BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0229c

Length=226
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|289572808|ref|ZP_06453035.1|  toxin [Mycobacterium tuberculosi...   451    4e-125
gi|15607370|ref|NP_214743.1|  hypothetical protein Rv0229c [Mycob...   451    4e-125
gi|289445761|ref|ZP_06435505.1|  toxin [Mycobacterium tuberculosi...   449    2e-124
gi|167968774|ref|ZP_02551051.1|  hypothetical protein MtubH3_1235...   275    2e-72 
gi|289748705|ref|ZP_06508083.1|  LOW QUALITY PROTEIN: conserved m...   233    1e-59 
gi|254549168|ref|ZP_05139615.1|  hypothetical protein Mtube_01671...   127    2e-27 
gi|297154824|gb|ADI04536.1|  hypothetical protein SBI_01415 [Stre...   120    1e-25 
gi|254388989|ref|ZP_05004220.1|  conserved membrane protein [Stre...   118    8e-25 
gi|345013748|ref|YP_004816102.1|  PilT protein domain-containing ...   117    1e-24 
gi|254383838|ref|ZP_04999186.1|  conserved hypothetical protein [...   114    7e-24 
gi|302536099|ref|ZP_07288441.1|  conserved hypothetical protein [...   114    9e-24 
gi|290958509|ref|YP_003489691.1|  hypothetical protein SCAB_40681...   114    1e-23 
gi|297160784|gb|ADI10496.1|  hypothetical protein SBI_07376 [Stre...   112    3e-23 
gi|343479040|gb|AEM44209.1|  hypothetical protein [uncultured bac...   112    5e-23 
gi|302559325|ref|ZP_07311667.1|  PIN family toxin-antitoxin syste...   110    1e-22 
gi|302544584|ref|ZP_07296926.1|  PIN family toxin-antitoxin syste...   108    6e-22 
gi|311897824|dbj|BAJ30232.1|  hypothetical protein KSE_44490 [Kit...   107    2e-21 
gi|340627758|ref|YP_004746210.1|  hypothetical protein MCAN_27841...   106    3e-21 
gi|15609894|ref|NP_217273.1|  hypothetical protein Rv2757c [Mycob...   105    4e-21 
gi|308378090|ref|ZP_07668665.1|  putative type I restriction-modi...   103    2e-20 
gi|315504329|ref|YP_004083216.1|  pilt protein domain-containing ...   102    4e-20 
gi|302869194|ref|YP_003837831.1|  PilT protein domain-containing ...   102    5e-20 
gi|302557955|ref|ZP_07310297.1|  PIN family toxin-antitoxin syste...   101    1e-19 
gi|284991226|ref|YP_003409780.1|  PilT protein domain-containing ...  94.7    8e-18 
gi|297199892|ref|ZP_06917289.1|  conserved hypothetical protein [...  87.8    1e-15 
gi|297163315|gb|ADI13027.1|  PilT protein domain protein [Strepto...  86.7    2e-15 
gi|302546829|ref|ZP_07299171.1|  PIN family toxin-antitoxin syste...  84.0    2e-14 
gi|240172880|ref|ZP_04751539.1|  hypothetical protein MkanA1_2644...  83.6    2e-14 
gi|15842082|ref|NP_337119.1|  hypothetical protein MT2622 [Mycoba...  82.0    5e-14 
gi|306780585|ref|ZP_07418922.1|  toxin [Mycobacterium tuberculosi...  82.0    5e-14 
gi|15609683|ref|NP_217062.1|  hypothetical protein Rv2546 [Mycoba...  82.0    6e-14 
gi|167968845|ref|ZP_02551122.1|  hypothetical protein MtubH3_1276...  81.6    7e-14 
gi|302534504|ref|ZP_07286846.1|  predicted protein [Streptomyces ...  77.8    1e-12 
gi|339295424|gb|AEJ47535.1|  hypothetical protein CCDC5079_2345 [...  76.6    2e-12 
gi|158318849|ref|YP_001511357.1|  PilT domain-containing protein ...  75.5    5e-12 
gi|326331752|ref|ZP_08198040.1|  toxin-antitoxin system, toxin co...  74.3    1e-11 
gi|229598010|pdb|3H87|A  Chain A, Rv0301 Rv0300 Toxin Antitoxin C...  73.9    2e-11 
gi|289748072|ref|ZP_06507450.1|  conserved hypothetical protein [...  73.6    2e-11 
gi|15607442|ref|NP_214815.1|  hypothetical protein Rv0301 [Mycoba...  73.6    2e-11 
gi|336119997|ref|YP_004574775.1|  hypothetical protein MLP_43580 ...  73.2    3e-11 
gi|336117846|ref|YP_004572614.1|  hypothetical protein MLP_21970 ...  72.0    7e-11 
gi|339630376|ref|YP_004722018.1|  hypothetical protein MAF_03030 ...  71.6    8e-11 
gi|291452355|ref|ZP_06591745.1|  conserved hypothetical protein [...  71.2    1e-10 
gi|315446124|ref|YP_004079003.1|  nucleic acid-binding protein, c...  70.5    2e-10 
gi|239988547|ref|ZP_04709211.1|  hypothetical protein SrosN1_1465...  70.5    2e-10 
gi|145225766|ref|YP_001136444.1|  PilT domain-containing protein ...  69.7    3e-10 
gi|269124363|ref|YP_003297733.1|  PilT protein domain-containing ...  68.6    6e-10 
gi|315441643|ref|YP_004074520.1|  nucleic acid-binding protein, c...  68.6    7e-10 
gi|284034116|ref|YP_003384047.1|  PilT protein domain-containing ...  68.2    9e-10 
gi|119854953|ref|YP_935558.1|  PilT domain-containing protein [My...  67.4    1e-09 


>gi|289572808|ref|ZP_06453035.1| toxin [Mycobacterium tuberculosis K85]
 gi|289537239|gb|EFD41817.1| toxin [Mycobacterium tuberculosis K85]
Length=547

 Score =  451 bits (1160),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    VRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP  60
            VRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP
Sbjct  322  VRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP  381

Query  61   AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG  120
            AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG
Sbjct  382  AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG  441

Query  121  AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR  180
            AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR
Sbjct  442  AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR  501

Query  181  KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  226
            KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID
Sbjct  502  KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  547


