR
Sbjct 66 GAVDDIPM-DLHDAAVWDAHMEVFTTAVPERVDAVFTSESYGEELARRFGAQSVLVDPGR 124
Query 123 TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKL------ 176
T+ PV+ T +RADP G W ++ VR A +RV ++G ESTG TTLA+A+ E
Sbjct 125 TLFPVSGTAVRADPAGCWDYLEPPVRAALARRVVVLGAESTGTTTLARALTEHYRRRGGV 184
Query 177 --RTKWVPERAKMLRELNGGSLI----GLEWAE----------IVRGQIASEEALARDAD 220
RT V E + E L G +W + I Q A EEA AR
Sbjct 185 WARTLCVDEYGREFSERKLADLRSRWPGAQWEDVSFTTDDFPLIAETQNAREEAAARAGS 244
Query 221 RVLICDTDPLATTVWAE-FLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDG-RCVPGA 278
+L+CDTD ATTVW E ++ G P R R + L LLT + DDG R
Sbjct 245 PLLLCDTDSFATTVWHERYIGGRNPLVERTADRLTHHLWLLTDHEGVAFEDDGLRDGEEL 304
Query 279 RGTFFARCEQALRAAGRSFVVITGGWEER 307
R R L GR FV ITG ER
Sbjct 305 RPWMTDRFRAELTRTGRRFVEITGSHRER 333
>gi|190572493|ref|YP_001970338.1| putative transcriptional regulator NadR [Stenotrophomonas maltophilia
K279a]
gi|190010415|emb|CAQ44023.1| putative TRANSCRIPTIONAL REGULATORY PROTEIN NADR (PROBABLY ASNC-FAMILY)
[Stenotrophomonas maltophilia K279a]
Length=357
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/339 (34%), Positives = 158/339 (47%), Gaps = 38/339 (11%)
Query 1 VTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVA-WMRELFPFD 59
V G+V+GKF P H GH +L EFA +L ++ S P A+R W+R FP
Sbjct 7 VARGLVVGKFCPLHLGHEHLIEFAATRCRQLLVIGWSQPGFPGYSAERRERWLRARFPQA 66
Query 60 RVVHLA-----------------------NENPQRPWEHPDFWDIWKASLQGVLATRPDF 96
V L NE+ QR + ++ +Q V
Sbjct 67 TVAVLDDARLAALCTQHGLPVRTLPQDSDNEHVQREFTAWLCLSLFGGPVQAV------- 119
Query 97 VFGAEPYNADFAQVLGARF-VAVDHGRT-----VVPVTATDIRADPLGHWQHIPRCVRPA 150
+ E Y FAQ L F +V H R V T +RADP H + V
Sbjct 120 -YTGEDYGDGFAQALATHFGASVRHERLERALDVGQACGTQLRADPHAHRHGLAPQVYAG 178
Query 151 FVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIA 210
+V+RV+ IG ES+GKTTLA+ +AE+L+T WVPE + L E GG L + I Q
Sbjct 179 YVQRVAFIGGESSGKTTLARVMAERLQTVWVPEYGRTLWEQQGGELTPDDLLRIAMAQPQ 238
Query 211 SEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDAD 270
E+ AR A R L CDT P+ T ++ +++G P+ LR A RPYDL L PD+P+D D
Sbjct 239 HEDETARHAHRWLFCDTTPMVTLGYSGWMSGTAPEALRQAALRPYDLLFLCAPDIPFDQD 298
Query 271 DGRCVPGARGTFFARCEQALRAAGRSFVVITGGWEERLS 309
R R A + L A G +V++ GG E R++
Sbjct 299 GTRVGEAFRAQQHAWYVRELEARGVDYVLLEGGLEARIA 337
>gi|310765158|gb|ADP10108.1| nicotinamide-nucleotide adenylyltransferase [Erwinia sp. Ejp617]
Length=408
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/347 (31%), Positives = 173/347 (50%), Gaps = 30/347 (8%)
Query 2 THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRV 49
T G+V+GKF P H GH+YL + A VDEL I++G S ++ + R+
Sbjct 65 TIGVVVGKFYPLHTGHIYLIQRACSQVDELHIIMGYDEPRDRKLFEESAMSQQPTVSDRL 124
Query 50 AWMRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA- 105
W+ + F + + +H+ + N Q +P WD+W A +Q +A R PD ++ +E +A
Sbjct 125 RWLLQTFKYQKNIHIHSFNEQGMEPYPHGWDVWSAGIQEFMADRGIIPDLIYTSEEADAP 184
Query 106 DFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGK 165
F LG V +D R+ + ++ + IR DP +W++IP V+P FV+ V+I+G ES+GK
Sbjct 185 QFRTHLGVEAVLIDPKRSFMNISGSQIRQDPFHYWEYIPTEVKPFFVRTVAILGGESSGK 244
Query 166 TTLAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDAD 220
+TL +A T W R + L GG + L++++ I GQ + + A+
Sbjct 245 STLVNKLANIFNTTSAWEFGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKYAN 303
Query 221 RVLICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG 277
+V DTD + T + + G Q L D R +DL +L +VPW AD R +
Sbjct 304 KVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILVENNVPWVADGLRSLGS 361
Query 278 A--RGTFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
+ R F A L S+V V ++ER + V+E++ A
Sbjct 362 SVDRKEFQALLMSLLEENNISYVQVKQDNYDERFLRCVELVKEMLGA 408
>gi|269796502|ref|YP_003315957.1| cytidyltransferase-related enzyme [Sanguibacter keddieii DSM
10542]
gi|269098687|gb|ACZ23123.1| cytidyltransferase-related enzyme [Sanguibacter keddieii DSM
10542]
Length=395
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 166/340 (49%), Gaps = 20/340 (5%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVV 62
HG+V+GKF P HAGH+ L A D +T+ V ++ E IP R W+ + P VV
Sbjct 23 HGLVIGKFYPVHAGHLNLVRTALERCDHVTVQVLWSSQESIPAELRARWISDELPGAHVV 82
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVL----------ATRPDFVFGAEPYNADFAQVLG 112
