BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0226c Length=576 Score E Sequences producing significant alignments: (Bits) Value gi|15607367|ref|NP_214740.1| transmembrane protein [Mycobacteriu... 1087 0.0 gi|289747995|ref|ZP_06507373.1| transmembrane protein [Mycobacte... 1085 0.0 gi|308231497|ref|ZP_07412653.2| conserved membrane protein [Myco... 1064 0.0 gi|308376340|ref|ZP_07438479.2| putative Tat (twin-arginine tran... 954 0.0 gi|308369337|ref|ZP_07666715.1| conserved membrane protein [Myco... 849 0.0 gi|240168446|ref|ZP_04747105.1| transmembrane protein [Mycobacte... 796 0.0 gi|183980504|ref|YP_001848795.1| transmembrane protein [Mycobact... 736 0.0 gi|3063873|emb|CAA18553.1| putative membrane protein [Mycobacter... 723 0.0 gi|15828388|ref|NP_302651.1| hypothetical protein ML2582 [Mycoba... 723 0.0 gi|118616847|ref|YP_905179.1| transmembrane protein [Mycobacteri... 717 0.0 gi|289441602|ref|ZP_06431346.1| transmembrane protein [Mycobacte... 716 0.0 gi|342859310|ref|ZP_08715964.1| hypothetical protein MCOL_10538 ... 713 0.0 gi|296167456|ref|ZP_06849855.1| transmembrane protein [Mycobacte... 704 0.0 gi|118466442|ref|YP_884064.1| hypothetical protein MAV_4944 [Myc... 649 0.0 gi|41409763|ref|NP_962599.1| hypothetical protein MAP3665c [Myco... 644 0.0 gi|145221026|ref|YP_001131704.1| hypothetical protein Mflv_0422 ... 563 4e-158 gi|315442003|ref|YP_004074882.1| hypothetical protein Mspyr1_033... 561 2e-157 gi|339293290|gb|AEJ45401.1| transmembrane protein [Mycobacterium... 543 4e-152 gi|333988843|ref|YP_004521457.1| transmembrane protein [Mycobact... 537 2e-150 gi|120401275|ref|YP_951104.1| hypothetical protein Mvan_0249 [My... 536 3e-150 gi|118473197|ref|YP_884730.1| transmembrane protein [Mycobacteri... 511 2e-142 gi|108797200|ref|YP_637397.1| hypothetical protein Mmcs_0220 [My... 491 2e-136 gi|126432823|ref|YP_001068514.1| hypothetical protein Mjls_0210 ... 471 2e-130 gi|169631549|ref|YP_001705198.1| hypothetical protein MAB_4475 [... 456 5e-126 gi|333921778|ref|YP_004495359.1| hypothetical protein AS9A_4125 ... 381 2e-103 gi|226304597|ref|YP_002764555.1| hypothetical protein RER_11080 ... 372 1e-100 gi|229494455|ref|ZP_04388218.1| conserved hypothetical protein [... 357 4e-96 gi|226364648|ref|YP_002782430.1| hypothetical protein ROP_52380 ... 341 2e-91 gi|54027448|ref|YP_121690.1| hypothetical protein nfa54740 [Noca... 322 2e-85 gi|312141429|ref|YP_004008765.1| integral membrane protein [Rhod... 317 5e-84 gi|111022155|ref|YP_705127.1| hypothetical protein RHA1_ro05188 ... 315 2e-83 gi|325673150|ref|ZP_08152843.1| transmembrane protein [Rhodococc... 314 2e-83 gi|262204286|ref|YP_003275494.1| hypothetical protein Gbro_4468 ... 308 2e-81 gi|254823263|ref|ZP_05228264.1| hypothetical protein MintA_25259... 305 2e-80 gi|339293291|gb|AEJ45402.1| transmembrane protein [Mycobacterium... 298 2e-78 gi|343924449|ref|ZP_08763998.1| hypothetical protein GOALK_016_0... 284 2e-74 gi|254822664|ref|ZP_05227665.1| hypothetical protein MintA_22234... 282 1e-73 gi|296138151|ref|YP_003645394.1| hypothetical protein Tpau_0414 ... 261 3e-67 gi|296392558|ref|YP_003657442.1| hypothetical protein Srot_0120 ... 234 3e-59 gi|254777381|ref|ZP_05218897.1| hypothetical protein MaviaA2_223... 231 2e-58 gi|326385222|ref|ZP_08206887.1| hypothetical protein SCNU_19862 ... 210 7e-52 gi|306779058|ref|ZP_07417395.1| conserved membrane protein [Myco... 205 2e-50 gi|300789358|ref|YP_003769649.1| hypothetical protein AMED_7534 ... 198 2e-48 gi|330470627|ref|YP_004408370.1| hypothetical protein VAB18032_0... 195 2e-47 gi|145592757|ref|YP_001157054.1| hypothetical protein Strop_0191... 189 1e-45 gi|284031024|ref|YP_003380955.1| hypothetical protein Kfla_3092 ... 180 5e-43 gi|302870419|ref|YP_003839056.1| hypothetical protein Micau_5977... 177 7e-42 gi|159035882|ref|YP_001535135.1| hypothetical protein Sare_0209 ... 176 9e-42 gi|336325126|ref|YP_004605092.1| hypothetical protein CRES_0566 ... 173 6e-41 gi|213965389|ref|ZP_03393585.1| conserved transmembrane protein ... 156 1e-35 >gi|15607367|ref|NP_214740.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15839606|ref|NP_334643.1| hypothetical protein MT0236 [Mycobacterium tuberculosis CDC1551] gi|31791403|ref|NP_853896.1| transmembrane protein [Mycobacterium bovis AF2122/97] 58 more sequence titles Length=576 Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/576 (99%), Positives = 576/576 (100%), Gaps = 0/576 (0%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA Sbjct 1 MRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL Sbjct 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV Sbjct 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP Sbjct 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA Sbjct 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW Sbjct 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 Query 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM Sbjct 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA Sbjct 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 Query 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH 540 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH Sbjct 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH 540 Query 541 WAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 WAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD Sbjct 541 WAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 >gi|289747995|ref|ZP_06507373.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289760330|ref|ZP_06519708.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|294994700|ref|ZP_06800391.1| hypothetical protein Mtub2_09357 [Mycobacterium tuberculosis 210] gi|289688523|gb|EFD56011.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289715894|gb|EFD79906.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|326905980|gb|EGE52913.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|339296936|gb|AEJ49046.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=576 Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/576 (99%), Positives = 575/576 (99%), Gaps = 0/576 (0%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA Sbjct 1 MRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL Sbjct 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV Sbjct 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP Sbjct 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA Sbjct 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW Sbjct 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 Query 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 LRPATAAVVCCLALVLTL DLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM Sbjct 361 LRPATAAVVCCLALVLTLADLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA Sbjct 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 Query 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH 540 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH Sbjct 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH 540 Query 541 WAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 WAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD Sbjct 541 WAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 >gi|308231497|ref|ZP_07412653.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308380928|ref|ZP_07491528.2| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308217149|gb|EFO76548.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308360007|gb|EFP48858.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] Length=564 Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 563/564 (99%), Positives = 564/564 (100%), Gaps = 0/564 (0%) Query 13 VLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVALASHLVDGGVVV 72 +LLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVALASHLVDGGVVV Sbjct 1 MLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVALASHLVDGGVVV 60 Query 73 KALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYG 132 KALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYG Sbjct 61 KALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYG 120 Query 133 CLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPR 192 CLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPR Sbjct 121 CLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPR 180 Query 193 WQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLG 252 WQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLG Sbjct 181 WQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLG 240 Query 253 GIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVLAT 312 GIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVLAT Sbjct 241 GIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVLAT 300 Query 313 GPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCL 372 GPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCL Sbjct 301 GPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCL 360 Query 373 ALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVL 432 ALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVL Sbjct 361 ALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVL 420 Query 433 DPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESD 492 DPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESD Sbjct 421 DPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESD 480 Query 493 SAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLLVGGA 552 SAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLLVGGA Sbjct 481 SAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLLVGGA 540 Query 553 GAAGYWVRRHLHHCEDTPASRAQD 576 GAAGYWVRRHLHHCEDTPASRAQD Sbjct 541 GAAGYWVRRHLHHCEDTPASRAQD 564 >gi|308376340|ref|ZP_07438479.2| putative Tat (twin-arginine translocation) pathway signal sequence containing protein [Mycobacterium tuberculosis SUMu008] gi|308378581|ref|ZP_07668784.1| putative Tat (twin-arginine translocation) pathway signal sequence containing protein [Mycobacterium tuberculosis SUMu009] gi|308351374|gb|EFP40225.1| putative Tat (twin-arginine translocation) pathway signal sequence containing protein [Mycobacterium tuberculosis SUMu008] gi|308352102|gb|EFP40953.1| putative Tat (twin-arginine translocation) pathway signal sequence containing protein [Mycobacterium tuberculosis SUMu009] Length=506 Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/506 (99%), Positives = 506/506 (100%), Gaps = 0/506 (0%) Query 71 VVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVG 130 +VKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVG Sbjct 1 MVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVG 60 Query 131 YGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGR 190 YGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGR Sbjct 61 YGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGR 120 Query 191 PRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLAS 250 PRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLAS Sbjct 121 PRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLAS 180 Query 251 LGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVL 310 LGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVL Sbjct 181 LGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVL 240 Query 311 ATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVC 370 ATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVC Sbjct 241 ATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVC 300 Query 371 CLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAP 430 CLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAP Sbjct 301 CLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAP 360 Query 431 VLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVE 490 VLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVE Sbjct 361 VLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVE 420 Query 491 SDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLLVG 550 SDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLLVG Sbjct 421 SDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLLVG 480 Query 551 GAGAAGYWVRRHLHHCEDTPASRAQD 576 GAGAAGYWVRRHLHHCEDTPASRAQD Sbjct 481 GAGAAGYWVRRHLHHCEDTPASRAQD 506 >gi|308369337|ref|ZP_07666715.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308327911|gb|EFP16762.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] Length=455 Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/455 (99%), Positives = 455/455 (100%), Gaps = 0/455 (0%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA Sbjct 1 MRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL Sbjct 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV Sbjct 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP Sbjct 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA Sbjct 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW Sbjct 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 Query 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM Sbjct 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVT 455 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVT Sbjct 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVT 455 >gi|240168446|ref|ZP_04747105.