>gi|15607370|ref|NP_214743.1| hypothetical protein Rv0229c [Mycobacterium tuberculosis H37Rv]
 gi|15839609|ref|NP_334646.1| hypothetical protein MT0239 [Mycobacterium tuberculosis CDC1551]
 gi|31791406|ref|NP_853899.1| hypothetical protein Mb0234c [Mycobacterium bovis AF2122/97]
 42 more sequence titles
 Length=226

 Score =  451 bits (1159),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 225/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    VRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP  60
            +RQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP
Sbjct  1    MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP  60

Query  61   AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG  120
            AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG
Sbjct  61   AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG  120

Query  121  AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR  180
            AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR
Sbjct  121  AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR  180

Query  181  KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  226
            KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID
Sbjct  181  KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  226


>gi|289445761|ref|ZP_06435505.1| toxin [Mycobacterium tuberculosis CPHL_A]
 gi|289418719|gb|EFD15920.1| toxin [Mycobacterium tuberculosis CPHL_A]
Length=226

 Score =  449 bits (1154),  Expect = 2e-124, Method: Compositional matrix adjust.
 Identities = 224/226 (99%), Positives = 225/226 (99%), Gaps = 0/226 (0%)

Query  1    VRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP  60
            +RQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP
Sbjct  1    MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSYRIGHDDDQRHRQRGP  60

Query  61   AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG  120
            AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG
Sbjct  61   AASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRLSRPAVRRAVEPLAEAG  120

Query  121  AVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR  180
            AVARTQITDLEVGY ARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR
Sbjct  121  AVARTQITDLEVGYPARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLAARSQRGR  180

Query  181  KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  226
            KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID
Sbjct  181  KIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  226


>gi|167968774|ref|ZP_02551051.1| hypothetical protein MtubH3_12355 [Mycobacterium tuberculosis 
H37Ra]
 gi|253797151|ref|YP_003030152.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|308231499|ref|ZP_07412656.2| toxin [Mycobacterium tuberculosis SUMu001]
 27 more sequence titles
 Length=137

 Score =  275 bits (704),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL
Sbjct  1    MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  60

Query  150  SAFDLIESTASHHRRALGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA  209
            SAFDLIESTASHHRRALGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA
Sbjct  61   SAFDLIESTASHHRRALGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA  120

Query  210  AVTGQPCQWIVPAGTID  226
            AVTGQPCQWIVPAGTID
Sbjct  121  AVTGQPCQWIVPAGTID  137


>gi|289748705|ref|ZP_06508083.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T92]
 gi|289689292|gb|EFD56721.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T92]
Length=126

 Score =  233 bits (595),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 116/120 (97%), Positives = 116/120 (97%), Gaps = 0/120 (0%)

Query  107  PAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRAL  166
            P    AVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRAL
Sbjct  7    PPCGGAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHRRAL  66

Query  167  GIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  226
            GIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID
Sbjct  67   GIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTID  126


>gi|254549168|ref|ZP_05139615.1| hypothetical protein Mtube_01671 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=71

 Score =  127 bits (318),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  166  LGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTI  225
            LGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTI
Sbjct  11   LGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTI  70

Query  226  D  226
            D
Sbjct  71   D  71


>gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Streptomyces bingchenggensis 
BCW-1]
Length=139

 Score =  120 bits (302),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 62/138 (45%), Positives = 88/138 (64%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M+ ++L+D S ++R  +P V   ++PL E G +A     ++EV YSARNE + +RL   L
Sbjct  1    MSERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEIEVMYSARNENDAKRLHWFL  60

Query  150  SAFDLIESTASHHRRALGIQRLLAAR-SQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
            + FD +  T     RA  +QR   A+ + R   +PDLLIAAA E H + VLHYD D+D+I
Sbjct  61   AGFDYLPMTDEVWDRAKDVQRQAIAKGNHRALSMPDLLIAAAAERHVVTVLHYDQDYDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            AA+TGQP +W+V AGT D
Sbjct  121  AAITGQPMKWVVEAGTAD  138


>gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294814925|ref|ZP_06773568.1| toxin [Streptomyces clavuligerus ATCC 27064]
 gi|326443296|ref|ZP_08218030.1| PilT protein domain-containing protein [Streptomyces clavuligerus 
ATCC 27064]
 gi|197702707|gb|EDY48519.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294327524|gb|EFG09167.1| toxin [Streptomyces clavuligerus ATCC 27064]
Length=139

 Score =  118 bits (295),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 63/135 (47%), Positives = 84/135 (63%), Gaps = 1/135 (0%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAF  152
            +YL+D SV  R  +P VR A+EP    G V  + I DLE+ +SARN  +++R++    AF
Sbjct  5    RYLVDMSVWARAGKPGVRAALEPKLLRGLVGTSGIIDLELLFSARNADDYERMLGRRQAF  64

Query  153  DLIESTASHHRRALGIQRLLAAR-SQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAV  211
            +   +T     RA+ +Q   A + + R   IPDLL+AA  E HGL +LHYD DFDLIA V
Sbjct  65   EWFPTTDEIVARAIEVQGFCARKGNHRALSIPDLLVAATAERHGLTLLHYDGDFDLIAEV  124

Query  212  TGQPCQWIVPAGTID  226
            TGQ  +WIVP GT D
Sbjct  125  TGQLTEWIVPRGTAD  139


>gi|345013748|ref|YP_004816102.1| PilT protein domain-containing protein [Streptomyces violaceusniger 
Tu 4113]
 gi|344040097|gb|AEM85822.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=139

 Score =  117 bits (294),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 60/138 (44%), Positives = 85/138 (62%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M+ ++L+D S ++R  +P V   ++PL E G +A     ++EV YSARN+ + +RL   L
Sbjct  1    MSERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEMEVMYSARNDNDAKRLHWFL  60

Query  150  SAFDLIESTASHHRRALGIQRLLAAR-SQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
            S FD +        RA  IQR    + + R   +PDLLIAAA E H + VLHYD D+D+I
Sbjct  61   SGFDYLPMPDEVWDRAKDIQRQAITKGNHRALSMPDLLIAAAAERHAVTVLHYDQDYDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            AA+TGQP +W+  AGT D
Sbjct  121  AAITGQPMKWVTEAGTAD  138


>gi|254383838|ref|ZP_04999186.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194342731|gb|EDX23697.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=138

 Score =  114 bits (286),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 58/138 (43%), Positives = 87/138 (64%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M+ ++L+D S + R  +PAV   ++PL  AG +A     +LEV YSAR++ + +R+   +
Sbjct  1    MSERFLIDKSALARYPKPAVHAVIDPLHNAGLLAVCGAVELEVMYSARSKADARRVREGM  60