++ P +E D WD + ++ +L D VF ++ Y A+ A+
Sbjct 83 TGFDDAPVD-YESDDAWDAHVSVMKDLLDDSCVPGCEVEATVDAVFTSDVYGAEMARRFD 141
Query 113 ARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAV 172
A +V VD GR V V+ T +R+DP HW +P VR FV+RV ++G ESTG TTLA+A+
Sbjct 142 AAWVQVDPGRAAVSVSGTAVRSDPGAHWWALPGAVRSWFVRRVVVLGAESTGTTTLAEAL 201
Query 173 AEKLRTKWVPERAKMLRELNGGSLIG----LEWAEIVRGQIASEEALARDADR-VLICDT 227
VPE + E+ G L E+ + R Q E+ AR +L+CDT
Sbjct 202 QAHYGLPAVPEFGREWSEVRPGGLEAPWHTAEFDLVAREQARVEDDAARGTPLPLLVCDT 261
Query 228 DPLATTVWAEFLAGG-CPQELRDLARRPYDLTLLTTPDVPWDAD---DGRCVPGARGTFF 283
DP ATT+W E G P A R DL LLT ++P+ D DG V F
Sbjct 262 DPFATTLWHERYTGSRSPSVEAFAASRVPDLYLLTGDEIPFVQDGLRDGEHVRHGMQQRF 321
Query 284 ARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR 323
A AG +V + G EERL+ ++R V+ LV R
Sbjct 322 REVLAAQADAGAPWVELRGTREERLAEAVRLVDALVATPR 361
>gi|259907345|ref|YP_002647701.1| nicotinamide-nucleotide adenylyltransferase [Erwinia pyrifoliae
Ep1/96]
gi|224962967|emb|CAX54448.1| Transcriptional regulator NadR [Erwinia pyrifoliae Ep1/96]
gi|283477167|emb|CAY73074.1| probable nadAB transcriptional regulator [Erwinia pyrifoliae
DSM 12163]
Length=408
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/345 (31%), Positives = 171/345 (50%), Gaps = 30/345 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRVAW 51
G+V+GKF P H GH+YL + A VDEL I++G S ++ + R+ W
Sbjct 67 GVVVGKFYPLHTGHIYLIQRACSQVDELHIIMGYDEPRDRKLFEESAMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ + N Q +P WD+W A +Q +A R PD ++ +E +A F
Sbjct 127 LLQTFKYQKNIHIHSFNEQGMEPYPHGWDVWSAGIQEFMADRGIIPDLIYTSEEADAPQF 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
LG V +D R+ + ++ IR DP +W++IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 RTHLGVEAVLIDPKRSFMNISGGQIRQDPFHYWEYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEFGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGA- 278
DTD + T + + G Q L D R +DL +L +VPW AD R + +
Sbjct 306 AFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILVENNVPWVADGLRSLGSSV 363
Query 279 -RGTFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
R F A L S+V V ++ER + V+E++ A
Sbjct 364 DRKEFQALLMSLLEENNISYVQVKQDNYDERFLRCVELVKEMLGA 408
>gi|182413991|ref|YP_001819057.1| transcriptional regulatory protein NadR [Opitutus terrae PB90-1]
gi|177841205|gb|ACB75457.1| putative transcriptional regulatory protein NadR (probably AsnC-family)
[Opitutus terrae PB90-1]
Length=337
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/309 (34%), Positives = 162/309 (53%), Gaps = 10/309 (3%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVVH 63
G+V+GKF+PPH GH L E A +++T++V ++PIP R W++E+ P RV+
Sbjct 6 GVVIGKFLPPHRGHRLLIETAIGASEQVTVIVCGKPSDPIPAELRGVWLQEIHPTARVMV 65
Query 64 LANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGRT 123
+ + + + +W + L PD VF +E Y +A +G+ V VD R
Sbjct 66 IDDRYDENDSQ------VWAENTMQWLGRAPDAVFTSESYGDRYAGFMGSVHVNVDQRRE 119
Query 124 VVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPE 183
VP++ T +R+DP +W+++ VR F KRV ++G ESTG TTLA +A +T+WV E
Sbjct 120 RVPISGTAVRSDPYANWEYLEPPVRGWFAKRVCVLGAESTGTTTLACDLARAFQTEWVEE 179
Query 184 RAK---MLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
+ + + +G + E+ I R Q E+A AR A+RVLICDT+ AT +W
Sbjct 180 YGREYSVTKMASGEAWRTDEFPVIAREQTRREDAAARRANRVLICDTNAFATALWHRRYV 239
Query 241 GGCPQELRDLARRPY-DLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVV 299
GG EL +A++ DL LLT ++P+ D R R +AL + +
Sbjct 240 GGTNSELDSIAQQVRCDLYLLTGDEIPFVQDGLRDGEHIRHQMHGWFVEALDRQSVPWRL 299
Query 300 ITGGWEERL 308
+ G ERL
Sbjct 300 VQGSQAERL 308
>gi|171909588|ref|ZP_02925058.1| ATPase/kinase involved in NAD metabolism-like protein [Verrucomicrobium
spinosum DSM 4136]
Length=347
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/339 (36%), Positives = 164/339 (49%), Gaps = 26/339 (7%)
Query 3 HGMVLGKFMPPHAGHVYLCEFARRWVDEL-TIVVGSTAAEPIPGAQ---RVAWMRELFPF 58
HG+V+GKF P H GH + RR ++E +VV S PG + R AW+ LFP
Sbjct 8 HGLVVGKFCPLHKGHEAVI---RRALEECENVVVLSYTVPEFPGCEPEKRAAWLGSLFPE 64
Query 59 DRVVHLANENP----QRPWEHPD---FWDIWKASLQGVLATRPDFVFGAEPYNADFAQVL 111
+ L ++P P + PD + VL T D VF +E Y FA L
Sbjct 65 TTRIVLGADHPWGLVPPPNDDPDESRHRRFVGQVCREVLRTTVDAVFTSESYGDGFAAEL 124
Query 112 GARF------------VAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIG 159
