BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0231

Length=568
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607372|ref|NP_214745.1|  acyl-CoA dehydrogenase FADE4 [Mycob...  1175    0.0   
gi|340625268|ref|YP_004743720.1|  putative acyl-CoA dehydrogenase...  1173    0.0   
gi|306970423|ref|ZP_07483084.1|  acyl-CoA dehydrogenase fadE4 [My...  1173    0.0   
gi|240168450|ref|ZP_04747109.1|  acyl-CoA dehydrogenase FadE4 [My...  1050    0.0   
gi|296167461|ref|ZP_06849860.1|  probable acyl-CoA dehydrogenase ...  1021    0.0   
gi|342859302|ref|ZP_08715956.1|  acyl-CoA dehydrogenase FadE4 [My...  1019    0.0   
gi|183980516|ref|YP_001848807.1|  acyl-CoA dehydrogenase FadE4 [M...  1014    0.0   
gi|254823270|ref|ZP_05228271.1|  FadE4 [Mycobacterium intracellul...  1013    0.0   
gi|118616869|ref|YP_905201.1|  acyl-CoA dehydrogenase FadE4 [Myco...  1012    0.0   
gi|118463316|ref|YP_884060.1|  acyl-CoA dehydrogenase [Mycobacter...  1000    0.0   
gi|41409767|ref|NP_962603.1|  FadE4 [Mycobacterium avium subsp. p...   998    0.0   
gi|289552483|ref|ZP_06441693.1|  acyl-CoA dehydrogenase fadE4 [My...   964    0.0   
gi|225181507|ref|ZP_03734949.1|  acyl-CoA dehydrogenase domain pr...   681    0.0   
gi|89898884|ref|YP_521355.1|  acyl-CoA dehydrogenase-like protein...   662    0.0   
gi|302342935|ref|YP_003807464.1|  acyl-CoA dehydrogenase domain p...   662    0.0   
gi|239985971|ref|ZP_04706635.1|  putative acyl-CoA dehydrogenase ...   651    0.0   
gi|224369802|ref|YP_002603966.1|  Acd9 [Desulfobacterium autotrop...   650    0.0   
gi|145221002|ref|YP_001131680.1|  acyl-CoA dehydrogenase domain-c...   645    0.0   
gi|256391314|ref|YP_003112878.1|  acyl-CoA dehydrogenase domain-c...   642    0.0   
gi|182440246|ref|YP_001827965.1|  putative acyl-CoA dehydrogenase...   640    0.0   
gi|326780909|ref|ZP_08240174.1|  acyl-CoA dehydrogenase domain-co...   639    0.0   
gi|302524818|ref|ZP_07277160.1|  acyl-CoA dehydrogenase [Streptom...   639    0.0   
gi|297204686|ref|ZP_06922083.1|  acyl-CoA dehydrogenase [Streptom...   635    4e-180
gi|120401307|ref|YP_951136.1|  acyl-CoA dehydrogenase domain-cont...   635    7e-180
gi|302532444|ref|ZP_07284786.1|  acyl-CoA dehydrogenase [Streptom...   634    1e-179
gi|226303907|ref|YP_002763865.1|  hypothetical protein RER_04180 ...   634    2e-179
gi|226306105|ref|YP_002766065.1|  hypothetical protein RER_26180 ...   633    3e-179
gi|302556388|ref|ZP_07308730.1|  acyl-CoA dehydrogenase [Streptom...   632    5e-179
gi|254384324|ref|ZP_04999667.1|  acyl-CoA dehydrogenase [Streptom...   630    3e-178
gi|229491413|ref|ZP_04385237.1|  acyl-CoA dehydrogenase [Rhodococ...   629    5e-178
gi|344998079|ref|YP_004800933.1|  acyl-CoA dehydrogenase domain-c...   629    6e-178
gi|126347702|emb|CAJ89417.1|  putative acyl-coA dehydrogenase [St...   628    1e-177
gi|300783471|ref|YP_003763762.1|  acyl-CoA dehydrogenase [Amycola...   626    3e-177
gi|226366074|ref|YP_002783857.1|  acyl-CoA dehydrogenase [Rhodoco...   624    1e-176
gi|111023588|ref|YP_706560.1|  acyl-CoA dehydrogenase [Rhodococcu...   624    2e-176
gi|157376479|ref|YP_001475079.1|  acyl-CoA dehydrogenase-like pro...   622    5e-176
gi|320012359|gb|ADW07209.1|  acyl-CoA dehydrogenase domain-contai...   620    2e-175
gi|229492136|ref|ZP_04385945.1|  acyl-CoA dehydrogenase [Rhodococ...   620    2e-175
gi|45658392|ref|YP_002478.1|  acyl-CoA dehydrogenase [Leptospira ...   617    1e-174
gi|328880568|emb|CCA53807.1|  acyl-CoA dehydrogenase [Streptomyce...   617    2e-174
gi|312139305|ref|YP_004006641.1|  acyl-CoA dehydrogenase [Rhodoco...   617    2e-174
gi|296140378|ref|YP_003647621.1|  acyl-CoA dehydrogenase domain-c...   615    7e-174
gi|24213830|ref|NP_711311.1|  acyl-CoA dehydrogenase [Leptospira ...   615    8e-174
gi|325673389|ref|ZP_08153080.1|  acyl-CoA dehydrogenase [Rhodococ...   614    1e-173
gi|11498109|ref|NP_069334.1|  acyl-CoA dehydrogenase [Archaeoglob...   611    9e-173
gi|289748000|ref|ZP_06507378.1|  acyl-CoA dehydrogenase fadE4 [My...   610    3e-172
gi|256375187|ref|YP_003098847.1|  acyl-CoA dehydrogenase domain-c...   605    6e-171
gi|333920713|ref|YP_004494294.1|  hypothetical protein AS9A_3047 ...   605    6e-171
gi|262202500|ref|YP_003273708.1|  acyl-CoA dehydrogenase domain-c...   595    6e-168
gi|269103330|ref|ZP_06156027.1|  acyl-CoA dehydrogenase [Photobac...   592    5e-167