Query  150  SAFDLIESTASHHRRALGIQR-LLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
            +AFD + +      RAL +Q  L+   + +   +PDL+IAA  E HG  VLHYD D+D+I
Sbjct  61   AAFDWLPTPDEAWDRALEVQDALIGEGNWKAVSLPDLIIAATAERHGATVLHYDGDYDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            AAVTGQP +W+VP G  D
Sbjct  121  AAVTGQPMRWVVPRGAAD  138


>gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302444994|gb|EFL16810.1| conserved hypothetical protein [Streptomyces sp. C]
Length=138

 Score =  114 bits (286),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 59/138 (43%), Positives = 85/138 (62%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M  ++L+D S + R  +PAVR  ++PL  AG +      +LEV YSAR++ +  R+   L
Sbjct  1    MTGRFLIDKSALARYPKPAVRAVIDPLHVAGVLGVCGAVELEVLYSARSKGDADRVRAGL  60

Query  150  SAFDLIESTASHHRRALGIQR-LLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
             AF  + +      RAL +Q+ L+ A + +   +PDL+IAA  E HG  VLHYD D+D+I
Sbjct  61   GAFAWLSTPDEVWDRALDVQKQLIVAGNWKAVSLPDLVIAATAERHGATVLHYDGDYDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            A VTGQP +W+VP GT D
Sbjct  121  AEVTGQPMRWVVPRGTAD  138


>gi|290958509|ref|YP_003489691.1| hypothetical protein SCAB_40681 [Streptomyces scabiei 87.22]
 gi|260648035|emb|CBG71143.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=139

 Score =  114 bits (284),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 60/138 (44%), Positives = 86/138 (63%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M  +YL+D S + R ++P+V+  ++PL E   +A  Q T+ E+ +SAR+ +E  R+   L
Sbjct  1    MQDRYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDSSEATRISTWL  60

Query  150  SAFDLIESTASHHRRALGIQR-LLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
             AFD + +      RAL IQR  L A   R   +PDLLIAA  E +   VLHYD DFD+I
Sbjct  61   HAFDYLRTDDDTFTRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDFDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            A++TGQP +W+VP G+ D
Sbjct  121  ASLTGQPTEWVVPPGSAD  138


>gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Streptomyces bingchenggensis 
BCW-1]
Length=138

 Score =  112 bits (281),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 58/138 (43%), Positives = 88/138 (64%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M  +YL+D S + R  +PA R  +EPL  AG +A     +LEV +SAR++ + +R+   +
Sbjct  1    MTDRYLIDKSALARYPKPAARAVIEPLHNAGLLAVCGAVELEVLHSARSKGDAERIRDEM  60

Query  150  SAFDLIESTASHHRRALGIQ-RLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
              FD + +      RAL +Q +L+AA + +   + DL+IAA  E H ++VLHYD D+D+I
Sbjct  61   RGFDWLPTPDEAWDRALEVQTQLIAAGNWKALSVSDLVIAATAERHSVIVLHYDGDYDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            AAVTGQ  +W+VP+GT D
Sbjct  121  AAVTGQSTRWVVPSGTAD  138


>gi|343479040|gb|AEM44209.1| hypothetical protein [uncultured bacterium]
Length=139

 Score =  112 bits (279),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 60/138 (44%), Positives = 86/138 (63%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M  +YL+D S + R ++P+V+  ++PL E   +A  Q T+ E+ +SAR+ +E  R+   L
Sbjct  1    MQDRYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDGSEATRISTWL  60

Query  150  SAFDLIESTASHHRRALGIQR-LLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
             AFD + +      RAL IQR  L A   R   +PDLLIAA  E +   VLHYD DFD+I
Sbjct  61   HAFDYLRTDDDTFIRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDFDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            A++TGQP +W+VP G+ D
Sbjct  121  ASLTGQPTEWVVPPGSAD  138


>gi|302559325|ref|ZP_07311667.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302476943|gb|EFL40036.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=139

 Score =  110 bits (275),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 60/138 (44%), Positives = 84/138 (61%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M   YL+D S + R ++P+V+  ++PL E   +A  Q T+ E+ +SAR+ +E  R+   L
Sbjct  1    MQDHYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEYEMIHSARDSSEATRISTWL  60

Query  150  SAFDLIESTASHHRRALGIQR-LLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
             AFD + +      RAL IQR  L A   R   +PDLLIAA  E H   VLHYD DFD+I
Sbjct  61   HAFDYLRTDDDVFTRALEIQRHALNAGFHRALSLPDLLIAATAELHRRTVLHYDGDFDMI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            A++TGQP +W+V  G+ D
Sbjct  121  ASLTGQPAEWVVAPGSAD  138


>gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302462202|gb|EFL25295.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=138

 Score =  108 bits (270),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 60/138 (44%), Positives = 80/138 (58%), Gaps = 1/138 (0%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            M+ +YL+D S + R +RPAVR  + PL E G +  T   ++E+ YSARN  E  RL   L
Sbjct  1    MSHRYLIDKSALARSARPAVRETLNPLHERGLLCVTGAVEVEILYSARNANEADRLGRWL  60

Query  150  SAFDLIESTASHHRRALGIQRLLAAR-SQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
            + FD +         AL IQR   A+ + R   + DLLIAA  + HG  VLHYD D+D I
Sbjct  61   TGFDYLPCPDEVWDAALDIQRQAIAKGNHRAFSMADLLIAATAQRHGATVLHYDGDYDQI  120

Query  209  AAVTGQPCQWIVPAGTID  226
            AA+TG P +W+   GT D
Sbjct  121  AAITGYPSRWVAEPGTAD  138


>gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kitasatospora setae KM-6054]
Length=139

 Score =  107 bits (266),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 57/135 (43%), Positives = 82/135 (61%), Gaps = 1/135 (0%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAF  152
            ++L+D S + R  +PAVR  ++ L++   +A +   ++EV YSAR   E +RL   L  F
Sbjct  5    RFLIDKSALARWGKPAVRPVLDDLSQRALLAISPTVEMEVLYSARTLAEAERLRHLLRGF  64

Query  153  DLIESTASHHRRALGIQRLLAAR-SQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAV  211
            D +        RA  +Q+    R + R   + DLLIAA  E HG+ VLHYD D+D+IAA+
Sbjct  65   DYLSCPDEVWDRAKQVQQQALFRGNHRALSMADLLIAATAERHGVTVLHYDGDYDMIAAI  124

