BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0214 Length=537 Score E Sequences producing significant alignments: (Bits) Value gi|15607355|ref|NP_214728.1| long-chain-fatty-acid--CoA ligase [... 1105 0.0 gi|289747981|ref|ZP_06507359.1| fatty-acid-CoA ligase fadD4 [Myc... 1103 0.0 gi|31791392|ref|NP_853885.1| acyl-CoA synthetase [Mycobacterium ... 1103 0.0 gi|289441590|ref|ZP_06431334.1| fatty-acid-CoA ligase fadD4 [Myc... 1095 0.0 gi|289748690|ref|ZP_06508068.1| fatty-acid-CoA ligase fadD4 [Myc... 1093 0.0 gi|167968788|ref|ZP_02551065.1| acyl-CoA synthetase [Mycobacteri... 1040 0.0 gi|183980483|ref|YP_001848774.1| fatty-acid-CoA ligase FadD4 [My... 884 0.0 gi|254818286|ref|ZP_05223287.1| long-chain-fatty-acid--CoA ligas... 872 0.0 gi|240168423|ref|ZP_04747082.1| acyl-CoA synthetase [Mycobacteri... 872 0.0 gi|296167436|ref|ZP_06849835.1| bile acid-coenzyme A ligase [Myc... 860 0.0 gi|342859331|ref|ZP_08715985.1| long-chain-fatty-acid--CoA ligas... 844 0.0 gi|254777400|ref|ZP_05218916.1| long-chain-fatty-acid--CoA ligas... 840 0.0 gi|336460046|gb|EGO38955.1| acyl-CoA synthetase (AMP-forming)/AM... 839 0.0 gi|118465342|ref|YP_884082.1| long-chain-fatty-acid--CoA ligase ... 838 0.0 gi|41409747|ref|NP_962583.1| acyl-CoA synthetase [Mycobacterium ... 837 0.0 gi|118469180|ref|YP_884672.1| long-chain-fatty-acid--CoA ligase ... 813 0.0 gi|126432779|ref|YP_001068470.1| long-chain-fatty-acid--CoA liga... 811 0.0 gi|120401244|ref|YP_951073.1| long-chain-fatty-acid--CoA ligase ... 811 0.0 gi|108797157|ref|YP_637354.1| long-chain-fatty-acid--CoA ligase ... 808 0.0 gi|333988818|ref|YP_004521432.1| fatty-acid-CoA ligase [Mycobact... 799 0.0 gi|145221053|ref|YP_001131731.1| long-chain-fatty-acid--CoA liga... 790 0.0 gi|254819953|ref|ZP_05224954.1| acyl-CoA synthetase [Mycobacteri... 743 0.0 gi|126436733|ref|YP_001072424.1| acyl-CoA synthetase [Mycobacter... 742 0.0 gi|118467099|ref|YP_881739.1| acyl-CoA synthetase [Mycobacterium... 741 0.0 gi|333992425|ref|YP_004525039.1| fatty-acid-CoA ligase [Mycobact... 728 0.0 gi|254822206|ref|ZP_05227207.1| acyl-CoA synthetase [Mycobacteri... 648 0.0 gi|289568117|ref|ZP_06448344.1| fatty-acid-CoA ligase fadD4 [Myc... 590 2e-166 gi|296269878|ref|YP_003652510.1| AMP-dependent synthetase and li... 521 1e-145 gi|254514058|ref|ZP_05126119.1| AMP-dependent synthetase and lig... 507 2e-141 gi|271964753|ref|YP_003338949.1| AMP-dependent synthetase and li... 503 3e-140 gi|88703611|ref|ZP_01101327.1| AMP-binding enzyme [Congregibacte... 501 1e-139 gi|148554681|ref|YP_001262263.1| long-chain-fatty-acid--CoA liga... 501 1e-139 gi|103485717|ref|YP_615278.1| AMP-dependent synthetase and ligas... 496 4e-138 gi|154251304|ref|YP_001412128.1| AMP-dependent synthetase and li... 496 5e-138 gi|194291366|ref|YP_002007273.1| acyl-CoA synthetase [Cupriavidu... 491 2e-136 gi|87201173|ref|YP_498430.1| long-chain-fatty-acid--CoA ligase [... 488 1e-135 gi|167645312|ref|YP_001682975.1| long-chain-fatty-acid--CoA liga... 487 3e-135 gi|254481258|ref|ZP_05094503.1| AMP-binding enzyme, putative [ma... 486 4e-135 gi|295690709|ref|YP_003594402.1| AMP-dependent synthetase and li... 486 4e-135 gi|334342883|ref|YP_004555487.1| o-succinylbenzoate--CoA ligase ... 485 7e-135 gi|16125196|ref|NP_419760.1| acyl-CoA synthetase [Caulobacter cr... 485 9e-135 gi|103486402|ref|YP_615963.1| AMP-dependent synthetase and ligas... 483 5e-134 gi|329894367|ref|ZP_08270237.1| Long-chain-fatty-acid--CoA ligas... 482 6e-134 gi|119503304|ref|ZP_01625388.1| acyl-CoA synthase [marine gamma ... 482 8e-134 gi|111020945|ref|YP_703917.1| long-chain-fatty-acid--CoA ligase ... 481 1e-133 gi|54025067|ref|YP_119309.1| long-chain-fatty-acid--CoA ligase [... 481 1e-133 gi|85375292|ref|YP_459354.1| long-chain-fatty-acid--CoA ligase [... 481 1e-133 gi|316935138|ref|YP_004110120.1| AMP-dependent synthetase and li... 481 2e-133 gi|39934772|ref|NP_947048.1| long-chain-fatty-acid--CoA ligase [... 480 3e-133 gi|192290295|ref|YP_001990900.1| long-chain-fatty-acid--CoA liga... 479 4e-133 >gi|15607355|ref|NP_214728.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis H37Rv] gi|15839594|ref|NP_334631.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis CDC1551] gi|148659978|ref|YP_001281501.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra] 24 more sequence titles Length=537 Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/537 (99%), Positives = 537/537 (100%), Gaps = 0/537 (0%) Query 1 LPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 +PRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL Sbjct 1 MPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 Query 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY Sbjct 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 Query 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI Sbjct 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 Query 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH Sbjct 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 Query 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS Sbjct 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 Query 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG Sbjct 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 Query 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL Sbjct 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 Query 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ Sbjct 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 Query 481 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV Sbjct 481 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 >gi|289747981|ref|ZP_06507359.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis 02_1987] gi|289688509|gb|EFD55997.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis 02_1987] Length=537 Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/537 (99%), Positives = 536/537 (99%), Gaps = 0/537 (0%) Query 1 LPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 +PRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL Sbjct 1 MPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 Query 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY Sbjct 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 Query 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI Sbjct 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 Query 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH Sbjct 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 Query 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS Sbjct 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 Query 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG Sbjct 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 Query 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL Sbjct 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 Query 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ Sbjct 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 Query 481 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 TVDSADANDQFAGELL WLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV Sbjct 481 TVDSADANDQFAGELLVWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 >gi|31791392|ref|NP_853885.1| acyl-CoA synthetase [Mycobacterium bovis AF2122/97] gi|121636126|ref|YP_976349.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988599|ref|YP_002643286.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Tokyo 172] 10 more sequence titles Length=537 Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/537 (99%), Positives = 536/537 (99%), Gaps = 0/537 (0%) Query 1 LPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 +PRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYI ADKPAVILYPSGTVISFDEL Sbjct 1 MPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIAADKPAVILYPSGTVISFDEL 60 Query 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY Sbjct 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 Query 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI Sbjct 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 Query 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH Sbjct 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 Query 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS Sbjct 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 Query 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG Sbjct 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 Query 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL Sbjct 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 Query 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ Sbjct 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 Query 481 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV Sbjct 481 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 >gi|289441590|ref|ZP_06431334.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis T46] gi|289414509|gb|EFD11749.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis T46] Length=534 Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/537 (99%), Positives = 534/537 (99%), Gaps = 3/537 (0%) Query 1 LPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 +PRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL Sbjct 1 MPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 Query 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY Sbjct 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 Query 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI Sbjct 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 Query 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH Sbjct 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 Query 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS Sbjct 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 Query 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG Sbjct 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 Query 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVT VGYL Sbjct 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVT---VGYL 417 Query 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ Sbjct 418 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 477 Query 481 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV Sbjct 478 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 534 >gi|289748690|ref|ZP_06508068.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis T92] gi|289689277|gb|EFD56706.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis T92] Length=534 Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 532/537 (99%), Positives = 533/537 (99%), Gaps = 3/537 (0%) Query 1 LPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 +PRGELYKRFRLVMGGIAPCGSGRRAA YPRRMQIRPYIGADKPAVILYPSGTVISFDEL Sbjct 1 MPRGELYKRFRLVMGGIAPCGSGRRAAMYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 Query 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY Sbjct 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 Query 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI Sbjct 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 Query 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH Sbjct 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 Query 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS Sbjct 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNS 300 Query 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG Sbjct 301 YDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG 360 Query 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYL 420 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVT VGYL Sbjct 361 KPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVT---VGYL 417 Query 421 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 480 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ Sbjct 418 DDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQ 477 Query 481 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV Sbjct 478 TVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 534 >gi|167968788|ref|ZP_02551065.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra] gi|254549153|ref|ZP_05139600.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294994688|ref|ZP_06800379.