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=561 Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/563 (80%), Positives = 481/563 (86%), Gaps = 5/563 (0%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RW RPGYAL L LL+ PLLRPGYLLLRDAVSTPRSY+SA ALGLT+APRATPQDFAVA Sbjct 1 MRWLRPGYALALALLVLLPLLRPGYLLLRDAVSTPRSYLSAGALGLTAAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHLVDGG+VVKALL+LGLW AGWGAARLV+ LPAAGAAGQFVAITLA+WNPYVAERL Sbjct 61 LASHLVDGGIVVKALLVLGLWFAGWGAARLVSVVLPAAGAAGQFVAITLAVWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLL+GYGCLPWVATAML +R G G F LAFW+ALAGLTP+GLLLAATVA+ Sbjct 121 LQGHWSLLLGYGCLPWVATAMLGLRL----GGSGFFALAFWIALAGLTPTGLLLAATVAL 176 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 CVA PG GRPRW C LG A+VGALPWLTASALGS LTS TAAN LGV+AFAPRAE Sbjct 177 TCVAAPGDGRPRWLCAATGLGFAVVGALPWLTASALGS-LTSQTAANGLGVSAFAPRAET 235 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTL SLASLGG+WNG+AVP SRTTLFAVASA VLLA+VA+GLP RR AVPLL LA Sbjct 236 GLGTLASLASLGGVWNGDAVPDSRTTLFAVASAAVLLAVVAVGLPAALRRATAVPLLVLA 295 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 AVSV+VPA LATGPGLH L VVDA PGLGVLRDGQKWVALAVPGYT+ GAG V+TL RW Sbjct 296 AVSVLVPAGLATGPGLHVLTAVVDAVPGLGVLRDGQKWVALAVPGYTVCGAGAVVTLARW 355 Query 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 RPA A +VCC+ALVL LPDLAWGVWG+V PVHYPSGWAAVAAAIN +P VAVLPAGTM Sbjct 356 WRPAVAGLVCCVALVLALPDLAWGVWGRVTPVHYPSGWAAVAAAINREPADVAVLPAGTM 415 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 RRFSWSG APVLDPLPRWVRADVLTTGDLVISGVTVPG+ HAR VQELLL G PS LA Sbjct 416 RRFSWSGPAPVLDPLPRWVRADVLTTGDLVISGVTVPGDGVHAREVQELLLRGADPSALA 475 Query 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH 540 AGVGW+VVESDSAGDMG+AARTL RL +RD ELALYRVGGQ G + A L+ATMLAH Sbjct 476 RAGVGWVVVESDSAGDMGSAARTLDRLTPTYRDTELALYRVGGQADGVAVAGLRATMLAH 535 Query 541 WAWLSMLLVGGAGAAGYWVRRHL 563 W WL +LL G AG AG WVRRHL Sbjct 536 WVWLCLLLAGAAGMAGCWVRRHL 558 >gi|183980504|ref|YP_001848795.1| transmembrane protein [Mycobacterium marinum M] gi|183173830|gb|ACC38940.1| conserved transmembrane protein [Mycobacterium marinum M] Length=599 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/580 (74%), Positives = 472/580 (82%), Gaps = 7/580 (1%) Query 3 WFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVALA 62 W+RPGYALVL LL+ P+L PGYLLLRDAVSTPRSY+S +ALGL +APRATPQDFA+ALA Sbjct 21 WWRPGYALVLALLVVGPVLGPGYLLLRDAVSTPRSYLSDSALGLMAAPRATPQDFAIALA 80 Query 63 SHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQ 122 S ++DGG++VKALL+LGLWLAGWGAA LVA ALPAAGA GQFVAITLAIWNPYVAERLLQ Sbjct 81 SQVIDGGILVKALLVLGLWLAGWGAAVLVARALPAAGAGGQFVAITLAIWNPYVAERLLQ 140 Query 123 GHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVC 182 GHWSLL+GYGCLPWVA ML +R + A G FGLAFW+ALAGLTP+GLLLAATVA+ C Sbjct 141 GHWSLLLGYGCLPWVAATMLGLRASE-ASQTGFFGLAFWIALAGLTPTGLLLAATVALTC 199 Query 183 VAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGL 242 VA PG G+PRW C AAL +ALVGALPWLTASALGSSLT+HTAAN LGV AFAPRAEPGL Sbjct 200 VAAPGGGKPRWLCATAALTAALVGALPWLTASALGSSLTTHTAANGLGVAAFAPRAEPGL 259 Query 243 GTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAV 302 GTL SLASLGGIWNG+AVP SRTTLFAVASA VLL +VA+GLPTVARRP VPLL LAAV Sbjct 260 GTLLSLASLGGIWNGDAVPGSRTTLFAVASAAVLLVVVAVGLPTVARRPALVPLLVLAAV 319 Query 303 SVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW-- 360 SV+VPA LATGPGLH L VDAAPGLGVLRDGQKWVALA+PGY +S A V TL R Sbjct 320 SVLVPAALATGPGLHILAAAVDAAPGLGVLRDGQKWVALAMPGYAVSAAAAVSTLSRCKT 379 Query 361 ----LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLP 416 L+ AA CCLALVL LPDLAWGV G+VAPVHYP GW AVA AIN P TVAVLP Sbjct 380 AATPLKSTLAASACCLALVLALPDLAWGVLGRVAPVHYPPGWTAVATAINHQPGTVAVLP 439 Query 417 AGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHP 476 GTMRRFSW+G APVLDPLPRWVR DVL++GDLVISGV VPG+ AR VQ+LLL G P Sbjct 440 IGTMRRFSWAGRAPVLDPLPRWVRPDVLSSGDLVISGVLVPGDGVRARTVQKLLLAGADP 499 Query 477 STLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKAT 536 + LA AGVGWLVVE G++G A RTL RL +RDDELALYR+GG+++G + +A Sbjct 500 AALAQAGVGWLVVEVHGGGEVGEAGRTLDRLTPTYRDDELALYRIGGRSAGVPAGDRRAM 559 Query 537 MLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 MLAHWAWLSMLL GGAG A VRRHL E++P A D Sbjct 560 MLAHWAWLSMLLAGGAGMAAGRVRRHLSGREESPTDLAAD 599 >gi|3063873|emb|CAA18553.1| putative membrane protein [Mycobacterium leprae] Length=591 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/584 (70%), Positives = 463/584 (80%), Gaps = 20/584 (3%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 + W RP YAL + LL+ PL+RPGYLLLRDAVSTPRSY+S ALGLTSAPR+TPQDFAVA Sbjct 1 MSWSRPSYALGMALLVVGPLMRPGYLLLRDAVSTPRSYLSDAALGLTSAPRSTPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 +ASHLVDGG+VVK+ L+LGLWLAGWGAARLV TALP+AG AGQFVA TLA+WNPYVAERL Sbjct 61 MASHLVDGGIVVKSALVLGLWLAGWGAARLVVTALPSAGVAGQFVASTLAVWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGA---GWFGLFGLAFWVALAGLTPSGLLLAAT 177 LQGHWSLLVGYGCLPWVA AML +R++ A G G F LA W+ALAGLTP+GL+LAAT Sbjct 121 LQGHWSLLVGYGCLPWVAEAMLMLRSSDNASRPGLLGFFALACWIALAGLTPTGLMLAAT 180 Query 178 VAVVCVAMP----GAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTA 233 VA++CVA+P G RPRW C A LGSAL ALPWLTASA+G+SLT+HT AN LGVT Sbjct 181 VALICVAVPVEGPGEPRPRWLCAAATLGSALGAALPWLTASAVGTSLTAHTVANTLGVTV 240 Query 234 FAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVA 293 FAPRAEPGLGTL SLASLGGIWNGEAVP+SRTTLFAV SA VLL +V GLP RRP Sbjct 241 FAPRAEPGLGTLASLASLGGIWNGEAVPTSRTTLFAVLSATVLLGVVVAGLPVAVRRPAV 300 Query 294 VPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGT 353 VPLL LAAV+V PA LATGPG+ L+ VV+A PGLGVLRDGQKWVALAVPGY+L+GAG Sbjct 301 VPLLVLAAVAVATPAALATGPGIDMLKAVVNAVPGLGVLRDGQKWVALAVPGYSLAGAGA 360 Query 354 VLTLRRWLRPA------TAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAIN- 406 V+TL RWLRP+ A+ CCLAL+L LPDLAWGVWGKV PVHYPSGWAAVAA IN Sbjct 361 VVTLGRWLRPSRPLSPVVTALACCLALILALPDLAWGVWGKVQPVHYPSGWAAVAATIND 420 Query 407 --ADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHAR 464 P VAVLPAGTMRRFSWSG+APVLDPLPRWVR DVLTTGDL+ISGV V GE HAR Sbjct 421 RGEGPGWVAVLPAGTMRRFSWSGTAPVLDPLPRWVRDDVLTTGDLIISGVMVAGEGNHAR 480 Query 465 AVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQ 524 A Q+LLL+GP+PS L AAGV WLVVESD+AGDMGA+ARTL L +RDD + LYR+GG Sbjct 481 AAQDLLLSGPNPSALTAAGVAWLVVESDTAGDMGASARTLAALQPTYRDDAIGLYRIGGS 540 Query 525 TSGASSARLKATML-AHWAWLSMLLVGGAGAAGYWVRRHLHHCE 567 + + + + ++ AH WL +L++ G + RH H + Sbjct 541 NAKTAPSPYRGLLIAAHLTWLVILVM---AVVGMQITRHTHFRD 581 >gi|15828388|ref|NP_302651.1| hypothetical protein ML2582 [Mycobacterium leprae TN] gi|221230865|ref|YP_002504281.1| hypothetical protein MLBr_02582 [Mycobacterium leprae Br4923] gi|13093818|emb|CAC32114.1| conserved membrane protein [Mycobacterium leprae] gi|219933972|emb|CAR72682.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=600 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/584 (70%), Positives = 463/584 (80%), Gaps = 20/584 (3%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 + W RP YAL + LL+ PL+RPGYLLLRDAVSTPRSY+S ALGLTSAPR+TPQDFAVA Sbjct 10 MSWSRPSYALGMALLVVGPLMRPGYLLLRDAVSTPRSYLSDAALGLTSAPRSTPQDFAVA 69 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 +ASHLVDGG+VVK+ L+LGLWLAGWGAARLV TALP+AG AGQFVA TLA+WNPYVAERL Sbjct 70 MASHLVDGGIVVKSALVLGLWLAGWGAARLVVTALPSAGVAGQFVASTLAVWNPYVAERL 129 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGA---GWFGLFGLAFWVALAGLTPSGLLLAAT 177 LQGHWSLLVGYGCLPWVA AML +R++ A G G F LA W+ALAGLTP+GL+LAAT Sbjct 130 LQGHWSLLVGYGCLPWVAEAMLMLRSSDNASRPGLLGFFALACWIALAGLTPTGLMLAAT 189 Query 178 VAVVCVAMP----GAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTA 233 VA++CVA+P G RPRW C A LGSAL ALPWLTASA+G+SLT+HT AN LGVT Sbjct 190 VALICVAVPVEGPGEPRPRWLCAAATLGSALGAALPWLTASAVGTSLTAHTVANTLGVTV 249 Query 234 FAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVA 293 FAPRAEPGLGTL SLASLGGIWNGEAVP+SRTTLFAV SA VLL +V GLP RRP Sbjct 250 FAPRAEPGLGTLASLASLGGIWNGEAVPTSRTTLFAVLSATVLLGVVVAGLPVAVRRPAV 309 Query 294 VPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGT 353 VPLL LAAV+V PA LATGPG+ L+ VV+A PGLGVLRDGQKWVALAVPGY+L+GAG Sbjct 310 VPLLVLAAVAVATPAALATGPGIDMLKAVVNAVPGLGVLRDGQKWVALAVPGYSLAGAGA 369 Query 354 VLTLRRWLRPA------TAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAIN- 406 V+TL RWLRP+ A+ CCLAL+L LPDLAWGVWGKV PVHYPSGWAAVAA IN Sbjct 370 VVTLGRWLRPSRPLSPVVTALACCLALILALPDLAWGVWGKVQPVHYPSGWAAVAATIND 429 Query 407 --ADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHAR 464 P VAVLPAGTMRRFSWSG+APVLDPLPRWVR DVLTTGDL+ISGV V GE HAR Sbjct 430 RGEGPGWVAVLPAGTMRRFSWSGTAPVLDPLPRWVRDDVLTTGDLIISGVMVAGEGNHAR 489 Query 465 AVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQ 524 A Q+LLL+GP+PS L AAGV WLVVESD+AGDMGA+ARTL L +RDD + LYR+GG Sbjct 490 AAQDLLLSGPNPSALTAAGVAWLVVESDTAGDMGASARTLAALQPTYRDDAIGLYRIGGS 549 Query 525 TSGASSARLKATML-AHWAWLSMLLVGGAGAAGYWVRRHLHHCE 567 + + + + ++ AH WL +L++ G + RH H + Sbjct 550 NAKTAPSPYRGLLIAAHLTWLVILVM---AVVGMQITRHTHFRD 590 >gi|118616847|ref|YP_905179.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118568957|gb|ABL03708.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=595 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/580 (74%), Positives = 467/580 (81%), Gaps = 7/580 (1%) Query 3 WFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVALA 62 W+RP YALVL LL+ P+L PGYLLLRDAVSTPRSY+S +ALGL +APRATPQDFA+ALA Sbjct 17 WWRPRYALVLALLVVGPVLGPGYLLLRDAVSTPRSYLSDSALGLMAAPRATPQDFAIALA 76 Query 63 SHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQ 122 S ++DGG++VKALL+LGLWLAGWGAA LVA ALPAA A GQFVAITLAIWNPYVAERLLQ Sbjct 77 SQVIDGGILVKALLVLGLWLAGWGAAVLVARALPAADAGGQFVAITLAIWNPYVAERLLQ 136 Query 123 GHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVC 182 GHWSLL+GYGCLPWVA ML +R A G FGLAFW+ALAGLTP+GLLLAATVA+ C Sbjct 137 GHWSLLLGYGCLPWVAATMLGLRAPE-ASQTGFFGLAFWIALAGLTPTGLLLAATVALTC 195 Query 183 VAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGL 242 VA PG G+PRW C AAL +ALVGALPWLTASALGSSLT+HTAAN LGV AFAPRAEPGL Sbjct 196 VAAPGGGKPRWLCATAALAAALVGALPWLTASALGSSLTTHTAANGLGVAAFAPRAEPGL 255 Query 243 GTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAV 302 GTL SLASLGGIWNG+AVP SRTTLFAVASA VLL +VA+GLPTVARRP VPLL LAAV Sbjct 256 GTLLSLASLGGIWNGDAVPGSRTTLFAVASAAVLLVVVAVGLPTVARRPALVPLLVLAAV 315 Query 303 SVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW-- 360 SV+VPA LATGPGLH L VDAAPGLGVLRDGQKWVALA+PGY +S A V TL R Sbjct 316 SVLVPAALATGPGLHILAAAVDAAPGLGVLRDGQKWVALAMPGYAVSAAAAVSTLSRCKT 375 Query 361 ----LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLP 416 L+ AA CCLALVL LPDLAWGV G+ APVHYP GW AVA AIN P TVAVLP Sbjct 376 AATPLKSTLAASACCLALVLALPDLAWGVLGRAAPVHYPPGWTAVATAINHQPGTVAVLP 435 Query 417 AGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHP 476 GTMRRFSWSG APVLDPLPRWVR DVL++GDLVISGV VPG+ AR VQ+LLL G P Sbjct 436 IGTMRRFSWSGRAPVLDPLPRWVRPDVLSSGDLVISGVLVPGDGVRARTVQKLLLAGADP 495 Query 477 STLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKAT 536 LA AGVGWLVVE G++G A RTL RL +RDDELALYR+GG+++G + +A Sbjct 496 EALAQAGVGWLVVEVHGGGEVGEAGRTLDRLTPTYRDDELALYRIGGRSAGVPAGDRRAM 555 Query 537 MLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 MLAHWAWLSMLL GGAG A VRRHL E++P A D Sbjct 556 MLAHWAWLSMLLAGGAGMAAGLVRRHLSGREESPTDLAAD 595 >gi|289441602|ref|ZP_06431346.1| transmembrane protein [Mycobacterium tuberculosis T46] gi|289414521|gb|EFD11761.1| transmembrane protein [Mycobacterium tuberculosis T46] Length=447 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/388 (99%), Positives = 388/388 (100%), Gaps = 0/388 (0%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA Sbjct 1 MRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL Sbjct 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV Sbjct 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP Sbjct 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA Sbjct 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW Sbjct 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 Query 361 LRPATAAVVCCLALVLTLPDLAWGVWGK 388 LRPATAAVVCCLALVLTLPDLAWGVWG+ Sbjct 361 LRPATAAVVCCLALVLTLPDLAWGVWGQ 388 >gi|342859310|ref|ZP_08715964.1| hypothetical protein MCOL_10538 [Mycobacterium colombiense CECT 3035] gi|342133551|gb|EGT86754.1| hypothetical protein MCOL_10538 [Mycobacterium colombiense CECT 3035] Length=575 Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/553 (78%), Positives = 465/553 (85%), Gaps = 7/553 (1%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RW RPGYALVL LL+ PLL PGYLLLRDAVSTPRSY+S ALGLTSAPRATPQDFAVA Sbjct 1 MRWTRPGYALVLALLVVGPLLAPGYLLLRDAVSTPRSYLSDTALGLTSAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LAS LVDGGVVVK LL+LGLWLAGWGAARLVA ALP AGA GQFVA T+AIWNPYVAERL Sbjct 61 LASRLVDGGVVVKTLLVLGLWLAGWGAARLVAVALPRAGAPGQFVATTVAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVA AMLT+RTT A FG GLAFW+ALAGLTP+GLLLAATVA+ Sbjct 121 LQGHWSLLVGYGCLPWVAAAMLTLRTT-DASRFGFAGLAFWIALAGLTPTGLLLAATVAL 179 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 VCV PG G R C AA G+ALV ALPWLTASA+GSSLT+HTAAN+LGV AFAPRAEP Sbjct 180 VCVVAPGGGTARGWCAAAASGAALVAALPWLTASAMGSSLTAHTAANRLGVEAFAPRAEP 239 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTLGSLA LGGIWNG+AVP SRTTLFAV SAVVLL +VA+GLPT ARRP AVPLL LA Sbjct 240 GLGTLGSLAGLGGIWNGDAVPGSRTTLFAVCSAVVLLGVVAVGLPTAARRPGAVPLLVLA 299 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 AVSV+VPA LATGPGL L VVD PG G+LRDGQKWVALA+PGY L+GAG +TLRRW Sbjct 300 AVSVLVPAALATGPGLQLLSTVVDTVPGFGLLRDGQKWVALAMPGYALAGAGAAVTLRRW 359 Query 361 LR---PATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINA---DPRTVAV 414 LR A A VCCL L+L LPDLAWGV+GKVAPV YP GW AVAAAIN DP ++AV Sbjct 360 LRLSGTAVPAFVCCLVLLLALPDLAWGVFGKVAPVRYPRGWTAVAAAINEPGGDPGSIAV 419 Query 415 LPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGP 474 LPAGTMR FSWSG PVLDPLPRWVRADVL+TGDLVISG T+ GE AHARAVQELLL+GP Sbjct 420 LPAGTMRLFSWSGPVPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGP 479 Query 475 HPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLK 534 P+ LAAAGVGWLVVESDSAGDMGAAARTL LA +RD E+ALYR+GG T G +S R Sbjct 480 DPAALAAAGVGWLVVESDSAGDMGAAARTLSALAPVYRDHEIALYRIGGHTGGVASWRRA 539 Query 535 ATMLAHWAWLSML 547 AT +AH AWL+ML Sbjct 540 ATTVAHLAWLAML 552 >gi|296167456|ref|ZP_06849855.