Query  212  TGQPCQWIVPAGTID  226
            TGQP +W+VPAGT D
Sbjct  125  TGQPARWVVPAGTAD  139


>gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841 [Mycobacterium canettii CIPT 
140010059]
 gi|340005948|emb|CCC45115.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=138

 Score =  106 bits (264),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA  148
            M  +YLLD S   R   PAVR  +EPL E G +AR  ITDLE G SAR+  + + L    
Sbjct  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60

Query  149  LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL  207
              A + + +  +   RA  IQ  L  +   R  KIPDL+IAA  E HG+ V+HYD DF+ 
Sbjct  61   RDALEYVNTPDTVWDRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120

Query  208  IAAVTGQPCQWIVPAGT  224
            IAA+T QP +W+V  GT
Sbjct  121  IAAITRQPVEWVVAPGT  137


>gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycobacterium tuberculosis H37Rv]
 gi|15842295|ref|NP_337332.1| hypothetical protein MT2827 [Mycobacterium tuberculosis CDC1551]
 gi|31793931|ref|NP_856424.1| hypothetical protein Mb2778c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=138

 Score =  105 bits (263),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)

Query  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA  148
            M  +YLLD S   R   PAVR  +EPL E G +AR  ITDLE G SAR+  + + L    
Sbjct  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60

Query  149  LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL  207
              A + + +  +   RA  IQ  L  +   R  KIPDL+IAA  E HG+ V+HYD DF+ 
Sbjct  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120

Query  208  IAAVTGQPCQWIVPAGT  224
            IAA+T QP +W+V  GT
Sbjct  121  IAAITRQPVEWVVAPGT  137


>gi|308378090|ref|ZP_07668665.1| putative type I restriction-modification system, M subunit [Mycobacterium 
tuberculosis SUMu009]
 gi|308353571|gb|EFP42422.1| putative type I restriction-modification system, M subunit [Mycobacterium 
tuberculosis SUMu009]
Length=718

 Score =  103 bits (256),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 81/140 (58%), Gaps = 3/140 (2%)

Query  84   RGPRR-SMALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEW  142
            R PR   M  +YLLD S   R   PAVR  +EPL E G +AR  ITDLE G SAR+  + 
Sbjct  4    RPPREHGMTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDH  63

Query  143  QRL-MVALSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLH  200
            + L      A + + +  +   RA  IQ  L  +   R  KIPDL+IAA  E HG+ V+H
Sbjct  64   RTLGTYRRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMH  123

Query  201  YDADFDLIAAVTGQPCQWIV  220
            YD DF+ IAA+T QP +W+V
Sbjct  124  YDQDFERIAAITRQPVEWVV  143


>gi|315504329|ref|YP_004083216.1| pilt protein domain-containing protein [Micromonospora sp. L5]
 gi|315410948|gb|ADU09065.1| PilT protein domain protein [Micromonospora sp. L5]
Length=139

 Score =  102 bits (254),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 57/135 (43%), Positives = 79/135 (59%), Gaps = 1/135 (0%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAF  152
            +YLLD S + R  +PAV   ++ L++ G +A     ++EV +SAR+  + +R    L  F
Sbjct  5    RYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVVHSARSAKDAKRARWLLRGF  64

Query  153  DLIESTASHHRRALGIQ-RLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAV  211
            D +        RA+ IQ + L   + R   + DLLIAA  E HG+ VLHYD DFDLI A+
Sbjct  65   DWLAMPDDIWDRAIDIQVQALHKGNHRALSMADLLIAATAERHGVTVLHYDGDFDLITAI  124

Query  212  TGQPCQWIVPAGTID  226
            TGQP  W+VPAG  D
Sbjct  125  TGQPTTWVVPAGKAD  139


>gi|302869194|ref|YP_003837831.1| PilT protein domain-containing protein [Micromonospora aurantiaca 
ATCC 27029]
 gi|302572053|gb|ADL48255.1| PilT protein domain protein [Micromonospora aurantiaca ATCC 27029]
Length=139

 Score =  102 bits (253),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 57/135 (43%), Positives = 79/135 (59%), Gaps = 1/135 (0%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAF  152
            +YLLD S + R  +PAV   ++ L++ G +A     ++EV +SAR+  + +R    L  F
Sbjct  5    RYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVIHSARSAKDAKRARWLLRGF  64

Query  153  DLIESTASHHRRALGIQ-RLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAV  211
            D +        RA+ IQ + L   + R   + DLLIAA  E HG+ VLHYD DFDLI A+
Sbjct  65   DWLAMPDDIWDRAIDIQVQTLHKGNHRALSMADLLIAATAERHGVTVLHYDGDFDLITAI  124

Query  212  TGQPCQWIVPAGTID  226
            TGQP  W+VPAG  D
Sbjct  125  TGQPTTWVVPAGKAD  139


>gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302475573|gb|EFL38666.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=136

 Score =  101 bits (251),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 55/136 (41%), Positives = 81/136 (60%), Gaps = 1/136 (0%)

Query  92   LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSA  151
            ++YL+D S + R ++PAVR  ++PL + G +A T   ++E+ YSARN  E  +L   L+ 
Sbjct  1    MRYLIDKSALARRAKPAVRGVLDPLIQRGLLAVTGAVEMEILYSARNPAEAGKLRYWLAG  60

Query  152  FDLIESTASHHRRALGIQ-RLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAA  210
            FD +        RA  +Q +     + R   + DLLIAA  E HG+ VLHYD D++ IA 
Sbjct  61   FDYLPCPDECWDRAKDVQAQATRTGNHRALSMADLLIAATAERHGVRVLHYDEDYEQIAE  120

Query  211  VTGQPCQWIVPAGTID  226
            +TGQ  +W+ PAGT D
Sbjct  121  LTGQAHEWVAPAGTAD  136


>gi|284991226|ref|YP_003409780.1| PilT protein domain-containing protein [Geodermatophilus obscurus 
DSM 43160]
 gi|284064471|gb|ADB75409.1| PilT protein domain protein [Geodermatophilus obscurus DSM 43160]
Length=141

 Score = 94.7 bits (234),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 58/135 (43%), Positives = 80/135 (60%), Gaps = 2/135 (1%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALS-A  151
            +YLLDTS   R+  P V   V PL  AG +A     DLE  YSAR+  E++ +      A
Sbjct  6    RYLLDTSAAARVPAPQVADRVVPLLSAGLLATCAALDLEALYSARSPREYREVRADRRLA  65