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis 210] 30 more sequence titles Length=505 Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/505 (100%), Positives = 505/505 (100%), Gaps = 0/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV Sbjct 1 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP Sbjct 61 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD Sbjct 121 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI Sbjct 181 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII Sbjct 241 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP Sbjct 301 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL Sbjct 361 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI Sbjct 421 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYSV 537 AFEPQLPRTDTGKLYKSGLVEKYSV Sbjct 481 AFEPQLPRTDTGKLYKSGLVEKYSV 505 >gi|183980483|ref|YP_001848774.1| fatty-acid-CoA ligase FadD4 [Mycobacterium marinum M] gi|183173809|gb|ACC38919.1| fatty-acid-CoA ligase FadD4 [Mycobacterium marinum M] Length=507 Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/506 (84%), Positives = 464/506 (92%), Gaps = 2/506 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR ++GADKPAVIL+PSGTV+SFDELEARANRLAH FR+AGLRE D VAILMENNEH+ Sbjct 1 MQIRQHVGADKPAVILHPSGTVVSFDELEARANRLAHRFRRAGLREGDAVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTA+EAAYI++NSGAKAIVGSAALR+TC GL EHL G P Sbjct 61 HAVMWAARRSGLYYVPINTHLTAAEAAYIIENSGAKAIVGSAALRDTCAGLGEHLRAGPP 120 Query 153 DLLMLAG--GGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVS 210 +LL+LAG G L GW YP+CVADQPDT I+DE EGDLLQYSSGTTGRPKGIKREL HV+ Sbjct 121 ELLILAGPEGCLTGWEPYPQCVADQPDTAIDDELEGDLLQYSSGTTGRPKGIKRELLHVA 180 Query 211 PDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALD 270 PDAAPGMM AL+ +WMDADS+YLSPAP+YHTAPSVW+MSA A G+TTVV+EKFD EGAL+ Sbjct 181 PDAAPGMMSALVGYWMDADSIYLSPAPLYHTAPSVWSMSAQAGGITTVVLEKFDPEGALE 240 Query 271 AIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGP 330 AIQR+RVTHAQFVPAMF RMLKLPE++RNSYD+SSL+RV+HAAAPCPV+IK+QM+ WWGP Sbjct 241 AIQRHRVTHAQFVPAMFTRMLKLPESIRNSYDVSSLKRVMHAAAPCPVEIKKQMMDWWGP 300 Query 331 IIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGG 390 IIDEYYASSEA GSTLITAEDWL HPGSVGKP+QGGVHI+GADG ELPP Q GEIYFEGG Sbjct 301 IIDEYYASSEAIGSTLITAEDWLEHPGSVGKPMQGGVHILGADGVELPPGQAGEIYFEGG 360 Query 391 YPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAEN 450 Y FEYLNDP+KTAASR+KHGWVTVGDVGYLDD GYLFLT RRHHMIISGGVNIYPQEAEN Sbjct 361 YSFEYLNDPSKTAASRDKHGWVTVGDVGYLDDQGYLFLTDRRHHMIISGGVNIYPQEAEN 420 Query 451 LLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPR 510 +LV HPKV+DAAVFGVPDDEMGQRVMA VQTVD ADA QF EL+ WLRDRLSHFKCPR Sbjct 421 ILVTHPKVMDAAVFGVPDDEMGQRVMAVVQTVDPADATSQFGDELMEWLRDRLSHFKCPR 480 Query 511 SIAFEPQLPRTDTGKLYKSGLVEKYS 536 S+AFE QLPRTDTGKLYK+GL+EKYS Sbjct 481 SVAFEAQLPRTDTGKLYKNGLIEKYS 506 >gi|254818286|ref|ZP_05223287.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare ATCC 13950] Length=509 Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/509 (83%), Positives = 456/509 (90%), Gaps = 4/509 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIRPYIGADKPAVILYPSGTV++FD+LEARANRLAH FRQAGLRE D VAILMENNEH+ Sbjct 1 MQIRPYIGADKPAVILYPSGTVVTFDDLEARANRLAHRFRQAGLREGDTVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTA+EAAYIVDNS AKAI+GSAALRETC GLAE LP GLP Sbjct 61 HAVMWAARRSGLYYVPINTHLTAAEAAYIVDNSAAKAIIGSAALRETCAGLAEQLPRGLP 120 Query 153 DLLMLAGG----GLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPH 208 +LL++A GL GW YPECVA QPDTPI+DE EGDLLQYSSGTTGRPKGIKRELPH Sbjct 121 ELLLIAAEKQDEGLPGWERYPECVAGQPDTPIDDEIEGDLLQYSSGTTGRPKGIKRELPH 180 Query 209 VSPDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGA 268 V P APGMM AL+ FWM DSVYLSPAP+YHTAPSVW+MSA A G+TTVVMEKFDAEG Sbjct 181 VPPADAPGMMSALVGFWMTPDSVYLSPAPLYHTAPSVWSMSAQAGGITTVVMEKFDAEGC 240 Query 269 LDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWW 328 LDAIQR+RVTH QFVPAMF RMLKLP+AVR+SYD+SSL+RV+HAAAPCPV+IK+QMI WW Sbjct 241 LDAIQRHRVTHGQFVPAMFTRMLKLPDAVRHSYDLSSLQRVMHAAAPCPVEIKKQMIDWW 300 Query 329 GPIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFE 388 GPIIDEYYASSEA GSTLITAEDWL HPGSVGKP+ G VHI+ +G ELPP Q GEIYFE Sbjct 301 GPIIDEYYASSEAHGSTLITAEDWLAHPGSVGKPMGGAVHILDENGDELPPGQAGEIYFE 360 Query 389 GGYPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEA 448 GGY FEYLNDP KTA+SR+KHGW TVGD+GY+DD+GYL+LT RRHHMIISGGVNIYPQEA Sbjct 361 GGYSFEYLNDPTKTASSRSKHGWATVGDIGYVDDEGYLYLTDRRHHMIISGGVNIYPQEA 420 Query 449 ENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKC 508 ENLLV HPKV+DAAVFGVPDDEMGQRV A VQTVD ADA D F ELLAWLRDRL+H+KC Sbjct 421 ENLLVTHPKVMDAAVFGVPDDEMGQRVTAVVQTVDPADATDAFGDELLAWLRDRLAHYKC 480 Query 509 PRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 PRSIAFE QLPRTDTGKLYK+GL+EKYSV Sbjct 481 PRSIAFEAQLPRTDTGKLYKNGLIEKYSV 509 >gi|240168423|ref|ZP_04747082.1| acyl-CoA synthetase [Mycobacterium kansasii ATCC 12478] Length=509 Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/505 (82%), Positives = 456/505 (91%), Gaps = 0/505 (0%) Query 32 RMQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEH 91 R +R A+KPAVIL+PSGTV++F ELEARANRLAH FR+AGLRE DVVAILMENNEH Sbjct 4 RQHLRDETSANKPAVILHPSGTVVTFAELEARANRLAHRFREAGLREGDVVAILMENNEH 63 Query 92 VHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGL 151 +HAVMWAARRSGLYYVPINTHL +EAAYIVDNS A+AIVGSAALRETC GLA HLPGGL Sbjct 64 IHAVMWAARRSGLYYVPINTHLAPAEAAYIVDNSSARAIVGSAALRETCAGLAGHLPGGL 123 Query 152 PDLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSP 211 P+LLM+A G L GW YPECVA QP TPI+DE EGDLLQYSSGTTGRPKGIKRELPHV P Sbjct 124 PELLMVADGDLAGWGRYPECVAGQPGTPIDDELEGDLLQYSSGTTGRPKGIKRELPHVPP 183 Query 212 DAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDA 271 D APGMM AL+D+WMD DSVYLSPAP+YHTAPSVW+MSA A G+TTVVMEKFD E ALDA Sbjct 184 DQAPGMMSALIDYWMDRDSVYLSPAPLYHTAPSVWSMSAQAGGITTVVMEKFDPESALDA 243 Query 272 IQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPI 331 IQRYRVTH QFVPAMF RMLKLP+ VRNSYD+SSL+RV+HAAAPCPV+IK+QM+ WWGPI Sbjct 244 IQRYRVTHGQFVPAMFTRMLKLPDRVRNSYDISSLKRVMHAAAPCPVEIKKQMMDWWGPI 303 Query 332 IDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGY 391 +DEYYASSEA GSTLITAEDWL HPGSVGKP+QG VHI+ DG+ELPP QPGEI+FEGGY Sbjct 304 VDEYYASSEAIGSTLITAEDWLAHPGSVGKPMQGAVHILDPDGNELPPGQPGEIFFEGGY 363 Query 392 PFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENL 451 FEYLNDP+KTAASR+KHGWVTVGD+GYLDD+GYL+LT RRHHMIISGGVNIYPQE EN+ Sbjct 364 SFEYLNDPSKTAASRDKHGWVTVGDIGYLDDEGYLYLTDRRHHMIISGGVNIYPQETENV 423 Query 452 LVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRS 511 LV HPKVLDAAVFGVPD+EMGQRVMAAVQTVD ADA ++FA ELLAWLR+RLSHFKCP++ Sbjct 424 LVTHPKVLDAAVFGVPDEEMGQRVMAAVQTVDPADATEEFAAELLAWLRNRLSHFKCPKA 483 Query 512 IAFEPQLPRTDTGKLYKSGLVEKYS 536 IAFE QLPRTDTGKLYK GL+EKYS Sbjct 484 IAFEVQLPRTDTGKLYKDGLIEKYS 508 >gi|296167436|ref|ZP_06849835.1| bile acid-coenzyme A ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897184|gb|EFG76791.1| bile acid-coenzyme A ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=505 Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/505 (83%), Positives = 458/505 (91%), Gaps = 0/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR Y+G+ KPAVIL+PSGTVI+FDELEARANRLAH+FR+AGL E D VAILMENNEH+ Sbjct 1 MQIREYLGSGKPAVILHPSGTVITFDELEARANRLAHYFRRAGLAEGDAVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTA+EAAYI+DNS AKAIVGSAALR+TC LAEHLP GLP Sbjct 61 HAVMWAARRSGLYYVPINTHLTAAEAAYIIDNSAAKAIVGSAALRKTCENLAEHLPDGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 LL++A L GW YPECVADQPDTPI+DEREGDLLQYSSGTTGRPKGIKRELPHV P Sbjct 121 GLLLIADDDLEGWARYPECVADQPDTPIDDEREGDLLQYSSGTTGRPKGIKRELPHVPPA 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 APGMM AL+ FWM+ DS+YLSPAP+YHTAPSVW+MSA A GVTTVV+EKFDAEG LDAI Sbjct 181 EAPGMMSALVSFWMNPDSIYLSPAPLYHTAPSVWSMSAQAGGVTTVVLEKFDAEGCLDAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 QR+RVTHAQFVPAMF RMLKLPE+VRNSYD+SSL+RV+HAAAPCPV+IK+QM+ WWGPII Sbjct 241 QRHRVTHAQFVPAMFTRMLKLPESVRNSYDVSSLQRVMHAAAPCPVEIKKQMMDWWGPII 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEA GSTLITAE+WL HPGSVGKP+ G VHI+ DG+ELPP Q GEIYFEGGY Sbjct 301 DEYYASSEAHGSTLITAEEWLAHPGSVGKPMGGAVHILDQDGNELPPGQAGEIYFEGGYS 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLNDP KTAASR+KHGW TVGD+GYLD++GYL+LT RRHHMIISGGVNIYPQEAENLL Sbjct 361 FEYLNDPTKTAASRDKHGWATVGDIGYLDEEGYLYLTDRRHHMIISGGVNIYPQEAENLL 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 V HPKVLDAAVFGVPDDEMGQRV+A VQTVD DA D+FA ELL WLRDRL+H+KCP+SI Sbjct 421 VTHPKVLDAAVFGVPDDEMGQRVLAVVQTVDPGDATDEFAAELLTWLRDRLAHYKCPKSI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYSV 537 AFE QLPRTDTGKLYK+GL+EKYSV Sbjct 481 AFEAQLPRTDTGKLYKNGLIEKYSV 505 >gi|342859331|ref|ZP_08715985.1| long-chain-fatty-acid--CoA ligase [Mycobacterium colombiense CECT 3035] gi|342133572|gb|EGT86775.1| long-chain-fatty-acid--CoA ligase [Mycobacterium colombiense CECT 3035] Length=505 Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/505 (82%), Positives = 455/505 (91%), Gaps = 0/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIRPY+GADKPAVILYPSGTV++FD+LEARANRLAH FR+AGLRE D VAILMENNEH+ Sbjct 1 MQIRPYVGADKPAVILYPSGTVVTFDDLEARANRLAHRFREAGLREGDTVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTA+EAAYI+DNS AKAI+GSAALR+T GL E LPGGLP Sbjct 61 HAVMWAARRSGLYYVPINTHLTAAEAAYIIDNSTAKAIIGSAALRDTLAGLGEQLPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 +LL++A G L GW YPECVA QPDTPI+DE EGDLLQYSSGTTGRPKGIKRELPHV P Sbjct 121 ELLLIADGDLPGWERYPECVAGQPDTPIDDEIEGDLLQYSSGTTGRPKGIKRELPHVPPA 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 APGMM AL+ FWM DS+YLSPAP+YHTAPSVW+MSA A G+TTVVMEKFDA+G LDAI Sbjct 181 EAPGMMSALVGFWMTPDSIYLSPAPLYHTAPSVWSMSAQAGGITTVVMEKFDAQGCLDAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 QR+RVTH QFVPAMF RMLKLPE VR+SYD++SL+RV+HAAAPCPV+IK+QMI WWGPI+ Sbjct 241 QRHRVTHGQFVPAMFTRMLKLPEQVRHSYDLTSLQRVMHAAAPCPVEIKKQMIDWWGPIV 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEA GSTLITAE+WL HPGSVGKP+ G VHI+ G+ELPP Q GEIYFEGGY Sbjct 301 DEYYASSEAHGSTLITAEEWLAHPGSVGKPMGGAVHILDEHGNELPPGQAGEIYFEGGYA 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLND AKTA+SR+KHGW TVGD+GYLDD+GYL+LT RRHHMIISGGVNIYPQEAENLL Sbjct 361 FEYLNDAAKTASSRDKHGWATVGDIGYLDDEGYLYLTDRRHHMIISGGVNIYPQEAENLL 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 V HPKVLDAAVFGVPDDEMGQRV+AAVQTVD ADA D FA EL AWLRDRL+H+KCPRSI Sbjct 421 VTHPKVLDAAVFGVPDDEMGQRVVAAVQTVDPADATDAFADELTAWLRDRLAHYKCPRSI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYSV 537 FE QLPRTDTGKLYK+GL+EKYSV Sbjct 481 DFEAQLPRTDTGKLYKNGLIEKYSV 505 >gi|254777400|ref|ZP_05218916.1| long-chain-fatty-acid--CoA ligase [Mycobacterium avium subsp. avium ATCC 25291] Length=505 Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/505 (82%), Positives = 456/505 (91%), Gaps = 0/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR Y+GA KPAVILYPSGTV++FD+LEARANRLAH FR+AGLRE D VAILMENNEH+ Sbjct 1 MQIREYLGAGKPAVILYPSGTVVTFDDLEARANRLAHRFRKAGLREGDTVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTA+EAAYIVDNS A+AIVGSAALR+TC + EHLPGGLP Sbjct 61 HAVMWAARRSGLYYVPINTHLTAAEAAYIVDNSSARAIVGSAALRDTCARIGEHLPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 DLL++A G L GW YPECVA +PDTPI+DE EGDLLQYSSGTTGRPKGIKRELPHV P Sbjct 121 DLLLMADGDLDGWERYPECVAGEPDTPIDDELEGDLLQYSSGTTGRPKGIKRELPHVHPA 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 APGMM AL+ FWM +S+YLSPAP+YHTAPSVW+MSA A G+TTVVMEKFDAEG LDAI Sbjct 181 EAPGMMSALVGFWMTPESIYLSPAPLYHTAPSVWSMSAQAGGITTVVMEKFDAEGCLDAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 QR+RVTH QFVPAMF RMLKLPEAVR+SYD+SSL+RV+HAAAPCPV+IK+QMI WWGPII Sbjct 241 QRHRVTHGQFVPAMFTRMLKLPEAVRHSYDLSSLQRVMHAAAPCPVEIKKQMIDWWGPII 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEA GSTLI+AE+WL HPGSVGKP+ +HI+ +G+ELPP Q GEIYF GGY Sbjct 301 DEYYASSEAIGSTLISAEEWLAHPGSVGKPMACEIHILDENGNELPPGQAGEIYFSGGYS 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLND AKTAASR+KHGWVTVGDVGY+D++GYL+LT RRHHMIISGGVNIYPQEAENLL Sbjct 361 FEYLNDEAKTAASRDKHGWVTVGDVGYVDEEGYLYLTDRRHHMIISGGVNIYPQEAENLL 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 V HPKVLDAAVFGVPDDEMGQRVMAAVQTVD DA D+F ELL+WLRDRL+H+KCPR+I Sbjct 421 VTHPKVLDAAVFGVPDDEMGQRVMAAVQTVDPGDATDEFGAELLSWLRDRLAHYKCPRAI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYSV 537 AFE QLPRTDTGKL+KSGL+EKYSV Sbjct 481 AFEEQLPRTDTGKLFKSGLIEKYSV 505 >gi|336460046|gb|EGO38955.