F V VD GR+V+PV+ T +RADP G Q + V +FVKR+ ++G
Sbjct 125 KRYFREYDAGHREVVHVPVDPGRSVLPVSGTALRADPHGLRQWLSPVVYASFVKRICLLG 184
Query 160 PESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDA 219
ES+GK+TLA A+A+K T V E + L GG L + I Q+A EE A A
Sbjct 185 GESSGKSTLATALAQKHDTLHVAEYGRELWVNQGGHLSYEDLLHIGEVQVAREEETAGRA 244
Query 220 DRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGAR 279
+R L CDT PL T + G +L LA+R YD+ +L PD+P+D D R R
Sbjct 245 NRYLFCDTSPLTTLFYCLEDHGRAEPDLWALAKRKYDVFVLCAPDIPFDQDGTRRDQAFR 304
Query 280 GTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEEL 318
E+ L A G ++V + G +ER+ +E L
Sbjct 305 QQQHDWYEEQLSAMGATWVEVQGDVQERMRQVGTCLERL 343
>gi|253988003|ref|YP_003039359.1| nicotinamide-nucleotide adenylyltransferase [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253779453|emb|CAQ82614.1| transcriptional regulator nadr [Photorhabdus asymbiotica]
Length=417
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/348 (28%), Positives = 169/348 (49%), Gaps = 30/348 (8%)
Query 2 THGMVLGKFMPPHAGHVYLCEFARRWVDELTIV------------VGSTAAEPIPGAQRV 49
T G++ GKF P H GH+YL + A VDEL ++ V S+ ++ + R+
Sbjct 65 TVGVIFGKFYPLHTGHIYLIQRAYSQVDELHVILCHDEPRDRELFVNSSMSQQPTVSDRL 124
Query 50 AWMRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNAD 106
W+ + F + + +H+ + + Q +P WD+W ++ ++ + P +++ +E +A
Sbjct 125 RWLLQTFKYQKNIHIHSFDEQGIEPYPHGWDVWSKGMKAFMSNKGINPSYIYSSETQDAS 184
Query 107 -FAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGK 165
+ + LG V +D R+ + ++ IR DP HW++IP V+P FV+ V+I+G ES+GK
Sbjct 185 RYKEQLGIETVLIDPQRSFMKISGRQIRQDPFRHWEYIPTEVKPFFVRTVAILGGESSGK 244
Query 166 TTLAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDAD 220
+TL +A T W R + L GG + L++++ I GQ + + A+
Sbjct 245 STLVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAIKYAN 303
Query 221 RVLICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG 277
+V DTD + T + + G Q L D R +DL +L + PW AD R +
Sbjct 304 KVTFVDTDFVTTQAFCKRYEGREHPFVQALIDEYR--FDLVILLENNTPWIADGLRSLGS 361
Query 278 --ARGTFFARCEQALRAAGRSFVVITG-GWEERLSVSLRAVEELVRAR 322
R F E L+ +V + +E+R + +++L+ A
Sbjct 362 DQDRKEFQQLLEYMLKNNNIEYVNVDSPDYEQRFLRCIELIQQLLAAN 409
>gi|292489441|ref|YP_003532328.1| nadAB transcriptional regulator [Erwinia amylovora CFBP1430]
gi|292898344|ref|YP_003537713.1| transcriptional regulator [Erwinia amylovora ATCC 49946]
gi|291198192|emb|CBJ45298.1| transcriptional regulator [Erwinia amylovora ATCC 49946]
gi|291554875|emb|CBA22781.1| probable nadAB transcriptional regulator [Erwinia amylovora CFBP1430]
gi|312173608|emb|CBX81862.1| probable nadAB transcriptional regulator [Erwinia amylovora ATCC
BAA-2158]
Length=410
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/348 (30%), Positives = 171/348 (50%), Gaps = 30/348 (8%)
Query 2 THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRV 49
T G+V+GKF P H GH+YL + A VDEL I++G S ++ + R+
Sbjct 65 TIGVVVGKFYPLHTGHIYLIQRACSQVDELHIIMGYDEQRDRKLFEDSAMSQQPTVSDRL 124
Query 50 AWMRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA- 105
W+ + F + + +H+ + N + +P WD+W A +Q +A R D ++ +E +A
Sbjct 125 RWLLQTFKYQKNIHIHSFNEEGMEPYPHGWDVWSAGIQEFMADRGIIADLIYTSEEADAP 184
Query 106 DFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGK 165
F LG V +D R+ + ++ IR DP +W++IP V+P FV+ V+I+G ES+GK
Sbjct 185 QFRAHLGVETVLIDPQRSFMNISGGQIRQDPFHYWEYIPTEVKPFFVRTVAILGGESSGK 244
Query 166 TTLAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDAD 220
+TL +A T W R + L GG + L++++ I GQ + + A+
Sbjct 245 STLVNKLANIFNTTSAWEFGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKYAN 303
Query 221 RVLICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG 277
RV DTD + T + + G Q + D R +DL +L +VPW AD R +
Sbjct 304 RVAFIDTDFVTTQAFCKKYEGREHPFVQAMIDEYR--FDLVILVENNVPWVADGLRSLGS 361
Query 278 A--RGTFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRAR 322
+ R F A L +V V ++ER + V+E++ A+
Sbjct 362 SVDRKEFQALLITMLEENNIRYVQVKQDNYDERFLRCVELVKEMLGAQ 409
>gi|238794797|ref|ZP_04638399.1| Transcriptional regulator nadR [Yersinia intermedia ATCC 29909]
gi|238725877|gb|EEQ17429.1| Transcriptional regulator nadR [Yersinia intermedia ATCC 29909]
Length=424