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897204|gb|EFG76811.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=570 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/562 (76%), Positives = 468/562 (84%), Gaps = 4/562 (0%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RW RPGYALVL LL+ PLL PGYLLLRDAVSTPRSY+S ALGLTSA RATPQDF +A Sbjct 1 MRWTRPGYALVLALLVVGPLLGPGYLLLRDAVSTPRSYLSDTALGLTSAARATPQDFVLA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASH++DGGVVVKALL+LGLWLAGWGAARLVATALP AGAAGQFVAITLAIWNPYVAERL Sbjct 61 LASHVLDGGVVVKALLVLGLWLAGWGAARLVATALPDAGAAGQFVAITLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAML +R G+G F FGLAFW+ALAGLTP+GLLLAA V + Sbjct 121 LQGHWSLLVGYGCLPWVATAMLRLRA--GSGSF--FGLAFWIALAGLTPTGLLLAAAVGL 176 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 VCV GAGR R C LG AL ALPWLTASALG+SL SHTAAN LGV AFAPRAEP Sbjct 177 VCVPACGAGRSRSLCAAVTLGVALTAALPWLTASALGASLPSHTAANALGVAAFAPRAEP 236 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTLGSLA LGGIWN EAVP SRTT+FAVASAVVLL +VA GLPT RRP A PLL LA Sbjct 237 GLGTLGSLAGLGGIWNVEAVPISRTTMFAVASAVVLLGVVAAGLPTALRRPAARPLLALA 296 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 AV+V+VPA LATGPGLH L +VDAAPG GVLRDGQKWVALAVPGY L+GAG+V+TLRRW Sbjct 297 AVAVLVPAALATGPGLHLLGALVDAAPGFGVLRDGQKWVALAVPGYALAGAGSVVTLRRW 356 Query 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 L PA A VCCLAL+ LPDLAWG WG+V+PV YP GWAAVAAAINA P VA LPAGTM Sbjct 357 LWPAVTAPVCCLALIFALPDLAWGAWGQVSPVQYPRGWAAVAAAINARPAAVAALPAGTM 416 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 R ++W+G APVLDPLPRWVRADVL+TGDLVISG +PGE HARAVQ+LLL+GP PS LA Sbjct 417 RLYTWAGRAPVLDPLPRWVRADVLSTGDLVISGTVIPGEGNHARAVQQLLLSGPDPSALA 476 Query 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH 540 AGVGWLVVESD+AGDMGA+ARTL L +RD +LALYR+GG T+ + AT+LAH Sbjct 477 TAGVGWLVVESDTAGDMGASARTLDALTPVYRDGDLALYRLGGDTARVPAGTRMATLLAH 536 Query 541 WAWLSMLLVGGAGAAGYWVRRH 562 AWL+ L+VGGAGA +RR Sbjct 537 LAWLATLIVGGAGALIGRLRRD 558 >gi|118466442|ref|YP_884064.1| hypothetical protein MAV_4944 [Mycobacterium avium 104] gi|118167729|gb|ABK68626.1| conserved hypothetical protein [Mycobacterium avium 104] Length=565 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/569 (75%), Positives = 470/569 (83%), Gaps = 6/569 (1%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RW RPGYALVL LL+ PLLRPGYLLLRDAVSTPRSY+S ALGLT+APRA PQDFAVA Sbjct 1 MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAVPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHL+DGGVVVK LLLLGLWLAGWGAARLVA LP AG G+FVA TLAIWNPYVAERL Sbjct 61 LASHLLDGGVVVKTLLLLGLWLAGWGAARLVALVLPGAGMPGEFVATTLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAML +RT G G FGLAF++ALAGLTP+GLLLAA VA+ Sbjct 121 LQGHWSLLVGYGCLPWVATAMLGLRT----GGAGFFGLAFFIALAGLTPTGLLLAAAVAL 176 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 CV + GAGR RW AA+G+A V ALPWL A+ G++L SHT AN+LGV AFAPRAEP Sbjct 177 ACVPVAGAGRRRWVWAAAAIGAAAVAALPWLVAAVTGAALPSHTPANRLGVEAFAPRAEP 236 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTL SLASLGGIWN +AVP SRTTLFAVASAVVLL +VA+GLP VARRP AVPLL LA Sbjct 237 GLGTLTSLASLGGIWNADAVPGSRTTLFAVASAVVLLGVVAVGLPAVARRPAAVPLLVLA 296 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 A +V++PA LATGPGL L VVDAAPG+GVLRDGQKWVALAVPGY L+GAG VLTLRR Sbjct 297 AAAVLIPAGLATGPGLRLLGAVVDAAPGVGVLRDGQKWVALAVPGYALAGAGAVLTLRRR 356 Query 361 LRPATA-AVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGT 419 L A A A+VCCLAL+L LPDL WGV G+V+PV YP GW AVAAAINA P VAVLPAGT Sbjct 357 LFGAAAPALVCCLALILALPDLVWGVGGRVSPVRYPRGWPAVAAAINARPDAVAVLPAGT 416 Query 420 MRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTL 479 MR FSWSG APVLDPLPRWVRADVL+TGDLVISG T+ GE AHARAVQELLL+GP P+ L Sbjct 417 MRLFSWSGPAPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGPDPAAL 476 Query 480 AAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLA 539 AAAGVGWLV+E+DSAG++GAAA TLG A +RDDE+ALYR+GG T+G ++ R AT++A Sbjct 477 AAAGVGWLVLEADSAGEVGAAAHTLGAAAPVYRDDEIALYRIGGHTAGVAADRRAATLIA 536 Query 540 HWAWLSMLLVGGAGA-AGYWVRRHLHHCE 567 H AWL +LL GAG G W RR + Sbjct 537 HLAWLVLLLGSGAGVLLGAWWRRGVSRAR 565 >gi|41409763|ref|NP_962599.1| hypothetical protein MAP3665c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398595|gb|AAS06215.1| hypothetical protein MAP_3665c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460028|gb|EGO38937.1| hypothetical protein MAPs_44100 [Mycobacterium avium subsp. paratuberculosis S397] Length=565 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/569 (75%), Positives = 469/569 (83%), Gaps = 6/569 (1%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RW RPGYALVL LL+ PLLRPGYLLLRDAVSTPRSY+S ALGLT+APRA PQDFAVA Sbjct 1 MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAAPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHLVDGGVVVK LLLLGLWLAGWGAARLVA LP AG G+FVA TLAIWNPYVAERL Sbjct 61 LASHLVDGGVVVKTLLLLGLWLAGWGAARLVALVLPDAGMPGEFVATTLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAML +RT G G FGLAF++ALAGLTP+GLLLAA VA+ Sbjct 121 LQGHWSLLVGYGCLPWVATAMLGLRT----GGAGFFGLAFFIALAGLTPTGLLLAAAVAL 176 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 CV + GAGR RW C AA+G+A ALPWL A+ G++L SHT AN+LGV AFAPRAEP Sbjct 177 ACVPVAGAGRRRWVCAAAAIGAAAAAALPWLVAAVTGAALPSHTPANRLGVEAFAPRAEP 236 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTL SLASLGGIWN +AVP SRTTLFAVASAVVLL +VA+GLP VARRP AVPLL LA Sbjct 237 GLGTLTSLASLGGIWNADAVPGSRTTLFAVASAVVLLGVVAVGLPAVARRPAAVPLLVLA 296 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 A +V++PA LAT PGL L VVDAAPG+GVLRDGQKWVALAVPGY L+GAG VLTLRR Sbjct 297 AAAVLIPAGLATAPGLRLLGAVVDAAPGVGVLRDGQKWVALAVPGYALAGAGAVLTLRRR 356 Query 361 LRPATA-AVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGT 419 L A A A+VCCLAL+L LPDL WGV GKV+PV YP GW AVAAAINA P VAVLPAGT Sbjct 357 LFGAAAPALVCCLALILALPDLVWGVGGKVSPVRYPRGWPAVAAAINARPDAVAVLPAGT 416 Query 420 MRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTL 479 MR FSWSG APVLDPLPRWVRADVL+TGDLVISG T+ GE AHARAVQELLL+GP P+ L Sbjct 417 MRLFSWSGPAPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGPDPAAL 476 Query 480 AAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLA 539 AAAGVGWLV+E+DSAG++GAAA TLG A +RDDE+ALYR+GG T+G ++ R AT++A Sbjct 477 AAAGVGWLVLEADSAGEVGAAAHTLGAAAPVYRDDEIALYRIGGHTAGVAADRRAATLIA 536 Query 540 HWAWLSMLLVGGAGA-AGYWVRRHLHHCE 567 H AWL +LL GAG G W RR + Sbjct 537 HLAWLVLLLGSGAGVLVGAWRRRGVSRAR 565 >gi|145221026|ref|YP_001131704.1| hypothetical protein Mflv_0422 [Mycobacterium gilvum PYR-GCK] gi|145213512|gb|ABP42916.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=590 Score = 563 bits (1450), Expect = 4e-158, Method: Compositional matrix adjust. Identities = 348/596 (59%), Positives = 414/596 (70%), Gaps = 38/596 (6%) Query 6 PGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLT-SAPRATPQDFAVALASH 64 P YAL L + + APLL+PGYLLLRDAVSTPRSY++ ALGLT +APRA PQDF VAL S Sbjct 3 PAYALALTVAVTAPLLQPGYLLLRDAVSTPRSYLTDAALGLTQAAPRALPQDFLVALVST 62 Query 65 LVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGH 124 +VDGGVVVKALL+LGLWLAGWGAARLVA L AG AGQ VA+T+AIWNPYVAERLLQGH Sbjct 63 VVDGGVVVKALLMLGLWLAGWGAARLVAEVL-QAGVAGQCVAVTIAIWNPYVAERLLQGH 121 Query 125 WSLLVGYGCLPWVATAMLTMRT-------------------------TVGAGWFGLFGLA 159 WSLLVGYGCLPWVA +ML++R + + G+ + Sbjct 122 WSLLVGYGCLPWVAVSMLSLRAGSPRMSMSPPAAPNLHSSRQSASRRLLECNFGGVAAVV 181 Query 160 FWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSS 219 FWVALAGLTP+GL+LAAT+A+ C PGAGRPRW C + +AL ALPWL A+ + Sbjct 182 FWVALAGLTPTGLMLAATIALTCALAPGAGRPRWWCAAVGMAAALAAALPWLVATVVAPG 241 Query 220 LTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAM 279 + A + GV AFA RAEPGLGTLG+LA LGGIWN +AVP+SRTTLFA+ S VVLLA+ Sbjct 242 WAAADAGQKAGVEAFAARAEPGLGTLGTLAGLGGIWNADAVPASRTTLFAIVSTVVLLAI 301 Query 280 VAIGLPTVARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWV 339 VA+G+P + RR V VPLL LA V+V+ PA++ATGPGL A+ V+ A PGLGVLRDGQKWV Sbjct 302 VAVGVPLLVRRRVPVPLLVLAVVAVVAPALMATGPGLLAVEAVIGAVPGLGVLRDGQKWV 361 Query 340 ALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWA 399 ALA+P Y L+GA TVLTLR + VCC AL+ TLPDLAWGV G+V PV YP GW+ Sbjct 362 ALAMPAYALAGAATVLTLRSRIPTLATGAVCCAALIATLPDLAWGVGGRVTPVDYPPGWS 421 Query 400 AVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGE 459 A AA INADP TVAVLP +MRRF+W+ APVLDPLPRW+RADVL+TGDL I+G TV GE Sbjct 422 AAAAVINADPATVAVLPVDSMRRFAWAPGAPVLDPLPRWLRADVLSTGDLTIAGTTVLGE 481 Query 460 DAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALY 519 A AR VQ++L +G LAAAGVGW+VVE G+ R L ++RD+ L +Y Sbjct 482 GARAREVQQMLASGADRDELAAAGVGWVVVE-------GSGVRL--ALPESYRDENLTVY 532 Query 520 RVGGQTSGASSARLKATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQ 575 RVGG + SSA + AH WL+ L VG G R H + R Q Sbjct 533 RVGGDSP--SSAHRGVVIAAHSVWLAALGVGFLGMLVARRRSRRAHGREQEVDRPQ 586 >gi|315442003|ref|YP_004074882.1| hypothetical protein Mspyr1_03330 [Mycobacterium sp. Spyr1] gi|315260306|gb|ADT97047.1| hypothetical protein Mspyr1_03330 [Mycobacterium sp. Spyr1] Length=585 Score = 561 bits (1445), Expect = 2e-157, Method: Compositional matrix adjust. Identities = 342/566 (61%), Positives = 406/566 (72%), Gaps = 33/566 (5%) Query 6 PGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLT-SAPRATPQDFAVALASH 64 P YAL L + + APLL+PGYLLLRDAVSTPRSY++ ALGLT +APRA PQDF VAL S Sbjct 3 PAYALALTVAVTAPLLQPGYLLLRDAVSTPRSYLTDAALGLTQAAPRALPQDFLVALVST 62 Query 65 LVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGH 124 +VDGGVVVKALL+LGLWLAGWGAARLVA L AG AGQ VA+T+AIWNPYVAERLLQGH Sbjct 63 VVDGGVVVKALLILGLWLAGWGAARLVADVL-QAGVAGQCVAVTIAIWNPYVAERLLQGH 121 Query 125 WSLLVGYGCLPWVATAMLTMRT--------------------TVGAGWFGLFGLAFWVAL 164 WSLLVGYGCLPWVA +ML++R + + G+ + FWVAL Sbjct 122 WSLLVGYGCLPWVAVSMLSLRAGSPRAAAPKLHSSRQSASRRLLECNFGGVAAVVFWVAL 181 Query 165 AGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHT 224 AGLTP+GL+LAAT+A+ C PGAGRPRW C + +AL ALPWL A+A+ + Sbjct 182 AGLTPTGLMLAATIALTCALAPGAGRPRWWCAAVGMVAALAAALPWLVATAVAPGWAAAD 241 Query 225 AANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGL 284 A + GV AFA RAEPGLGTLGSLA LGGIWN +AVP+SRTT FA+ S VLLA+VA+G+ Sbjct 242 AGQKAGVEAFAARAEPGLGTLGSLAGLGGIWNADAVPASRTTPFAIVSTAVLLAIVAVGV 301 Query 285 PTVARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVP 344 P + RR V VPLL LA V+V+ PA++ATGPGL A+ V+ A PGLGVLRDGQKWVALA+P Sbjct 302 PLLVRRRVPVPLLVLAVVAVVAPALMATGPGLLAVEAVIGAVPGLGVLRDGQKWVALAMP 361 Query 345 GYTLSGAGTVLTLRRWLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAA 404 Y L+GA TVLTLR + VCC L+ TLPDLAWGV G+V PV YP GW+A AA Sbjct 362 AYALAGAATVLTLRSRIPTLATGAVCCAVLIATLPDLAWGVGGRVTPVDYPPGWSAAAAV 421 Query 405 INADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHAR 464 INADP TVAVLP +MRRF+W+ APVLDPLPRW+RADVL+TGDL I+G TV GE A AR Sbjct 422 INADPATVAVLPVDSMRRFAWAPGAPVLDPLPRWLRADVLSTGDLTIAGTTVLGEGARAR 481 Query 465 AVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQ 524 VQ++L +G LAAAGVGW+VVE G+ R L ++RD+ L +YRVGG Sbjct 482 EVQQMLTSGADRDELAAAGVGWVVVE-------GSGVRL--ALPESYRDENLTVYRVGGH 532 Query 525 TSGASSARLKATMLAHWAWLSMLLVG 550 + SSA + AH WL+ L VG Sbjct 533 SP--SSAHRGVVIAAHSVWLAALGVG 556 >gi|339293290|gb|AEJ45401.