>gi|15607372|ref|NP_214745.1| acyl-CoA dehydrogenase FADE4 [Mycobacterium tuberculosis H37Rv]
 gi|15839611|ref|NP_334648.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis 
CDC1551]
 gi|31791408|ref|NP_853901.1| acyl-CoA dehydrogenase FADE4 [Mycobacterium bovis AF2122/97]
 63 more sequence titles
 Length=568

 Score = 1175 bits (3040),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 568/568 (100%), Positives = 568/568 (100%), Gaps = 0/568 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA
Sbjct  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA
Sbjct  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK
Sbjct  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA
Sbjct  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA
Sbjct  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE
Sbjct  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
            TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG
Sbjct  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF
Sbjct  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR
Sbjct  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540

Query  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RPVHDPARYDQIWKDHVLALNGAYQMAP
Sbjct  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568


>gi|340625268|ref|YP_004743720.1| putative acyl-CoA dehydrogenase FADE4 [Mycobacterium canettii 
CIPT 140010059]
 gi|340003458|emb|CCC42578.1| putative acyl-CoA dehydrogenase FADE4 [Mycobacterium canettii 
CIPT 140010059]
Length=568

 Score = 1173 bits (3034),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 567/568 (99%), Positives = 567/568 (99%), Gaps = 0/568 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA
Sbjct  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA
Sbjct  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK
Sbjct  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA
Sbjct  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA
Sbjct  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE
Sbjct  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
            TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG
Sbjct  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF
Sbjct  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELH RSATTAEQARFAMRMVR
Sbjct  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHDRSATTAEQARFAMRMVR  540

Query  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RPVHDPARYDQIWKDHVLALNGAYQMAP
Sbjct  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568


>gi|306970423|ref|ZP_07483084.1| acyl-CoA dehydrogenase fadE4 [Mycobacterium tuberculosis SUMu009]
 gi|308352107|gb|EFP40958.1| acyl-CoA dehydrogenase fadE4 [Mycobacterium tuberculosis SUMu009]
Length=568

 Score = 1173 bits (3034),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 567/568 (99%), Positives = 567/568 (99%), Gaps = 0/568 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA
Sbjct  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA
Sbjct  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK
Sbjct  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA
Sbjct  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA
Sbjct  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            MKLVASRASDYMRSA AADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE
Sbjct  301  MKLVASRASDYMRSAPAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
            TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG
Sbjct  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF
Sbjct  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR
Sbjct  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540

Query  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RPVHDPARYDQIWKDHVLALNGAYQMAP
Sbjct  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568


>gi|240168450|ref|ZP_04747109.1| acyl-CoA dehydrogenase FadE4 [Mycobacterium kansasii ATCC 12478]
Length=568

 Score = 1050 bits (2714),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 500/568 (89%), Positives = 531/568 (94%), Gaps = 0/568 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPN L RKYPD+RS EIM ATVDFFESRGKARLKHDDHER+WYSDFLD +GRERIFA
Sbjct  1    MLLNPNRLQRKYPDQRSAEIMQATVDFFESRGKARLKHDDHERVWYSDFLDHIGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP+ YGADDCRWDTYRISEFAEI+GFYGLSYWYPFQVTALGLGPIWMS NEDAKRKA
Sbjct  61   SLLTPSEYGADDCRWDTYRISEFAEIIGFYGLSYWYPFQVTALGLGPIWMSDNEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AA LE GEVFAFGLSEQ HGADVYQTDMILTPS+ GW ANGEKYYIGNANVARMVSTFGK
Sbjct  121  AAQLEQGEVFAFGLSEQAHGADVYQTDMILTPSEHGWVANGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            I  +  + EYVFF ADSQH+RY+L KNVVNSQNYVANYAL DYPVTEAD+LHRG  AFHA
Sbjct  181  IDDSSGNPEYVFFAADSQHDRYELKKNVVNSQNYVANYALHDYPVTEADLLHRGMGAFHA  240