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/345 (29%), Positives = 170/345 (50%), Gaps = 30/345 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVV------------GSTAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL I++ S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHIILCFDEPRDRELFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ + + +P WD+W ++G + + P+F++ +E +A +
Sbjct 127 LLQTFKYQKNIHIHSFDEHGIEPYPHGWDVWSHGVKGFMNEKGIVPNFIYSSESQDAPHY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ G + +D R+ + ++ IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 NEQFGIETILIDPQRSFMNISGRQIRRDPFRYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYVDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGAR 279
DTD + T + + G Q L D R +DL +L + PW AD R + R
Sbjct 306 AFIDTDFVTTQAFCKKYEGKEHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGSDR 363
Query 280 G--TFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
+F EQ LR+ +V V + ++ER + V++L+ A
Sbjct 364 DRKSFQNLLEQMLRSNNIEYVHVESADYDERFLRCVELVQQLLAA 408
>gi|188532821|ref|YP_001906618.1| nicotinamide-nucleotide adenylyltransferase [Erwinia tasmaniensis
Et1/99]
gi|188027863|emb|CAO95720.1| Transcriptional regulator NadR [Erwinia tasmaniensis Et1/99]
Length=408
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/349 (31%), Positives = 170/349 (49%), Gaps = 34/349 (9%)
Query 2 THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRV 49
T G+V GKF P H GH+YL + A VDEL I++G S ++ + R+
Sbjct 65 TIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGYDEPRDRQLFEESAMSQQPTVSDRL 124
Query 50 AWMRELFPFDRVV--HLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYN 104
W+ + F + + + H NE P+ H WD+W +Q +A R PD ++ +E +
Sbjct 125 RWLLQTFKYQKNIRIHSFNEEGMEPYPHG--WDVWSPGIQEFMADRGIIPDLIYTSEEAD 182
Query 105 A-DFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPEST 163
A F LG V +D R+ + ++ IR DP +W++IP V+P FV+ V+I+G ES+
Sbjct 183 APQFRAHLGVEAVLIDPTRSFMNISGGQIRQDPFRYWEYIPTEVKPFFVRTVAILGGESS 242
Query 164 GKTTLAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARD 218
GK+TL +A T W R + L GG + L++++ I GQ + +
Sbjct 243 GKSTLVNKLANIFNTTSAWEFGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKY 301
Query 219 ADRVLICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCV 275
A++V DTD + T + + G Q L D R +DL +L +VPW AD R +
Sbjct 302 ANKVAFVDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILVENNVPWVADGLRSL 359
Query 276 PGA--RGTFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
+ R F A L G S++ V ++ER + V+E++ A
Sbjct 360 GSSVDRREFQALLVSMLEENGISYIHVDQDNYDERFLRCVDLVKEMLGA 408
>gi|83649599|ref|YP_438034.1| NAD metabolism ATPase/kinase [Hahella chejuensis KCTC 2396]
gi|83637642|gb|ABC33609.1| predicted ATPase/kinase involved in NAD metabolism [Hahella chejuensis
KCTC 2396]
Length=333
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/312 (33%), Positives = 150/312 (49%), Gaps = 8/312 (2%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVV-GSTAAEPIPGAQRVAWMRELFPFDRVV 62
G+ LGKF P H GH YL E A VD L +++ G +P +R +W++ L+P D V
Sbjct 13 GLTLGKFAPLHKGHQYLIEQALEQVDHLLVMIYGCPDVIEVPLERRASWIKALYP-DAEV 71
Query 63 HLANENPQRPWEHPDFWDIWKASLQGVLATRP-DFVFGAEPYNADFAQVLGARFVAVDHG 121
LA + PQ + P+ + + LA R F +E Y ++ L A+ VD
Sbjct 72 ILAPDGPQEVGDTPEICRKQEEYIGQCLAGRQVTHFFCSEFYGDHVSRYLNAQDCRVDEA 131
Query 122 RTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWV 181
R +VP++AT +R +P + V VK+V +G STGKTTLA+A+A + T+W+
Sbjct 132 RKIVPISATQVRKNPFAARDWVHPLVYRDLVKKVVFLGAPSTGKTTLAEAMAARFNTQWM 191
Query 182 PERAKMLRELNGGS--LIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFL 239
PE + E N L+ + EI +G + EE L D+DR L DT+ L T +A +
Sbjct 192 PEYGREYWEENQIERRLVPEQLVEIAQGHLQREEKLLLDSDRYLFVDTNALTTRHFAHYY 251
Query 240 AGGCPQELR---DLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRS 296
G EL D A + YD L D+P++ R R F L
Sbjct 252 HGFALPELERLADAATQRYDHVFLCADDIPYEDTWDRSGEVNRADFQQEIIAELERRNIE 311
Query 297 FVVITGGWEERL 308
+V++ G E R+
Sbjct 312 YVLLRGDVEARI 323
>gi|225020513|ref|ZP_03709705.1| hypothetical protein CORMATOL_00520 [Corynebacterium matruchotii
ATCC 33806]
gi|224946902|gb|EEG28111.1| hypothetical protein CORMATOL_00520 [Corynebacterium matruchotii
ATCC 33806]
Length=328
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/271 (33%), Positives = 133/271 (50%), Gaps = 10/271 (3%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVVH 63