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] Length=285 Score = 543 bits (1399), Expect = 4e-152, Method: Compositional matrix adjust. Identities = 283/285 (99%), Positives = 284/285 (99%), Gaps = 0/285 (0%) Query 292 VAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGA 351 +AVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGA Sbjct 1 MAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGA 60 Query 352 GTVLTLRRWLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRT 411 GTVLTLRRWLRPATAAVVCCLALVLTL DLAWGVWGKVAPVHYPSGWAAVAAAINADPRT Sbjct 61 GTVLTLRRWLRPATAAVVCCLALVLTLADLAWGVWGKVAPVHYPSGWAAVAAAINADPRT 120 Query 412 VAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLL 471 VAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLL Sbjct 121 VAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLL 180 Query 472 TGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSA 531 TGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSA Sbjct 181 TGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSA 240 Query 532 RLKATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 RLKATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD Sbjct 241 RLKATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 285 >gi|333988843|ref|YP_004521457.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333484811|gb|AEF34203.1| transmembrane protein [Mycobacterium sp. JDM601] Length=581 Score = 537 bits (1384), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 356/546 (66%), Positives = 413/546 (76%), Gaps = 7/546 (1%) Query 2 RWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVA 60 RW P YAL L LL+ APLLRPGYLLLRDAVSTPRSY++ +ALGL +APRA PQDFAVA Sbjct 6 RWVAPCYALGLTLLVLAPLLRPGYLLLRDAVSTPRSYLTGSALGLGEAAPRAVPQDFAVA 65 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LAS L DGG VVKALL+ LWLAG GAARLVAT LP AG GQ VA+T+AIWNPYVAERL Sbjct 66 LASRLFDGGTVVKALLIAALWLAGCGAARLVATVLPEAGRPGQLVAVTVAIWNPYVAERL 125 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVA AML +R+ G G L GL F++ALAGLTP+GLLLAA VA+ Sbjct 126 LQGHWSLLVGYGCLPWVAVAMLRLRSGGGGG---LLGLVFFLALAGLTPTGLLLAAVVAL 182 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEP 240 VCVA PG+G PRW C + + ALPWL A +G GV AFA RAEP Sbjct 183 VCVAAPGSGPPRWWCATGTVATTATAALPWLMALVVGPG---SVRGEPAGVAAFAARAEP 239 Query 241 GLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA 300 GLGTLGSLA L GIWN EAVP SRTT+FA+ + VLL +VA+G+PTV R A PLL LA Sbjct 240 GLGTLGSLAGLAGIWNAEAVPGSRTTVFALVATAVLLGVVALGVPTVRRVSAARPLLVLA 299 Query 301 AVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRW 360 +V+V A+LATGPGL AL VD APG G+LRDGQKWVALA+PGY L+ AG V+ LR Sbjct 300 GTAVLVLAMLATGPGLAALGWAVDVAPGAGLLRDGQKWVALAMPGYVLAAAGAVVGLRDR 359 Query 361 LRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 L P AA+VCC+AL++ LPDLAWGV G+++PVHYP GWAAVAA INADPR VAVLPA TM Sbjct 360 LPPPRAALVCCIALIVVLPDLAWGVGGRISPVHYPPGWAAVAAKINADPRPVAVLPADTM 419 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 R F+W+G APVLDPL RWVRA+VLTTGDL + G TVPGE AHARAVQ+ LL+G P TL Sbjct 420 RHFAWAGPAPVLDPLGRWVRAEVLTTGDLHVGGQTVPGEGAHARAVQQALLSGAEPVTLG 479 Query 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAH 540 GVGW+VVES + G+MGAAA+TL RL ++RD + +YRVGG+ + +A + AH Sbjct 480 VYGVGWVVVESGTDGEMGAAAKTLSRLPVSYRDSDFTVYRVGGRAPKGPAGARRAVVAAH 539 Query 541 WAWLSM 546 WL+M Sbjct 540 LGWLAM 545 >gi|120401275|ref|YP_951104.1| hypothetical protein Mvan_0249 [Mycobacterium vanbaalenii PYR-1] gi|119954093|gb|ABM11098.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=567 Score = 536 bits (1382), Expect = 3e-150, Method: Compositional matrix adjust. Identities = 342/568 (61%), Positives = 407/568 (72%), Gaps = 22/568 (3%) Query 12 LVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSA-PRATPQDFAVALASHLVDGGV 70 + L + APLL PG+LLLRDAVSTPRSY++ ALGLT A PRA PQDFAVALAS +VDGGV Sbjct 1 MTLGVTAPLLAPGHLLLRDAVSTPRSYLTDGALGLTQAAPRALPQDFAVALASTVVDGGV 60 Query 71 VVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVG 130 VVKALL+LGLWLAGWGAARLVAT LP AG AGQ VA+T+AIWNPYVAERLLQGHWSLLVG Sbjct 61 VVKALLMLGLWLAGWGAARLVATVLPDAGTAGQCVAVTIAIWNPYVAERLLQGHWSLLVG 120 Query 131 YGCLPWVATAML-TMRTTVGAG-------WFGLFG-LAFWVALAGLTPSGLLLAATVAVV 181 YGCLPWVA + ++ G+ FG G L FW+ALAGLTP+GL+LAAT+A+ Sbjct 121 YGCLPWVALCFAPKLHSSSGSASGPLLECNFGRVGALLFWIALAGLTPTGLMLAATIALA 180 Query 182 CVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPG 241 C AGR RW+C +L ++++ ALPWL ASA+ + A Q GV AFA RAEPG Sbjct 181 CSM--AAGRSRWRCAGLSLAASMIAALPWLVASAV-GGGWAAAADQQPGVAAFAARAEPG 237 Query 242 LGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAA 301 L TLGSLASLGGIWN EAVP+SRTTLFA+ASA VLLA+VA G+P + RR A+PLL +AA Sbjct 238 LATLGSLASLGGIWNAEAVPASRTTLFALASAGVLLAIVAAGVPLLIRRRTALPLLVVAA 297 Query 302 VSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWL 361 +V++P ++ATGPGL A+ V+ A PGLGV+RDGQKWVALA+P Y L+GA V+ LR + Sbjct 298 AAVVIPTLMATGPGLAAVDAVIGAVPGLGVIRDGQKWVALAMPAYALAGAAAVIALRPRV 357 Query 362 RPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMR 421 A A V ALV TLPDLAWGV G+V PV YP+GW+A AA INADP VAVLP +MR Sbjct 358 PAAATAAVFAAALVATLPDLAWGVGGRVNPVQYPAGWSAAAAVINADPAPVAVLPVDSMR 417 Query 422 RFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAA 481 FSW+G PVLDPLPRWVRADVL+TGDL I+G TVPGE AR VQ++L++G LAA Sbjct 418 HFSWAGEVPVLDPLPRWVRADVLSTGDLTIAGRTVPGEGTRAREVQQMLISGADADQLAA 477 Query 482 AGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHW 541 AGVGW+VVE + G RL A+RDD+L +Y VGG +G S + AH Sbjct 478 AGVGWVVVEGTADGTPEL------RLPVAYRDDDLTVYAVGGDAAG--SPHRTVLLAAHT 529 Query 542 AWLSMLLVG-GAGAAGYWVRRHLHHCED 568 WL+ L G A G RH H + Sbjct 530 VWLAALGAGLIAMLVGLLRSRHAHRRQQ 557 >gi|118473197|ref|YP_884730.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118174484|gb|ABK75380.1| probable conserved transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=545 Score = 511 bits (1315), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 317/490 (65%), Positives = 367/490 (75%), Gaps = 7/490 (1%) Query 6 PGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSA-PRATPQDFAVALASH 64 P YALVL +L+ APLL PGYLLLRDAVSTPRSYV+ ALGLT A PRA PQDFAVALAS Sbjct 2 PAYALVLSVLVTAPLLAPGYLLLRDAVSTPRSYVTDAALGLTEAAPRALPQDFAVALASS 61 Query 65 LVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGH 124 ++DGGVVVKALLL GL AGWGAARLV L AG AG+F A TLAIWNPYVAERLLQGH Sbjct 62 VLDGGVVVKALLLAGLAAAGWGAARLVGHVLFDAGLAGRFTAATLAIWNPYVAERLLQGH 121 Query 125 WSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVA 184 WSLLVGYGCLPWVA ++L +R A W + L FW+ALAGLTP+GL+LAATVA+VCVA Sbjct 122 WSLLVGYGCLPWVAVSVLRLRER--ASWTPVAPLVFWMALAGLTPTGLVLAATVALVCVA 179 Query 185 MPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGT 244 PG G R + LG A+ A PWL A+ + +++S GV AFA RAEPGL T Sbjct 180 APGDGWRRARVAGLGLGVAVAAACPWLVAAFVSGAVSSSPDPGA-GVRAFAARAEPGLAT 238 Query 245 LGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSV 304 LGSLA LGGIWNG+AVP+SRT+LFAV + VVLL +VA GLP VARR AVPLL LAA +V Sbjct 239 LGSLAGLGGIWNGDAVPASRTSLFAVVATVVLLGVVAAGLPVVARRRAAVPLLVLAAGAV 298 Query 305 MVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRP- 363 ++PA++A+ PGL + ++DA PGLG++RDGQKWVALA+PGY L+ + LRR P Sbjct 299 IMPALMASAPGLVVVEALIDAVPGLGIVRDGQKWVALAMPGYALAAGAAPMMLRRLRIPA 358 Query 364 ATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRF 423 A AA VCC AL+ LPDL WGV ++ V YP WA VAA INADPR V LPA ++R F Sbjct 359 AAAAAVCCAALIAVLPDLTWGVGNQMRAVRYPQSWAQVAATINADPRPVVALPADSIREF 418 Query 424 SWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAG 483 SW+G+ VLDPLPRW+RADVLTTGDL+I G TVPGE A ARAVQ LL G P LA AG Sbjct 419 SWAGT--VLDPLPRWLRADVLTTGDLLIGGRTVPGEGARARAVQGLLRDGASPQQLAEAG 476 Query 484 VGWLVVESDS 493 VGWLV E+DS Sbjct 477 VGWLVRETDS 486 >gi|108797200|ref|YP_637397.1| hypothetical protein Mmcs_0220 [Mycobacterium sp. MCS] gi|119866285|ref|YP_936237.1| hypothetical protein Mkms_0230 [Mycobacterium sp. KMS] gi|108767619|gb|ABG06341.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692374|gb|ABL89447.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=531 Score = 491 bits (1264), Expect = 2e-136, Method: Compositional matrix adjust. Identities = 333/521 (64%), Positives = 390/521 (75%), Gaps = 20/521 (3%) Query 29 RDAVSTPRSYVSANALGLTSA-PRATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWGA 87 RDAVSTPRSY++ ALGL+ A PRA PQDFA+ALAS ++DGGVVVK LL+ GLW AGWGA Sbjct 14 RDAVSTPRSYLTDAALGLSEAAPRALPQDFAIALASQVLDGGVVVKVLLVAGLWAAGWGA 73 Query 88 ARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLTMRTT 147 ARL +T +P AGAAGQ VA+T+A+WNPYVAERLLQGHWSLLVGYGCLPWVATA+L +R Sbjct 74 ARLASTVVPDAGAAGQCVAVTVAVWNPYVAERLLQGHWSLLVGYGCLPWVATAVLRLRDG 133 Query 148 VGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGA 207 G W L FW+ALAGLTP+GLLLAA VAVV V PGAGR R AALG+A+V A Sbjct 134 SGPWW----PLPFWIALAGLTPTGLLLAAVVAVVSVCAPGAGRRRIAVLGAALGAAVVSA 189 Query 208 LPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTL 267 +PWL A+A+ SL AA G+ AFA RAEPGLGTLGSLA LGGIWN +AVP SRTTL Sbjct 190 MPWLVAAAVSGSLAVSPAA---GLPAFAARAEPGLGTLGSLAGLGGIWNADAVPGSRTTL 246 Query 268 FAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAP 327 FAV + +LLA+V G+ V RRP A PLL LAA +V+ PAV+ATGPGL L V A P Sbjct 247 FAVVATAMLLAVVLAGVWVVRRRPAARPLLILAAAAVLFPAVMATGPGLAVLEHTVRALP 306 Query 328 GLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALVLTLPDLAWGVWG 387 GLGVLRDGQKWVALAVPGY ++GAG VL +RR + PA VCC AL+ LPDLA+GV G Sbjct 307 GLGVLRDGQKWVALAVPGYAVAGAGAVLAVRR-VSPAALGAVCCAALIAVLPDLAFGVGG 365 Query 388 KVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTG 447 ++ V YP GWAA AA INADPR VAVLP +MR+F+W+G APVLDPLPRWVRA+VL+TG Sbjct 366 QMRAVQYPPGWAAAAAVINADPRPVAVLPPDSMRQFAWAGEAPVLDPLPRWVRAEVLSTG 425 Query 448 DLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRL 507 DLVI G TVPGE ARAVQ+L++ G S LA AGVGW+VVES SA L Sbjct 426 DLVIGGTTVPGEGVRARAVQDLVMRGAPVSELADAGVGWVVVESGSAAL---------DL 476 Query 508 AAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLL 548 A+RDD+LA+YRVGG G++ L + AH AWL++L+ Sbjct 477 PVAYRDDDLAVYRVGGDRPGSADRWL--LIGAHVAWLAVLV 515 >gi|126432823|ref|YP_001068514.1| hypothetical protein Mjls_0210 [Mycobacterium sp. JLS] gi|126232623|gb|ABN96023.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=531 Score = 471 bits (1212), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 333/521 (64%), Positives = 386/521 (75%), Gaps = 20/521 (3%) Query 29 RDAVSTPRSYVSANALGLTSA-PRATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWGA 87 RDAVSTPRSY++ ALGL+ A PRA PQDFA+ALASH++DGGVVVK LL+ GLW AGWGA Sbjct 14 RDAVSTPRSYLTDAALGLSEAAPRALPQDFAIALASHVLDGGVVVKVLLVAGLWAAGWGA 73 Query 88 ARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLTMRTT 147 ARL +T +P AG AGQ VA+T+A+WNPYVAERLLQGHWSLLVGYGCLPWVA A+L +R Sbjct 74 ARLASTVVPDAGVAGQCVAVTVAVWNPYVAERLLQGHWSLLVGYGCLPWVAAAVLRLRDG 133 Query 148 VGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGA 207 G W L FW+A+AGLTP+GLLLAA VAVV V PGAGR R AALG+A+V A Sbjct 134 SGPWW----PLPFWIAVAGLTPTGLLLAAVVAVVSVCAPGAGRRRIAVLGAALGAAVVSA 189 Query 208 LPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTL 267 LPWL A+A+ SL AA G+ AFA RAEPGLGTLGSLA LGGIWN +AVP SRTTL Sbjct 190 LPWLVAAAVSGSLAVSPAA---GLPAFAARAEPGLGTLGSLAGLGGIWNADAVPGSRTTL 246 Query 268 FAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAP 327 FAV + VVLLA+V G V RP A PLL LAA +V+ PAV+ATGPGL L V A P Sbjct 247 FAVVATVVLLAVVLAGAWVVRHRPAARPLLILAAAAVLFPAVMATGPGLAVLEHTVRALP 306 Query 328 GLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALVLTLPDLAWGVWG 387 GLGVLRDGQKWVALAVPGY ++GAG VL +RR + PA VCC AL+ LPDLA+GV G Sbjct 307 GLGVLRDGQKWVALAVPGYAVAGAGAVLAVRR-VSPAALGAVCCAALIAVLPDLAFGVGG 365 Query 388 KVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTG 447 ++ V YP GWAA AA INADPR VAVLP +MR+F+W+G APVLDPLPRWVRA+VL+TG Sbjct 366 QMRAVQYPPGWAAAAAVINADPRPVAVLPPDSMRQFAWAGEAPVLDPLPRWVRAEVLSTG 425 Query 448 DLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRL 507 DLVI G TVPGE ARAVQ+L++ G S LA AGVGW+VVES SA L Sbjct 426 DLVIGGTTVPGEGVRARAVQDLVMRGAPVSELADAGVGWVVVESGSAAL---------DL 476 Query 508 AAAHRDDELALYRVGGQTSGASSARLKATMLAHWAWLSMLL 548 A+RDD+LA+YRVGG SA + AH AWL++L+ Sbjct 477 PVAYRDDDLAVYRVGGDRP--RSADRGLLIGAHVAWLAVLV 515 >gi|169631549|ref|YP_001705198.1| hypothetical protein MAB_4475 [Mycobacterium abscessus ATCC 19977] gi|169243516|emb|CAM64544.