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium avium subsp. paratuberculosis S397] Length=505 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/505 (81%), Positives = 456/505 (91%), Gaps = 0/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR Y+GA KPAVILYPSGTV++FD+LEARANRLAH FR+AGLRE D VAILMENNEH+ Sbjct 1 MQIREYLGAGKPAVILYPSGTVVTFDDLEARANRLAHRFRKAGLREGDTVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTA+EAAYIVDNS A+AIVGSAALR+TC + EHLPGGLP Sbjct 61 HAVMWAARRSGLYYVPINTHLTAAEAAYIVDNSSARAIVGSAALRDTCARIGEHLPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 DLL++A G L GW YPECVA +PDTPI+DE EGDLLQYSSGTTGRPKGIKRELPHV P Sbjct 121 DLLLMADGDLDGWEHYPECVAGEPDTPIDDELEGDLLQYSSGTTGRPKGIKRELPHVHPA 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 APGMM AL+ FWM +S+YLSPAP+YHTAPSVW+MSA A G+TTVVMEKFDAEG LDAI Sbjct 181 EAPGMMSALVGFWMTPESIYLSPAPLYHTAPSVWSMSAQAGGITTVVMEKFDAEGCLDAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 QR+RVTH QFVPAMF RMLKLPEAVR+SYD+SSL+RV+HAAAPCPV+IK+QMI WWGPII Sbjct 241 QRHRVTHGQFVPAMFTRMLKLPEAVRHSYDLSSLQRVMHAAAPCPVEIKKQMIDWWGPII 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEA GSTLI+AE+WL HPGSVGKP+ +HI+ +G+ELPP Q GEIYF GGY Sbjct 301 DEYYASSEAIGSTLISAEEWLAHPGSVGKPMACEIHILDENGNELPPGQAGEIYFSGGYS 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLND AKTAASR+KHGWVTVGDVGY+D++GYL+LT RRHHMIISGGVNIYPQEAENLL Sbjct 361 FEYLNDEAKTAASRDKHGWVTVGDVGYVDEEGYLYLTDRRHHMIISGGVNIYPQEAENLL 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 V HPKVLDAAVFGVPDDEMGQRVMAAVQTVD DA D+F ELL+WLRDRL+H+KCPR+I Sbjct 421 VTHPKVLDAAVFGVPDDEMGQRVMAAVQTVDPGDATDEFGAELLSWLRDRLAHYKCPRAI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYSV 537 AFE QLPRTDTGKL+K+GL+EKYSV Sbjct 481 AFEEQLPRTDTGKLFKNGLIEKYSV 505 >gi|118465342|ref|YP_884082.1| long-chain-fatty-acid--CoA ligase [Mycobacterium avium 104] gi|118166629|gb|ABK67526.1| acyl-CoA synthase [Mycobacterium avium 104] Length=505 Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/505 (81%), Positives = 455/505 (91%), Gaps = 0/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR Y+GA KPAVILYPSGTV++FD+LEARANRLAH FR+AGLRE D VAILMENNEH+ Sbjct 1 MQIREYLGAGKPAVILYPSGTVVTFDDLEARANRLAHRFRKAGLREGDTVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 H VMWAARRSGLYYVPINTHLTA+EAAYIVDNS A+AIVGSAALR+TC L EHLPGGLP Sbjct 61 HVVMWAARRSGLYYVPINTHLTAAEAAYIVDNSSARAIVGSAALRDTCARLGEHLPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 DLL++A G L GW YPECVA +PDTPI+DE EGDLLQYSSGTTGRPKGIKRELPHV P Sbjct 121 DLLLMADGDLDGWERYPECVAGEPDTPIDDELEGDLLQYSSGTTGRPKGIKRELPHVHPA 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 APGMM AL+ FWM +S+YLSPAP+YHTAPSVW+MSA A G+TTVVMEKFDAEG LDAI Sbjct 181 EAPGMMSALVGFWMTPESIYLSPAPLYHTAPSVWSMSAQAGGITTVVMEKFDAEGCLDAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 QR+RVTH QFVPAMF RMLKLPEAVR+SYD+SSL+RV+HAAAPCPV+IK+QMI WWGPII Sbjct 241 QRHRVTHGQFVPAMFTRMLKLPEAVRHSYDLSSLQRVMHAAAPCPVEIKKQMIDWWGPII 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEA GSTLI+AE+WL HPGSVGKP+ +HI+ +G+ELPP Q GEIYF GGY Sbjct 301 DEYYASSEAIGSTLISAEEWLAHPGSVGKPMACEIHILDENGNELPPGQAGEIYFSGGYS 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLND AKTAASR+KHGWVTVGDVGY+D++GYL+LT RRHHMIISGGVNIYPQEAENLL Sbjct 361 FEYLNDEAKTAASRDKHGWVTVGDVGYVDEEGYLYLTDRRHHMIISGGVNIYPQEAENLL 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 V HPKVLDAAVFGVPDDEMGQRVMAAVQTVD DA D+F ELL+WLRDRL+H+KCPR+I Sbjct 421 VTHPKVLDAAVFGVPDDEMGQRVMAAVQTVDPGDATDEFGAELLSWLRDRLAHYKCPRAI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYSV 537 AFE QLPRTDTGKL+K+GL+EKYSV Sbjct 481 AFEEQLPRTDTGKLFKNGLIEKYSV 505 >gi|41409747|ref|NP_962583.1| acyl-CoA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398579|gb|AAS06199.1| FadD4 [Mycobacterium avium subsp. paratuberculosis K-10] Length=505 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/505 (81%), Positives = 456/505 (91%), Gaps = 0/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR Y+GA KPAVILYPSGTV++FD+LEARANRLAH FR+AGLRE D VAILMENNEH+ Sbjct 1 MQIREYLGAGKPAVILYPSGTVVTFDDLEARANRLAHRFRKAGLREGDTVAILMENNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYYVPINTHLTA+EAAYIVDNS A+AIVGSAALR+TC + EHLPGGLP Sbjct 61 HAVMWAARRSGLYYVPINTHLTAAEAAYIVDNSSARAIVGSAALRDTCARIGEHLPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 DLL++A G L GW YPECVA +PDTPI+DE EGDLLQYSSGTTGRPKGIKRELPHV P Sbjct 121 DLLLMADGDLDGWEHYPECVAGEPDTPIDDELEGDLLQYSSGTTGRPKGIKRELPHVHPA 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 APGMM AL+ FWM +S+YLSPAP+YHTAPSVW+MSA A G+TTVVMEKFDAEG LDAI Sbjct 181 EAPGMMSALVGFWMTPESIYLSPAPLYHTAPSVWSMSAQAGGITTVVMEKFDAEGCLDAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 QR+RVTH QFVPAMF RMLKLPEAVR+S+D+SSL+RV+HAAAPCPV+IK+QMI WWGPII Sbjct 241 QRHRVTHGQFVPAMFTRMLKLPEAVRHSHDLSSLQRVMHAAAPCPVEIKKQMIDWWGPII 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEA GSTLI+AE+WL HPGSVGKP+ +HI+ +G+ELPP Q GEIYF GGY Sbjct 301 DEYYASSEAIGSTLISAEEWLAHPGSVGKPMACEIHILDENGNELPPGQAGEIYFSGGYS 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLND AKTAASR+KHGWVTVGDVGY+D++GYL+LT RRHHMIISGGVNIYPQEAENLL Sbjct 361 FEYLNDEAKTAASRDKHGWVTVGDVGYVDEEGYLYLTDRRHHMIISGGVNIYPQEAENLL 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 V HPKVLDAAVFGVPDDEMGQRVMAAVQTVD DA D+F ELL+WLRDRL+H+KCPR+I Sbjct 421 VTHPKVLDAAVFGVPDDEMGQRVMAAVQTVDPGDATDEFGAELLSWLRDRLAHYKCPRAI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYSV 537 AFE QLPRTDTGKL+K+GL+EKYSV Sbjct 481 AFEEQLPRTDTGKLFKNGLIEKYSV 505 >gi|118469180|ref|YP_884672.1| long-chain-fatty-acid--CoA ligase [Mycobacterium smegmatis str. MC2 155] gi|118170467|gb|ABK71363.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155] Length=504 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/504 (77%), Positives = 435/504 (87%), Gaps = 0/504 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR ++GA+KPA+ILYPSGTV++FDELEARANRLAH FR GL+E DVVAILMENN H+ Sbjct 1 MQIREHVGANKPAIILYPSGTVVTFDELEARANRLAHHFRNQGLQEGDVVAILMENNSHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 H VMWAARRSGLYYVPI+THLTA+EAAYIVDNSGAKAIVGSA +R+ GL + LP GLP Sbjct 61 HTVMWAARRSGLYYVPISTHLTAAEAAYIVDNSGAKAIVGSAKMRDVLAGLGDELPNGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 D L++A G L GW+ YPE VAD PDTPI+DE +GDLLQYSSGTTGRPKGIKRELPHV P Sbjct 121 DTLLIADGDLDGWLRYPEAVADLPDTPIDDELDGDLLQYSSGTTGRPKGIKRELPHVHPS 180 Query 213 AAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAI 272 PGMM AL+ FWM DSVYLSPAP+YHTAPSVW+M AAG TTVVMEKFDAEG L+AI Sbjct 181 ENPGMMAALISFWMTPDSVYLSPAPLYHTAPSVWSMQVQAAGHTTVVMEKFDAEGCLEAI 240 Query 273 QRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPII 332 Q++RVTH QFVPAMF RMLKLPE+VRNSYD+SSL+RV+HAAAPCPV IK+QMI WWGPI+ Sbjct 241 QKHRVTHGQFVPAMFTRMLKLPESVRNSYDVSSLKRVMHAAAPCPVDIKKQMIDWWGPIV 300 Query 333 DEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP 392 DEYYASSEA G+TLITAE+WL HPGSVGKP+ G VH++ DG+ELPP Q GEI+FEGG Sbjct 301 DEYYASSEAIGATLITAEEWLKHPGSVGKPLTGIVHVLDEDGNELPPGQAGEIFFEGGQD 360 Query 393 FEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 FEYLND KTA+SR+ GW TVGD+GYLD++GYL+LT RRHHMIISGGVNIYPQEAEN+L Sbjct 361 FEYLNDAEKTASSRDARGWKTVGDIGYLDEEGYLYLTDRRHHMIISGGVNIYPQEAENML 420 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 V HPKV+DAAVFGVPDDEMGQ V VQTVD ADA +F ELLAWLRDRL+H+KCPRSI Sbjct 421 VTHPKVMDAAVFGVPDDEMGQSVKGVVQTVDPADATPEFGEELLAWLRDRLAHYKCPRSI 480 Query 513 AFEPQLPRTDTGKLYKSGLVEKYS 536 +FE QLPRTDTGKLYK L+ KYS Sbjct 481 SFELQLPRTDTGKLYKQELIAKYS 504 >gi|126432779|ref|YP_001068470.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. JLS] gi|126232579|gb|ABN95979.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS] Length=506 Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/506 (77%), Positives = 435/506 (86%), Gaps = 2/506 (0%) Query 33 MQIRPYIGA--DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNE 90 MQIR A DKPA+I+YPSGTV++F ELEARANRLAH FR AGL E D VAILMENNE Sbjct 1 MQIRDTAVATPDKPAIIMYPSGTVVTFGELEARANRLAHLFRDAGLVEGDAVAILMENNE 60 Query 91 HVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGG 150 H+HAVMWAARRSGLYYVPINTHLTA+E AYIVDNSGAKAIVGS L +T GL LP G Sbjct 61 HIHAVMWAARRSGLYYVPINTHLTAAEVAYIVDNSGAKAIVGSGKLADTLAGLEAELPRG 120 Query 151 LPDLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVS 210 LP + ++AG L GW +YP+CVAD+PDTPI DE EGDLLQYSSGTTGRPKGIKRELPHV Sbjct 121 LPPVRLIAGAQLDGWQSYPDCVADKPDTPIADEIEGDLLQYSSGTTGRPKGIKRELPHVP 180 Query 211 PDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALD 270 P +PGMM AL+ FWM D+VYLSPAP+YHTAPSVW+M A G+TTVVMEKFDAEGALD Sbjct 181 PSESPGMMAALVSFWMHPDAVYLSPAPLYHTAPSVWSMQTQAGGITTVVMEKFDAEGALD 240 Query 271 AIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGP 330 AI +Y+VTH QFVP MF RMLKLPE VR SYD+SSL RV+HAAAPCPV+IK+QMI WWGP Sbjct 241 AIAKYKVTHGQFVPVMFTRMLKLPEDVRKSYDVSSLERVMHAAAPCPVEIKKQMIDWWGP 300 Query 331 IIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGG 390 I+DEYYASSEA GSTLITAE+WLTHPGSVG+P+ G +HIVG DG+ELPP Q GEIYFEGG Sbjct 301 IVDEYYASSEAHGSTLITAEEWLTHPGSVGRPLTGVLHIVGEDGNELPPGQAGEIYFEGG 360 Query 391 YPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAEN 450 Y FEYLNDP KTA+SR+ GW TVGD+GYLD++GYL+LT RRHHMIISGGVNIYPQEAEN Sbjct 361 YDFEYLNDPEKTASSRHPLGWKTVGDIGYLDEEGYLYLTDRRHHMIISGGVNIYPQEAEN 420 Query 451 LLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPR 510 +L+ HPKV+DAAVFGVPDDEMGQ V A VQTVD ADA D FA EL++WLRDRL+H+KCPR Sbjct 421 MLITHPKVMDAAVFGVPDDEMGQSVRAVVQTVDPADATDGFAEELISWLRDRLAHYKCPR 480 Query 511 SIAFEPQLPRTDTGKLYKSGLVEKYS 536 S++FEPQLPRTDTGKLYK L++KYS Sbjct 481 SLSFEPQLPRTDTGKLYKQELIKKYS 506 >gi|120401244|ref|YP_951073.1| long-chain-fatty-acid--CoA ligase [Mycobacterium vanbaalenii PYR-1] gi|119954062|gb|ABM11067.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii PYR-1] Length=516 Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/516 (76%), Positives = 438/516 (85%), Gaps = 12/516 (2%) Query 33 MQIRPYIGA--DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNE 90 MQIR A DKPA+I+YPSGTV++F ELEARANRLAH FR AGL E D VAILMENNE Sbjct 1 MQIRDTAVATPDKPAIIMYPSGTVVTFGELEARANRLAHLFRDAGLVEGDAVAILMENNE 60 Query 91 HVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGG 150 H+HAVMWAARR+GLYYVPI+THLTA+E AYIVDNSGAKAIVGSA L++T GLAE LP G Sbjct 61 HIHAVMWAARRAGLYYVPISTHLTAAEVAYIVDNSGAKAIVGSAKLKDTLAGLAEELPNG 120 Query 151 LPDLLMLAGGG----------LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPK 200 LP L ++AGG L GW YPECVAD+PDTPI DE EGDLLQYSSGTTGRPK Sbjct 121 LPPLRLIAGGAESSATSASSELEGWQRYPECVADKPDTPIADEIEGDLLQYSSGTTGRPK 180 Query 201 GIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVM 260 GIKRELPHV P +PG+M AL+ FWM D+VYLSPAP+YHTAPSVW+M A G+TTVVM Sbjct 181 GIKRELPHVPPSESPGLMAALVSFWMHPDAVYLSPAPLYHTAPSVWSMQTQAGGITTVVM 240 Query 261 EKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQI 320 EKFDAEGALDAI +++VTH QFVP MF RMLKLPEAVR SYD+SSL RV+HAAAPCPV I Sbjct 241 EKFDAEGALDAIAKHKVTHGQFVPVMFTRMLKLPEAVRKSYDVSSLERVMHAAAPCPVDI 300 Query 321 KEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPN 380 K+QMI WWGPI+DEYYASSEA GSTLI+AEDWLTHPGSVGKP+ G VHIVG DG ELPP Sbjct 301 KKQMIDWWGPIVDEYYASSEAHGSTLISAEDWLTHPGSVGKPLTGVVHIVGEDGEELPPG 360 Query 381 QPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGG 440 Q GEIYFEGGY FEYLNDP KTA+SR+ GW TVGD+GYLDD+GYL+LT RRHHMIISGG Sbjct 361 QAGEIYFEGGYDFEYLNDPDKTASSRHPQGWKTVGDIGYLDDEGYLYLTDRRHHMIISGG 420 Query 441 VNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLR 500 VNIYPQEAENLLV HPKV+DAAVFG+PD+EMGQ V A VQTVD ADA ++FA EL++WLR Sbjct 421 VNIYPQEAENLLVTHPKVMDAAVFGIPDEEMGQSVKAVVQTVDPADATEEFAAELISWLR 480 Query 501 DRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYS 536 DRL+H+KCPRS++FE QLPRTDTGKLYK LV+K+S Sbjct 481 DRLAHYKCPRSLSFEAQLPRTDTGKLYKQELVKKHS 516 >gi|108797157|ref|YP_637354.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MCS] gi|119866242|ref|YP_936194.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. KMS] gi|108767576|gb|ABG06298.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS] gi|119692331|gb|ABL89404.