Query  152  FDLIESTASHHRRALGIQRLLA-ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAA  210
            ++ + +     +RAL +Q  LA A   RG  + DL+I+A  E H + VLHYD DFD +AA
Sbjct  66   YEYLPTEDGDWQRALQVQAALADAGRWRGVGLADLVISAVAERHRVTVLHYDGDFDGVAA  125

Query  211  VTGQPCQWIVPAGTI  225
            VTGQ  +W+VPAG++
Sbjct  126  VTGQRTEWVVPAGSV  140


>gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197710357|gb|EDY54391.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=139

 Score = 87.8 bits (216),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 60/140 (43%), Positives = 79/140 (57%), Gaps = 8/140 (5%)

Query  91   ALKYLLDTSVIKR-LSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL  149
            A  YL+DTS + R L  PA  R  +PL E G ++R  +T++E  YSARN  +   L+  L
Sbjct  3    ATAYLIDTSALVRILKHPARPRWEKPLEE-GLISRCPMTEVEFLYSARNAEDRSELVQDL  61

Query  150  SAFDLIESTASHHR---RALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADF  205
             A  L   T    R   RA  +QR L  + Q R     DLL+AA  E  GL +LHYD DF
Sbjct  62   DA--LFGWTPLDDRAVSRAWDVQRELTEKGQHRSAGAVDLLVAATAELQGLTMLHYDNDF  119

Query  206  DLIAAVTGQPCQWIVPAGTI  225
            + IA+VTGQP QW+   G++
Sbjct  120  ETIASVTGQPTQWLAAPGSL  139


>gi|297163315|gb|ADI13027.1| PilT protein domain protein [Streptomyces bingchenggensis BCW-1]
Length=140

 Score = 86.7 bits (213),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 59/140 (43%), Positives = 76/140 (55%), Gaps = 3/140 (2%)

Query  90   MALKYLLDTSVIKRLSR-PAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVA  148
            M+  +L+DTS   RL R PAV R    + + G V   +IT+LE+  +     EW  L   
Sbjct  1    MSESFLIDTSACNRLFRTPAVERHWATVLDEGRVTVCEITELELVRATGGRGEWAVLERY  60

Query  149  L-SAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFD  206
            L  AF           RA  +Q LL A S  +G +  DL+ AA  E  GL +LHYDADF+
Sbjct  61   LHDAFGWPPVPDRALTRARHVQDLLVATSWHQGPRAVDLMTAATAELCGLTLLHYDADFE  120

Query  207  LIAAVTGQPCQWIVPAGTID  226
             IA VTGQP QWI P G++D
Sbjct  121  TIAKVTGQPHQWIAPRGSVD  140


>gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302464447|gb|EFL27540.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=140

 Score = 84.0 bits (206),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 61/140 (44%), Positives = 75/140 (54%), Gaps = 3/140 (2%)

Query  90   MALKYLLDTSVIKRLSR-PAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVA  148
            M+  YL+DTS   RL R PAV R    + + G VA  +IT+LE+  +     E   L   
Sbjct  1    MSESYLIDTSACNRLFRSPAVERHWAGILDEGRVAVCEITELELVRATGGRDERAVLERY  60

Query  149  L-SAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFD  206
            L  AF           RA  +Q LL A S  +G    DL+ AA  E  GL +LHYDADF+
Sbjct  61   LHDAFGWTPVPDRALTRARQVQDLLVATSWHQGPGAVDLMTAATAELCGLTLLHYDADFE  120

Query  207  LIAAVTGQPCQWIVPAGTID  226
             IA VTGQP QWI P G+ID
Sbjct  121  TIAKVTGQPHQWIAPRGSID  140


>gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_26442 [Mycobacterium kansasii ATCC 
12478]
Length=140

 Score = 83.6 bits (205),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 54/140 (39%), Positives = 79/140 (57%), Gaps = 4/140 (2%)

Query  90   MAL--KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMV  147
            MAL  ++L+DTS   R++ P V   + PL EAG VA T   D E  YSARN  ++++L  
Sbjct  1    MALIARHLIDTSAAARMTHPEVAARLAPLIEAGLVATTAQLDAEALYSARNPADYEQLWS  60

Query  148  A-LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADF  205
               +A++ + +   H + ALG QR LA+    R   + DLLIA     H + ++HYDADF
Sbjct  61   DRRAAYEYLPTNDEHWQTALGAQRKLASTGRHRAVGMADLLIATLAAAHDMTLIHYDADF  120

Query  206  DLIAAVTGQPCQWIVPAGTI  225
            ++ A V     QW++   TI
Sbjct  121  EIAAEVLPFRHQWVLERDTI  140


>gi|15842082|ref|NP_337119.1| hypothetical protein MT2622 [Mycobacterium tuberculosis CDC1551]
 gi|254551596|ref|ZP_05142043.1| hypothetical protein Mtube_14247 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289746329|ref|ZP_06505707.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 7 more sequence titles
 Length=138

 Score = 82.0 bits (201),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 70/137 (52%), Gaps = 3/137 (2%)

Query  92   LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSA  151
            + + +DTS     +RP V R       A  +       LE+ YSA + T++  L   L  
Sbjct  2    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  61

Query  152  FDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
               I   A    RA  +QR LA       R  KI DL+IAAA E  G +V HYD ++D +
Sbjct  62   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  121

Query  209  AAVTGQPCQWIVPAGTI  225
            AA+TGQP +WIVP GT+
Sbjct  122  AAITGQPTEWIVPRGTL  138


>gi|306780585|ref|ZP_07418922.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|306785348|ref|ZP_07423670.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|306789947|ref|ZP_07428269.1| toxin [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=137

 Score = 82.0 bits (201),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 70/137 (52%), Gaps = 3/137 (2%)

Query  92   LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSA  151
            + + +DTS     +RP V R       A  +       LE+ YSA + T++  L   L  
Sbjct  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60

Query  152  FDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
               I   A    RA  +QR LA       R  KI DL+IAAA E  G +V HYD ++D +
Sbjct  61   LARIPVGAKTFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120

Query  209  AAVTGQPCQWIVPAGTI  225
            AA+TGQP +WIVP GT+
Sbjct  121  AAITGQPTEWIVPRGTL  137


>gi|15609683|ref|NP_217062.1| hypothetical protein Rv2546 [Mycobacterium tuberculosis H37Rv]
 gi|31793729|ref|NP_856222.1| hypothetical protein Mb2576 [Mycobacterium bovis AF2122/97]
 gi|121638431|ref|YP_978655.1| hypothetical protein BCG_2569 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 55 more sequence titles
 Length=137