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=575 Score = 456 bits (1173), Expect = 5e-126, Method: Compositional matrix adjust. Identities = 294/547 (54%), Positives = 378/547 (70%), Gaps = 19/547 (3%) Query 24 GYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVALASHLVDGGVVVKALLLLGLWL 82 GYLL+RDAVSTPRSYV+ ALG+ +APRA PQDF +A+ + LVDGGV+VK LL LGLWL Sbjct 27 GYLLIRDAVSTPRSYVTDTALGVGEAAPRAVPQDFFIAVMTVLVDGGVLVKMLLALGLWL 86 Query 83 AGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAML 142 AGWGAARL A +PAAG G+ VA T+AIWNPYVAERLLQGHWSLLVGYGCLPW+A ++ Sbjct 87 AGWGAARLAAQLVPAAGIPGELVAATIAIWNPYVAERLLQGHWSLLVGYGCLPWIALTVI 146 Query 143 TMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGS 202 +RT G + LAFW+A+AGLTP+G +LA + V + A R + GV A+ Sbjct 147 RLRTATNLGAW--CPLAFWIAVAGLTPTGTVLA-----LIVGLAAATDRRSRVGVLAI-- 197 Query 203 ALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPS 262 +++ A+PWL AS LG+++ + AA GV AFA RAEPGLGTLGSLASLGG+WN AVP+ Sbjct 198 SVLAAMPWLVASGLGAAVPAGDAA---GVHAFAARAEPGLGTLGSLASLGGMWNASAVPA 254 Query 263 SRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVV 322 SRTTLFA+ +VVLL +VA+G + R A+ LL +A +V++PA+LATGPGL + Sbjct 255 SRTTLFALVFSVVLLIVVAVGAAVLWRARKALGLLGIAVAAVIIPALLATGPGLTLTTWL 314 Query 323 VDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALVLTLPDLA 382 + PGLG+LRDGQKWVALA+P Y ++GA V+ +R AA + C AL+ TLPDLA Sbjct 315 ITEVPGLGILRDGQKWVALAMPAYAVAGAAAVIAVRERSSQYLAAGLACAALIFTLPDLA 374 Query 383 WGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSA-PVLDPLPRWVRA 441 WGV G++ V YPSGW AVAA INADP VAVLP TMR++ W S+ PVLDP PRW+RA Sbjct 375 WGVGGRMTAVKYPSGWNAVAAHINADPHPVAVLPPETMRQYPWGPSSIPVLDPFPRWIRA 434 Query 442 DVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAA 501 D +++GDL + G V G+ R V+ELL G P LAA GVGW+VV++D+ G ++ Sbjct 435 DTVSSGDLRVDGHDVRGDGTRGRQVEELLRAGAAPRELAAHGVGWVVVQADTPGQQAVSS 494 Query 502 RTLGRLAAAHRDDELALYRVGG--QTSGASSARLKATMLAHWAWLSMLLVGGAGAAGYWV 559 +TL +L A+RD ++ALYRV G A R A + AH W+++L GG + Sbjct 495 KTLAQLDTAYRDGDIALYRVPGPWNPIAAPPGRRAAVIAAHLVWIALLAAGGVAV---FR 551 Query 560 RRHLHHC 566 R+H Sbjct 552 RQHTRQV 558 >gi|333921778|ref|YP_004495359.1| hypothetical protein AS9A_4125 [Amycolicicoccus subflavus DQS3-9A1] gi|333483999|gb|AEF42559.1| Conserved hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=585 Score = 381 bits (978), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 265/564 (47%), Positives = 338/564 (60%), Gaps = 28/564 (4%) Query 6 PGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVALASH 64 P Y+ L +L+ APLL+PGYLL RDAVSTPRSY++ +ALGL +APRA PQD+ ++ S Sbjct 12 PVYSAFLSILILAPLLQPGYLLFRDAVSTPRSYLTDSALGLGDAAPRAVPQDWLLSTLSR 71 Query 65 LVDGGVVVKALLLLGLWLAGWGAARLVATALP------AAGAAGQFVAITLAIWNPYVAE 118 +DGG++V A+L L L L GWGAA LV L AG + A+T+AIWNPYVAE Sbjct 72 FIDGGLIVVAILFLALMLGGWGAAALVRAVLTRPDYGLGAGPGAECAAVTVAIWNPYVAE 131 Query 119 RLLQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATV 178 RLLQGHWSLLVGY LPWVA A L + A W L A + A LTP+G +LA + Sbjct 132 RLLQGHWSLLVGYAALPWVAVAALRISRGDNAAWLLL---ALSIGCAALTPTGAILALVL 188 Query 179 AVVCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHT--AANQLGVTAFAP 236 A+ P GV LG A + A PWLTA+ L S T + Q G AFA Sbjct 189 ALSLTVGSLRTHPVRVVGV--LGMAAIAATPWLTAA-----LVSGTPGVSGQAGAEAFAA 241 Query 237 RAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTV--ARRPVAV 294 RAEPGL TLGSLA LGGIWN E+VP SRTT A+ + LL +VA+G + AR A Sbjct 242 RAEPGLATLGSLAGLGGIWNAESVPLSRTTPVALLATAWLLGLVALGAWQLWKARAAEAR 301 Query 295 PLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTV 354 PL +A ++V++PA+ AT G+ AL V PG G+LRD QK+VALA+P Y L A TV Sbjct 302 PLGIVAGLAVVLPALAATPAGISALAAVTAGFPGGGLLRDTQKFVALAMPFYALCVAATV 361 Query 355 LTLRRWLRPATAAVVCCLA---LVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPR- 410 + L R A V L L+ LPDLAWG G + PVHYP+GWAAVA ++ P Sbjct 362 IFLARAASTGLAVAVPALVSGMLIAVLPDLAWGAGGHLRPVHYPAGWAAVAQHVSTGPPH 421 Query 411 -TVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQEL 469 VAVLPAG R F +SG VLDP PR + DVL+ GDL++ G V GE + Q Sbjct 422 GAVAVLPAGMFRVFPFSGDVVVLDPAPRLLPRDVLSAGDLIVGGEIVRGEGERGQRAQTA 481 Query 470 LLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTS--G 527 LL G P L + G W++VE ++ G G A+ TL +L + D++L LYRV G+ + Sbjct 482 LLEGEGPGRLLSLGAAWVLVEHNTPGLHGDASDTLAQLEHVYSDNDLTLYRVPGEPADLS 541 Query 528 ASSARLKATMLAHWAWLSMLLVGG 551 A +A + AH+AWL +++ G Sbjct 542 APTAHRNTVIAAHYAWLGLIVFSG 565 >gi|226304597|ref|YP_002764555.1| hypothetical protein RER_11080 [Rhodococcus erythropolis PR4] gi|226183712|dbj|BAH31816.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=577 Score = 372 bits (954), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 267/529 (51%), Positives = 334/529 (64%), Gaps = 19/529 (3%) Query 29 RDAVSTPRSYVSANALGLTSAP-RATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWGA 87 RDAVSTPRSY++ +ALGLT A RA PQD +A S ++DGG+VVK +LL+ LWLAGWGA Sbjct 34 RDAVSTPRSYLTDSALGLTDAAARAVPQDALIAALSTVIDGGLVVKFILLVALWLAGWGA 93 Query 88 ARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLTMRTT 147 AR+VA LP AG Q VA T+ +WNPYVAERLLQGHWSLL GY LPW+ A + +R Sbjct 94 ARMVAVLLPTAGLGPQLVASTVMLWNPYVAERLLQGHWSLLTGYAALPWIVCAGIGVRRA 153 Query 148 VGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRP---RWQCGVAALGSAL 204 W+ L A +A AGLTP+G LLA T A+V VA PG GR R CG A+G L Sbjct 154 TPGSWWAL---AASLAFAGLTPTGALLALTAALVVVATPG-GRTSAMRRVCG--AIGLFL 207 Query 205 VGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSR 264 V A PWL A+ + S + ++ GV AFA RAEPGL TLGSLA LGGIWN AVPS+R Sbjct 208 VAASPWLVATFV--SGAAGDGSDPAGVAAFAARAEPGLATLGSLAGLGGIWNSAAVPSTR 265 Query 265 TTLFAVASAVVLLAMVAIGLPTVARR---PVAVPLLTLAAVSVMVPAVLATGPGLHALRV 321 TTLFA+ V+LL +V G+P + RR PV L LA +V+ P + AT GL R Sbjct 266 TTLFALVGTVLLLVVVFAGVPALWRRRRNPVVSGLGALALFAVLAPTLGATPWGLDVGRW 325 Query 322 VVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVL--TLRRWLRPATAAVVCCLALVLTLP 379 V+ G G+LRD QKWVALAVP Y L+ A V+ R L T ++ + ++ LP Sbjct 326 SVEVFTGAGLLRDAQKWVALAVPFYALAAAAAVMWAGNRFSLPRPTFSIAAVVVTIVALP 385 Query 380 DLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWV 439 DL WGV G + PVHYP W VA + + VAVLPAG R F +SG APVLDP PR++ Sbjct 386 DLVWGVGGALKPVHYPGSWTVVAEQLRDETGDVAVLPAGMFRAFPYSGDAPVLDPAPRFL 445 Query 440 RADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGA 499 DVL TG LV++G TV GE A V+++LL G P+ LA GVGW+++E ++ G +G Sbjct 446 PLDVLQTGQLVVAGGTVGGEGTRATQVEDVLLAGGSPTQLADLGVGWVLIERETPGQLGK 505 Query 500 AARTLGRLAAAHRDDELALYRVGGQTSG--ASSARLKATMLAHWAWLSM 546 AA TL L D++L LYRV G + AS+ A + AH AW+ M Sbjct 506 AAATLDGLEQVFADNDLELYRVPGDVAAQEASTGARTAVIAAHLAWILM 554 >gi|229494455|ref|ZP_04388218.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318817|gb|EEN84675.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=582 Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 269/530 (51%), Positives = 334/530 (64%), Gaps = 21/530 (3%) Query 29 RDAVSTPRSYVSANALGLTSAP-RATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWGA 87 RDAVSTPRSY++ +ALGLT A RA PQD +A S ++DGG+VVK +LL+ LWLAGWGA Sbjct 39 RDAVSTPRSYLTDSALGLTDAAARAVPQDALIAALSTVIDGGLVVKFILLVALWLAGWGA 98 Query 88 ARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAML-TMRT 146 AR+VA LP AG Q VA T+ +WNPYVAERLLQGHWSLL GY LPW+ A + R Sbjct 99 ARMVAVLLPTAGVGPQLVASTVMLWNPYVAERLLQGHWSLLTGYAALPWIVCAGIGVRRA 158 Query 147 TVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRP---RWQCGVAALGSA 203 T G+ W LAF AGLTP+G LLA T A+V VA PG GR R CG +G Sbjct 159 TPGSWWASAASLAF----AGLTPTGALLALTAALVVVATPG-GRTSAMRRVCGT--IGLF 211 Query 204 LVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSS 263 LV A PWL A+ + + + ++ GV AFA RAEPGL TLGSLA LGGIWN AVPS+ Sbjct 212 LVAASPWLVATFVSGA--AGDGSDPAGVAAFAARAEPGLATLGSLAGLGGIWNSAAVPST 269 Query 264 RTTLFAVASAVVLLAMVAIGLPTVARR---PVAVPLLTLAAVSVMVPAVLATGPGLHALR 320 RTTLFA+ V+LL +V G+P + RR PV L LA +V+ P + AT GL A R Sbjct 270 RTTLFALVGTVLLLVVVFAGMPALWRRRRNPVVSGLGLLALFAVLAPTMSATPWGLDAGR 329 Query 321 VVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVL-TLRRWLRPATA-AVVCCLALVLTL 378 V+ G G+LRD QKWVALAVP Y L+ A V+ R+ P A +V + ++ L Sbjct 330 WSVEVFTGAGLLRDAQKWVALAVPFYALAAAAAVMWAGNRFSLPRPAFSVAAVVVTIVAL 389 Query 379 PDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRW 438 PDL WGV G + PVHYP W V + + VAVLPAG R F +SG APVLDP PR+ Sbjct 390 PDLVWGVGGALKPVHYPGSWTVVTEQLRDETGDVAVLPAGMFRAFPYSGDAPVLDPAPRF 449 Query 439 VRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMG 498 + DVL TG LV++G V GE A V++LLL G P+ LA GVGW+++E + G +G Sbjct 450 LPLDVLQTGQLVVAGGAVGGEGTRATRVEDLLLAGGSPTQLADLGVGWVLIERGTPGQLG 509 Query 499 AAARTLGRLAAAHRDDELALYRVGGQ--TSGASSARLKATMLAHWAWLSM 546 +A TL L DD+LAL+RV G T AS+ A ++AH AW+ M Sbjct 510 NSATTLDGLEQVFADDDLALFRVPGDIATQEASTGARTAVVVAHLAWVLM 559 >gi|226364648|ref|YP_002782430.1| hypothetical protein ROP_52380 [Rhodococcus opacus B4] gi|226243137|dbj|BAH53485.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=573 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 270/525 (52%), Positives = 332/525 (64%), Gaps = 16/525 (3%) Query 8 YALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAP-RATPQDFAVALASHLV 66 Y+LVL ++ PLL PGYLLLRDAVSTPRSY++ +ALGLT A RA PQD +A S V Sbjct 14 YSLVLASVVLGPLLGPGYLLLRDAVSTPRSYLTDSALGLTDAAARAVPQDALLAALSVFV 73 Query 67 DGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWS 126 DGG+VVKA+LLL LW AGWGAA +V T LP AG Q VA T+ +WNPYVAERLLQGHWS Sbjct 74 DGGLVVKAILLLALWAAGWGAAHMVRTVLPTAGLGPQLVAATVTVWNPYVAERLLQGHWS 133 Query 127 LLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMP 186 LL GY LPW A + +R GWF L A AGLTP+G+LLAA A+ +A P Sbjct 134 LLTGYAALPWTVCAAVAIRRGRLRGWFALAACL---AAAGLTPTGVLLAAVTALSVLACP 190 Query 187 GAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLG 246 G RW ALG + PWL A+AL + + A AEPGL TLG Sbjct 191 GGRSSRWLRLTGALGLIFAASAPWLVATALSGGGGDGSDPAGVAAFAAR--AEPGLATLG 248 Query 247 SLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARR---PVAVPLLTLAAVS 303 SLA LGG+WN AVP +RT+LFA+ +LL +V +GLP + RR PV L LA V+ Sbjct 249 SLAGLGGVWNETAVPQTRTSLFALVGTALLLGVVVLGLPALWRRRRHPVVAALTVLALVA 308 Query 304 VMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRP 363 V++P + AT GL A R +V PG G+LRD QKWVALA P Y L+ A VL Sbjct 309 VLLPTLGATAWGLDAGRWLVQTVPGAGLLRDAQKWVALAAPLYALAAAAAVLRRP----- 363 Query 364 ATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADP--RTVAVLPAGTMR 421 AT +V L ++L LPDLAWGV G + PVHYP W VAAA+++DP VAVLP G R Sbjct 364 ATWSVSAVLVVLLALPDLAWGVGGALRPVHYPPSWQRVAAALDSDPGGGDVAVLPTGMFR 423 Query 422 RFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAA 481 +F +S SAPVLDP PR + ADVL TG+LV++G +V GE + A+ V+ +LLTG P+ LA Sbjct 424 KFPYSSSAPVLDPAPRMLPADVLQTGELVVAGGSVGGEGSRAQQVERVLLTGGSPAELAP 483 Query 482 AGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTS 526 GV W++VE D+ G G +A TL L D+ L LYRV G + Sbjct 484 LGVRWVLVERDTPGPRGESAATLAGLERRFSDEHLELYRVDGDVA 528 >gi|54027448|ref|YP_121690.1| hypothetical protein nfa54740 [Nocardia farcinica IFM 10152] gi|54018956|dbj|BAD60326.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=655 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 297/611 (49%), Positives = 354/611 (58%), Gaps = 78/611 (12%) Query 2 RWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVA 60 R+ GY+ L LL+A PLL PGYLLLRDAVSTPRSY++ +ALGL +APRA PQD AVA Sbjct 44 RFVTAGYSGALALLIAGPLLGPGYLLLRDAVSTPRSYLTDSALGLGDAAPRAVPQDTAVA 103 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 S VDGG+VV+ +L+L LW AG+GAA L A AA Q VAIT+A+WNPYVAERL Sbjct 104 TLSAAVDGGLVVRVVLVLALWAAGYGAAVAARELLRAPTAA-QLVAITVAVWNPYVAERL 162 Query 121 LQGHWSLLVGYGCLPWVA----------------------TAMLTMRTTVGAGWFGLFGL 158 LQGHWSLL GY LPW A TA L R +G GW L Sbjct 163 LQGHWSLLTGYAALPWTALAAYRIRCAASRAHPSAPEPASTAPLPRREAIG-GWAALTAC 221 Query 159 AFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGS 218 A AGLTP+G LLAA VAVV + W+ L L+ A PWL A+ L Sbjct 222 L---AAAGLTPTGALLAALVAVVTIG--------WRRLPWVLPPILLTAAPWLAATLL-- 268 Query 219 SLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLA 278 S ++ GV AFA RAEPGLGTLGSLA LGGIWN +AVP++R T A+ ++LLA Sbjct 269 SGAGAEPSDPTGVAAFAARAEPGLGTLGSLAGLGGIWNADAVPAARATPLALIGTLILLA 328 Query 279 MVAIGLPTVA--------RRPVAVPLLTLA---------AVSVMVPAVLATGPGLHALRV 321 +VA G+ VA +R P L A A +V++PA+ ATG G L Sbjct 329 LVAAGVRGVAASTRAPGTQRAAHDPDLATAVRRALLGLAAAAVVLPALAATGWGTGVLEW 388 Query 322 VVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLT----LRRWLR--------------- 362 +V PG G+LRD QK+VALAVPGYTL A LRRW Sbjct 389 LVVHVPGAGLLRDTQKYVALAVPGYTLCAAAGCTAIAAALRRWNTADDDGTTEQAGPREP 448 Query 363 -PATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMR 421 PA A V + LV L DLAWGV G V PV YP GWA VAA + D VAVLPAG R Sbjct 449 GPAVVATVLVVLLVAPLFDLAWGVGGAVRPVRYPDGWARVAATVTGD-ADVAVLPAGMFR 507 Query 422 RFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAA 481 RF +SG APVLDP PR + ADVL TG+L + G V GE AR V++LLL G P+ LAA Sbjct 508 RFEYSGLAPVLDPAPRMLPADVLQTGELPVRGRVVAGEGTRARTVEQLLLHGGSPAELAA 567 Query 482 AGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSG--ASSARLKATMLA 539 GVGW++VE + G +G +ARTL L + D +LALYRV G +G A + R + LA Sbjct 568 