+V+GKF PPH GH +L + A R D + ++V E IP R W+ + P V
Sbjct 8 SVVIGKFYPPHVGHHHLIDTALRNSDHVDVLVVDNPGEKIPAEHRRDWLAAVHPDANVRV 67
Query 64 LANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVLGARFVAVDHGRT 123
+ + D W A L PD VF +E Y +A +GA ++VDH R
Sbjct 68 IPDIGKD------DDSIAWAAHTTKFLHYVPDAVFTSETYGDTWAYHMGATHISVDHNRN 121
Query 124 VVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPE 183
P++ T IRAD G+WQ++ VR R+ ++G ESTG TTL +A+AE+L +WVPE
Sbjct 122 RYPISGTKIRADLFGNWQYLSDPVRAGLAARIVVVGAESTGTTTLTRAIAEELGVEWVPE 181
Query 184 RAKMLRE---LNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLA 240
+ E + ++ I Q E +A +D V+ICDT+ AT W
Sbjct 182 VGRYYTESILTTDYTWTDDDFHRIGNLQQQYENTMAARSDGVIICDTNAWATLQWQRRYL 241
Query 241 GGCPQELRDLARRP-YDLTLLTTPDVPWDAD 270
G +R++A R DL ++T ++P+ D
Sbjct 242 GHVTDTMRNIANRDRADLYIITGDEIPFVQD 272
>gi|226311115|ref|YP_002771009.1| nicotinamide mononucleotide adenylyltransferase/ribosylnicotinamide
kinase [Brevibacillus brevis NBRC 100599]
gi|226094063|dbj|BAH42505.1| putative nicotinamide mononucleotide adenylyltransferase/ribosylnicotinamide
kinase [Brevibacillus brevis NBRC 100599]
Length=352
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/340 (32%), Positives = 171/340 (51%), Gaps = 24/340 (7%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGST-----------AAEPIPGAQRVAWM 52
G + GKF+P H GHVY A DEL +V+ + IP R+ W+
Sbjct 5 GFIGGKFLPLHQGHVYAITQAACRCDELYVVLSHSPTRDRKLCEEAGIRSIPYEVRLRWL 64
Query 53 RELFP-FDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEP-YNADFAQV 110
L + V LA E+ E D W+ A ++ + + D VF +E Y+ F ++
Sbjct 65 STLVKDMENVRVLAVEDLADSDESYD-WEAGAADIKREIGKKIDLVFSSESAYDPIFRRL 123
Query 111 L-GARFVAVDHGRTVVPVTATDIRADPL-GHWQHIPRCVRPAFVKRVSIIGPESTGKTTL 168
A + +D R+ VP++AT IR + + HWQHIP V+P FVK+V ++G ES GK+TL
Sbjct 124 YPEAAHIILDESRSQVPISATQIRNEGVFAHWQHIPAIVQPYFVKKVVMVGTESCGKSTL 183
Query 169 AQAVAEKLRTKWVPERAKMLRELNGG--SLIGLEWA-EIVRGQIASEEALARDADRVLIC 225
+ +A+ T +V E + + E GG +++ E+ I G E + A+++L
Sbjct 184 TRYLAKIYNTMFVEEYGRTICEEVGGCDTILTPEYFPHIAYGHKMEEYKALQQANKLLFI 243
Query 226 DTDPLATTVWAEFLAGGCPQELRDLAR-RPYDLTLLTTPDVPWDADDGRCVPG---ARGT 281
DT+ + T ++E G L +A+ + YDL LL PDV W DDG V G R
Sbjct 244 DTEAIVTQFYSELYTGQTFPVLDQIAKEQAYDLWLLMEPDVAW-VDDGLRVHGDEQVRLH 302
Query 282 FFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRA 321
+ + L G ++V + G + ERL +++ V++L++A
Sbjct 303 NHEKLRKMLDDRGITYVTLRGNYAERLQGAMQHVDQLLKA 342
>gi|157368913|ref|YP_001476902.1| nicotinamide-nucleotide adenylyltransferase [Serratia proteamaculans
568]
gi|157320677|gb|ABV39774.1| transcriptional regulator, XRE family [Serratia proteamaculans
568]
Length=419
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/345 (29%), Positives = 170/345 (50%), Gaps = 30/345 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVV------------GSTAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL +++ S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ + + Q +P W++W ++ L + P F++ +E +A +
Sbjct 127 LLQTFKYQKNIHIHSFDEQGIEPYPHGWNVWSDGVKAFLEQKAIVPSFIYSSEAQDAPRY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ LG V +D R+ + ++ IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 REHLGIETVLIDPERSFMNISGRQIRQDPFLYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYVDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCV--PG 277
DTD + T + + G Q L D R +DL +L + PW AD R + P
Sbjct 306 AFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGNPK 363
Query 278 ARGTFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
R F E+ LRA +V V + ++ER + V++L+ A
Sbjct 364 DRKVFQHLLEEMLRANNIEYVHVESSDYDERFLRCVELVKQLLAA 408
>gi|332160215|ref|YP_004296792.1| nicotinamide-nucleotide adenylyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318607219|emb|CBY28717.1| nadr transcriptional regulator; Nicotinamide-nucleotide adenylyltransferase,
NadR family; Ribosylnicotinamide kinase [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664445|gb|ADZ41089.1| nicotinamide-nucleotide adenylyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330860096|emb|CBX70420.1| transcriptional regulator nadR [Yersinia enterocolitica W22703]
Length=427