 Score = 82.0 bits (201),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 70/137 (52%), Gaps = 3/137 (2%)

Query  92   LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSA  151
            + + +DTS     +RP V R       A  +       LE+ YSA + T++  L   L  
Sbjct  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60

Query  152  FDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
               I   A    RA  +QR LA       R  KI DL+IAAA E  G +V HYD ++D +
Sbjct  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120

Query  209  AAVTGQPCQWIVPAGTI  225
            AA+TGQP +WIVP GT+
Sbjct  121  AAITGQPTEWIVPRGTL  137


>gi|167968845|ref|ZP_02551122.1| hypothetical protein MtubH3_12760 [Mycobacterium tuberculosis 
H37Ra]
Length=136

 Score = 81.6 bits (200),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 52/135 (39%), Positives = 69/135 (52%), Gaps = 3/135 (2%)

Query  94   YLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFD  153
            + +DTS     +RP V R       A  +       LE+ YSA + T++  L   L    
Sbjct  2    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  61

Query  154  LIESTASHHRRALGIQRLLA---ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAA  210
             I   A    RA  +QR LA       R  KI DL+IAAA E  G +V HYD ++D +AA
Sbjct  62   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  121

Query  211  VTGQPCQWIVPAGTI  225
            +TGQP +WIVP GT+
Sbjct  122  ITGQPTEWIVPRGTL  136


>gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces sp. C]
 gi|302443399|gb|EFL15215.1| predicted protein [Streptomyces sp. C]
Length=140

 Score = 77.8 bits (190),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 76/137 (56%), Gaps = 7/137 (5%)

Query  92   LKYLLDTS-VIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSAR---NETEWQRLMV  147
            + YL+DTS V++ L+   VR+A       G +   ++T+LE+ +SA+   +  E + L+ 
Sbjct  4    VTYLIDTSAVVRVLTNEDVRKAWRDHLAEGVIGICEVTELEILFSAKSLADRLEKEALLG  63

Query  148  ALSAFDLIESTASHHRRALGIQRLLAARSQRGRKIP-DLLIAAAGEEHGLVVLHYDADFD  206
             L  F+      S + RA  +QRLL  R +     P DLL+AA  E  GL +LHYD DFD
Sbjct  64   EL--FNWTPVPESVYVRARAVQRLLTGRGEHRSAGPVDLLVAATAELTGLTLLHYDKDFD  121

Query  207  LIAAVTGQPCQWIVPAG  223
             IA  TGQP +W+   G
Sbjct  122  AIARATGQPTRWVARPG  138


>gi|339295424|gb|AEJ47535.1| hypothetical protein CCDC5079_2345 [Mycobacterium tuberculosis 
CCDC5079]
Length=112

 Score = 76.6 bits (187),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 44/99 (45%), Positives = 57/99 (58%), Gaps = 3/99 (3%)

Query  130  LEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLL  186
            LE+ YSA + T++  L   L     I   A    RA  +QR LA       R  KI DL+
Sbjct  14   LEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLV  73

Query  187  IAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTI  225
            IAAA E  G +V HYD ++D +AA+TGQP +WIVP GT+
Sbjct  74   IAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL  112


>gi|158318849|ref|YP_001511357.1| PilT domain-containing protein [Frankia sp. EAN1pec]
 gi|158114254|gb|ABW16451.1| PilT protein domain protein [Frankia sp. EAN1pec]
Length=159

 Score = 75.5 bits (184),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 48/101 (48%), Positives = 64/101 (64%), Gaps = 3/101 (2%)

Query  120  GAVARTQITDLEVGYSARNETEWQ-RLMVAL-SAFDLIESTASHHRRALGIQRLLAARSQ  177
            G +  T +T LEVG+SAR+  + + RL  +L SA  +  +T     RA+ IQ LLA+   
Sbjct  54   GLIRITTVTILEVGFSARSAQDLRVRLRRSLVSAMPVENTTPRIEARAVEIQELLASTGH  113

Query  178  -RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQ  217
             R   +PDL+IAA  E  GLVVLH D DF+LIAA+TGQP +
Sbjct  114  HRAPSVPDLIIAATAELAGLVVLHVDKDFELIAALTGQPTE  154


>gi|326331752|ref|ZP_08198040.1| toxin-antitoxin system, toxin component, PIN family [Nocardioidaceae 
bacterium Broad-1]
 gi|325950551|gb|EGD42603.1| toxin-antitoxin system, toxin component, PIN family [Nocardioidaceae 
bacterium Broad-1]
Length=137

 Score = 74.3 bits (181),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 48/105 (46%), Positives = 56/105 (54%), Gaps = 3/105 (2%)

Query  116  LAEAGAVARTQITDLEVGYSARNETEWQRLM--VALSAFDLIESTASHHRRALGIQRL-L  172
            L E G V  T  T LE+G+ AR+E EW  L+  V +    L   T     RAL IQRL L
Sbjct  29   LIELGQVRITTTTLLEIGHLARSEQEWSELVEDVPVVHMPLATLTPRTEARALEIQRLVL  88

Query  173  AARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQ  217
                 R   +PDLL+AA  EE  L VLH D D DLI   TGQP +
Sbjct  89   RGGRHRAPSVPDLLVAAVAEEADLTVLHADNDVDLITRTTGQPVE  133


>gi|229598010|pdb|3H87|A Chain A, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium 
Tuberculosis
 gi|229598011|pdb|3H87|B Chain B, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium 
Tuberculosis
Length=156

 Score = 73.9 bits (180),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 55/128 (43%), Positives = 67/128 (53%), Gaps = 3/128 (2%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALS  150
            ++L+D S + RL+            E G V  T +T LEVG+SA      +R      LS
Sbjct  20   RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS  79

Query  151  AFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA  209
            A  +   T     RAL +Q LLA R   RG  IPDLLIAA  E  GL VLH D DFD IA
Sbjct  80   AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA  139

Query  210  AVTGQPCQ  217
            A+TGQ  +
Sbjct  140  ALTGQKTE  147


>gi|289748072|ref|ZP_06507450.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308369360|ref|ZP_07417480.2| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308372857|ref|ZP_07430154.2| toxin [Mycobacterium tuberculosis SUMu005]
 11 more sequence titles
 Length=143