QGVGWVLVERRTPGPLGESARTLADLEPVYADADLALYRVPGAANGTDAGAGRRRWAGLA 627 Query 540 HWAWLSMLLVG 550 H AW LL G Sbjct 628 HLAWAGALLGG 638 >gi|312141429|ref|YP_004008765.1| integral membrane protein [Rhodococcus equi 103S] gi|311890768|emb|CBH50087.1| putative integral membrane protein [Rhodococcus equi 103S] Length=580 Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 265/528 (51%), Positives = 322/528 (61%), Gaps = 19/528 (3%) Query 8 YALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVALASHLV 66 Y+LVL +L+ PLL PGYLLLRDAVSTPRSYV+ +ALGL +A RA PQD+ +A+ S +V Sbjct 5 YSLVLAVLILGPLLGPGYLLLRDAVSTPRSYVTDSALGLADAAARAVPQDWLIAVLSSVV 64 Query 67 DGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWS 126 DGGVVVKA+L+ LWLAGWGAAR+VA LP G Q VA T+ +WNPYVAERLLQGHWS Sbjct 65 DGGVVVKAILVAALWLAGWGAARMVAVLLPGVGLGPQLVASTVMLWNPYVAERLLQGHWS 124 Query 127 LLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMP 186 LL GY LPWV A + +R GW L A AGLTP+G +LAA +A + Sbjct 125 LLTGYAALPWVVCAAVAIRRGRPGGWAALTLCL---AAAGLTPTGAILAAVLAAALLVRL 181 Query 187 GAG---RPRWQCGVAALGSALVGALPWLTASAL-GSSLTSHTAANQLGVTAFAPRAEPGL 242 R + L L + PWL A+ L G TS A AEPGL Sbjct 182 SGSWDYRKGARAACCLLALFLAASAPWLAATVLSGGGGTSDPAGVAAFAAR----AEPGL 237 Query 243 GTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARR---PVAVPLLTL 299 GT+GSLA LGG+WN AVP SRT+L+A+A +LL +VA GLP + RR PV L L Sbjct 238 GTIGSLAGLGGVWNSTAVPGSRTSLWALAGTALLLVVVACGLPALWRRRRHPVIGTLAVL 297 Query 300 AAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTL-R 358 A ++V++PA+ ATG GL V PG G+LRD QKWVALA P Y L+ A V L + Sbjct 298 AGLAVLLPALGATGWGLSVGEWAVVHVPGAGLLRDSQKWVALAAPLYALAAAAGVRALSK 357 Query 359 RWLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAA--AINADPRTVAVLP 416 R P V A+VL LPDL WGV G + PV YP W VA ++ + VAVLP Sbjct 358 RVSVPGVVPVAAIAAVVLALPDLVWGVAGALKPVQYPPAWRQVAQHLELSKEAGDVAVLP 417 Query 417 AGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVI-SGVTVPGEDAHARAVQELLLTGPH 475 AG RRF +SG APVLDP PR + DVL TG LV+ TV GE A A V++ LL G Sbjct 418 AGMFRRFPYSGDAPVLDPAPRMLPRDVLQTGQLVVGQAATVGGEGARATRVEQFLLAGAG 477 Query 476 PSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGG 523 P +LA V W++VE + G +G + RTL +L DDELALYRV G Sbjct 478 PQSLAEEDVRWVLVERTTPGPLGDSQRTLDQLEPIFADDELALYRVPG 525 >gi|111022155|ref|YP_705127.1| hypothetical protein RHA1_ro05188 [Rhodococcus jostii RHA1] gi|110821685|gb|ABG96969.1| conserved membrane protein [Rhodococcus jostii RHA1] Length=573 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 265/518 (52%), Positives = 328/518 (64%), Gaps = 17/518 (3%) Query 29 RDAVSTPRSYVSANALGLTSAP-RATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWGA 87 RDAVSTPRSY++ +ALGLT A RA PQD +A S +VDGGVVVKA+LLL LW AGWGA Sbjct 35 RDAVSTPRSYLTDSALGLTDAAARAVPQDALLATLSVVVDGGVVVKAILLLALWAAGWGA 94 Query 88 ARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLTMRTT 147 AR+V T LP G Q VA T+ +WNPYVAERLLQGHWSLL GY LPW A +T+R Sbjct 95 ARMVRTVLPTTGLGPQLVAATVTVWNPYVAERLLQGHWSLLTGYAALPWTVCAAVTIRRG 154 Query 148 VGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGA 207 GWF L +A AGLTP+G LLAA AV +A+PG W ALGS +V + Sbjct 155 HRRGWFALVAC---LAAAGLTPTGALLAAVTAVAVLALPGGRSAAWLRVTGALGSFVVAS 211 Query 208 LPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTL 267 PWL A+AL + + A AEPGL TLGSLA LGG+WN AVP +RTT Sbjct 212 APWLAATALAGGGGDGSDPAGVAAFAAR--AEPGLATLGSLAGLGGVWNETAVPDTRTTP 269 Query 268 FAVASAVVLLAMVAIGLPTVARR---PVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVD 324 FA+ ++LL +V GLP + RR PV L LA V+V++P + AT GL A R +V Sbjct 270 FALVGTLLLLGVVLCGLPALWRRRRHPVVAALSALALVAVLLPTLGATAWGLDAGRWLVQ 329 Query 325 AAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALVLTLPDLAWG 384 PG G+LRD QKWVALA P Y L+ A VL P T +V L ++L LPDLAWG Sbjct 330 NVPGAGLLRDAQKWVALAAPMYALAAAVAVLRR-----PGTWSVSAVLVVLLALPDLAWG 384 Query 385 VWGKVAPVHYPSGWAAVAAAI--NADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRAD 442 V G + PVHYP W VAA + +D VAVLP G R+FS+SG+APVLDP PR + D Sbjct 385 VGGALRPVHYPPSWQQVAAEMEHESDNGDVAVLPTGMFRKFSYSGAAPVLDPAPRMLPDD 444 Query 443 VLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAAR 502 VL TG+LV++G TV GE + A+ V+ +LLTG + LA+ GV W++VE D+ G G +A Sbjct 445 VLQTGELVVAGGTVEGEGSRAQQVERVLLTGGSAAELASLGVRWVLVERDTPGPRGESAT 504 Query 503 TLGRLAAAHRDDELALYRVGGQTS-GASSARLKATMLA 539 TL L D L LYRVGG + +S R++AT++A Sbjct 505 TLAGLERQFSDGHLELYRVGGDVARHEASDRVRATVVA 542 >gi|325673150|ref|ZP_08152843.1| transmembrane protein [Rhodococcus equi ATCC 33707] gi|325555985|gb|EGD25654.1| transmembrane protein [Rhodococcus equi ATCC 33707] Length=582 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 264/528 (50%), Positives = 321/528 (61%), Gaps = 19/528 (3%) Query 8 YALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVALASHLV 66 Y+LVL +L+ PLL PGYLLLRDAVSTPRSYV+ +ALGL +A RA PQD+ +A+ S +V Sbjct 16 YSLVLAVLILGPLLGPGYLLLRDAVSTPRSYVTDSALGLADAAARAVPQDWLIAVLSSVV 75 Query 67 DGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWS 126 DGGVVVKA+L+ LWLAGWGAAR+VA LP G Q VA T+ +WNPYVAERLLQGHWS Sbjct 76 DGGVVVKAILVAALWLAGWGAARMVAVLLPGVGLGPQLVASTVMLWNPYVAERLLQGHWS 135 Query 127 LLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMP 186 L GY LPWV A + +R GW L A AGLTP+G +LAA +A + Sbjct 136 LFTGYAALPWVVCAAVAIRRGRPGGWAALTLCL---AAAGLTPTGAILAAVLAAALLVRL 192 Query 187 GAG---RPRWQCGVAALGSALVGALPWLTASAL-GSSLTSHTAANQLGVTAFAPRAEPGL 242 R + L L + PWL A+ L G TS A AEPGL Sbjct 193 SGSWDYRKGARAACCLLALFLAASAPWLAATVLSGGGGTSDPAGVAAFAAR----AEPGL 248 Query 243 GTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARR---PVAVPLLTL 299 GT+GSLA LGG+WN AVP SRT+L+A+A +LL +VA GLP + RR PV L L Sbjct 249 GTIGSLAGLGGVWNSTAVPGSRTSLWALAGTALLLVVVACGLPALWRRRRHPVIGTLAVL 308 Query 300 AAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTL-R 358 A ++V++PA+ ATG GL V PG G+LRD QKWVALA P Y L+ A V L + Sbjct 309 AGLAVLLPALGATGWGLSVGAWAVVHVPGAGLLRDSQKWVALAAPLYALAAAAGVRALSK 368 Query 359 RWLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAA--AINADPRTVAVLP 416 R P V A+VL LPDL WGV G + PV YP W VA ++ + VAVLP Sbjct 369 RVSVPGAVPVAAIAAVVLALPDLVWGVAGALKPVQYPPAWRQVAQHLELSKEAGDVAVLP 428 Query 417 AGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVI-SGVTVPGEDAHARAVQELLLTGPH 475 AG RRF +SG APVLDP PR + DVL TG LV+ TV GE A A V++ LL G Sbjct 429 AGMFRRFPYSGDAPVLDPAPRMLPRDVLQTGQLVVGQAATVGGEGARATRVEQFLLAGAG 488 Query 476 PSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGG 523 P +LA V W++VE + G +G + RTL +L DDELALYRV G Sbjct 489 PQSLAEEDVRWVLVERTTPGPLGDSQRTLDQLEPIFADDELALYRVPG 536 >gi|262204286|ref|YP_003275494.1| hypothetical protein Gbro_4468 [Gordonia bronchialis DSM 43247] gi|262087633|gb|ACY23601.1| hypothetical protein Gbro_4468 [Gordonia bronchialis DSM 43247] Length=559 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 246/546 (46%), Positives = 315/546 (58%), Gaps = 27/546 (4%) Query 23 PGYLLLRDAVSTPRSYVSANALGLTS-APRATPQDFAVALASHLVDGGVVVKALLLLGLW 81 P YLL RDAVSTPRSYV+ ALG+ PRA PQD+ VA+ S +VDGG +V A+++ L Sbjct 34 PRYLLYRDAVSTPRSYVTDAALGVGDLPPRAVPQDWFVAMGSRVVDGGWLVVAIIVAALV 93 Query 82 LAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAM 141 +AG G RL +P AG AG A LAIWNPYVAERLLQGHW LLVGY L W+ M Sbjct 94 VAGVGYGRLAHRLVPGAGHAGAVAAAMLAIWNPYVAERLLQGHWGLLVGYAALGWIVVEM 153 Query 142 LTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV-VCVAMPGAGRPRWQCGVAAL 200 L + T W L GL VA+AGLTP+G LLAA V V +C+++ RPR CGVA Sbjct 154 LDL-TASPVRWCRLAGL---VAVAGLTPTGSLLAAAVLVTMCLSL--RVRPRIACGVA-- 205 Query 201 GSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAV 260 G + A PWL A +G+ ++ + AF RAEP LG LG+ A LGGIWN +AV Sbjct 206 GVWIASAAPWLAAGLIGTGSSTGVGGVE----AFGLRAEPFLGRLGTAAGLGGIWNADAV 261 Query 261 PSSRTTLFAVASAVVLLAMVAIGLPTV---ARRPVAVPLLTLAAVSVMVPAVLATGPGLH 317 P SRT +A +++ LL +V GL + R + L LA V +M+ + A GPG Sbjct 262 PDSRTIGWAAVASLCLLVVVVSGLIHLRAGDRSRASTALTLLAGVVLMLVILSAFGPGQA 321 Query 318 ALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALVLT 377 L VDA PG G+LRD QK++AL +P Y + AG VL LRRW A L +V Sbjct 322 VLGWAVDAIPGAGLLRDTQKFLALLMPAYAVGAAGAVLGLRRWFPGGFALAGVALLVVAP 381 Query 378 LPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPR 437 LPDLAWGV G++ PV YP+ W VA + AD VA+ P+ T+R + ++ S LDP PR Sbjct 382 LPDLAWGVGGQLRPVAYPAEWTTVAGIVTADDGAVALWPSDTLRHYGFANSVS-LDPAPR 440 Query 438 WVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDM 497 +RA V+ +G L + G V A AV++LL + P LA G+GW++VE+D Sbjct 441 MMRAPVVESGRLTVDGQEVDPASPPAVAVEQLLGSPGDPGELARLGIGWVLVEADP---- 496 Query 498 GAAARTLGRLAAAHRDDELALYRV-GGQTSGASSARLKATMLAHWAWLSMLLVGGAGAAG 556 AR G L + L L+R+ G QT A + AH WL M + GGA AA Sbjct 497 -PPARLRG-LEPIFAGESLRLFRIEGAQTVRADIGYRVVAVTAHLVWLVM-IAGGAVAAV 553 Query 557 YWVRRH 562 Y RRH Sbjct 554 Y-RRRH 558 >gi|254823263|ref|ZP_05228264.1| hypothetical protein MintA_25259 [Mycobacterium intracellulare ATCC 13950] Length=216 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 177/220 (81%), Positives = 189/220 (86%), Gaps = 8/220 (3%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RW RPGYALVL LL+ PLL PGYLLLRDAVSTPRSY+S ALGLTSAPRATPQDFAVA Sbjct 1 MRWTRPGYALVLALLVVGPLLAPGYLLLRDAVSTPRSYLSDTALGLTSAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASH+VDGG+VVKALL++GLWLAGWGAARLV ALP AGA GQFVAITLAIWNPYVAERL Sbjct 61 LASHVVDGGIVVKALLVVGLWLAGWGAARLVEVALPPAGAPGQFVAITLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAMLT+R G+ LFGLAFW+ALAGLTP+GLLLAATVA+ Sbjct 121 LQGHWSLLVGYGCLPWVATAMLTLRAGSGS----LFGLAFWIALAGLTPTGLLLAATVAL 176 Query 181 VCVAMPGAGR----PRWQCGVAALGSALVGALPWLTASAL 216 VCVA PG G PRW C AALG ALV ALPWL ASAL Sbjct 177 VCVAAPGDGTAGPWPRWWCAAAALGVALVAALPWLVASAL 216 >gi|339293291|gb|AEJ45402.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] Length=261 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 208/209 (99%), Positives = 209/209 (100%), Gaps = 0/209 (0%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA Sbjct 1 MRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL Sbjct 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV Sbjct 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAV 180 Query 181 VCVAMPGAGRPRWQCGVAALGSALVGALP 209 VCVAMPGAGRPRWQCGVAALGSALVGALP Sbjct 181 VCVAMPGAGRPRWQCGVAALGSALVGALP 209 >gi|343924449|ref|ZP_08763998.1| hypothetical protein GOALK_016_00470 [Gordonia alkanivorans NBRC 16433] gi|343765593|dbj|GAA10924.1| hypothetical protein GOALK_016_00470 [Gordonia alkanivorans NBRC 16433] Length=571 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 235/540 (44%), Positives = 303/540 (57%), Gaps = 23/540 (4%) Query 23 PGYLLLRDAVSTPRSYVSANALGLTS-APRATPQDFAVALASHLVDGGVVVKALLLLGLW 81 PGYLL RDAVSTPR++V+ LG+ PRA PQD+ VA+AS +VDGG V A+LL L Sbjct 34 PGYLLYRDAVSTPRTHVTDTTLGIGDLPPRAVPQDWFVAMASTVVDGGAAVTAILLAALV 93 Query 82 LAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAM 141 AG G RL +P AG AG A+ +AIWNPYVAERLLQGHWSLLVGY L W+ A+ Sbjct 94 FAGVGFGRLAFRLVPGAGRAGAVAAVLVAIWNPYVAERLLQGHWSLLVGYAALGWLLVAV 153 Query 142 LTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPR-WQCGVAAL 200 + +R G F L +A AGLTP+G +LA V V + GRP + + + Sbjct 154 VDLRDRPGPVRF--LQLGGLLAAAGLTPTGSVLAGIVLAVAL----IGRPVGLRSTIVVV 207 Query 201 GSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAV 260 ++ LPW+ S + + T+ AA GV AF R+EPGLG +G++ SLGGIWN +AV Sbjct 208 LLWILSTLPWVVTSVISDATTTSAAA---GVEAFGLRSEPGLGPVGTVLSLGGIWNADAV 264 Query 261 PSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLA----AVSVMVPAVLAT-GPG 315 P+SRT +A + L +VA G+ + RR A+ L A V V + VL+T GPG Sbjct 265 PASRTMWWAAVATFCFLLVVAAGVVALWRRRGALDPLVRAIGILTVVVSILLVLSTFGPG 324 Query 316 LHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALV 375 L V V+ G G+LRD QK+ AL VPG TL+ A V R + A L +V Sbjct 325 RWLLEVAVEHIAGAGLLRDTQKFSALLVPGATLAVAAAVAAACRRVPSGFALAGVALLVV 384 Query 376 LTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPL 435 LPDLAWG G V PV YP WAAV+A + D +VA+ PA T+R + ++ LDP Sbjct 385 APLPDLAWGAGGSVRPVAYPDDWAAVSAIVPDDQGSVALWPADTVRHYRFADGVS-LDPA 443 Query 436 PRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAG 495 R +RA V+ +G L + G V HA AV L G P LAA GVGW++VE++S Sbjct 444 ARMLRAPVIESGALTVDGEVVDPPSEHAAAVASALEAGGSPEDLAALGVGWVLVENNS-- 501 Query 496 DMGAAARTLGRLAAAHRDDELALYRVGGQTS-GASSARLKATMLAHWAWLSMLLVGGAGA 554 AR AH D+L LYRV GA +A + AH W +ML G GA Sbjct 502 ---PPARLAADARLAHDGDDLRLYRVDDPADRGAGAADRTMAIAAHLLWAAMLGTGVVGA 558 >gi|254822664|ref|ZP_05227665.1| hypothetical protein MintA_22234 [Mycobacterium intracellulare ATCC 13950] Length=253 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 170/225 (76%), Positives = 188/225 (84%), Gaps = 3/225 (1%) Query 322 VVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRP---ATAAVVCCLALVLTL 378 VVDA PG GVLRDGQKWVALAVPGYT++GAG V+TLRR P AA+VCCLAL+L L Sbjct 3 VVDAVPGFGVLRDGQKWVALAVPGYTVAGAGAVVTLRRRTPPPADVAAALVCCLALLLAL 62 Query 379 PDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRW 438 PDLAWGVWGKV+PVHYP GW AVAAAINA P VAVLPAGTMR F WSG+APVLDPLPRW Sbjct 63 PDLAWGVWGKVSPVHYPHGWTAVAAAINARPAAVAVLPAGTMRLFFWSGAAPVLDPLPRW 122 Query 439 VRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMG 498 VRA+VL++GDLVISG T+ GE AHAR VQ LLL GP PS LAAAGVGWLVVESDSAGDMG Sbjct 123 VRAEVLSSGDLVISGSTIAGEGAHAREVQRLLLAGPDPSALAAAGVGWLVVESDSAGDMG 182 Query 499 AAARTLGRLAAAHRDDELALYRVGGQTSGASSARLKATMLAHWAW 543 AAARTLG LA +RD +ALYRVGGQ++G S+ R AT++AH AW Sbjct 183 AAARTLGALAPVYRDHAIALYRVGGQSAGVSADRRAATVIAHAAW 227 >gi|296138151|ref|YP_003645394.1| hypothetical protein Tpau_0414 [Tsukamurella paurometabola DSM 20162] gi|296026285|gb|ADG77055.