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS] Length=506 Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/506 (77%), Positives = 434/506 (86%), Gaps = 2/506 (0%) Query 33 MQIRPYIGA--DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNE 90 MQIR A DKPA+I+YPSGTV++F ELEARANRLAH FR AGL E D VAILMENNE Sbjct 1 MQIRDTAVATPDKPAIIMYPSGTVVTFGELEARANRLAHLFRDAGLVEGDAVAILMENNE 60 Query 91 HVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGG 150 H+HAVMWAARRSGLYYVPINTHLTA+E AYIVDNSGAKAIVGS L +T GL LP G Sbjct 61 HIHAVMWAARRSGLYYVPINTHLTAAEVAYIVDNSGAKAIVGSGKLADTLAGLEAELPHG 120 Query 151 LPDLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVS 210 LP + ++AG L GW +YP+CVAD+PDTPI DE EGDLLQYSSGTT RPKGIKRELPHV Sbjct 121 LPPVRLIAGAQLDGWQSYPDCVADKPDTPIADEIEGDLLQYSSGTTVRPKGIKRELPHVP 180 Query 211 PDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALD 270 P +PGMM AL+ FWM D+VYLSPAP+YHTAPSVW+M A G+TTVVMEKFDAEGALD Sbjct 181 PSESPGMMAALVSFWMHPDAVYLSPAPLYHTAPSVWSMQTQAGGITTVVMEKFDAEGALD 240 Query 271 AIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGP 330 AI +Y+VTH QFVP MF RMLKLPE VR SYD+SSL RV+HAAAPCPV+IK+QMI WWGP Sbjct 241 AIAKYKVTHGQFVPVMFTRMLKLPEDVRKSYDVSSLERVMHAAAPCPVEIKKQMIDWWGP 300 Query 331 IIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGG 390 I+DEYYASSEA GSTLITAE+WLTHPGSVG+P+ G +HIVG DG+ELPP Q GEIYFEGG Sbjct 301 IVDEYYASSEAHGSTLITAEEWLTHPGSVGRPLTGVLHIVGEDGNELPPGQAGEIYFEGG 360 Query 391 YPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAEN 450 Y FEYLNDP KTA+SR+ GW TVGD+GYLD++GYL+LT RRHHMIISGGVNIYPQEAEN Sbjct 361 YDFEYLNDPEKTASSRHPLGWKTVGDIGYLDEEGYLYLTDRRHHMIISGGVNIYPQEAEN 420 Query 451 LLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPR 510 +L+ HPKV+DAAVFGVPDDEMGQ V A VQTVD ADA D FA EL++WLRDRL+H+KCPR Sbjct 421 MLITHPKVMDAAVFGVPDDEMGQSVRAVVQTVDPADATDAFAEELISWLRDRLAHYKCPR 480 Query 511 SIAFEPQLPRTDTGKLYKSGLVEKYS 536 S++FEPQLPRTDTGKLYK L++KYS Sbjct 481 SLSFEPQLPRTDTGKLYKQELIKKYS 506 >gi|333988818|ref|YP_004521432.1| fatty-acid-CoA ligase [Mycobacterium sp. JDM601] gi|333484786|gb|AEF34178.1| fatty-acid-CoA ligase FadD4 [Mycobacterium sp. JDM601] Length=509 Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/508 (78%), Positives = 441/508 (87%), Gaps = 4/508 (0%) Query 33 MQIRPYI----GADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMEN 88 MQIR + GADKPA+IL+PSGTVI+FD+LEARANRLAH+FR+AGL E D VAILMEN Sbjct 1 MQIREHTSGHGGADKPAIILHPSGTVITFDDLEARANRLAHFFRRAGLAEGDTVAILMEN 60 Query 89 NEHVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLP 148 NEH+HAVMWAARRSGLYYVPINTHLTA+EAAYI+DNS AKA++GSAALR C LA HLP Sbjct 61 NEHIHAVMWAARRSGLYYVPINTHLTAAEAAYIIDNSSAKAVIGSAALRTICENLAAHLP 120 Query 149 GGLPDLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPH 208 GGLP LL++A L GW YPECVADQPDTPI+DE EGDLLQYSSGTTGRPKGIKR LPH Sbjct 121 GGLPSLLLIADDDLEGWQRYPECVADQPDTPIDDEIEGDLLQYSSGTTGRPKGIKRALPH 180 Query 209 VSPDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGA 268 + P APG+M L+ WM DSVYLSPAP+YHTAPSVW+M+A AAG+TTVV+EKFD EG Sbjct 181 LPPAEAPGLMTMLVAVWMSPDSVYLSPAPLYHTAPSVWSMTAQAAGITTVVLEKFDPEGC 240 Query 269 LDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWW 328 L+AIQRY VTHAQFVPA F R+LKLP+A+RNSYD+SSL+RV+HAAAPCPV+IK+QMI WW Sbjct 241 LEAIQRYGVTHAQFVPAHFARLLKLPDAIRNSYDVSSLQRVMHAAAPCPVEIKKQMIDWW 300 Query 329 GPIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFE 388 GPI+DEYYASSEA GSTLI AEDWL HPGSVGKP+ G VHI+ DG+ELP + GEIYFE Sbjct 301 GPIVDEYYASSEAHGSTLIAAEDWLLHPGSVGKPMLGAVHILDEDGNELPAGEAGEIYFE 360 Query 389 GGYPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEA 448 GG FEYLNDP KTA SR+ GWVTVGDVGYLD++GYL+LT RRHHMIISGGVNIYPQEA Sbjct 361 GGNAFEYLNDPDKTAKSRHPRGWVTVGDVGYLDEEGYLYLTDRRHHMIISGGVNIYPQEA 420 Query 449 ENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKC 508 ENLL+ HPKV+DAAVFG+PDDEMGQRV AAVQTVD ADA D FA ELL WLR+RL+H+KC Sbjct 421 ENLLITHPKVMDAAVFGIPDDEMGQRVKAAVQTVDPADATDAFAEELLVWLRERLAHYKC 480 Query 509 PRSIAFEPQLPRTDTGKLYKSGLVEKYS 536 PRSI+FE QLPRTDTGKLYK+ LV KYS Sbjct 481 PRSISFESQLPRTDTGKLYKNELVAKYS 508 >gi|145221053|ref|YP_001131731.1| long-chain-fatty-acid--CoA ligase [Mycobacterium gilvum PYR-GCK] gi|315441975|ref|YP_004074854.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium sp. Spyr1] gi|145213539|gb|ABP42943.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK] gi|315260278|gb|ADT97019.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium sp. Spyr1] Length=516 Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/516 (74%), Positives = 431/516 (84%), Gaps = 12/516 (2%) Query 33 MQIRPYIGA--DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNE 90 MQIR A DKPAVI+YP+GTV++F ELEARANRLAH FR AGL E D VA+LMENNE Sbjct 1 MQIRDTAVATPDKPAVIMYPAGTVVTFGELEARANRLAHLFRDAGLVEGDAVALLMENNE 60 Query 91 HVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGG 150 H HAVMWAARR+GLYYVPINTHLTA+E AYIVDNSGAKAIVGSA L +T GL LP G Sbjct 61 HFHAVMWAARRAGLYYVPINTHLTAAEVAYIVDNSGAKAIVGSAKLADTLAGLEAELPNG 120 Query 151 LPDLLMLAG----------GGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPK 200 LP LL++AG G + GW YPECVAD+ +TPI DE +GDLLQYSSGTTGRPK Sbjct 121 LPQLLLVAGAELSATSASGGDVDGWQRYPECVADKLETPIADEIDGDLLQYSSGTTGRPK 180 Query 201 GIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVM 260 GIKRELPH+ P PGMM L++FWM D+VYLSPAP+YHTAPSVW+M A G+TTVVM Sbjct 181 GIKRELPHLPPAEVPGMMAMLVEFWMHPDAVYLSPAPLYHTAPSVWSMQVQAGGITTVVM 240 Query 261 EKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQI 320 EKFDAEGALDAIQ+Y+VTH QFVP MF RMLKLPE VR SYD+SSL+RV+HAAAPCPV+I Sbjct 241 EKFDAEGALDAIQKYKVTHGQFVPVMFARMLKLPEDVRKSYDVSSLQRVMHAAAPCPVEI 300 Query 321 KEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPN 380 K+QMI WWGPI+DEYYASSEA GSTLITA+ WL PGSVGKP+ G VHIVG DG+ELP Sbjct 301 KKQMIDWWGPIVDEYYASSEAHGSTLITADQWLERPGSVGKPLTGVVHIVGEDGNELPAG 360 Query 381 QPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGG 440 Q GEIYFEGGY FEYLNDP KTA+SR+ GW TVGD+GY+D++G+LFLT RRHHMIISGG Sbjct 361 QAGEIYFEGGYDFEYLNDPDKTASSRHPQGWKTVGDIGYVDEEGFLFLTDRRHHMIISGG 420 Query 441 VNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLR 500 VNIYPQEAENLLV HPKV+DAAVFG+PD+EMGQRV A VQ VD ADA ++FA EL+ WLR Sbjct 421 VNIYPQEAENLLVTHPKVMDAAVFGIPDEEMGQRVKAVVQLVDQADATEEFADELIGWLR 480 Query 501 DRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYS 536 DRL+H+KCPRS++FE QLPRTDTGKLYK L++KYS Sbjct 481 DRLAHYKCPRSLSFEEQLPRTDTGKLYKQELIKKYS 516 >gi|254819953|ref|ZP_05224954.1| acyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950] Length=508 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/505 (73%), Positives = 418/505 (83%), Gaps = 1/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 M+IR +I + KPA++L +GTVI F ELE RANRLAH++ AGLRE D VA L+ENNEHV Sbjct 1 MEIRDHISSGKPALVLARTGTVIDFAELEKRANRLAHFWYAAGLREGDTVAALLENNEHV 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYY INTHLTA+EAAYIVDNS AKA++GS A R+ C GLAEH PGGLP Sbjct 61 HAVMWAARRSGLYYALINTHLTAAEAAYIVDNSSAKALIGSRATRDICEGLAEHSPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 +LL++A L GW YPECVADQP+TPI DE EGDLLQYSSGTTGRPKGI+RELPH+ P Sbjct 121 ELLLIADDDLDGWYRYPECVADQPETPIPDESEGDLLQYSSGTTGRPKGIRRELPHLPPS 180 Query 213 AAPG-MMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDA 271 AP +MP + + ++SVYLSPAP+YHTAPS W+M + G TTVVMEKFD E AL+ Sbjct 181 EAPSILMPLMNAVGITSESVYLSPAPLYHTAPSFWSMVVQSLGGTTVVMEKFDPEHALEC 240 Query 272 IQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPI 331 IQRY +TH QFVPAMFVRMLKLPEAVR SYD+SSL+RV+HAAAPCPV IK+QMI WWGPI Sbjct 241 IQRYGITHGQFVPAMFVRMLKLPEAVRISYDVSSLQRVVHAAAPCPVDIKKQMIAWWGPI 300 Query 332 IDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGY 391 IDEYYA+SEA G++ I AEDWLTHPGSVG+P+ G HI+ G ELPP PGEIY+EGG+ Sbjct 301 IDEYYAASEAVGASFIRAEDWLTHPGSVGRPLVGVPHILDESGHELPPGVPGEIYYEGGH 360 Query 392 PFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENL 451 F+YL D AKTAA+ + HGWVTVGD+GYLD DGYL+LT RRHHMIISGGVNIYPQEAE+L Sbjct 361 SFQYLKDDAKTAAAHDAHGWVTVGDIGYLDVDGYLYLTDRRHHMIISGGVNIYPQEAEDL 420 Query 452 LVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRS 511 L+ HPKVLDAAVFG+PDDEMGQ V VQTVD ADAND FA ELL WLR+RL+H+KCPRS Sbjct 421 LITHPKVLDAAVFGIPDDEMGQAVKGVVQTVDPADANDGFAAELLEWLRNRLAHYKCPRS 480 Query 512 IAFEPQLPRTDTGKLYKSGLVEKYS 536 ++FE QLPRTD GKLYK LV KYS Sbjct 481 LSFEAQLPRTDAGKLYKQQLVGKYS 505 >gi|126436733|ref|YP_001072424.1| acyl-CoA synthetase [Mycobacterium sp. JLS] gi|126236533|gb|ABN99933.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS] Length=517 Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/514 (73%), Positives = 424/514 (83%), Gaps = 1/514 (0%) Query 25 RAATYPRRMQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAI 84 R Y RMQIR +I + +PAV+LYPSG VI F ELEARANRLAH FR+AGLRE D VA Sbjct 3 RGRKYGERMQIREHIDSGQPAVVLYPSGNVIDFGELEARANRLAHLFRRAGLREGDTVAA 62 Query 85 LMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLA 144 ++ENNEHVH VMWAARRSGLYY INTHLTA EAAYIVDNSGAKA++GS+A R+ C GLA Sbjct 63 ILENNEHVHVVMWAARRSGLYYALINTHLTAPEAAYIVDNSGAKAVIGSSATRKVCEGLA 122 Query 145 EHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKR 204 EHLPGGLPDLL+LA + GW YPECVAD P TPI DE EGDLLQYSSGTTGRPKGI+R Sbjct 123 EHLPGGLPDLLLLADDDVEGWQRYPECVADLPSTPIPDESEGDLLQYSSGTTGRPKGIRR 182 Query 205 ELPHVSPDAAPG-MMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKF 263 ELPH++P AP +MP + + ++SVYLSPAP+YHTAPS W+M + G TTVVMEKF Sbjct 183 ELPHLAPVDAPSILMPLMNAVGITSESVYLSPAPLYHTAPSFWSMVVQSMGGTTVVMEKF 242 Query 264 DAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQ 323 D E AL+ I+RY VTH QFVPAMFVRMLKLPEAVR SYD+SSLRRV+HAAAPCPV+IK + Sbjct 243 DPERALECIERYGVTHGQFVPAMFVRMLKLPEAVRKSYDLSSLRRVVHAAAPCPVEIKRR 302 Query 324 MIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPG 383 MI WWGPIIDEYYASSEA G++ I AE+WL HPGSVG+P+ G HI+ +G+ELP + G Sbjct 303 MIDWWGPIIDEYYASSEAVGASFIRAEEWLDHPGSVGRPLVGVPHILDENGAELPAGEIG 362 Query 384 EIYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNI 443 EIY+EGG+ FEYL D AKT ASR+ HGWVTVGDVGYLD+ GYLFLT RRHHMIISGGVNI Sbjct 363 EIYYEGGHSFEYLKDDAKTRASRDAHGWVTVGDVGYLDEGGYLFLTDRRHHMIISGGVNI 422 Query 444 YPQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRL 503 YPQEAE+LLV HPKV+DAAVFGVPDDEMGQ V VQTVD ADA ++F ELL WLRDRL Sbjct 423 YPQEAEDLLVTHPKVMDAAVFGVPDDEMGQSVKGVVQTVDPADATEEFGHELLKWLRDRL 482 Query 504 SHFKCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV 537 +H+KCPRS++FE QLPR+DTGKLYK LV +YS Sbjct 483 AHYKCPRSLSFEAQLPRSDTGKLYKQALVSRYST 516 >gi|118467099|ref|YP_881739.1| acyl-CoA synthetase [Mycobacterium avium 104] gi|118168386|gb|ABK69283.1| acyl-CoA synthase [Mycobacterium avium 104] Length=508 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/505 (72%), Positives = 417/505 (83%), Gaps = 1/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 M+IR +I + KPA++L +GTVI F ELE RANRLAH++ AGLRE D VA L+ENNEHV Sbjct 1 MEIRDHISSGKPALVLARTGTVIDFAELEKRANRLAHFWYAAGLREGDTVAALLENNEHV 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARRSGLYY INTHLTA+EAAYIVDNS AKA++GS A R+ C GLAEH PGGLP Sbjct 61 HAVMWAARRSGLYYTLINTHLTAAEAAYIVDNSSAKALIGSRATRDVCEGLAEHSPGGLP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 +LL++A L GW YPECVADQP+TPI DE EGDLLQYSSGTTGRPKGI+RELPH+ P Sbjct 121 ELLLIADDDLDGWYRYPECVADQPETPIPDESEGDLLQYSSGTTGRPKGIRRELPHLPPS 180 Query 213 AAPG-MMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDA 271 AP +MP + + ++SVYLSPAP+YHTAPS W+M + G TTVVMEKFD E AL+ Sbjct 181 EAPNILMPLMNAVGITSESVYLSPAPLYHTAPSFWSMVVQSLGGTTVVMEKFDPEHALEC 240 Query 272 IQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPI 331 IQRY +TH QFVPAMFVRML+LPEAVR SYD+SSL+RV+HAAAPCPV IK+QMI WWGPI Sbjct 241 IQRYGITHGQFVPAMFVRMLRLPEAVRMSYDVSSLQRVVHAAAPCPVDIKKQMIAWWGPI 300 Query 332 IDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGY 391 IDEYYA+SEA G++ I AEDWL HPGSVG+P+ G HI+ G ELPP PGEIY+EGG+ Sbjct 301 IDEYYAASEAVGASFIRAEDWLIHPGSVGRPLVGVPHILDESGHELPPGVPGEIYYEGGH 360 Query 392 PFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENL 451 F+YL D AKTAA+ + HGWVTVGD+GYLD DGYL+LT RRHHMIISGGVNIYPQEAE+L Sbjct 361 SFQYLKDDAKTAAAHDAHGWVTVGDIGYLDVDGYLYLTDRRHHMIISGGVNIYPQEAEDL 420 Query 452 LVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRS 511 L+ HPKVLDAAVFG+PDDEMGQ V VQTVD ADAND FA ELL WLR+RL+H+KCPRS Sbjct 421 LITHPKVLDAAVFGIPDDEMGQAVKGVVQTVDPADANDGFAAELLEWLRNRLAHYKCPRS 480 Query 512 IAFEPQLPRTDTGKLYKSGLVEKYS 536 ++FE QLPRTD GKLYK LV KYS Sbjct 481 LSFEAQLPRTDAGKLYKQELVGKYS 505 >gi|333992425|ref|YP_004525039.1| fatty-acid-CoA ligase [Mycobacterium sp. JDM601] gi|333488392|gb|AEF37784.1| fatty-acid-CoA ligase FadD4 [Mycobacterium sp. JDM601] Length=511 Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/505 (71%), Positives = 411/505 (82%), Gaps = 1/505 (0%) Query 33 MQIRPYIGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHV 92 MQIR Y + KPA++LYPSG +SF ELEARANRLAH FR AGLRE DV+AI+M NNEH+ Sbjct 1 MQIRQYTDSQKPALVLYPSGATVSFAELEARANRLAHHFRLAGLREGDVIAIVMNNNEHI 60 Query 93 HAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP 152 HAVMWAARR GLYY INTHLTA+EAAYIV NSGA A+VG+ A + C GL E L +P Sbjct 61 HAVMWAARRIGLYYAVINTHLTAAEAAYIVSNSGAAAVVGARATADLCRGLDEQLGSRMP 120 Query 153 DLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD 212 L M+A + GW YPECVAD P+ P+ DEREGDLLQYSSGTTGRPKGI R+L ++P Sbjct 121 TLRMIADAEIQGWQRYPECVADHPELPVPDEREGDLLQYSSGTTGRPKGIVRQLSGLTPA 180 Query 213 AAPGMMPALLD-FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDA 271 AP ++ + D +D DSVYL+PAP+YHTAP+ W+MSA A G TTV++E FDA GAL A Sbjct 181 DAPMLLTPMFDRLGIDRDSVYLNPAPVYHTAPAYWSMSAQAVGATTVLLEMFDARGALAA 240 Query 272 IQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPI 331 I++YRVTH QFVPAMFVRMLKL E VR+SYD+SSLRRV+HAAAPCPV IK+QMI WWGPI Sbjct 241 IEQYRVTHGQFVPAMFVRMLKLHERVRSSYDLSSLRRVVHAAAPCPVGIKQQMIDWWGPI 300 Query 332 IDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGY 391 +DE+YASSE +GST ITAE+WL PGSVG+P+ G HIVG DG EL P + GEIYF GG Sbjct 301 LDEFYASSEGAGSTYITAEEWLARPGSVGRPLVGVAHIVGDDGRELRPGEAGEIYFSGGM 360 Query 392 PFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENL 451 F YLND AKTAASRN+ GW TVGD+GYLD++GYLFLT RRHHMIISGGVNIYPQEAEN+ Sbjct 361 SFSYLNDEAKTAASRNRDGWATVGDMGYLDEEGYLFLTDRRHHMIISGGVNIYPQEAENM 420 Query 452 LVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRS 511 L+ HPKVLDAAVFG+PD EMGQ V AAVQTVD ADA + A EL+AWLRDRL+H+KCPRS Sbjct 421 LITHPKVLDAAVFGIPDAEMGQSVQAAVQTVDPADATAEVAAELIAWLRDRLAHYKCPRS 480 Query 512 IAFEPQLPRTDTGKLYKSGLVEKYS 536 +AFE QLPR+DTGKLYK L+EKYS Sbjct 481 LAFEAQLPRSDTGKLYKRELIEKYS 505 >gi|254822206|ref|ZP_05227207.1| acyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950] Length=496 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/482 (65%), Positives = 371/482 (77%), Gaps = 0/482 (0%) Query 55 ISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLT 114 ++F ELEA ANRLAH+ R++G+ D VA+LMENNEH+HA MWAA+RSGLYY +NTHL+ Sbjct 1 MTFAELEASANRLAHFLRRSGMVAGDTVAVLMENNEHIHAAMWAAKRSGLYYTLLNTHLS 60 Query 115 ASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVAD 174 SE AYIV +SGAKA++ S ALR+ C L E LP GLP + ++A L GW YPECVA Sbjct 61 PSEIAYIVADSGAKALISSRALRDVCRQLPEELPSGLPPVALIADDDLPGWRRYPECVAT 120 Query 175 QPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLS 234 +P TPI DE +G LLQYS+G+TGRPKGI+R L + P + SVYLS Sbjct 121 EPSTPIADECDGQLLQYSAGSTGRPKGIRRPLNPGGAGLSNLSTPVFGALGVTDQSVYLS 180 Query 235 PAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLP 294 PAP YHTAP++WTM+A AAG TT++MEKFDAE ALD IQR VTHAQFVP MFVRML++P Sbjct 181 PAPTYHTAPAMWTMAAQAAGATTILMEKFDAEQALDCIQRRGVTHAQFVPTMFVRMLRMP 240 Query 295 EAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLT 354 E R YD+SSLRRV+HAAAPCP IK QMI WWGPI+DEYY SSE +G + I A++WL Sbjct 241 EEARTRYDLSSLRRVVHAAAPCPPAIKRQMIEWWGPIVDEYYGSSEGAGISFIRADEWLA 300 Query 355 HPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDPAKTAASRNKHGWVTV 414 HPGSVG+P+ G HI+ DG+EL P Q GEIY+ GGYPFEYLND AKTAA+R+ GWVTV Sbjct 301 HPGSVGRPMLGTPHILDEDGTELGPGQIGEIYYAGGYPFEYLNDQAKTAAARSPEGWVTV 360 Query 415 GDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVLDAAVFGVPDDEMGQR 474 GDVGYLDDDGYL+LT RR+HMIISGGVNIYPQE+ENLLV+HP V+DAAVFGVPD MGQ Sbjct 361 GDVGYLDDDGYLYLTDRRNHMIISGGVNIYPQESENLLVSHPLVVDAAVFGVPDPVMGQS 420 Query 475 VMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLPRTDTGKLYKSGLVEK 534 V A VQ D A A D A EL+ WLR+R++H+KCPRS+ FE QLPRTD GKLYK L+ K Sbjct 421 VTAVVQLADPALACDGLADELIGWLRNRMAHYKCPRSLYFEAQLPRTDAGKLYKRKLIGK 480 Query 535 YS 536 Y+ Sbjct 481 YA 482 >gi|289568117|ref|ZP_06448344.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis T17] gi|289541870|gb|EFD45519.1| fatty-acid-CoA ligase fadD4 [Mycobacterium tuberculosis T17] Length=294 Score = 590 bits (1522), Expect = 2e-166, Method: Compositional matrix adjust. Identities = 287/288 (99%), Positives = 288/288 (100%), Gaps = 0/288 (0%) Query 1 LPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 +PRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL Sbjct 1 MPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIGADKPAVILYPSGTVISFDEL 60 Query 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY Sbjct 61 EARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAY 120 Query 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI Sbjct 121 IVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLVGWMTYPECVADQPDTPI 180 Query 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH Sbjct 181 EDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYH 240 Query 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFV 288 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFV Sbjct 241 TAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQFVPAMFV 288 >gi|296269878|ref|YP_003652510.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM 43833] gi|296092665|gb|ADG88617.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM 43833] Length=512 Score = 521 bits (1342), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 261/498 (53%), Positives = 340/498 (69%), Gaps = 7/498 (1%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DKPAVI+ SG VI+F EL +NRLAH FR AGLR D +A ++EN+ + WAA R Sbjct 12 DKPAVIMAESGQVITFRELNEESNRLAHLFRAAGLRPGDNIAFMLENHPQFLTIAWAAHR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 SGLYY IN+ L E AYIV+N A+ + SA L E + E PG +L ++ G Sbjct 72 SGLYYTAINSKLKTDELAYIVNNCNARVFISSARLAEVAASITEATPGV--ELRLMLDGT 129 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPAL 221 G+ ++ E +A P TPIEDE +G + YSSGTTGRPKG+K EL +P PG + L Sbjct 130 APGFTSFEEAIARHPVTPIEDECQGADMLYSSGTTGRPKGVKPELTK-APLEEPGPLMKL 188 Query 222 LDFWMD--ADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 + F A+SVYLSPAP+YH AP + M+ G T VVME+FD E AL I++YRVTH Sbjct 189 IGFLFQPTAESVYLSPAPLYHAAPLRYCMTFHRFGATVVVMERFDPEQALALIEKYRVTH 248 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q+VP MF++MLKLP VR YD+SS + +HAAAPCPV++KE+M+ WWGPI+ EYYA + Sbjct 249 SQWVPTMFIKMLKLPAEVRERYDLSSHKYAVHAAAPCPVEVKERMMEWWGPILHEYYAGT 308 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDP 399 E +G ++WL+H G+VG+P+ G VHI+ DG+ELPP Q G IYF G F Y +DP Sbjct 309 EGNGFVYAGPQEWLSHKGTVGRPLLGVVHILDEDGNELPPRQTGTIYFSDGPQFVYHDDP 368 Query 400 AKTAASRNK--HGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPK 457 KT A+++ GW T+GD+GY+D++GYL+LT RR +MIISGGVNIYPQEAEN+L HPK Sbjct 369 EKTRAAQDPKGRGWTTLGDIGYVDEEGYLYLTDRRAYMIISGGVNIYPQEAENVLALHPK 428 Query 458 VLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQ 517 V D AV GVPD EMG++V A VQ V ADA + EL+ + R RL+H+KCP+S+ F + Sbjct 429 VADVAVIGVPDPEMGEQVKAVVQPVSMADAGPELEAELIEYCRARLAHYKCPKSVDFREE 488 Query 518 LPRTDTGKLYKSGLVEKY 535 LPR TGKLYK L ++Y Sbjct 489 LPRHPTGKLYKRLLRDEY 506 >gi|254514058|ref|ZP_05126119.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3] gi|219676301|gb|EED32666.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3] Length=517 Score = 507 bits (1306), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 258/497 (52%), Positives = 336/497 (68%), Gaps = 8/497 (1%) Query 43 KPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRS 102 KPA+I+ SG ++++ EL+ R+N+ A FR GL + D VA++MEN + W A+R+ Sbjct 14 KPAIIMGDSGAMVTYRELDERSNQAAQLFRSLGLEKGDHVALMMENRREYLEICWGAQRA 73 Query 103 GLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGL 162 GL Y PI++HL A E AYI+ N GAK + S A+ + G L++ GG Sbjct 74 GLIYTPISSHLQAEETAYILTNCGAKLFIASPAVAKVAEGAVASAVSVTHRLMV--GGIR 131 Query 163 VGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDA-APGMMPAL 221 G+ ++ E V QP+TPI+D+ G + YSSGTTG+PKG+ +P S D AP + Sbjct 132 PGFESWEEAVDGQPETPIDDQANGVPMLYSSGTTGQPKGVF--VPPESDDVHAPHFLAGT 189 Query 222 LD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 L F ++VYLSPAP+YH AP + M L G TTVVME FD E AL ++ +R TH Sbjct 190 LGAAFGFSEETVYLSPAPLYHAAPLHYNMLTLYMGGTTVVMEHFDPERALALVEEHRATH 249 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q+VP MFVRMLKLP+ VR YD+SS++ IHAAAPCP++ KE+MI WWGP+I EYYA+S Sbjct 250 SQWVPIMFVRMLKLPQEVREKYDVSSMQFAIHAAAPCPIETKERMIDWWGPVIVEYYAAS 309 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEG-GYPFEYLND 398 EA+G+TLI +E WL+H GSVG+ + G +H+V +G ELPP + G IYF G FEY N+ Sbjct 310 EAAGATLIDSEQWLSHKGSVGRAMLGTLHVVDEEGRELPPGEVGTIYFSGPQATFEYHNE 369 Query 399 PAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKV 458 P KTA S N+ GW T GDVGYLD++GYL+LT R+H MIISGGVNIYPQE ENLL+ H KV Sbjct 370 PEKTAESYNEQGWATTGDVGYLDEEGYLYLTDRKHFMIISGGVNIYPQEVENLLITHDKV 429 Query 459 LDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQL 518 D AVFG+P +E G+ V A +Q + DA D+ A EL+ WLR+RLSH K PRSI F L Sbjct 430 ADVAVFGIPHEEFGEEVKAVIQPQNWVDATDEVAIELMEWLRERLSHIKIPRSIDFNENL 489 Query 519 PRTDTGKLYKSGLVEKY 535 PR D GKLYK LVE+Y Sbjct 490 PRLDNGKLYKRHLVEEY 506 >gi|271964753|ref|YP_003338949.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM 43021] gi|270507928|gb|ACZ86206.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM 43021] Length=511 Score = 503 bits (1296), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 262/503 (53%), Positives = 337/503 (67%), Gaps = 11/503 (2%) Query 39 IGADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWA 98 + DKPAVI+ SG V++F EL+ +NRLAH FR AGLR D +A ++EN+ AV WA Sbjct 9 VSPDKPAVIMADSGQVVTFRELDEESNRLAHLFRAAGLRPGDHIAFMLENHPLFLAVAWA 68 Query 99 ARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP--DLLM 156 A RSGLYY I++ L E AYIVDN A+ V SA L E +A + G P +L + Sbjct 69 AHRSGLYYTAISSRLKTDELAYIVDNCEARVFVSSAKLAE----VATSITGATPKVELRL 124 Query 157 LAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPG 216 + G G+ +Y E VA P TPIEDE +G + YSSGTTGRPKG+K L +P PG Sbjct 125 MLDGVAPGFGSYEEAVASHPATPIEDECQGMDMLYSSGTTGRPKGVKPTLSQ-APLDTPG 183 Query 217 MMPALLDFWM--DADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQR 274 + L+ F ADSVYLSPAP+YH AP + M+ G T VVME+FD E AL I++ Sbjct 184 PLLQLIQFLFAPSADSVYLSPAPLYHAAPLRYCMTFQRLGATLVVMERFDPEQALALIEK 243 Query 275 YRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDE 334 Y VTH+Q+VP MF++MLKLPE VR YD+SSL IHAAAPCPV +KE+MI WWGPI+ E Sbjct 244 YGVTHSQWVPTMFIKMLKLPEPVRVRYDLSSLACAIHAAAPCPVPVKERMIEWWGPIVHE 303 Query 335 YYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFE 394 YYA +E +G + +DWL H G+VG+P+ G VHI DG+ELPP + G +YF G F Sbjct 304 YYAGTEGNGFLYVGPDDWLKHKGTVGRPLLGVVHICDEDGNELPPREHGTVYFSDGPRFV 363 Query 395 YLNDPAKTAASRNK--HGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLL 452 Y D KT +SR+ GW T+GD+GYLD++G+L+LT RR +MIISGGVN+YPQEAEN+L Sbjct 364 YHGDEEKTRSSRDPLGRGWTTLGDIGYLDEEGFLYLTDRRSYMIISGGVNVYPQEAENVL 423 Query 453 VAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSI 512 HPKV D AVFG+PD+EMG++V A VQ + A EL+ + R +L+ +KCPRS+ Sbjct 424 SVHPKVADVAVFGIPDEEMGEQVKAVVQPISMDLAGPGLEAELIDYCRSQLAPYKCPRSV 483 Query 513 AFEPQLPRTDTGKLYKSGLVEKY 535 F +LPR TGKLYK L ++Y Sbjct 484 DFREELPRHPTGKLYKRLLRDEY 506 >gi|88703611|ref|ZP_01101327.1| AMP-binding enzyme [Congregibacter litoralis KT71] gi|88702325|gb|EAQ99428.1| AMP-binding enzyme [Congregibacter litoralis KT71] Length=521 Score = 501 bits (1290), Expect = 1e-139, Method: Compositional matrix adjust. Identities = 258/501 (52%), Positives = 333/501 (67%), Gaps = 12/501 (2%) Query 43 KPAVILYPS----GTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWA 98 KPA+I+ + T++++ EL+ R+N+ A FR GLR D +A++MEN + W Sbjct 14 KPAIIVADALGGGDTMVTYRELDERSNQAAQLFRSLGLRTGDHIALMMENRREYLEICWG 73 Query 99 ARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLA 158 A+R+GL Y I++HL A E AYI+ N A+ + S + E A H G ++ Sbjct 74 AQRAGLIYTAISSHLKAEETAYILTNCEARLFIASPKVAEVAQAAASHATGVTHHFMV-- 131 Query 159 GGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDA-APGM 217 GG + ++ E QPDTPI+D+ G + YSSGTTG+PKG+ +P S D AP Sbjct 132 GGVRENFESWEEATDAQPDTPIDDQANGVPMLYSSGTTGQPKGVF--VPPESNDVHAPHF 189 Query 218 MPALLD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRY 275 + L F ++VYLSPAP+YH AP + M L G TTV+ME+FD E AL I+ + Sbjct 190 LAPTLGAAFGFGEETVYLSPAPLYHAAPLHYNMLTLYMGGTTVIMEQFDPEHALALIEEH 249 Query 276 RVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEY 335 RVTH+Q+VP MFVRMLKLPEA+RN YD+SS++ IHAAAPCP++ KE+MI WWGP+I EY Sbjct 250 RVTHSQWVPIMFVRMLKLPEALRNKYDLSSMQFAIHAAAPCPIETKEKMIDWWGPVIVEY 309 Query 336 YASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGY-PFE 394 YA+SE+ G+TLI + WLTH GSVG+ + G VHIV +G ELPP + G IYF G FE Sbjct 310 YAASESIGATLIDSPQWLTHKGSVGRAMMGEVHIVDEEGHELPPGEIGAIYFSGSQATFE 369 Query 395 YLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVA 454 Y +P KTA S N+ GW GDVGYLD++GYL+LT R+H MIISGGVNIYPQE ENLL+ Sbjct 370 YYKEPEKTAESYNERGWANTGDVGYLDEEGYLYLTDRKHFMIISGGVNIYPQEVENLLIT 429 Query 455 HPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAF 514 H KV D AVFG+P +E G+ V A VQ + DA D+ A EL+ WLRDRLSH K PRSI F Sbjct 430 HDKVADVAVFGIPHEEFGEEVKAVVQPQNWVDATDEVAIELMEWLRDRLSHIKIPRSIDF 489 Query 515 EPQLPRTDTGKLYKSGLVEKY 535 +LPR D GKLYK LVE+Y Sbjct 490 NEKLPRLDNGKLYKRHLVEEY 510 >gi|148554681|ref|YP_001262263.1| long-chain-fatty-acid--CoA ligase [Sphingomonas wittichii RW1] gi|148499871|gb|ABQ68125.