 Score = 73.6 bits (179),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 55/128 (43%), Positives = 67/128 (53%), Gaps = 3/128 (2%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALS  150
            ++L+D S + RL+            E G V  T +T LEVG+SA      +R      LS
Sbjct  7    RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS  66

Query  151  AFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA  209
            A  +   T     RAL +Q LLA R   RG  IPDLLIAA  E  GL VLH D DFD IA
Sbjct  67   AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA  126

Query  210  AVTGQPCQ  217
            A+TGQ  +
Sbjct  127  ALTGQKTE  134


>gi|15607442|ref|NP_214815.1| hypothetical protein Rv0301 [Mycobacterium tuberculosis H37Rv]
 gi|15839686|ref|NP_334723.1| hypothetical protein MT0314 [Mycobacterium tuberculosis CDC1551]
 gi|31791480|ref|NP_853973.1| hypothetical protein Mb0309 [Mycobacterium bovis AF2122/97]
 65 more sequence titles
 Length=141

 Score = 73.6 bits (179),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 55/128 (43%), Positives = 67/128 (53%), Gaps = 3/128 (2%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALS  150
            ++L+D S + RL+            E G V  T +T LEVG+SA      +R      LS
Sbjct  5    RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS  64

Query  151  AFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA  209
            A  +   T     RAL +Q LLA R   RG  IPDLLIAA  E  GL VLH D DFD IA
Sbjct  65   AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA  124

Query  210  AVTGQPCQ  217
            A+TGQ  +
Sbjct  125  ALTGQKTE  132


>gi|336119997|ref|YP_004574775.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
 gi|334687787|dbj|BAK37372.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
Length=139

 Score = 73.2 bits (178),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 50/103 (49%), Positives = 61/103 (60%), Gaps = 7/103 (6%)

Query  120  GAVARTQITDLEVGYSARNETE----WQRLMVALSAFDLIESTASHHRRALGIQRLLAAR  175
            G V  + IT LE+GYSAR   +    ++R  V+L   + I  T +   RA  +Q LLA R
Sbjct  34   GLVRISPITRLELGYSARTGVDGREGFRRPPVSLMPVERI--TPAIEDRAEEVQMLLADR  91

Query  176  SQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQ  217
             Q R   IPDLLIAA  E+ GL VL  D DFDLIA VTGQP +
Sbjct  92   GQHRAPSIPDLLIAATAEKAGLTVLAVDKDFDLIAEVTGQPVE  134


>gi|336117846|ref|YP_004572614.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
 gi|334685626|dbj|BAK35211.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
Length=139

 Score = 72.0 bits (175),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 47/127 (38%), Positives = 66/127 (52%), Gaps = 3/127 (2%)

Query  94   YLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALSA  151
            +L+D S + RL     +       + G V  T +T  E+G+S  +  +W RL     L+ 
Sbjct  7    WLIDKSALVRLPASPDQATWLNRIQRGLVTVTPLTMAELGFSTMSADDWTRLQHGPPLAL  66

Query  152  FDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAA  210
              LI  +     RAL +Q LLA R + R   + DL IAA  E+ GL +LH D DFDLI+ 
Sbjct  67   MPLIGISPRAESRALEVQGLLAGRGRHRAVGVADLFIAAVAEDSGLTLLHVDKDFDLISE  126

Query  211  VTGQPCQ  217
            VT QP +
Sbjct  127  VTNQPVE  133


>gi|339630376|ref|YP_004722018.1| hypothetical protein MAF_03030 [Mycobacterium africanum GM041182]
 gi|339329732|emb|CCC25375.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=141

 Score = 71.6 bits (174),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 54/128 (43%), Positives = 66/128 (52%), Gaps = 3/128 (2%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALS  150
            ++L+D S + RL+            E G V  T +T LEVG+SA      +R      LS
Sbjct  5    RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS  64

Query  151  AFDLIESTASHHRRALGIQRLLAARSQR-GRKIPDLLIAAAGEEHGLVVLHYDADFDLIA  209
            A  +   T     RAL +Q LLA R    G  IPDLLIAA  E  GL VLH D DFD IA
Sbjct  65   AMPVEYLTPRIEDRALEVQTLLADRGHHHGPSIPDLLIAATAELSGLTVLHVDKDFDAIA  124

Query  210  AVTGQPCQ  217
            A+TGQ  +
Sbjct  125  ALTGQKTE  132


>gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291355304|gb|EFE82206.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=135

 Score = 71.2 bits (173),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 48/128 (38%), Positives = 70/128 (55%), Gaps = 1/128 (0%)

Query  93   KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAF  152
             YL+DTS + R+ +  V R  E    AG V+   +T+LE+ YSAR+ ++   +   LS F
Sbjct  5    DYLIDTSALVRVLQRRVPREWEHRIGAGLVSLCDLTELELLYSARSTSDRDAIRDRLSLF  64

Query  153  DLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAV  211
                      RRA  +Q LL  + + R     DLL+AA  E+ GL +LH+D DF+ +A  
Sbjct  65   TWCPMPDGVFRRARTVQALLTDKGEHRSAGAVDLLLAATAEQSGLTLLHHDRDFETVARA  124

Query  212  TGQPCQWI  219
            TGQP + I
Sbjct  125  TGQPVRMI  132


>gi|315446124|ref|YP_004079003.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
 gi|315264427|gb|ADU01169.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
Length=137

 Score = 70.5 bits (171),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 56/134 (42%), Positives = 73/134 (55%), Gaps = 8/134 (5%)

Query  90   MALK-YLLDTSVIKRLS-RPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMV  147
            MAL+ +L+D S   RL+  P V   +E + + G V  + +T LE+GYS R   +  R  V
Sbjct  1    MALRPWLIDKSAYTRLAVSPDVELWMERI-DRGLVRISTVTRLEIGYSFRTAAQ-ARSEV  58

Query  148  ALSAFDLIE---STASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDA  203
            A     L+     T +   RA  IQ  LA R   R   IPDLL+AA  E+ GL VLH   
Sbjct  59   ASPPLTLMPIEYMTPTVEDRAREIQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHK  118

Query  204  DFDLIAAVTGQPCQ  217
            DFDLIA +TGQP +
Sbjct  119  DFDLIAGITGQPVE  132


>gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_14659 [Streptomyces roseosporus NRRL 
11379]
 gi|291445528|ref|ZP_06584918.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
 gi|291348475|gb|EFE75379.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
Length=135

 Score = 70.5 bits (171),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 47/126 (38%), Positives = 70/126 (56%), Gaps = 7/126 (5%)