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/347 (29%), Positives = 171/347 (50%), Gaps = 34/347 (9%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVV------------GSTAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL I++ S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHIILCYDEPRDLELFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLA--NENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA- 105
+ + F + + +H+ +EN P+ H WD+W ++ + + P+F++ +E +A
Sbjct 127 LLQTFKYQKNIHIHSFDENGIEPYPHG--WDVWSLGVKKFMNEKGIVPNFIYSSESQDAP 184
Query 106 DFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGK 165
+ + G + +D R+ + ++ IR DP +W +IP V+P FV+ V+I+G ES+GK
Sbjct 185 HYREQFGIETILIDPERSFMNISGRQIRRDPFRYWDYIPTEVKPFFVRTVAILGGESSGK 244
Query 166 TTLAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDAD 220
+TL +A T W R + L GG + L++++ I GQ + + A+
Sbjct 245 STLVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYVDFAVKYAN 303
Query 221 RVLICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG 277
+V DTD + T + + G Q L D R +DL +L + PW AD R +
Sbjct 304 KVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGS 361
Query 278 ARG--TFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
R +F EQ LR+ +V V + ++ER + V++L+ A
Sbjct 362 ERDRKSFQNLLEQMLRSNNIEYVHVESADYDERFLRCVELVQQLLAA 408
>gi|261819874|ref|YP_003257980.1| nicotinamide-nucleotide adenylyltransferase [Pectobacterium wasabiae
WPP163]
gi|261603887|gb|ACX86373.1| transcriptional regulator, XRE family [Pectobacterium wasabiae
WPP163]
Length=417
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/343 (29%), Positives = 166/343 (49%), Gaps = 30/343 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL +++G S+ ++ + R+ W
Sbjct 67 GIVFGKFYPLHTGHIYLIQRACSQVDELHVILGYDEPRDRLLFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ N Q +P WD+W +Q + + P+FV+ +E +A +
Sbjct 127 LLQTFKYQKNIHIHAFNEQGMEPYPHGWDVWSKGIQAFMQEKSITPNFVYTSEEQDAAQY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ LG V +D R+ + ++ + IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 REHLGIEAVLIDPQRSFMNISGSQIRHDPFRYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG-- 277
DTD + T + + G Q L D R +DL +L + PW AD R +
Sbjct 306 AFIDTDFVTTQAFCKKYEGREHPFVQALVDEYR--FDLVILLENNTPWVADGLRSLGSTT 363
Query 278 ARGTFFARCEQALRAAGRSFVVIT-GGWEERLSVSLRAVEELV 319
AR F + L +V I ++ R + V++++
Sbjct 364 ARSEFQNLLKTMLAKNNIPYVYIKESDYDSRFLHCVELVQQML 406
>gi|238786631|ref|ZP_04630432.1| Transcriptional regulator nadR [Yersinia frederiksenii ATCC 33641]
gi|238724999|gb|EEQ16638.1| Transcriptional regulator nadR [Yersinia frederiksenii ATCC 33641]
Length=426
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/345 (28%), Positives = 169/345 (49%), Gaps = 30/345 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVV------------GSTAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL I++ S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHIILCFDEPRDRELFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ + + +P WD+W ++ + + P+F++ +E +A +
Sbjct 127 LLQTFKYQKNIHIHSFDEHGIEPYPHGWDVWSHGVKKFMGEKGIVPNFIYSSESQDAPHY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ G + +D R+ + ++ IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 HEQFGIETILIDPQRSFMNISGRQIRRDPFRYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYVDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGAR 279
DTD + T + + G Q L D R +DL +L + PW AD R + R
Sbjct 306 AFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGSDR 363
Query 280 G--TFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
+F EQ LR+ +V V + ++ER + V++L+ A
Sbjct 364 DRKSFQKLLEQMLRSNNIEYVHVESADYDERFLRCVELVQQLLAA 408
>gi|227114643|ref|ZP_03828299.1| nicotinamide-nucleotide adenylyltransferase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length=417
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/343 (29%), Positives = 166/343 (49%), Gaps = 30/343 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL +++G S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHVILGYDEPRDRLLFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ N Q +P WD+W +Q + + P+FV+ +E +A +
Sbjct 127 LLQTFKYQKNIHIHAFNEQGMEPYPHGWDVWSKGIQAFMQEKSITPNFVYTSEEQDAAQY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ LG V +D R+ + ++ + IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 REQLGIEAVLIDPQRSFMNISGSQIRHDPFRYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCV--PG 277