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=559 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 245/560 (44%), Positives = 305/560 (55%), Gaps = 36/560 (6%) Query 8 YALVLVLLLAAPLLRPG-YLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVALASHL 65 ++ VL ++ PL G YLLLRDAVSTPRSYV+ ALGL +A RATPQD+ VAL SH+ Sbjct 11 WSAVLAFVILGPLATAGRYLLLRDAVSTPRSYVTDAALGLGGNAARATPQDWLVALGSHV 70 Query 66 VDGGVVVKALLLLGLWLAGWGAARLVATALPAAG----AAGQFVAITLAIWNPYVAERLL 121 VDGGV+V LL + L AGWG R L A G G A T+A+WNP+VAERLL Sbjct 71 VDGGVLVTVLLFMALVAAGWGFGRCALAVLSAVGRPAGLGGGLAAATVALWNPFVAERLL 130 Query 122 QGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVV 181 QGHWSLL GY + W+ A L + GW G A +A GLTP+G + A +V Sbjct 131 QGHWSLLAGYAAIGWMVVAGLRL-----TGWRQAGGFAAALAAGGLTPTGAVFAVIAGLV 185 Query 182 CVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTA--ANQLGVTAFAPRAE 239 RW LG ++ A+PWL SL S T A+ ++ FA RAE Sbjct 186 VAPR------RWAV---LLGLFVLAAVPWLY-----PSLVSGTGVRADPASISVFAARAE 231 Query 240 PGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTL 299 PGLGT GSL LGGIWN +AVP L+ V VVLLA A+ L +V P L L Sbjct 232 PGLGTFGSLLGLGGIWNSQAVPDGAPWLWTV-FFVVLLAGGALVLRSVRTHPPLGRLALL 290 Query 300 AAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRR 359 A +V++P + ATGPG+ L +V A PG G+LRDGQKWVALAVP Y A V + Sbjct 291 ALAAVVLPTLAATGPGVAFLEHLVQAIPGSGLLRDGQKWVALAVPLYATCAAALVGAVPA 350 Query 360 WLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGT 419 RP V LP L WGV G + P YP+ W +AA + AD VAVLP G Sbjct 351 VARPGATVAAVV-IPVAVLPGLVWGVGGALTPTSYPASWRQIAAEVPADQGAVAVLPPGM 409 Query 420 MRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPG-EDAHARAVQELLLTGPH-PS 477 R F++ +AP LDP PR +RA VL TG+L + G + A A A L GP Sbjct 410 FRTFAYGPAAPALDPAPRMLRAPVLQTGELRVGGRAIDRVPGAAAAAEDALAAGGPELAG 469 Query 478 TLAAAGVGWLVVESDSA-GDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASS-ARLK- 534 LA GVGW++VE+ G A L L+ + L LYRV G+ + + +RL+ Sbjct 470 RLAVLGVGWVLVEAVVIDGAQAFPAVPLPGLSPVAQTPALRLYRVPGRIATVDAPSRLQR 529 Query 535 -ATMLAHWAWLSMLLVGGAG 553 AH WL L+VGGAG Sbjct 530 GGAWTAHIVWLG-LMVGGAG 548 >gi|296392558|ref|YP_003657442.1| hypothetical protein Srot_0120 [Segniliparus rotundus DSM 44985] gi|296179705|gb|ADG96611.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=577 Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 206/521 (40%), Positives = 275/521 (53%), Gaps = 22/521 (4%) Query 8 YALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVALASHLV 66 ++L L L+ PLL G+ L DAVS PRS++ A GL +APRATPQD A+A S+++ Sbjct 7 WSLTLSLVALGPLLGGGHWLWADAVSVPRSFLVDQAFGLADAAPRATPQDAALAAVSNIL 66 Query 67 DGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWS 126 DGG+VVKA+ +L L+ AG GAARLV LP + A VA T AI N +V ERLLQG WS Sbjct 67 DGGLVVKAITVLALFAAGTGAARLVREFLPESSWAVHIVAATFAIDNLWVVERLLQGQWS 126 Query 127 LLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMP 186 LLVGYG L VA +R T A G L FW+A GL P+G LL A +A + +A P Sbjct 127 LLVGYGALGHVAVVAARLRNTPSAS--GWAELGFWLAAGGLVPTGALLVAVLAGLVLAAP 184 Query 187 GAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLG 246 G R W+ A G A+V A PW A G G AFA R + G Sbjct 185 GGAR-WWRRTAAFTGLAIVAASPWAAAGLFGLCGPELADGGAAGAHAFATRPD----RAG 239 Query 247 SLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVA----IGLPTVARRPVAVPLLTLAAV 302 LA LGGIWN + P S+ + +A+ + L+A+VA + + + L L Sbjct 240 WLA-LGGIWNAGSTPDSQRGAWGLAADLALVALVAAGAFLLRRRLRQDRAFALLFALGLA 298 Query 303 SVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLR 362 +V + + ATG +L + P LGVLRDGQKW ALA P Y L+ + + ++W Sbjct 299 AVALVGLSATGFAQSSLAEAMATTPALGVLRDGQKWAALAWPAYALALSWIAMRAKQW-- 356 Query 363 PATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVL--PAGTM 420 A ++L +PD WG G++APV YP+ W V + + ADP A+L P G Sbjct 357 ----ACALVPVVLLLVPDALWGAGGRLAPVRYPNDWFEVRSLVAADPSHGALLTVPVGIT 412 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 R++ W+G +DP PR + V +GDLV++G VPGE A AR + G P A Sbjct 413 RQYDWAGRRTSIDPAPRLLPVPVAQSGDLVVAGAVVPGEGALARRAAAHVRAGAGPERFA 472 Query 481 AAGVGWLVVESDS-AGDMGAAARTLGRLAAAHRDDELALYR 520 +GW++VE D + AA L R D LYR Sbjct 473 EDSIGWVLVERDQLSALPPAALAALARFELVRSDQHFDLYR 513 >gi|254777381|ref|ZP_05218897.1| hypothetical protein MaviaA2_22311 [Mycobacterium avium subsp. avium ATCC 25291] Length=184 Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/171 (82%), Positives = 149/171 (88%), Gaps = 4/171 (2%) Query 1 VRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSAPRATPQDFAVA 60 +RW RPGYALVL LL+ PLLRPGYLLLRDAVSTPRSY+S ALGLT+APRA PQDFAVA Sbjct 1 MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAVPQDFAVA 60 Query 61 LASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERL 120 LASHL+DGGVVVK LLLLGLWLAGWGAARLVA LP AG G+FVA TLAIWNPYVAERL Sbjct 61 LASHLLDGGVVVKTLLLLGLWLAGWGAARLVALVLPGAGMPGEFVATTLAIWNPYVAERL 120 Query 121 LQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSG 171 LQGHWSLLVGYGCLPWVATAML +RT G G FGLAF++ALAGLTP+G Sbjct 121 LQGHWSLLVGYGCLPWVATAMLGLRT----GGAGFFGLAFFIALAGLTPTG 167 >gi|326385222|ref|ZP_08206887.1| hypothetical protein SCNU_19862 [Gordonia neofelifaecis NRRL B-59395] gi|326196041|gb|EGD53250.1| hypothetical protein SCNU_19862 [Gordonia neofelifaecis NRRL B-59395] Length=576 Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 223/554 (41%), Positives = 299/554 (54%), Gaps = 34/554 (6%) Query 11 VLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLT-SAPRATPQDFAVALASHLVDGG 69 +L L+ PL YLL RDAV+TPR ++A A G+ SAPRA PQD A+A+ S L+DGG Sbjct 29 LLTALICGPLFG-DYLLYRDAVATPRFPLTAAAFGIDGSAPRAVPQDGALAVGSSLIDGG 87 Query 70 VVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLV 129 +V L L ++ AG G RL ++P AG AG A T+ +WNP+VAERLLQGHWSLL Sbjct 88 WLVAGLTALAIFAAGVGFGRLALRSVPRAGTAGAVAAATVGVWNPWVAERLLQGHWSLLA 147 Query 130 GYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAG 189 GY L W A+ + W LA +A AGLTP+G +L VA V G G Sbjct 148 GYAALGWAVCAVQDLAHD--RSWRRWAVLAGILAAAGLTPTGSVLVLVVAAVTAVAAGVG 205 Query 190 RPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLA 249 G++ L L A PWL ASA + ++ G AFA RAEP LG+LG+ Sbjct 206 GR--DLGLSGL-LWLATASPWLVASA-----VASGVSSSGGAAAFALRAEPWLGSLGTAL 257 Query 250 SLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVAR------RPVAVPLLTLAAVS 303 LGG WN +AVP+SRTT +A+ + + LLA+V +G + R R V V L LAA + Sbjct 258 GLGGTWNADAVPASRTTPWALVATLALLAVVVVGTRQLMRSRARTDRTVVV-LGGLAATA 316 Query 304 VMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRP 363 V++ + AT PGL + +++ PG G+LRD QK++ALAVP ++ A V LR + Sbjct 317 VVLVVLAATPPGLAVMDLLLAHVPGAGLLRDTQKYLALAVPFAAIAAAAAVEALRTLVPA 376 Query 364 ATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADP--RT--VAVLPAGT 419 AA + LPDLAWGV G + P+ YP +A V + I D RT VA+ PA Sbjct 377 GFAAAAVVALIAAPLPDLAWGVGGSIRPIAYPDDYARVTSLIGDDASGRTGAVALWPAEN 436 Query 420 MRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTL 479 +RR S++ P L PLPR + A V+ +G+L + G TV V L G P L Sbjct 437 VRRLSFA-DGPSLTPLPRMLDAPVIVSGELTVDGETVDAPAGRTADVVAALRDGGDPRLL 495 Query 480 AAAGVGWLVV-ESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARLK--AT 536 A GVGW+VV ESD + A A + L +YR+ T + + A Sbjct 496 ARLGVGWVVVEESDPPARLAATAPVFA-------GEHLRVYRIVDATPPPTPTVTEWAAA 548 Query 537 MLAHWAWLSMLLVG 550 ++A W+S LL G Sbjct 549 IVAFALWISALLAG 562 >gi|306779058|ref|ZP_07417395.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308327986|gb|EFP16837.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] Length=103 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%) Query 474 PHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARL 533 PHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARL Sbjct 1 PHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASSARL 60 Query 534 KATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 576 KATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD Sbjct 61 KATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD 103 >gi|300789358|ref|YP_003769649.1| hypothetical protein AMED_7534 [Amycolatopsis mediterranei U32] gi|299798872|gb|ADJ49247.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340531005|gb|AEK46210.1| hypothetical protein RAM_38715 [Amycolatopsis mediterranei S699] Length=560 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 192/524 (37%), Positives = 253/524 (49%), Gaps = 38/524 (7%) Query 12 LVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGL-TSAPRATPQDFAVALASHLVDGGV 70 L + APLL G++L D V PR Y +A G+ + PR+ P D AVALA+ ++ G + Sbjct 17 LAFAVCAPLLGRGFVLSYDMVFAPRQYFVPDAFGVGDTLPRSVPADAAVALATTVLPGDI 76 Query 71 VVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVG 130 V K +LL ++ A +GA RLV P + VA T W PY AERL GHW LL+ Sbjct 77 VQKIVLLSAVYFAAFGAGRLV----PTEHLGTRLVAATAYAWTPYFAERLFIGHWPLLLT 132 Query 131 YGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGR 190 Y LPW+ A L +R L L A A LTP G +LAA V VV + R Sbjct 133 YAALPWIVGAGLAVRAREPGA---LPKLVIACAPAVLTPPGGVLAAAVVVVAAG---SRR 186 Query 191 PRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLAS 250 R +A LV LPWL + L + ++ GVTAF+ RAE L S+ Sbjct 187 LRQTVPIA-----LVLNLPWLVPTFLDAG---GAFSDPDGVTAFSARAESWGPALLSVLG 238 Query 251 LGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVM--VPA 308 LGGIWN E VP SR ++++A+ GL +A R P+ +L A+ V+ + A Sbjct 239 LGGIWNAETVPESRAVPLVPVLTLIVVAVAIAGLRPLAHRWGKAPVRSLTALGVLGVLLA 298 Query 309 VLATGPGLHAL-RVVVDAAPGLGVLRDGQKWVAL-AVP---GYTLSGAGTVLTLRRWLRP 363 LAT PG L PG G+LRD QKWVA A+P G+ L+ L+ Sbjct 299 SLATLPGGDTLLTAATRYVPGAGLLRDAQKWVAWWALPLALGFALAVEAAAAKLQTAGGR 358 Query 364 A---TAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTM 420 A TAAVV L LT+PDLAWG WG++ YP WAAV+ + P V LP Sbjct 359 AGLVTAAVVFPL---LTMPDLAWGGWGRLGTAQYPDDWAAVSGQLGDRPGDVLALPLSAF 415 Query 421 RRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLA 480 R F+W+ LDP PR + VL L + + GED V+ L Sbjct 416 RGFAWNADRTQLDPAPRVLPKPVLMDDTLQVGAERIAGEDPRIGDVR----AATSARELT 471 Query 481 AAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYRVGGQ 524 AG+GW++VE + G + R L D L LYR G+ Sbjct 472 DAGIGWILVEHGTPGYVD--PRLLAGATPVWSGDWLTLYRTPGE 513 >gi|330470627|ref|YP_004408370.1| hypothetical protein VAB18032_03430 [Verrucosispora maris AB-18-032] gi|328813598|gb|AEB47770.1| hypothetical protein VAB18032_03430 [Verrucosispora maris AB-18-032] Length=586 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 191/517 (37%), Positives = 256/517 (50%), Gaps = 38/517 (7%) Query 19 PLLRPGYLLLRDAVSTPRSYVSANALG-LTSAPRATPQDFAVALASHLVDGGVVVKALLL 77 PL RPGY+L D V PR +S + T+ PRA PQD VALA+ LV G ++ + +L+ Sbjct 37 PLARPGYVLRYDMVFVPRQALSWEVIAPATALPRAVPQDAVVALANQLVPGWLLQRLVLV 96 Query 78 LGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWV 137 L+ A GAARLV P A + VA W PY+AERLL G W LLV Y +PW+ Sbjct 97 AILYFAALGAARLV----PTRRTAVRVVAALGYAWTPYLAERLLIGQWGLLVAYAAMPWL 152 Query 138 ATAMLTMRTTVGAGWFGLFGLAFWVA-LAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCG 196 A + +R AG G A ++ +TP+G LLA V V + PG R Sbjct 153 VRAAIGVR----AGERGALRRLLLAAAVSAITPTGGLLALVVVAVLLVGPGTAR----SA 204 Query 197 VAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWN 256 +G L+ PWL A G + ++ GV FA RAE G L +LA GGIWN Sbjct 205 SVGVGVTLLLNAPWLVA---GFTSAGDGRSDPAGVAVFAARAENWAGPLVALAGTGGIWN 261 Query 257 GEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRPVA--VPLLTLAAVSVMVPAVLATGP 314 +A P+SR+ L + +LL + A G+P + RR A L L AV + AV P Sbjct 262 AQATPASRSGLLVPVATGLLLVVAAAGVPLLRRRWAAGVTNRLGLLAVGSWLAAVFGVLP 321 Query 315 G-LHALRVVVDAAPGLGVLRDGQKWVALAVPGYTLSGAGTVLTLRR---WL----RPATA 366 G + L +V PG G+LRDGQK L VP L L R WL AT Sbjct 322 GAVTVLGWLVANVPGAGLLRDGQK---LLVPYALLLAVAVALGAERLAGWLTARFDAATG 378 Query 367 AVVCCLALVL---TLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRF 423 V+ A +L LPDLA+G G++ PV +P+ WA VA + P V LP + + Sbjct 379 RVLLVGAALLPVAVLPDLAFGGVGRLRPVAWPADWAVVARLVQERPGEVISLPFQEYQSY 438 Query 424 SWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAG 483 SW+ V+DP PR++ VL L + G V GED A V++LL G +A AG Sbjct 439 SWNDDQVVIDPAPRYLGVPVLIDDTLRVDGTAVAGEDPQAARVRDLLDAG---EPVATAG 495 Query 484 VGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYR 520 W++V+ + + A TL L + D+L LY Sbjct 496 PRWVLVQRAAGPPVDPA--TLDGLHRVYAGDDLTLYE 