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1] Length=512 Score = 501 bits (1290), Expect = 1e-139, Method: Compositional matrix adjust. Identities = 261/496 (53%), Positives = 336/496 (68%), Gaps = 6/496 (1%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DKPA I +G V+++ +L+ R+N+ AH FRQAGL+ D+VA+ + N +WAA+R Sbjct 12 DKPAFITAETGEVVTYRQLDRRSNQGAHLFRQAGLQTGDMVALFLTNGPRFLETVWAAQR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 SGLYYV + LTASE Y+++++GAKA+V SA L +T + GL DL + A G Sbjct 72 SGLYYVCMPVRLTASELRYMIEDAGAKALVFSAGLADTVREAVD----GLGDLALFATDG 127 Query 162 LVGWMTYPECVAD-QPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDA-APGMMP 219 G+ E + D PDTPI DE G + YSSGTTG PKGIKR P D P Sbjct 128 EAGFARSFERLRDAMPDTPIADEAPGQDMLYSSGTTGHPKGIKRPRPAGGIDEPTPVTNL 187 Query 220 ALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 A + MDADS+YL PAP+YH+AP ++MS G T +VM KFD E AL I+R+RVTH Sbjct 188 ARTLYGMDADSIYLCPAPLYHSAPLRYSMSVNQLGGTVIVMTKFDPEEALRLIERHRVTH 247 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 AQ+VP FVRMLKLPEAVR YD SSLR HAAAPCPV+IK+ MI WWGPI+ EYY+S+ Sbjct 248 AQWVPTHFVRMLKLPEAVRERYDHSSLRSTFHAAAPCPVEIKQAMIDWWGPIVHEYYSST 307 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDP 399 E +G T TAE+WL H G+VG+ I G + I + LPP + G +YFE G P EY NDP Sbjct 308 ELNGFTAATAEEWLAHKGTVGRAIIGEIRICDENDDPLPPRREGMVYFEKGNPIEYHNDP 367 Query 400 AKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVL 459 KTAA+ N+HGW +VGD+G++D++GYL+LT R+ MIISGGVNIYPQE ENLLV HP+V Sbjct 368 EKTAAAYNRHGWTSVGDIGWVDEEGYLYLTDRQSFMIISGGVNIYPQEIENLLVTHPRVA 427 Query 460 DAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLP 519 DAAV G PD ++G+RV+A VQ +D +DA D A EL +LR LS K P+ I F +LP Sbjct 428 DAAVIGAPDPDLGERVVAVVQPLDWSDAGDALAAELDTFLRKGLSPVKMPKRIEFMRELP 487 Query 520 RTDTGKLYKSGLVEKY 535 R TGKL+K + +++ Sbjct 488 RQPTGKLFKRLIRDRF 503 >gi|103485717|ref|YP_615278.1| AMP-dependent synthetase and ligase [Sphingopyxis alaskensis RB2256] gi|98975794|gb|ABF51945.1| AMP-dependent synthetase and ligase [Sphingopyxis alaskensis RB2256] Length=510 Score = 496 bits (1277), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 259/497 (53%), Positives = 338/497 (69%), Gaps = 9/497 (1%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 +K A+I+ +G IS+ +L+A +NR A FR GL +DVVA +++N H + + W A+R Sbjct 12 EKAAIIVAETGEEISYGDLDAASNRAAQLFRANGLGHEDVVAFMLDNTPHYYGLTWGAQR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 +GL YV I++ LT E YI+DNSGA+ +V SA+L + A+ L G+ +M GG Sbjct 72 AGLRYVCISSRLTQDETDYILDNSGAQILVVSASLADA----AQRLTTGIKRFVM--GGA 125 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHV-SPDAAPGM-MP 219 + G+ ++ + VA P TP+ DER G + YSSGTTGRPKG++ LP + DA + M Sbjct 126 IAGYESWEDAVAAMPATPVADERAGVDMLYSSGTTGRPKGVRVPLPEDPAIDATNSLVML 185 Query 220 ALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 A F ++ADS+YLSPAP+YH AP W+M+ G T V+M+KFD E AL I+RYRV Sbjct 186 ASAVFQINADSIYLSPAPLYHAAPLRWSMTIHRLGGTVVLMKKFDPEAALAHIERYRVNS 245 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q+VP FVRMLKLPE VRN YD+SSL+ IHAAAPCPV +K+ MI WWGP++ EYYA S Sbjct 246 SQWVPTHFVRMLKLPEEVRNRYDLSSLKVAIHAAAPCPVPVKQAMIDWWGPVLYEYYAGS 305 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADG-SELPPNQPGEIYFEGGYPFEYLND 398 E +G T I++ DWLTH GSVG+PI G VHI+G D +EL + G I+FE FEY D Sbjct 306 EGNGMTFISSTDWLTHKGSVGRPILGAVHIMGEDNETELGVGEEGTIFFESENVFEYHGD 365 Query 399 PAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKV 458 KTA+SRN GW T+GDVG LD++G+L+LT R+ MIISGGVNIYPQE EN LV HPKV Sbjct 366 DEKTASSRNSKGWSTLGDVGRLDEEGFLYLTDRKSFMIISGGVNIYPQEIENHLVTHPKV 425 Query 459 LDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQL 518 D AV G P +EMG+ V+A VQ D A+A D EL+A+ R++LS K PR I F L Sbjct 426 ADVAVVGGPHEEMGEEVIAVVQPADMAEAGDALRDELIAYAREKLSGVKIPRRIDFLEAL 485 Query 519 PRTDTGKLYKSGLVEKY 535 PR DTGKLYK L ++Y Sbjct 486 PRHDTGKLYKRLLRDRY 502 >gi|154251304|ref|YP_001412128.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans DS-1] gi|154155254|gb|ABS62471.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans DS-1] Length=517 Score = 496 bits (1276), Expect = 5e-138, Method: Compositional matrix adjust. Identities = 250/499 (51%), Positives = 329/499 (66%), Gaps = 7/499 (1%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DKPA I+ +G ++F EL+ R+N++AH FR AGL+ D +AI M+NN + + WAA+R Sbjct 12 DKPAYIMAATGETVTFKELDERSNQVAHLFRDAGLKPGDAIAIFMDNNVRYYEICWAAQR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAE--HLPGGLPDLLMLAG 159 +GLY+ I++ LTA E AYI ++ GAK S AL T L + HLP ++ G Sbjct 72 AGLYFTCISSRLTAGEIAYIAEDCGAKLFFTSTALAATAEELVKDNHLPKVARKFVV--G 129 Query 160 GGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMP 219 G L G+ +Y P T I DE G + YSSGTTGRPKG+K L + D + Sbjct 130 GALNGYESYEAARDKFPKTRIADETAGTDMLYSSGTTGRPKGVKHPLTGGAIDEVSALAG 189 Query 220 -ALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVT 278 A+L + MD ++YLSPAP+YH AP W+M+ G T VVME FDAE +L I++Y+ T Sbjct 190 LAMLLYGMDEKTIYLSPAPLYHAAPLRWSMTVQRLGGTVVVMEHFDAEDSLRCIEKYKAT 249 Query 279 HAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYAS 338 H+Q+VP MFVRMLK+PE VR YD+SS++ IHAAAPCP+ +KEQMI WWGP+I EYYA Sbjct 250 HSQWVPTMFVRMLKMPEDVRKKYDVSSMKVAIHAAAPCPIPVKEQMIEWWGPVIYEYYAG 309 Query 339 SEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLND 398 SE +G T + +E+WL H GSVGKP+ HI +G+ELP + G IYFE FEY ND Sbjct 310 SEGNGFTALNSEEWLAHKGSVGKPLNAIAHICDDEGNELPVGEAGTIYFESDSQFEYHND 369 Query 399 PAKTAASR--NKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHP 456 P KT SR N W T+GD+G +D++GYL+LT R+ MIISGGVNIYPQEAEN+LV HP Sbjct 370 PKKTQESRHPNHPTWSTLGDIGKVDEEGYLYLTDRKAFMIISGGVNIYPQEAENILVMHP 429 Query 457 KVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEP 516 KV D AV GVP+++ G+ V A VQ D ++A EL+ + + LS KCPRSI F+ Sbjct 430 KVADVAVIGVPNEDFGEEVKAIVQPADWSEAGPALEAELMEFCKKNLSAIKCPRSIDFQE 489 Query 517 QLPRTDTGKLYKSGLVEKY 535 +LPR TGKLYK + ++Y Sbjct 490 ELPRHPTGKLYKRLIRDRY 508 >gi|194291366|ref|YP_002007273.1| acyl-CoA synthetase [Cupriavidus taiwanensis LMG 19424] gi|193225270|emb|CAQ71212.1| Acetyl-CoA synthetase; ATP-DEPENDENT AMP-BINDING ENZYME FAMILY-RELATED [Cupriavidus taiwanensis LMG 19424] Length=515 Score = 491 bits (1263), Expect = 2e-136, Method: Compositional matrix adjust. Identities = 265/510 (52%), Positives = 343/510 (68%), Gaps = 13/510 (2%) Query 35 IRPYIGA----DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNE 90 + P+I A DK AVI+ SG V+++ EL+ R+N++AH FR+ GL+ D VA ++EN+ Sbjct 1 MHPHIHAQRTPDKAAVIMGGSGAVVTYRELDQRSNQVAHLFRKLGLKPGDRVAFMVENHA 60 Query 91 HVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGG 150 + + W A+RSG+ Y+ ++T L A++AAYIV++SGA+ +V + A E LA P Sbjct 61 RMFELCWGAQRSGIVYICLSTRLNAADAAYIVNDSGARVLVTTHAQAEIAAALAGQTPA- 119 Query 151 LPDLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVS 210 L LML G + G+ TY +AD P T I+DE G + YSSGTTGRPKG+ P S Sbjct 120 LQARLML-DGTVPGYETYENALADCPATRIDDEVTGGDMLYSSGTTGRPKGVY--APPSS 176 Query 211 PDA-APGMMPALLD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEG 267 PD AP + AL + DAD+ YLSPAP+YH AP +TMS A G T VVME FDAE Sbjct 177 PDIDAPTTLTALCQRLYGFDADTRYLSPAPLYHAAPLRYTMSVQALGGTAVVMEHFDAEQ 236 Query 268 ALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHW 327 L +Q++R+TH Q VP MF RMLKLPEA R +YD+SSLR IHAAAPCPVQ+KE MI W Sbjct 237 FLRLVQQHRITHTQLVPTMFSRMLKLPEAQRQTYDVSSLRVAIHAAAPCPVQVKEAMIAW 296 Query 328 WGPIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYF 387 WGP+I EYYA +E +G T++ WL G+VG+ + G + I G DG+ LPP +PG IYF Sbjct 297 WGPVIWEYYAGTEGNGVTVVDTPQWLERKGTVGRAMVGKLRICGPDGALLPPGEPGTIYF 356 Query 388 EGGYPFEYLNDPAKTAASRNKH--GWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYP 445 G PF Y ND AKTA +R+ W T+GDVGY+D DGYL+LT R+ +MIISGGVNIYP Sbjct 357 AEGRPFSYHNDAAKTAETRHPQHPDWSTIGDVGYVDADGYLYLTDRKANMIISGGVNIYP 416 Query 446 QEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSH 505 QEAENLL+ HPKV+D AV GVP+++ G+ V A VQ D A + A EL+A+ R LS Sbjct 417 QEAENLLMTHPKVMDVAVIGVPNEDFGEEVKAVVQPADMGQAGPELAAELIAFCRANLSA 476 Query 506 FKCPRSIAFEPQLPRTDTGKLYKSGLVEKY 535 KCPRS+ FE +LPR TGKL K L ++Y Sbjct 477 IKCPRSVDFESELPRLPTGKLLKRLLRDRY 506 >gi|87201173|ref|YP_498430.1| long-chain-fatty-acid--CoA ligase [Novosphingobium aromaticivorans DSM 12444] gi|87136854|gb|ABD27596.1| AMP-dependent synthetase and ligase [Novosphingobium aromaticivorans DSM 12444] Length=516 Score = 488 bits (1255), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 248/497 (50%), Positives = 330/497 (67%), Gaps = 7/497 (1%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 D+ AVI+ SG V+++ ELEAR+NR A R GL+ D +A+ +EN + W A+R Sbjct 14 DRAAVIMGGSGEVMTYAELEARSNRFAQLMRARGLQIGDTIALCLENRADYFPIAWGAQR 73 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 +GL YV I++ L A E AYI +SG++ ++GSA +A+ PG +P L + G Sbjct 74 AGLVYVAISSRLAAPEIAYIAKDSGSRLLIGSAYTAPVLDEVAKLEPG-VPQLRLDTDGP 132 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPAL 221 L + +A+ PDTPI+DER G + YSSGTTG+PKG++ LP A + A+ Sbjct 133 L----SLDAAMAEMPDTPIDDERAGCDMLYSSGTTGKPKGVRIPLPEDPEIGAANSLMAI 188 Query 222 LD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 + F + D+VYLSPAP+YH AP W+M+ G T V MEKFD E AL+ I++++VT Sbjct 189 ANQAFGIGGDAVYLSPAPLYHAAPLRWSMTIHRLGGTVVAMEKFDPEHALELIEKHKVTD 248 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q+VP FVRMLKLP+ VR+ YD SSL+ IHAAAPCPV +K+ MI WWGP + EYYA + Sbjct 249 SQWVPTHFVRMLKLPDEVRSKYDTSSLKLAIHAAAPCPVPVKQAMIEWWGPALREYYAGT 308 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDP 399 E +G T I++E+WL PGSVG+ + G + I +G E+PP G+++FEGG PF Y NDP Sbjct 309 EGNGFTFISSEEWLKRPGSVGRALLGTIRICDENGDEVPPRTEGQVFFEGGSPFSYHNDP 368 Query 400 AKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVL 459 KT + NKHGW ++GDVG++D+DGYLFLT R+ MIISGGVNIYPQE ENLLV HPKV Sbjct 369 DKTRDATNKHGWTSLGDVGWVDEDGYLFLTDRKSFMIISGGVNIYPQEIENLLVTHPKVA 428 Query 460 DAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLP 519 D AV G PD +MG+RV+A VQ D A+A A EL WL +LS K PR I F +LP Sbjct 429 DVAVIGAPDPDMGERVVAVVQPRDMAEAGPALAAELTEWLAPQLSRVKMPRQIDFRAELP 488 Query 520 RTDTGKLYKSGLVEKYS 536 R TGKL+K L ++Y Sbjct 489 REPTGKLFKRLLRDEYK 505 >gi|167645312|ref|YP_001682975.1| long-chain-fatty-acid--CoA ligase [Caulobacter sp. K31] gi|167347742|gb|ABZ70477.1| AMP-dependent synthetase and ligase [Caulobacter sp. K31] Length=512 Score = 487 bits (1253), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 252/506 (50%), Positives = 328/506 (65%), Gaps = 8/506 (1%) Query 35 IRPYIGA----DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNE 90 + P+I A DKPA I+ SG +++ +L+AR+N+ A FR GL+ DV+AILM+N+ Sbjct 1 MHPFIHAQTQPDKPAYIMAGSGETVTYGQLDARSNQGAQLFRSLGLKAGDVIAILMDNSP 60 Query 91 HVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGG 150 + WAA+R+GLYY ++T LT +E YIV + GA+ ++ S AL + +A +PG Sbjct 61 RFFEIAWAAQRAGLYYTCVSTKLTPAEVEYIVKDCGAQVLIVSPALDDVAQAVAPLIPG- 119 Query 151 LPDLLMLAGGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVS 210 L GGG + + P TPI DE G + YSSGTTGRPKG+K L Sbjct 120 --VRLFRVGGGKGAFEDFEAARDAMPATPIADETSGSDMLYSSGTTGRPKGVKPALTGGP 177 Query 211 PDAAPGM-MPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGAL 269 DA + M A+ F DSVYLSPAP+YH AP W M+ G T +VMEKFD E AL Sbjct 178 IDAPHALQMMAMGLFGFSGDSVYLSPAPLYHAAPLRWCMTVQKLGGTVIVMEKFDPEAAL 237 Query 270 DAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWG 329 I++Y+VT QFVP FVRMLKLPEAVR YD+SS++ +HAAAPCPV +KEQMI WWG Sbjct 238 ALIEKYKVTCGQFVPTHFVRMLKLPEAVRAKYDVSSIKSAVHAAAPCPVPVKEQMIAWWG 297 Query 330 PIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEG 389 P+I EYYA +E +G I +++WLTH GSVG+ + G + I DG+ +PP G +YF Sbjct 298 PVIFEYYAGTEGNGFCWINSQNWLTHKGSVGQAVLGELRICDEDGNPVPPRTEGTVYFAN 357 Query 390 GYPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAE 449 G Y N P KTA S N+HGW T+GDVG++D++GYL+LT R+ MIISGGVNIYPQE E Sbjct 358 GPAVNYHNAPDKTAESYNQHGWTTLGDVGWVDEEGYLYLTDRKSFMIISGGVNIYPQEIE 417 Query 450 NLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCP 509 NLL+ HPKV DAAV G P +EMG++V+A +Q +D A+ A EL A+ R LSH K P Sbjct 418 NLLITHPKVADAAVVGAPHEEMGEQVVAVIQPMDWAEDQTDLAQELAAFCRANLSHVKSP 477 Query 510 RSIAFEPQLPRTDTGKLYKSGLVEKY 535 R I F +LPR TGKLYK + + Y Sbjct 478 RRIDFMQELPRHATGKLYKRLIRDAY 503 >gi|254481258|ref|ZP_05094503.1| AMP-binding enzyme, putative [marine gamma proteobacterium HTCC2148] gi|214038421|gb|EEB79083.1| AMP-binding enzyme, putative [marine gamma proteobacterium HTCC2148] Length=517 Score = 486 bits (1252), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 247/497 (50%), Positives = 331/497 (67%), Gaps = 7/497 (1%) Query 43 KPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRS 102 KPA+I+ SG ++++ +L+ R+N+ A FR GL+ D +A++MENN + WAA+RS Sbjct 14 KPAIIMGGSGEMVTYRQLDERSNQGAQLFRSLGLKAGDHIALMMENNARFLEICWAAQRS 73 Query 103 GLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGL 162 GL + PI THL E Y++ N GA +GS L+E E G + ++ GG Sbjct 74 GLIFTPIATHLKRDETEYVLSNCGASLFIGSHPLKEAAIHAKEDASG--VEHFLMVGGIT 131 Query 163 VGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALL 222 G+ ++ E ++ Q PIEDE+ G + YSSGTTG+PKG+ P D P M A L Sbjct 132 DGFDSWEEALSLQAVAPIEDEKNGVPMLYSSGTTGQPKGVLVPPPSEEVDTPP--MAARL 189 Query 223 D--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHA 280 F ++VYLSPAP+YH AP + M L G TTVVMEKFD EGAL I +R TH+ Sbjct 190 GQLFGFGEETVYLSPAPLYHAAPLHYNMMTLYQGGTTVVMEKFDPEGALALIAEHRATHS 249 Query 281 QFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSE 340 Q+VP MF+RMLKLP+ VR+ +D+SS++ IHAAAPCP+++K MI WWGP+I EYYA+SE Sbjct 250 QWVPIMFIRMLKLPQEVRDRHDVSSMQFAIHAAAPCPIEVKASMIDWWGPVIVEYYAASE 309 Query 341 ASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYP-FEYLNDP 399 G+T+I ++ WL H GSVG + G +HIV DGSELP + G +YF