DTD + T + + G Q L D R +DL +L + PW AD R +
Sbjct 306 AFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGTTA 363
Query 278 ARGTFFARCEQALRAAGRSFVVIT-GGWEERLSVSLRAVEELV 319
AR F + L +V I ++ R + V++++
Sbjct 364 ARSEFQELLKTMLANNNIPYVYIKESDYDSRFLHCVELVQQML 406
>gi|253686850|ref|YP_003016040.1| transcriptional regulator, XRE family [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753428|gb|ACT11504.1| transcriptional regulator, XRE family [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length=417
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/343 (29%), Positives = 166/343 (49%), Gaps = 30/343 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL +++G S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHVILGYDEPRDRLLFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ N Q +P WD+W +Q + + P+FV+ +E +A +
Sbjct 127 LLQTFKYQKNIHIHAFNEQGMEPYPHGWDVWSKGIQAFMQEKSITPNFVYTSEEQDAPQY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ LG V +D R+ + ++ + IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 REHLGIEAVLIDPQRSFMNISGSQIRHDPFRYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG-- 277
DTD + T + + G Q L D R +DL +L + PW AD R +
Sbjct 306 AFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGSTT 363
Query 278 ARGTFFARCEQALRAAGRSFVVIT-GGWEERLSVSLRAVEELV 319
AR F + L +V I ++ R + V++++
Sbjct 364 ARSEFQNLLKTMLADNNIQYVYIKESDYDSRFLHCVELVQQML 406
>gi|227326500|ref|ZP_03830524.1| nicotinamide-nucleotide adenylyltransferase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length=417
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/343 (29%), Positives = 166/343 (49%), Gaps = 30/343 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL +++G S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHVILGYDEPRDRLLFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ N Q +P WD+W +Q + + P+FV+ +E +A +
Sbjct 127 LLQTFKYQKNIHIHAFNEQGMEPYPHGWDVWSKGIQAFMQEKSITPNFVYTSEEQDAAQY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ LG V +D R+ + ++ + IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 REQLGIESVLIDPQRSFMNISGSQIRHDPFRYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG-- 277
DTD + T + + G Q L D R +DL +L + PW AD R +
Sbjct 306 AFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGSTT 363
Query 278 ARGTFFARCEQALRAAGRSFVVIT-GGWEERLSVSLRAVEELV 319
AR F + L +V I ++ R + V++++
Sbjct 364 ARSEFQDLLKTMLANNNIPYVYIKESDYDSRFLHCVELVQQML 406
>gi|238752646|ref|ZP_04614118.1| Transcriptional regulator nadR [Yersinia rohdei ATCC 43380]
gi|238709160|gb|EEQ01406.1| Transcriptional regulator nadR [Yersinia rohdei ATCC 43380]
Length=422
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/345 (29%), Positives = 169/345 (49%), Gaps = 30/345 (8%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVV------------GSTAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL I++ S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHIILCFDEPRDRELFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA-DF 107
+ + F + + +H+ + + +P WD+W ++ +A + P F++ +E +A +
Sbjct 127 LLQTFKYQKNIHIHSFDEHGIEPYPHGWDVWSRGVKTFMAEKGIVPSFIYSSESQDAPHY 186
Query 108 AQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTT 167
+ G + +D R+ + ++ IR DP +W +IP V+P FV+ V+I+G ES+GK+T
Sbjct 187 REQFGIETILIDPERSFMNISGRQIRRDPFRYWDYIPTEVKPFFVRTVAILGGESSGKST 246
Query 168 LAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDADRV 222
L +A T W R + L GG + L++++ I GQ + + A++V
Sbjct 247 LVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYVDFAVKYANKV 305
Query 223 LICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGAR 279
DTD + T + + G Q L D R +DL +L + PW AD R + R
Sbjct 306 AFIDTDFVTTQAFCKKYEGQEHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGSDR 363
Query 280 G--TFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
+F EQ LR+ +V V + ++ER + V++L+ A
Sbjct 364 DRKSFQNLLEQMLRSNNIEYVHVESADYDERFLHCVELVKQLLAA 408
>gi|238758574|ref|ZP_04619750.1| Transcriptional regulator nadR [Yersinia aldovae ATCC 35236]
gi|238703274|gb|EEP95815.1| Transcriptional regulator nadR [Yersinia aldovae ATCC 35236]
Length=425
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/347 (29%), Positives = 170/347 (49%), Gaps = 34/347 (9%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVV------------GSTAAEPIPGAQRVAW 51