Query  94   YLLDTSVIKRLSRPAVRRAVEPLA---EAGAVARTQITDLEVGYSARNETEWQRLMVALS  150
            YL+DTS + R+    +R++ E       AG VA   +T+LE+ YSAR+  + +++   L+
Sbjct  6    YLIDTSALARI---LLRQSTEDWTRRISAGLVALCDLTELELLYSARSTEDREKVRERLA  62

Query  151  AFDLIESTASHHRRALGIQRLLAARSQRGRKIP-DLLIAAAGEEHGLVVLHYDADFDLIA  209
             +          RRA  +Q  L A+ +     P DLL+AA  E+ GL +LHYD DF+ IA
Sbjct  63   LYTWCPMPDGVFRRARTVQDQLTAKGEHRNAGPVDLLLAATAEQSGLTLLHYDRDFETIA  122

Query  210  AVTGQP  215
              TGQP
Sbjct  123  RTTGQP  128


>gi|145225766|ref|YP_001136444.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|145218252|gb|ABP47656.1| PilT protein domain protein [Mycobacterium gilvum PYR-GCK]
Length=137

 Score = 69.7 bits (169),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 56/134 (42%), Positives = 72/134 (54%), Gaps = 8/134 (5%)

Query  90   MALK-YLLDTSVIKRLS-RPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMV  147
            MAL+ +L+D S   RL+  P V   +E + + G V  + +T LE+GYS R   E  R  V
Sbjct  1    MALRPWLIDKSAYTRLAVSPDVELWMERI-DRGLVRISTVTRLEIGYSFRT-AEQARSEV  58

Query  148  ALSAFDLIE---STASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDA  203
            A     L+     T +   RA  +Q  LA R   R   IPDLL+AA  E+ GL VLH   
Sbjct  59   ASPPLTLMPIEYMTPTVEDRAREVQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHK  118

Query  204  DFDLIAAVTGQPCQ  217
            DFDLIA  TGQP +
Sbjct  119  DFDLIAGTTGQPVE  132


>gi|269124363|ref|YP_003297733.1| PilT protein domain-containing protein [Thermomonospora curvata 
DSM 43183]
 gi|268309321|gb|ACY95695.1| PilT protein domain protein [Thermomonospora curvata DSM 43183]
Length=136

 Score = 68.6 bits (166),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 52/125 (42%), Positives = 72/125 (58%), Gaps = 3/125 (2%)

Query  94   YLLDTSVIKRLS-RPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVAL-SA  151
            +L DTS   RL   PA+ R  E    AG V+   +T++E+ YSAR+  +++R+   L   
Sbjct  6    FLADTSAFHRLDGIPAIARNWEDQLRAGLVSVCPVTEIEIFYSARSSRDYERVSARLREV  65

Query  152  FDLIESTASHHRRALGIQR-LLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAA  210
            F  +       +RAL +Q  +LA  + R   + DLL+AA  EE+ L VLH D DFD IAA
Sbjct  66   FGWVPVPERAFQRALEVQEAMLAQGTHRSAGLADLLLAATAEEYRLTVLHDDKDFDCIAA  125

Query  211  VTGQP  215
            VTGQP
Sbjct  126  VTGQP  130


>gi|315441643|ref|YP_004074520.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
 gi|315265298|gb|ADU02039.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
Length=134

 Score = 68.6 bits (166),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 71/129 (56%), Gaps = 5/129 (3%)

Query  93   KYLLDTSVIKRL-SRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVA--L  149
             +L+D S   +L + P  +  VE + E G V  + +T L++GYS RN ++ +    A  L
Sbjct  3    NWLIDKSAYTQLVASPDAQAWVERI-ERGLVRMSTVTRLQIGYSFRNGSQARSESGAPPL  61

Query  150  SAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
            +   L   T +   RA+G+Q  LA R   R   IPDLL+AA  E  GL VL  D DFDLI
Sbjct  62   ALMPLEYLTPAAEDRAVGVQLQLADRGLHRAPAIPDLLVAAVAEMAGLTVLALDTDFDLI  121

Query  209  AAVTGQPCQ  217
            A VTGQ  +
Sbjct  122  AQVTGQAVE  130


>gi|284034116|ref|YP_003384047.1| PilT protein domain-containing protein [Kribbella flavida DSM 
17836]
 gi|283813409|gb|ADB35248.1| PilT protein domain protein [Kribbella flavida DSM 17836]
Length=137

 Score = 68.2 bits (165),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 54/129 (42%), Positives = 76/129 (59%), Gaps = 7/129 (5%)

Query  94   YLLDTSVIKRLSR-PAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMV---AL  149
            +L+D S + RL   P + +    + + G V  T +T LEVG+S R+  E  R+ +    L
Sbjct  6    WLIDKSALVRLGDGPQIDQWANRI-DRGLVHITPVTLLEVGFSTRSAEE-HRMTLQFPPL  63

Query  150  SAFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
            S+  ++ ST +   RA+ +Q LLAA  Q R   +PDLLIAA  E  GL VLH D DF+LI
Sbjct  64   SSMPVVNSTPAIESRAVAVQALLAATGQHRAPSVPDLLIAATAELAGLTVLHLDEDFELI  123

Query  209  AAVTGQPCQ  217
            A +TGQP +
Sbjct  124  AGITGQPVE  132


>gi|119854953|ref|YP_935558.1| PilT domain-containing protein [Mycobacterium sp. KMS]
 gi|119697671|gb|ABL94743.1| PilT protein domain protein [Mycobacterium sp. KMS]
Length=136

 Score = 67.4 bits (163),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 70/129 (55%), Gaps = 5/129 (3%)

Query  93   KYLLDTSVIKRL-SRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVA--L  149
             +L+D S   +L + P  +  VE + E G V  + +T L++GYS RN  + +    A  L
Sbjct  5    NWLIDKSAYTQLVASPDAQAWVERI-ERGLVRMSTVTRLQIGYSFRNGPQARSESGAPPL  63

Query  150  SAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208
            +   L   T +   RA+G+Q  LA R   R   IPDLL+AA  E  GL VL  D DFDLI
Sbjct  64   ALMPLEYLTPAAEDRAVGVQLQLADRGLHRAPAIPDLLVAAVAEMAGLTVLALDTDFDLI  123

Query  209  AAVTGQPCQ  217
            A VTGQ  +
Sbjct  124  AQVTGQAVE  132



Lambda     K      H
   0.323    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 287912302678




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40