G F Y + Sbjct 310 GIGATMIDSQGWLLHRGSVGPAVSGELHIVSDDGSELPVGEIGTVYFGGEQAVFHYHQED 369 Query 400 AKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVL 459 KTA + +K GW T GDVGYLD+DG+L+LT R++ MIISGGVN+YPQE ENLL+ H KV Sbjct 370 EKTAGAYSKEGWATTGDVGYLDEDGFLYLTDRKNFMIISGGVNVYPQEIENLLITHDKVA 429 Query 460 DAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLP 519 D AVFG+P DE G++V A VQ ++ ADA D+ A E++ WLR+RLSH K P+++ F P LP Sbjct 430 DVAVFGLPCDEFGEKVQAVVQPMNWADATDETAIEIMEWLRERLSHIKLPKALDFHPSLP 489 Query 520 RTDTGKLYKSGLVEKYS 536 R D GKLYK L+E+Y Sbjct 490 RLDNGKLYKRHLMEEYK 506 >gi|295690709|ref|YP_003594402.1| AMP-dependent synthetase and ligase [Caulobacter segnis ATCC 21756] gi|295432612|gb|ADG11784.1| AMP-dependent synthetase and ligase [Caulobacter segnis ATCC 21756] Length=512 Score = 486 bits (1251), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 252/498 (51%), Positives = 322/498 (65%), Gaps = 8/498 (1%) Query 41 ADKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAAR 100 ADK A I+ SG +++ +L+A +N+ AH FR GL+ DV+A++MENN + WAA+ Sbjct 11 ADKAAYIMAGSGETVTYGQLDASSNQGAHLFRSLGLQRGDVIALMMENNARYFEIAWAAQ 70 Query 101 RSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGG 160 R+GLY+V ++T LTA+EA YI+++ GAK + S A+ +A+ LPG L GG Sbjct 71 RAGLYFVCVSTKLTAAEAEYILEDCGAKVFITSPAMGPVIDEIAKALPG---LTLYAVGG 127 Query 161 GLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIK---RELPHVSPDAAPGM 217 + A P TPI DE G + YSSGTTGRPKG+K +LP +P A M Sbjct 128 AHSPCADFEAARAPMPTTPIADESAGSDMLYSSGTTGRPKGVKPALSDLPIDAPHALQMM 187 Query 218 MPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRV 277 L F DSVYLSPAP+YH AP W M G T +VMEK++ E AL I++Y+V Sbjct 188 AQGLFGF--TGDSVYLSPAPLYHAAPLRWCMVVHKLGGTVIVMEKYEPEAALALIEKYKV 245 Query 278 THAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYA 337 T QFVP FVRMLKLPE VR YD+SS+R IHAAAPCPV +KEQMI WWGP+I EYYA Sbjct 246 TCGQFVPTHFVRMLKLPEDVRTKYDVSSMRSAIHAAAPCPVPVKEQMIAWWGPVIYEYYA 305 Query 338 SSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLN 397 +E +G I AE+WLTH GSVG+ + G + I +G LPP G +YF G Y N Sbjct 306 GTEGNGFCWINAENWLTHKGSVGQAVLGELRICDENGDPLPPRTEGTVYFANGPAVNYHN 365 Query 398 DPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPK 457 P KTA S NKHGW T+GDVG++D++GYL+LT R+ MIISGGVNIYPQE ENLL+ HPK Sbjct 366 APEKTAESYNKHGWTTLGDVGWVDEEGYLYLTDRKSFMIISGGVNIYPQEIENLLITHPK 425 Query 458 VLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQ 517 V DAAV G P +EMG++V+A +Q ++ D A EL+ + R LSH K PR I F + Sbjct 426 VADAAVVGAPCEEMGEKVVAVIQPMNFGDDQVALAEELMTFARANLSHVKSPRRIDFMAE 485 Query 518 LPRTDTGKLYKSGLVEKY 535 LPR TGKLYK + + Y Sbjct 486 LPRHPTGKLYKRLIRDAY 503 >gi|334342883|ref|YP_004555487.1| o-succinylbenzoate--CoA ligase [Sphingobium chlorophenolicum L-1] gi|334103558|gb|AEG50981.1| o-succinylbenzoate--CoA ligase [Sphingobium chlorophenolicum L-1] Length=510 Score = 485 bits (1249), Expect = 7e-135, Method: Compositional matrix adjust. Identities = 257/501 (52%), Positives = 329/501 (66%), Gaps = 15/501 (2%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DKPA+IL P G +++ EL+AR+N+ AH FR GL+ D +A+ +EN + WAA+R Sbjct 12 DKPAIILTPGGRTVTYGELDARSNQGAHLFRSLGLKPGDAIALCLENTPAFLEIAWAAQR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLP----DLLML 157 SGLY+V ++T L A E AYI+ +SGAK V S +L + LPG L DLL Sbjct 72 SGLYFVAVSTKLQADEVAYILTDSGAKLFVTSTSLGD--------LPGQLLARRLDLLHF 123 Query 158 A-GGGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPG 216 A G + G+ + A QP TPI DE+ G + YSSGTTGRPKGIK P P Sbjct 124 ALGEAMEGYRDFLAERAAQPPTPIADEQAGFDMLYSSGTTGRPKGIKPRAIAGEPITTPD 183 Query 217 MMPALL--DFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQR 274 M L + ADSVY PAP+YH AP +M+ G T ++ EKFD E L AIQ+ Sbjct 184 PMTVALAETYGATADSVYFGPAPLYHAAPLRTSMAVSRLGGTVLLTEKFDPETVLAAIQQ 243 Query 275 YRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDE 334 +RVT QFVP F+RMLKLPE VR YD+SSL+ VIHAAAPCPV +KE M+ W+GPII E Sbjct 244 HRVTVGQFVPTHFIRMLKLPEEVRARYDISSLKTVIHAAAPCPVPVKEAMMAWFGPIIYE 303 Query 335 YYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFE 394 YY+ +E +G T I+ ++WLTH GSVG+P G+HI DG E+PP G +YF GG FE Sbjct 304 YYSGTEGNGGTSISPQEWLTHKGSVGRPRTIGLHICDEDGREVPPRTEGMVYFSGGPGFE 363 Query 395 YLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVA 454 Y ND AKT SR+ +GW T+GD+G++D+DGYL+LT R+ MIISGGVNIYPQE ENLL+ Sbjct 364 YHNDAAKTQESRHPNGWTTLGDIGWVDEDGYLYLTDRKSFMIISGGVNIYPQEIENLLIL 423 Query 455 HPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAF 514 HP+V D AV G PD+EMG++V+A VQ +D A+A D A +L+ + R LSH K PR I F Sbjct 424 HPRVADVAVVGAPDEEMGEKVVAVVQPLDWAEAGDALAADLMDYARAHLSHVKSPRRIDF 483 Query 515 EPQLPRTDTGKLYKSGLVEKY 535 +LPR TGKLYK + + Y Sbjct 484 MRELPRHATGKLYKRLIRDSY 504 >gi|16125196|ref|NP_419760.1| acyl-CoA synthetase [Caulobacter crescentus CB15] gi|221233930|ref|YP_002516366.1| long-chain-fatty-acid--CoA ligase [Caulobacter crescentus NA1000] gi|13422218|gb|AAK22928.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963102|gb|ACL94458.1| long-chain-fatty-acid--CoA ligase [Caulobacter crescentus NA1000] Length=512 Score = 485 bits (1248), Expect = 9e-135, Method: Compositional matrix adjust. Identities = 260/511 (51%), Positives = 330/511 (65%), Gaps = 18/511 (3%) Query 35 IRPYIGA----DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNE 90 + PY+ A DK A I+ SG V+++ +L+AR+N+ AH FR GL DV+AILMENN Sbjct 1 MHPYLHAQSQGDKAAYIMAGSGEVVTYAQLDARSNQGAHLFRSLGLVPGDVIAILMENNA 60 Query 91 HVHAVMWAARRSGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGG 150 V WAA+RSGLY+V I+T LTASEA YI+ + GAK + S A+ +A +PG Sbjct 61 RFFEVAWAAQRSGLYFVCISTKLTASEAEYILQDCGAKVFITSTAMGPMIDEIAALVPG- 119 Query 151 LPDLLMLAGGGLVGWMTYPECVA---DQPDTPIEDEREGDLLQYSSGTTGRPKGIKREL- 206 L + GG G Y + VA +P TPI DE G + YSSGTTGRPKG+K L Sbjct 120 ---LSLFTVGGAHG--PYADFVAAREGRPTTPIADESAGTDMLYSSGTTGRPKGVKPALS 174 Query 207 --PHVSPDAAPGMMPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFD 264 P +P+A M L F DS+YLSPAP+YH AP W M+ G T +VMEKF+ Sbjct 175 GGPIDAPNALQMMAQGLFGF--SGDSIYLSPAPLYHAAPLRWCMTVHKLGGTVIVMEKFE 232 Query 265 AEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQM 324 E AL I+++RV QFVP FVRMLKLPEAVR YD+SS++ +HAAAPCP+ +KEQM Sbjct 233 PETALALIEQHRVNCGQFVPTHFVRMLKLPEAVRAKYDVSSMKSAVHAAAPCPIPVKEQM 292 Query 325 IHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGE 384 I WWGP+I EYYA +E +G I +++WLTH GSVG+ + G + I G +PP G Sbjct 293 IAWWGPVIFEYYAGTEGNGFCWINSQNWLTHKGSVGQAVLGELRICDEAGDPVPPRTEGT 352 Query 385 IYFEGGYPFEYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIY 444 +YF G Y N P KTA S NKHGW T+GDVG+ D+DG+L+LT R+ MIISGGVNIY Sbjct 353 VYFANGPAVNYHNAPDKTAESYNKHGWTTLGDVGWADEDGFLYLTDRKSFMIISGGVNIY 412 Query 445 PQEAENLLVAHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLS 504 PQE ENLL+ HPKV DAAV G P +EMG++V+A +Q +D D A EL+A+ R LS Sbjct 413 PQEIENLLITHPKVADAAVVGAPHEEMGEQVVAVIQPMDLGDDQVALAEELMAFARANLS 472 Query 505 HFKCPRSIAFEPQLPRTDTGKLYKSGLVEKY 535 H K PR I F +LPR TGKLYK + + Y Sbjct 473 HVKSPRRIDFMAELPRHPTGKLYKRLIRDAY 503 >gi|103486402|ref|YP_615963.1| AMP-dependent synthetase and ligase [Sphingopyxis alaskensis RB2256] gi|98976479|gb|ABF52630.1| AMP-dependent synthetase and ligase [Sphingopyxis alaskensis RB2256] Length=515 Score = 483 bits (1242), Expect = 5e-134, Method: Compositional matrix adjust. Identities = 255/500 (51%), Positives = 334/500 (67%), Gaps = 8/500 (1%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 D+PA+++ SG +S+ LE ANR A FR G+ D +A+ ++N + WAA+R Sbjct 12 DRPAIVMAASGETVSYSALENVANRGAQLFRSLGIATGDTIALWLKNCRDYFEIYWAAQR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAG-- 159 +GLY PI THLT EAAYI+++SGA ++ A + ++E +PD+ + G Sbjct 72 AGLYVCPIATHLTVEEAAYILNDSGACLLITHADVAAAPDLVSER-QRLIPDVRHIFGLE 130 Query 160 GGLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMP 219 G+ G+ ++ + P PI DE G L YSSGTTGRPKGI+ L + DA P M+ Sbjct 131 AGMDGFPSWRAALTGFPSKPIADETAGYHLVYSSGTTGRPKGIRLPLSGEAADA-PHMLG 189 Query 220 ALL--DFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRV 277 + + + DSV LSPAP+YHTAP V+ M A G T +VM+ FDAE L I+R+RV Sbjct 190 DRVAGRYGVGEDSVILSPAPLYHTAPLVYGMVAHRLGATLIVMDHFDAEDMLRLIERHRV 249 Query 278 THAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYA 337 T Q VP MFVR+L LP R YD+SSL++++HAAAPCPV+IK +MI W GPII EYY Sbjct 250 TFIQMVPTMFVRLLALPGTTRAQYDLSSLQKIVHAAAPCPVEIKRRMIDWLGPIIYEYYG 309 Query 338 SSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLN 397 SE +GST IT ++WL HPGSVG+ G +HI +G+E+PP G IYFEGG+ F+YLN Sbjct 310 GSEGNGSTFITPQEWLEHPGSVGRADWGTLHICDEEGNEVPPGVDGLIYFEGGWDFQYLN 369 Query 398 DPAKTAASRN-KH-GWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAH 455 DP KT +R+ +H W T+GD+G++D DGYL+LT R+ MIISGGVNIYPQE ENLL+ H Sbjct 370 DPEKTRDARHPRHPAWSTLGDIGHVDKDGYLYLTDRKGFMIISGGVNIYPQEVENLLITH 429 Query 456 PKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFE 515 P+V DAAV GVP E G+ V A VQ +D ADA D+FA ELL + R RLSH KCPRSI F+ Sbjct 430 PRVADAAVIGVPSAEFGEAVKAVVQPLDPADATDEFAEELLRFCRARLSHVKCPRSIDFD 489 Query 516 PQLPRTDTGKLYKSGLVEKY 535 P LPR DTGKLYK + ++Y Sbjct 490 PALPRLDTGKLYKRSIRDRY 509 >gi|329894367|ref|ZP_08270237.1| Long-chain-fatty-acid--CoA ligase [gamma proteobacterium IMCC3088] gi|328923163|gb|EGG30486.1| Long-chain-fatty-acid--CoA ligase [gamma proteobacterium IMCC3088] Length=521 Score = 482 bits (1241), Expect = 6e-134, Method: Compositional matrix adjust. Identities = 253/503 (51%), Positives = 332/503 (67%), Gaps = 15/503 (2%) Query 43 KPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRS 102 KPAVI+ SG + +++E + +N++A FR G+ D VA++MENN H + W A RS Sbjct 14 KPAVIMANSGEITTYEEFDQHSNQVAQLFRTLGVHAGDHVALMMENNAHFLEICWGAYRS 73 Query 103 GLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGL 162 G+ + PI+THL A E AYI+ N AK V S LR+ L + + G+ M GG Sbjct 74 GVIFTPISTHLKAEEIAYILQNCEAKVFVISHRLRDQAADLLQ-VASGIEHRYMF-GGIA 131 Query 163 VGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAA---PGMMP 219 G+ ++ E + P PI+D+ +G + YSSGTTG+PKG+ LP V+PDAA P + Sbjct 132 KGYESWDEVLDQMPREPIDDQSKGTAMLYSSGTTGKPKGV---LP-VTPDAAYDSPHPLG 187 Query 220 ALLD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRV 277 A L F ++ YLSPAP+YH AP ++M G T VVMEKFDAE AL AI+RY V Sbjct 188 ASLGVFFGFSDETTYLSPAPLYHAAPLHYSMMTQDMGGTVVVMEKFDAEAALAAIERYEV 247 Query 278 THAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYA 337 TH+Q+VP MFVR+LKLP +R YD+S+ R IHAAAPCPV+IK+QMI WWGPII+EYYA Sbjct 248 THSQWVPIMFVRLLKLPAEIRAKYDLSTHRFAIHAAAPCPVEIKQQMIDWWGPIINEYYA 307 Query 338 SSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEG----GYPF 393 +SE+ G+TLIT+ +WL H GSVG+ G +HI+ DG+ELP + G +YFE G F Sbjct 308 ASESIGATLITSPEWLEHKGSVGRVTAGKLHILDDDGNELPVGEVGTVYFEAAATLGARF 367 Query 394 EYLNDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLV 453 EY +P KTA + T GDVGY+D++GYL+LT R+H IISGGVNIYPQE EN L+ Sbjct 368 EYYKEPEKTAEAYLNDALATTGDVGYVDEEGYLYLTDRKHFTIISGGVNIYPQEIENTLI 427 Query 454 AHPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIA 513 H V D AVFGVPD+E G+RV A V+ + DA D+ A EL+ WL++RLS K P++I Sbjct 428 NHDLVADVAVFGVPDEEFGERVHAVVEPENWVDATDEVAIELVEWLKERLSSIKVPKAID 487 Query 514 FEPQLPRTDTGKLYKSGLVEKYS 536 F +LPR D GKLYK LV+ Y Sbjct 488 FMEKLPRMDNGKLYKRHLVDAYK 510 >gi|119503304|ref|ZP_01625388.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080] gi|119460950|gb|EAW42041.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080] Length=511 Score = 482 bits (1240), Expect = 8e-134, Method: Compositional matrix adjust. Identities = 246/497 (50%), Positives = 328/497 (66%), Gaps = 8/497 (1%) Query 43 KPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRS 102 KPA I+ SG ++++ ELEAR+N++AH FR GL+ D VAI++EN + A RS Sbjct 14 KPAFIMANSGEMVTYGELEARSNQIAHLFRLCGLKSGDHVAIMVENCRQFLEITTGAMRS 73 Query 103 GLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDL--LMLAGG 160 G+ + PI+THL E AYI++N GAK V S +L +A H+ G L + GG Sbjct 74 GIIFTPISTHLKEDETAYILENCGAKLFVASHSLA----SVAVHMIGSAAALKHFYMIGG 129 Query 161 GLVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGI-KRELPHVSPDAAPGMMP 219 G++++ E V P T I+D+ G + YSSGTTG+PKG+ + V + P + Sbjct 130 IEDGFLSWEETVDTLPITAIDDQSMGTTMLYSSGTTGKPKGVYNKPYTEVFDEPLPLTLS 189 Query 220 ALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 F ++ YLSPAP+YH AP + M L G T+++MEKF+A AL+ I+ +R+TH Sbjct 190 LGAAFGFGPETTYLSPAPLYHAAPLHYNMVVLDTGGTSIIMEKFNALRALEIIEEHRITH 249 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q+VP MFVRMLKLPEA R +D SS++ IHAAAPCP+ +KEQMI WWGP+I EYY+SS Sbjct 250 SQWVPIMFVRMLKLPEAQRTQFDTSSMQMAIHAAAPCPIDVKEQMIDWWGPVILEYYSSS 309 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEG-GYPFEYLND 398 E +G TLI + DWL H GSVG+P+ G H++ +G+ELP + G I+F FEY N+ Sbjct 310 EGAGFTLIDSNDWLNHKGSVGRPLFGVPHVLDEEGNELPAGEVGGIWFSDIANKFEYHNE 369 Query 399 PAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKV 458 P KTA + NK GW +VGD+GYLD++GYL+LT R++ IISGGVNIYP E ENLL+ H KV Sbjct 370 PDKTAEAYNKDGWTSVGDMGYLDEEGYLYLTDRKNFTIISGGVNIYPAEIENLLINHAKV 429 Query 459 LDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQL 518 D AVFGVP DE G+ V A VQ + DA D+ A EL WL++RLSH K PR++ F QL Sbjct 430 ADVAVFGVPCDEFGETVQAVVQPANWGDATDETALELKEWLQERLSHIKIPRNLDFMEQL 489 Query 519 PRTDTGKLYKSGLVEKY 535 PR D GKLYK L+E Y Sbjct 490 PRMDNGKLYKRHLMEAY 506 >gi|111020945|ref|YP_703917.