G+V GKF P H GH+YL + A VDEL I++ S+ ++ + R+ W
Sbjct 67 GVVFGKFYPLHTGHIYLIQRACSQVDELHIILCYDEPRDLELFENSSMSQQPTVSDRLRW 126
Query 52 MRELFPFDRVVHLA--NENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYNA- 105
+ + F + + +H+ +EN P+ H WD+W + + + P+F++ +E +A
Sbjct 127 LLQTFKYQKNIHIHSFDENGIEPYPHG--WDVWSRGVNKFMNEKGITPNFIYSSESQDAP 184
Query 106 DFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGK 165
+ + G + +D R+ + ++ IR DP +W +IP V+P FV+ V+I+G ES+GK
Sbjct 185 HYNEQFGIETILIDPQRSFMNISGRQIRRDPFRYWDYIPTEVKPFFVRTVAILGGESSGK 244
Query 166 TTLAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARDAD 220
+TL +A T W R + L GG + L++++ I GQ + + A+
Sbjct 245 STLVNKLANIFNTTSAWEYGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYVDFAVKYAN 303
Query 221 RVLICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPG 277
+V DTD + T + + G Q L D R +DL +L + PW AD R +
Sbjct 304 KVAFIDTDFVTTQAFCKKYEGKEHPFVQALIDEYR--FDLVILLENNTPWVADGLRSLGS 361
Query 278 ARG--TFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
R +F + EQ LR+ +V V + ++ R + V++L+ A
Sbjct 362 DRDRKSFQSLLEQMLRSNNIEYVHVESADYDTRFLRCVELVQQLLAA 408
>gi|300715204|ref|YP_003740007.1| transcriptional regulator NadR [Erwinia billingiae Eb661]
gi|299061040|emb|CAX58147.1| Transcriptional regulator NadR [Erwinia billingiae Eb661]
Length=408
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/349 (30%), Positives = 167/349 (48%), Gaps = 34/349 (9%)
Query 2 THGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVG------------STAAEPIPGAQRV 49
T G+V GKF P H GH+YL + A VDEL I++G S ++ + R+
Sbjct 65 TIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGYDEPRDRQLFEASAMSQQPTVSDRL 124
Query 50 AWMRELFPFDRVV--HLANENPQRPWEHPDFWDIWKASLQGVLATR---PDFVFGAEPYN 104
W+ + F + + + H NE P+ H WD+W + + P+ V+ +E ++
Sbjct 125 RWLLQTFKYQKNIRIHSFNEEGMEPYPHG--WDVWSRGINDFMENHGIVPNRVYTSEEFD 182
Query 105 A-DFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPEST 163
A + Q LG V VD R+ + ++ IR DP +W++IP V+P FV+ V+I+G ES+
Sbjct 183 APQYQQHLGIEAVVVDAKRSFMSISGAQIRHDPFRYWEYIPTEVKPFFVRTVAILGGESS 242
Query 164 GKTTLAQAVAEKLRTK--WVPERAKMLRELNGGSLIGLEWAE---IVRGQIASEEALARD 218
GK+TL +A T W R + L GG + L++++ I GQ + +
Sbjct 243 GKSTLVNKLANIFNTTSAWEFGRDYVFSHL-GGDEMALQYSDYDKIALGQAQYIDFAVKY 301
Query 219 ADRVLICDTDPLATTVWAEFLAGG---CPQELRDLARRPYDLTLLTTPDVPWDADDGRCV 275
A++V DTD + T + + G Q L D R +DL +L +VPW AD R +
Sbjct 302 ANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYR--FDLVILVENNVPWVADGLRSL 359
Query 276 PGA--RGTFFARCEQALRAAGRSFV-VITGGWEERLSVSLRAVEELVRA 321
+ R F L S+V V ++ER + V+E++ A
Sbjct 360 GSSVDRKEFQTLLVSMLEENNISYVHVEQDSYDERFLRCVELVKEMLGA 408
>gi|344205755|ref|YP_004790896.1| putative transcriptional regulator NadR [Burkholderia sp. JV3]
gi|343777117|gb|AEM49670.1| putative transcriptional regulator NadR [Burkholderia sp. JV3]
Length=357
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/328 (33%), Positives = 147/328 (45%), Gaps = 22/328 (6%)
Query 4 GMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVA-WMRELFPFDRVV 62
G+V+GKF P H GH L +FA +L ++ S A+R W+R FP V
Sbjct 10 GLVVGKFCPLHLGHERLIDFAATRCQQLLVIGWSQPGFAGYSAERRERWLRARFPQATVA 69
Query 63 HLANEN---------------PQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADF 107
L + PQ + D + V+ E Y F
Sbjct 70 VLDDARLAALCMQHGLPVRALPQDSDDEQVQRDFTAWLCLNLFGGPVQAVYTGEDYGDGF 129
Query 108 AQVLGARF-VAVDHGR-----TVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPE 161
AQ L F V H R V T +RADP H + V P +V+RV+ IG E
Sbjct 130 AQALATHFGTPVRHERLERALDVGQACGTQLRADPHAHRHSLSAEVYPDYVQRVAFIGGE 189
Query 162 STGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADR 221
S+GKTTLA+ +A +L+T WVPE + L E GG L + I Q E+ +AR A R
Sbjct 190 SSGKTTLARVLAGRLQTAWVPEYGRTLWEQQGGELTPDDLLRIAMTQPQHEDEVARRAHR 249
Query 222 VLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGT 281
L CDT P T ++ ++ G P+ LR ARR YDL L PD+P+D D R R
Sbjct 250 WLFCDTTPRVTLGYSGWMFGTAPEPLRQAARRRYDLLFLCAPDIPFDQDGTRVGEAFRSQ 309
Query 282 FFARCEQALRAAGRSFVVITGGWEERLS 309
A L+A +V++ G E R++
Sbjct 310 QHAWYLAQLQAEDVEYVLLEGDLETRIA 337
Lambda K H
0.323 0.138 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 570943570224
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40