530 >gi|145592757|ref|YP_001157054.1| hypothetical protein Strop_0191 [Salinispora tropica CNB-440] gi|145302094|gb|ABP52676.1| hypothetical protein Strop_0191 [Salinispora tropica CNB-440] Length=583 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 185/514 (36%), Positives = 254/514 (50%), Gaps = 30/514 (5%) Query 18 APLLRPGYLLLRDAVSTPRSYVSANALG-LTSAPRATPQDFAVALASHLVDGGVVVKALL 76 APL PGY+LL D V PR ++ + + + PRA P D V++ + LV G VV + L Sbjct 31 APLAAPGYVLLYDMVFVPRQPLTWDLVAPVQGLPRAVPMDAVVSVLTQLVPGWVVQRIAL 90 Query 77 LLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPW 136 + LA GA RLV T P + +A W PY+AERLL G W LLVGY LPW Sbjct 91 GGAVLLAAVGAGRLVPTERPGV----RLLAAVGYAWTPYLAERLLIGQWGLLVGYAALPW 146 Query 137 VATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCG 196 + A+L +R+ + + A A +TP+G L+A VV + P GR R Sbjct 147 LVRAVLELRSGRAG---AVARVLLAAAPAAITPTGGLIA--FGVVSLLAPQRGRWRGST- 200 Query 197 VAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWN 256 VA G AL+ A PW+TA+ + + S A GV AFA R E G L +LA GGIW+ Sbjct 201 VAVAGVALLNA-PWVTAALVTDAGGSSDPA---GVAAFAARGENWAGPLAALAGTGGIWS 256 Query 257 GEAVPSSRTTLFAVASAVVLLAMVAIGLPTVAR---RPVAVPLLTLAAVSVMVPAVLATG 313 +A P+SR +VLLA+ G + R R + LL LA ++ A+ A Sbjct 257 AQATPASRALPLVPLVTLVLLALAGFGFGLLRRRIPRDASARLLVLAGGGFLLAALGAVP 316 Query 314 PGLHALRVVVDAAPGLGVLRDGQKWVA----LAVPGYTLSGAGTVLTLRRWLRPATAAVV 369 LR V PG G+LRDGQK++A L V L + R R V+ Sbjct 317 GTADVLRWAVAQLPGAGLLRDGQKFLAPYALLLVVCVALGAERVAARMERRNREVAGVVL 376 Query 370 CCLALVLT--LPDLAWGVWGKVAPVHYPSGWAAVAAAINADP-RTVAVLPAGTMRRFSWS 426 + L+ +PDLA+G G++ PV YP+ W VAA + ADP V LP R + W+ Sbjct 377 VGVLLLPVAAMPDLAFGGVGRLWPVSYPADWRVVAARLAADPGGEVLALPLSGYRAYPWN 436 Query 427 GSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGVGW 486 VLDP PR++ A VL L + V V GE+ R ++++L G +A GV W Sbjct 437 SGRIVLDPAPRYLPAVVLIDDTLRVGDVAVTGENTRLREIRQVLGAG---RPVAETGVRW 493 Query 487 LVVESDSAGDMGAAARTLGRLAAAHRDDELALYR 520 ++V+ A + TL L H+ L LYR Sbjct 494 VLVQQHRADQVDPV--TLAGLEVVHQGTYLVLYR 525 >gi|284031024|ref|YP_003380955.1| hypothetical protein Kfla_3092 [Kribbella flavida DSM 17836] gi|283810317|gb|ADB32156.1| hypothetical protein Kfla_3092 [Kribbella flavida DSM 17836] Length=563 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 179/507 (36%), Positives = 255/507 (51%), Gaps = 48/507 (9%) Query 8 YALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALGLTSA-PRATPQDFAVALASHLV 66 + ++L +L+ APLL PGY++ D V P + + G+T+A PRA P D VAL + Sbjct 16 WPVLLTVLITAPLLAPGYVVGYDLVFVPDLTLRRDLFGVTTALPRAVPSDVVVALLDEVT 75 Query 67 DGGVVVKALLLLGLWLAGWGAA---RLVATALPAAGAAGQFVAITLAIWNPYVAERLLQG 123 G V+ K +L+ LAG+G R + P AGAA A+ L +WNP+VAERL G Sbjct 76 GGQVLNKLVLVAVPLLAGFGMTALWRELRLGGPLAGAA----AVALYVWNPFVAERLRLG 131 Query 124 HWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCV 183 W+LL+GY LPW+ + L +R G GW G F LA AL LT SG ++ +A + + Sbjct 132 AWALLLGYAALPWLVRSALRLRR--GEGWTG-FLLA--SALCALTASGGIVGLGLAALIL 186 Query 184 AMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLG 243 P RP G A L LPW+ A G + ++ + V AFA R E G Sbjct 187 LWPRGARPTPLIGAALLN------LPWIVA---GLARSAAATTDPASVPAFAARDEGYGG 237 Query 244 TLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARRP-VAVPLLTLAAV 302 + +L +LGG+WN VPS R L + A ++L + IG+ RR +A+ L+ A + Sbjct 238 VVPTLLTLGGVWNANVVPSGRGDLVPLVLAFLMLLVSCIGVSLWCRRERLAMALVVAAGL 297 Query 303 SVM--VPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVA-LAVPGYTLSGAGTVLTLR- 358 S++ V V+A P V PG G+ RDGQ+++ LA+ G LR Sbjct 298 SLLVAVAGVVAEDP----FAWTVAHVPGAGLFRDGQRYLGPLALLEAIGFGTAVAALLRV 353 Query 359 ---RWLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVL 415 WL ATAA+V A LP L V G YP+ W A + AD R ++ Sbjct 354 APLTWLVGATAALVPIAA----LPQL---VGGGFRLSQYPADWEQANAVLTADARPGELM 406 Query 416 --PAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQEL---- 469 P + R SW+ PVLDP+PR+ + +L++ G + GED A AV + Sbjct 407 PWPFESYRAPSWNTRRPVLDPMPRYFSKPAVVPDELIVDGDRLAGEDPRAAAVADALRAS 466 Query 470 LLTGPHPS-TLAAAGVGWLVVESDSAG 495 + TG PS L GVGW+VV+ ++ G Sbjct 467 VRTGADPSPELLRQGVGWIVVDREAGG 493 >gi|302870419|ref|YP_003839056.1| hypothetical protein Micau_5977 [Micromonospora aurantiaca ATCC 27029] gi|315503304|ref|YP_004082191.1| hypothetical protein ML5_2518 [Micromonospora sp. L5] gi|302573278|gb|ADL49480.1| hypothetical protein Micau_5977 [Micromonospora aurantiaca ATCC 27029] gi|315409923|gb|ADU08040.1| hypothetical protein ML5_2518 [Micromonospora sp. L5] Length=569 Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 188/522 (37%), Positives = 260/522 (50%), Gaps = 32/522 (6%) Query 9 ALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALG-LTSAPRATPQDFAVALASHLVD 67 A+V+ L+ APL PGY L D V PR +S + + S PRA P D V+L + LV Sbjct 26 AVVVTALILAPLAAPGYALRYDMVFVPRQPLSWDLVAPAQSLPRAVPMDALVSLVTQLVP 85 Query 68 GGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSL 127 G VV + L + A GA RLV P A Q VA W PY+AERLL G W L Sbjct 86 GWVVQRVALAGAVLFAAVGAGRLV----PTERRAVQLVAAVAYAWTPYLAERLLIGQWGL 141 Query 128 LVGYGCLPWVATAMLTMRTTVGAGWFG-LFGLAFWVALAGLTPSGLLLA-ATVAVVCVAM 185 L+ Y LPW+ A L +R AG G L + A A +TP+G L+A ATV V+ Sbjct 142 LLAYAALPWLVRAALDLR----AGRDGALARVVLLAAPAAITPTGGLIALATVLVLA--- 194 Query 186 PGAGRPRWQCGVAALGSALVGALPWLTASAL-GSSLTSHTAANQLGVTAFAPRAEPGLGT 244 A R R + A+G + PW+ A+ + G+ TS A AE G Sbjct 195 --ADRARLRLSAVAVGGVALLNAPWIVAALVTGAGGTSDPAGVAAFAAR----AENWAGP 248 Query 245 LGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARR---PVAVPLLTLAA 301 L +LA GGIWN +A PSSR+ A + +VL+ + +G + RR AV L LA Sbjct 249 LVALAGTGGIWNVQATPSSRSGTPAPLATLVLVVLAVVGAGLLRRRLPAGAAVRLGVLAG 308 Query 302 VSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVA-LAVPGYTLSGAGTVLTLRRW 360 + ++ A+ G AL V PG G+LRDGQK++A A+ + G + R Sbjct 309 GAYLLAALAVLPGGNTALSWAVAHVPGAGLLRDGQKFLAPYALVLVVCAALGAERLVARI 368 Query 361 LRPATAAVVCCLALVLT--LPDLAWGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAG 418 R V+ L L+ +PDLA+G G+++PV YP+ W AVA + DP + LP Sbjct 369 DREVGGIVLAGLLLLPLAAMPDLAFGGAGRISPVRYPADWQAVAERLPDDPGEILALPLT 428 Query 419 TMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPST 478 T R + W+ VLDP PR++ VLT LV+ V V GE+ R V+ +L G Sbjct 429 TYRAYPWNPGRVVLDPAPRYLPGTVLTDDTLVVDDVAVAGENPRLREVRRVLAEG---RP 485 Query 479 LAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYR 520 ++A GV W+VV+ + + A L L + + L+LYR Sbjct 486 VSATGVRWVVVQHGTPSTVDPA--VLAGLDLRYEGESLSLYR 525 >gi|159035882|ref|YP_001535135.1| hypothetical protein Sare_0209 [Salinispora arenicola CNS-205] gi|157914717|gb|ABV96144.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=568 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 188/516 (37%), Positives = 256/516 (50%), Gaps = 36/516 (6%) Query 19 PLLRPGYLLLRDAVSTPRSYVSANALG-LTSAPRATPQDFAVALASHLVDGGVVVKALLL 77 PL PGY+L D V PR ++ + + S PRA P D V+L + LV G V + +L Sbjct 32 PLAAPGYVLRYDMVFVPRQPLTWDLVAPAQSLPRAVPMDAVVSLVTQLVPGWAVQRIVLA 91 Query 78 LGLWLAGWGAARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWV 137 + LA GAARLV T G A+ A W PY+AERLL G W LLV Y LPW+ Sbjct 92 GTVLLAAVGAARLVPTQRRGVRLLG---AVGYA-WTPYLAERLLIGQWGLLVAYAALPWL 147 Query 138 ATAMLTMRTTVGAGWFG-LFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRW-QC 195 A+L +R AG G L + A A +TP+G L+A V VA+ R RW + Sbjct 148 VRAVLDLR----AGRAGALARVVLTAAPAAITPTGGLIAFGV----VALLSPQRERWWRS 199 Query 196 GVAALGSALVGALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIW 255 VA +G A++ + PW+TA+ + + + A GV AFA R E G L +LA GGIW Sbjct 200 TVAVVGVAVLNS-PWVTAALVTRAGGTSDPA---GVAAFAARGENWAGPLAALAGTGGIW 255 Query 256 NGEAVPSSRTTLFAVASAVVLLAMVAIGLPTVARR---PVAVPLLTLAAVSVMVPAVLAT 312 + +A P+SR +VLL + A G+ + RR ++ L+ LA ++ A L Sbjct 256 SAQATPASRALPLVPLVTLVLLVLAAAGVGLLRRRLPPGISARLVVLAGAGFLL-AALGA 314 Query 313 GPGL-HALRVVVDAAPGLGVLRDGQKWVA----LAVPGYTLSGAGTVLTLRRWLRP--AT 365 PG LR V PG G+LRDGQK++A L + L V + R R Sbjct 315 APGTAEVLRWAVAHLPGAGLLRDGQKFLAPYALLLMVCAALGVERLVTRVERVSREVAGV 374 Query 366 AAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADP-RTVAVLPAGTMRRFS 424 V L V +PDLA+G G++ PV YP+ W VA + DP V LP R + Sbjct 375 VLVGVLLLPVAVMPDLAFGGAGRLRPVSYPADWREVAGRLADDPGGEVLALPLSGYRAYP 434 Query 425 WSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAAGV 484 W+ VLDP PR++ A VLT L + V V GE+ R ++ LL G +A GV Sbjct 435 WNPGRIVLDPAPRYLPAAVLTDDTLRVGDVAVLGENPRLREIRGLLEDG---RPVAVTGV 491 Query 485 GWLVVESDSAGDMGAAARTLGRLAAAHRDDELALYR 520 W+VV+ A + A TL ++ L LYR Sbjct 492 RWVVVQHHRANRVDPA--TLAGFEVVYQGMFLTLYR 525 >gi|336325126|ref|YP_004605092.1| hypothetical protein CRES_0566 [Corynebacterium resistens DSM 45100] gi|336101108|gb|AEI08928.1| putative membrane protein [Corynebacterium resistens DSM 45100] Length=620 Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 160/524 (31%), Positives = 248/524 (48%), Gaps = 59/524 (11%) Query 28 LRDAVSTPRSYVSANALGLTSA-PRATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWG 86 LRD R ++ +G T A PRA PQD +A+ S + + +++ L + Sbjct 56 LRDMFIPARVTANSITMGATEAAPRAVPQDTMLAILSPAIPASTIAAFVMVFSAALGAFA 115 Query 87 AARLVATALPAAGAAGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLTMRT 146 AA++V T + QF A L +WNPYV ERLLQGHWSL+ A + + Sbjct 116 AAKMVQT-MAGGRLIAQFTASLLTVWNPYVVERLLQGHWSLVA-------AAVLLPAVAY 167 Query 147 TVGAGWFGLFGLAFWVALAGLTPSGLLLAATVAVVCVAMPGAGRPRW-QCGVAALGSALV 205 + +G+ + +A +TP+GL+LAA ++++ + P+W + G A S L+ Sbjct 168 FAASRLWGMLLVT--MAFCAMTPTGLVLAAIISLIFL-------PKWSERGWIAFASLLM 218 Query 206 GALPWLTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRT 265 G+ PW+ AS + + T + FAPRAE GTLG+L S GGIWN EA SR Sbjct 219 GS-PWIIASVVNARSVGGTLVDSASAEVFAPRAEFNTGTLGALLSFGGIWNAEAAAPSRI 277 Query 266 TLFAVASAVVLLAMVAIGLPTVARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDA 325 L + + L++++ +G+ + R + LLT+AA ++PA L+T G+ + ++ Sbjct 278 ALSEIF-GIALVSILLLGIRELWRVYRGLTLLTIAA--FLIPAFLSTEIGIEVMGWLIST 334 Query 326 APGLGVLRDGQKWVALAVPGYTL----------------------SGAGTVLTLRRWLRP 363 PG G+LRD QK+VALA PG L A T RWL+ Sbjct 335 VPGSGLLRDSQKFVALAFPGMVLLIGVVVERMDYRRDRSPSFFLEPEAEKASTSARWLQR 394 Query 364 ATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWAAVAAAINADPR-TVAVLPAGTMRR 422 ++C L ++ +P L V VAP W ++ +++A PR V +LP G R Sbjct 395 GVGVLLCVL-IIGNVPGLPKDV-APVAPRSVSPVWEQISNSVSAAPRGKVLLLPPGNYRL 452 Query 423 FSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPGEDAHARAVQELLLTGPHPSTLAAA 482 G PV+DP + + L G LV+ V G+ ++E++ TL Sbjct 453 ---HGEYPVIDPALKLLPGTPLDPGYLVVDNRIVDGDKTSMELLREIMQGR---DTLQEN 506 Query 483 GVGWLVVESDSAG---DMGAAARTLGRLAAAHRDD--ELALYRV 521 GVGW++++ S DM A + L D +LYR+ Sbjct 507 GVGWVLIDWGSVSPRLDMSRAVKALNEGGYQRTLDIENYSLYRI 550 >gi|213965389|ref|ZP_03393585.1| conserved transmembrane protein [Corynebacterium amycolatum SK46] gi|213952005|gb|EEB63391.1| conserved transmembrane protein [Corynebacterium amycolatum SK46] Length=610 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 175/516 (34%), Positives = 253/516 (50%), Gaps = 65/516 (12%) Query 51 RATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWGAARLV---------------ATAL 95 RA PQD A+ + VD V+ ++ + G AA L A+ + Sbjct 83 RAVPQDTALWALGYFVDASHWVRFGMVGACLIGGLAAAELARRLTRHGSGTSSVSGASLV 142 Query 96 PAAGA-AGQFVAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFG 154 P + A Q +A T+ +WNP+V ERLLQG WSL++ LP V A Sbjct 143 PMTPSLASQLIAPTMLLWNPFVVERLLQGQWSLVIAVLLLPAVVLATQ------------ 190 Query 155 LFGLAFW----VALAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGALPW 210 G A W +A AGLTP+G LLA +V A R + +AA A+ + PW Sbjct 191 -MGSALWRTSAIAAAGLTPTGALLAGITGIVA-----ARNNRDRAWIAATTVAV--SSPW 242 Query 211 LTASALGSSLTSHTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAV 270 L AS L S + +++ G AFA RAE +GTLGSL LGGIWN +AVP +R F+ Sbjct 243 LVASLLNPS--AAGSSDVAGAAAFAARAEAHVGTLGSLLGLGGIWNKQAVPLTREVGFSA 300 Query 271 ASAVVLLAMVAIGLPTV-ARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGL 329 + LL ++ +G V + L+ A ++++ A+ AT PG+ + ++ PG Sbjct 301 IMVLALLVLMGLGFRRVWHSQERWRGLIITGATAIVLVALAATTPGILMMGWALEHIPGA 360 Query 330 GVLRDGQKWVALAVPGYTLSGAGTVLTLRRWLRPATAAV-------VCCLALVLTLPDLA 382 G+LRD QKW+ALAVP Y + A L R R ATA + V L ++ +P L Sbjct 361 GLLRDAQKWIALAVPAYVILAASGAEYLARRARGATANIGQWLATGVSALIIIAAVPTLP 420 Query 383 WGVWGKVAPVHYPSGWAAVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRAD 442 V + P+ GW+AV+ + D VAVLPAG+ R PVLDP + + A Sbjct 421 ADV-APLRPIPSWEGWSAVSGVVALDDDHVAVLPAGSYRIID---GRPVLDPATKILPAP 476 Query 443 VLTTGDLVISGVTVPGEDAHARAVQELLLTGPHP--------STLAAAGVGWLVVESDSA 494 V+++G+L++SG +V GE A V+ LL G +L GVGW++VE +S Sbjct 477 VVSSGELIVSGQSVSGEG--ATTVERTLLGGAKRQEELESALQSLRDQGVGWVLVE-NSP 533 Query 495 GDMGAAARTLGRLAAAHRDDELALYRVGGQTSGASS 530 G+ G +A + L + +L LY V G A+ Sbjct 534 GNFGDSADIVAALDPVYETPDLQLYHVPGVIEPATQ 569 Lambda K H 0.322 0.135 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1297990237818 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40