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1] gi|110820475|gb|ABG95759.1| probable O-succinylbenzoate--CoA ligase [Rhodococcus jostii RHA1] Length=514 Score = 481 bits (1239), Expect = 1e-133, Method: Compositional matrix adjust. Identities = 256/502 (51%), Positives = 324/502 (65%), Gaps = 11/502 (2%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DKPAVI+ +G ++F ELE+R+ R+A GLR D VA+L N + + WAA R Sbjct 12 DKPAVIMAGTGQTVTFAELESRSVRIARHLHALGLRRGDHVAVLATNTPAIFDIYWAAMR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 SGLY N HLT E AYIV++ GAKA++ AAL H L P L GG Sbjct 72 SGLYLTMANWHLTPPEIAYIVEDCGAKALIVDAALDAVAHDLTALTPATEHRLAF--GGT 129 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELP----HVSPDAAPGM 217 + G+ + A + D P+ D+ G + YSSGTTGRPKGIK ELP H D GM Sbjct 130 IPGYNSLDRAAAAESDVPLPDQPRGADMLYSSGTTGRPKGIKPELPVRQIHEPGDTMTGM 189 Query 218 MPALLDFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRV 277 + + + D+VYLSPAP+YH AP S A G T VVM++FDAE AL I++YRV Sbjct 190 NATV--WGVTPDTVYLSPAPLYHAAPLRTCASVQALGGTVVVMDRFDAEKALAYIEQYRV 247 Query 278 THAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYA 337 T++Q+VP MFVRMLKLP R YD+SSLR +HAAAPCPV++K QMI WWGPI+ EYY+ Sbjct 248 TYSQWVPTMFVRMLKLPAETREKYDVSSLRVAVHAAAPCPVEVKRQMIEWWGPILSEYYS 307 Query 338 SSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFE-GGYPFEYL 396 S+E +G TL+ +++WL PG+VG+ G HI G DG++L P + G +YFE PFEY Sbjct 308 STELNGMTLVNSDEWLRKPGTVGRAALGVAHICGDDGADLAPGEIGTLYFERDTLPFEYH 367 Query 397 NDPAKTAASRNKH--GWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVA 454 N PAKT +++ W T GDVGYLD+DGYLFLT R+ MIISGGVNIYPQE EN L Sbjct 368 NAPAKTRDAQHPQHPTWTTTGDVGYLDEDGYLFLTDRKSFMIISGGVNIYPQEIENTLTE 427 Query 455 HPKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAF 514 HP VLD AV G+PD+EMG+ V+A VQTV +D AGELL +R RL+ FK PR++ F Sbjct 428 HPAVLDVAVIGIPDEEMGESVLAVVQTVPGVIGDDALAGELLDHVRGRLARFKVPRNVVF 487 Query 515 EPQLPRTDTGKLYKSGLVEKYS 536 LPRT TGKL K L ++Y+ Sbjct 488 SDDLPRTPTGKLVKGTLRDRYA 509 >gi|54025067|ref|YP_119309.1| long-chain-fatty-acid--CoA ligase [Nocardia farcinica IFM 10152] gi|54016575|dbj|BAD57945.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152] Length=510 Score = 481 bits (1238), Expect = 1e-133, Method: Compositional matrix adjust. Identities = 260/500 (52%), Positives = 326/500 (66%), Gaps = 8/500 (1%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DKPA+I+ SG V+++ ELE + RLA R AGLR D +A+L N+ V+ V WAA R Sbjct 12 DKPALIMAESGEVLTYRELEDNSVRLARHLRAAGLRPGDHLALLSGNDPKVYEVYWAALR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 SGLY +N HL+ SE +YIVD+ GA+A++ SAAL E+ + P ++ + GG Sbjct 72 SGLYITAVNRHLSPSEISYIVDDCGARALIVSAALAESAEKVVAETPA--VEIRLAFGGD 129 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPG-MMPA 220 + G +Y + +A P+ D+ G + YSSGTTGRPKGIK+ LP APG A Sbjct 130 VPGHASYEDALAASSPEPLSDQPRGADMLYSSGTTGRPKGIKQPLPQRQVGDAPGDTYTA 189 Query 221 LLD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVT 278 + + ++VYLSPAP+YH AP + A G T VVMEKFDAE AL AI+RYRVT Sbjct 190 IFGPLYGFGTETVYLSPAPLYHAAPLRFGGVVHALGGTVVVMEKFDAEAALAAIERYRVT 249 Query 279 HAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYAS 338 H+Q+VP MFVRMLKL E VR YD+SSL+ +HAAAPCP+ +K MI WWGPI+ EYYAS Sbjct 250 HSQWVPTMFVRMLKLDEQVRTRYDVSSLKVAVHAAAPCPIDVKRAMIDWWGPILHEYYAS 309 Query 339 SEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFE-GGYPFEYLN 397 +EA+G+T I +E WL PGSVGK G + I G DG ELP + G +YFE PF Y N Sbjct 310 TEANGATFIDSEQWLRKPGSVGKAGLGVIRICGEDGKELPTGEVGTVYFEREDVPFAYHN 369 Query 398 DPAKTA-ASRNKH-GWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAH 455 DPAKTA A H W T GD+GY+DD+GYLFLT R+ MIISGGVNIYPQE E+ L H Sbjct 370 DPAKTADAVHPDHPTWTTTGDIGYVDDEGYLFLTDRKAFMIISGGVNIYPQEIEDALALH 429 Query 456 PKVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFE 515 PKV D AV GVPD+EMG+ V A VQ A+ A EL +LR+R++H+K PRS F Sbjct 430 PKVFDVAVIGVPDEEMGESVKAVVQPAPGAEPGPDLAAELRDYLRERIAHYKVPRSFDFA 489 Query 516 PQLPRTDTGKLYKSGLVEKY 535 LPRT TGKL K L +Y Sbjct 490 DDLPRTPTGKLVKGKLRARY 509 >gi|85375292|ref|YP_459354.1| long-chain-fatty-acid--CoA ligase [Erythrobacter litoralis HTCC2594] gi|84788375|gb|ABC64557.1| hypothetical protein ELI_12325 [Erythrobacter litoralis HTCC2594] Length=512 Score = 481 bits (1238), Expect = 1e-133, Method: Compositional matrix adjust. Identities = 247/500 (50%), Positives = 330/500 (66%), Gaps = 11/500 (2%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 D PAVI+ +G ++F E++A +NR AH R G+ D+ A+L+EN + ++W ++R Sbjct 12 DHPAVIMAGTGETVTFGEMDAASNRFAHLLRARGIGHDEAFAVLLENRAEFYTLIWGSQR 71 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 +G VPI+T LTA E AYI+ +S AK ++ S A + G+ LP L+M G Sbjct 72 AGTMLVPISTRLTAPEIAYILKDSEAKLLITSTAFDDVMQGIRAEC-SDLPVLMMDGEGD 130 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD---AAPGMM 218 + + QP PI+D+R G ++ YSSGTTGRPKGI R P PD A P M Sbjct 131 ----EDFAAALDAQPSEPIDDQRAGLVMLYSSGTTGRPKGI-RPAPPEDPDPLAANPLMG 185 Query 219 PALLDFWMDADS--VYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYR 276 A++ M AD VYLSPAP+YH AP W+ + G T V+M KFD E AL+AI++Y+ Sbjct 186 LAIMGAGMPADGSMVYLSPAPLYHAAPIGWSSTVHRLGGTVVMMAKFDPETALEAIEKYK 245 Query 277 VTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYY 336 VT +Q+VP FVRMLKLPE +R YD+SS +R +HAAAPCPV IK+QMI WWGPI++EYY Sbjct 246 VTDSQWVPTHFVRMLKLPEEIRTRYDLSSHQRALHAAAPCPVPIKKQMIEWWGPIVNEYY 305 Query 337 ASSEASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYL 396 A SE G TL+ +EDWLTHPG+VG+ I G +HI G DG E+P G I+FE Y Sbjct 306 AGSEGIGMTLVKSEDWLTHPGTVGRAIHGTLHICGPDGEEVPAGTDGLIFFENDILPTYH 365 Query 397 NDPAKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHP 456 NDP KT + + GW+T+GD+G++D+DG+L+LT R+ HMIISGGVNIYPQE ENLL++HP Sbjct 366 NDPDKTKDAMHPKGWMTLGDIGHVDEDGFLYLTDRKSHMIISGGVNIYPQEIENLLISHP 425 Query 457 KVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEP 516 KV+DAAV G PD ++G++V+A VQ D +DA + F GEL +L LS K PR F P Sbjct 426 KVMDAAVIGAPDPDLGEKVVAVVQPKDMSDAGEAFEGELRDYLAPNLSRIKMPRLFDFRP 485 Query 517 QLPRTDTGKLYKSGLVEKYS 536 LPR GKLYK L ++++ Sbjct 486 DLPREANGKLYKRELRDEFA 505 >gi|316935138|ref|YP_004110120.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris DX-1] gi|315602852|gb|ADU45387.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris DX-1] Length=518 Score = 481 bits (1237), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 243/496 (49%), Positives = 325/496 (66%), Gaps = 4/496 (0%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DK A + +G +++ +L+ R+N+ AH FR GL+ D +A+LMEN + WAA+R Sbjct 13 DKVAYRMASTGQALTYRQLDERSNQGAHLFRSLGLKAGDHIALLMENRLAFMEICWAAQR 72 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 +GLYY I+ +LT E YIV + GAK ++ SA ET L PG L + Sbjct 73 AGLYYTAISRYLTKDEIGYIVQDCGAKVVITSAQGSETMQALLSDAPGA--PLYYMVDQP 130 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPAL 221 + G+ ++ + QP TPI DE G + YSSGTTGRPKGIKRE + D + L Sbjct 131 VAGFRSWEQETTAQPTTPIADEVAGYDMLYSSGTTGRPKGIKREFEGNAIDVPSPFLRLL 190 Query 222 LDFW--MDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 + M+ S+YLSPAP+YH AP + M A G T+++ME FDAE L +++Y+VT Sbjct 191 CEKMCGMNDGSIYLSPAPLYHAAPLRFNMMATTLGGTSIIMEHFDAEQFLALVEKYKVTQ 250 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q VP MFVRMLKLP+AVR+ YD+SSL+ IHAAAPCPV +K +MI WWGPI+ EYYA S Sbjct 251 SQLVPTMFVRMLKLPDAVRSRYDVSSLKGAIHAAAPCPVDVKAKMIEWWGPILIEYYAGS 310 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDP 399 E +G T+ T++ WLTH G+VGK + G + I+ +G E P + G +YF F Y NDP Sbjct 311 EGNGVTVSTSQQWLTHRGTVGKAVVGTIKILDDEGDEQPVGEIGTVYFADAPSFSYHNDP 370 Query 400 AKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVL 459 KT + N+ GW T+GDVGYLDD+G+L+LT R+ +MIISGGVNIYPQE E++L+ HP V Sbjct 371 DKTKKAYNEKGWSTLGDVGYLDDEGFLYLTDRKSYMIISGGVNIYPQETEDVLLTHPDVA 430 Query 460 DAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLP 519 D AVFGVP+ EMG+ V A VQ D A + + A EL+A+ R+RLS KCPRS+ FE +LP Sbjct 431 DVAVFGVPNPEMGEEVKAVVQLRDGAAPSAERAAELIAFCRERLSPIKCPRSVDFEAELP 490 Query 520 RTDTGKLYKSGLVEKY 535 RT TGKL K L ++Y Sbjct 491 RTPTGKLVKRHLKDRY 506 >gi|39934772|ref|NP_947048.1| long-chain-fatty-acid--CoA ligase [Rhodopseudomonas palustris CGA009] gi|39648622|emb|CAE27143.1| putative acyl-CoA ligase [Rhodopseudomonas palustris CGA009] Length=518 Score = 480 bits (1235), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 242/496 (49%), Positives = 325/496 (66%), Gaps = 4/496 (0%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DK A + +G +++ +L+ R+N+ AH FR GL+ D +A+LMEN + WAA+R Sbjct 13 DKVAYRMASTGQALTYRQLDERSNQGAHLFRSLGLKAGDHIALLMENRLAFMEICWAAQR 72 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 +GLYY I+ +LT E YIV + GAK ++ SA ET L PG L + Sbjct 73 AGLYYTAISRYLTKDEIGYIVQDCGAKVVITSAQGSETMKSLLSDGPGA--PLYYMVDPP 130 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPAL 221 G+ ++ + A QP TPI DE G + YSSGTTGRPKGIKRE + D + L Sbjct 131 TAGFRSWEQETAAQPTTPIADEVAGYDMLYSSGTTGRPKGIKREFEGNAIDVPSPFLRLL 190 Query 222 LD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 + M+A+S+YLSPAP+YH AP + M A G T+++ME FDAE L +++Y+VT Sbjct 191 CEKMCGMNAESIYLSPAPLYHAAPLRFNMMATTLGGTSIIMEHFDAEQFLALVEKYKVTQ 250 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q VP MFVRMLKLP+ VR+ YD+S+L+ IHAAAPCPV +K +MI WWGPI+ EYYA S Sbjct 251 SQLVPTMFVRMLKLPDEVRSRYDVSTLKGAIHAAAPCPVDVKAKMIEWWGPILIEYYAGS 310 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDP 399 E +G T+ T++ WL H G+VGK + G + I+ +G E P + G +YF F Y NDP Sbjct 311 EGNGVTVSTSQQWLAHRGTVGKAVVGTIKILDDEGEEQPVGEIGTVYFADAPSFSYHNDP 370 Query 400 AKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVL 459 KT + N+ GW T+GDVGYLDD+G+L+LT R+ +MIISGGVNIYPQE E++L+ HP V Sbjct 371 DKTKKAYNEKGWSTLGDVGYLDDEGFLYLTDRKSYMIISGGVNIYPQETEDVLLTHPDVA 430 Query 460 DAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLP 519 D AVFGVP+ EMG+ V A VQ D A + + A EL+A+ R+RLS KCPRS+ FE +LP Sbjct 431 DVAVFGVPNPEMGEEVKAVVQLRDGAAPSSERAAELIAFCRERLSPIKCPRSVDFEAELP 490 Query 520 RTDTGKLYKSGLVEKY 535 RT TGKL K L ++Y Sbjct 491 RTPTGKLVKRHLKDRY 506 >gi|192290295|ref|YP_001990900.1| long-chain-fatty-acid--CoA ligase [Rhodopseudomonas palustris TIE-1] gi|192284044|gb|ACF00425.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris TIE-1] Length=518 Score = 479 bits (1234), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 242/496 (49%), Positives = 323/496 (66%), Gaps = 4/496 (0%) Query 42 DKPAVILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARR 101 DK A + +G +++ +L+ R+N+ AH FR GL+ D +A+LMEN + WAA+R Sbjct 13 DKVAYRMASTGQALTYRQLDERSNQGAHLFRSLGLKAGDHIALLMENRLAFMEICWAAQR 72 Query 102 SGLYYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGG 161 +GLYY I+ +LT E YIV + GAK ++ SA ET L PG L + Sbjct 73 AGLYYTAISRYLTKDEIGYIVQDCGAKVVITSAQGSETMKSLLSDAPGA--PLYYMVDPP 130 Query 162 LVGWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPAL 221 G+ ++ + A QP TPI DE G + YSSGTTGRPKGIKRE + D + L Sbjct 131 TAGFRSWEQETAAQPTTPIADEVAGYDMLYSSGTTGRPKGIKREFEGNAIDVPSPFLRLL 190 Query 222 LD--FWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTH 279 + M+ +S+YLSPAP+YH AP + M A G T+++ME FDAE L +++Y+VT Sbjct 191 CEKMCGMNVESIYLSPAPLYHAAPLRFNMMATTLGGTSIIMEHFDAEQFLALVEKYKVTQ 250 Query 280 AQFVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASS 339 +Q VP MFVRMLKLP+ VR YD+SSL+ IHAAAPCPV +K +MI WWGPI+ EYYA S Sbjct 251 SQLVPTMFVRMLKLPDEVRCRYDVSSLKGAIHAAAPCPVDVKAKMIEWWGPILIEYYAGS 310 Query 340 EASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDP 399 E +G T+ T++ WL H G+VGK + G + I+ +G E P + G +YF F Y NDP Sbjct 311 EGNGVTVSTSQQWLAHRGTVGKAVVGTIKILDDEGEEQPVGEIGTVYFADAPSFSYHNDP 370 Query 400 AKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKVL 459 KT + N+ GW T+GDVGYLDD+G+L+LT R+ +MIISGGVNIYPQE E++L+ HP V Sbjct 371 DKTKKAYNEKGWSTLGDVGYLDDEGFLYLTDRKSYMIISGGVNIYPQETEDVLLTHPDVA 430 Query 460 DAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQLP 519 D AVFGVP+ EMG+ V A VQ D A + + A EL+A+ R+RLS KCPRS+ FE +LP Sbjct 431 DVAVFGVPNPEMGEEVKAVVQLRDGAAPSSERAAELIAFCRERLSPIKCPRSVDFEAELP 490 Query 520 RTDTGKLYKSGLVEKY 535 RT TGKL K L ++Y Sbjct 491 RTPTGKLVKRHLKDRY 506 Lambda K H 0.319 0.136 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1180538684976 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40