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNTVNVCKYNLGWGA+GMCTHA+YE++THAANRHLYGTVVTDFSHVRRLLTDAY RL+A
Sbjct  241  ALNTVNVCKYNLGWGAVGMCTHAMYEAITHAANRHLYGTVVTDFSHVRRLLTDAYARLVA  300

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            M+LVA+RASDYMRSASA DRRYLLYSPLTKAKVTSEGERVI ALWDVIAAKGVEKDTFFE
Sbjct  301  MRLVATRASDYMRSASADDRRYLLYSPLTKAKVTSEGERVIIALWDVIAAKGVEKDTFFE  360

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
            TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPD+ LP+I RRDDAADD FLF QGPTG
Sbjct  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDAALPLISRRDDAADDTFLFNQGPTG  420

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GLGKVRFH+WRASFD+ AHLPNVALLREQVDV AE+LASATPDAAQQKDIDFAFGVGQLF
Sbjct  421  GLGKVRFHNWRASFDSYAHLPNVALLREQVDVLAEMLASATPDAAQQKDIDFAFGVGQLF  480

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            A VPYAQLILEEA LSGVDEALIDEIFG+LVRDFN++AVELH +SATT EQARFAMRM+R
Sbjct  481  ATVPYAQLILEEAPLSGVDEALIDEIFGLLVRDFNSYAVELHDKSATTDEQARFAMRMIR  540

Query  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RPVHDPARYD+IWK+HVL LNGAY+M P
Sbjct  541  RPVHDPARYDRIWKEHVLPLNGAYEMRP  568


>gi|296167461|ref|ZP_06849860.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897209|gb|EFG76816.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=568

 Score = 1021 bits (2640),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 492/571 (87%), Positives = 524/571 (92%), Gaps = 6/571 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLL+PNHL R+YPDRRSGEIMAATVDFFESRGKARLK DDHER+WYS+FLD +GRERIFA
Sbjct  1    MLLDPNHLQRRYPDRRSGEIMAATVDFFESRGKARLKSDDHERVWYSEFLDHIGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP+ YGADDCRWDTYRISEFAEI+GFYGLSYWYPFQVTALGLGPIWMS N DAKRKA
Sbjct  61   SLLTPSEYGADDCRWDTYRISEFAEIVGFYGLSYWYPFQVTALGLGPIWMSDNTDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS---DGGWTANGEKYYIGNANVARMVST  177
            AA LEAGEVFAFGLSEQTHGADVYQTDMILTPS   + GWTANGEKYYIGNANVARMVST
Sbjct  121  AAQLEAGEVFAFGLSEQTHGADVYQTDMILTPSKDSEHGWTANGEKYYIGNANVARMVST  180

Query  178  FGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEA  237
            FGKIAG   S EY+FF ADSQH+RYDLIKNVVNSQNYVANYALRDYPVTEADILHRG  A
Sbjct  181  FGKIAG---SDEYIFFAADSQHDRYDLIKNVVNSQNYVANYALRDYPVTEADILHRGPGA  237

Query  238  FHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVR  297
            FHAALNTVNVCKYNLGWGA+GMCTHA+YE+VTHA+NR LYGTVVTDFSHVRRLLTDAY+R
Sbjct  238  FHAALNTVNVCKYNLGWGAVGMCTHAMYEAVTHASNRVLYGTVVTDFSHVRRLLTDAYLR  297

Query  298  LIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDT  357
            L+AM+LV +RA DYMRSASA DRRYLLYSPLTKAKVTSEGERV+ ALWDVIAAKGVEKDT
Sbjct  298  LVAMRLVCTRACDYMRSASAGDRRYLLYSPLTKAKVTSEGERVVIALWDVIAAKGVEKDT  357

Query  358  FFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQG  417
            FFE VAREIGLLPRLEGTVHINIGLL KFMPN+LFAP+S LPVI RRDDAADDAFLFAQG
Sbjct  358  FFEAVAREIGLLPRLEGTVHINIGLLAKFMPNFLFAPNSELPVIGRRDDAADDAFLFAQG  417

Query  418  PTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVG  477
            PTGGLGKVRFHDWRA FD  AHLPNVALLR Q+DV A++LA ATPDAAQQKD+DFAF VG
Sbjct  418  PTGGLGKVRFHDWRAPFDAFAHLPNVALLRNQIDVLADMLAGATPDAAQQKDVDFAFAVG  477

Query  478  QLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMR  537
            QLFA VPYAQLILEEA LS VDE LID IF VLVRDFN +AVEL+ + ATT EQARFAMR
Sbjct  478  QLFATVPYAQLILEEALLSDVDETLIDGIFAVLVRDFNGYAVELNDKPATTDEQARFAMR  537

Query  538  MVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            M+RRPVHDP+RY QIWK+H+L LNGAYQM P
Sbjct  538  MIRRPVHDPSRYAQIWKEHILPLNGAYQMRP  568


>gi|342859302|ref|ZP_08715956.1| acyl-CoA dehydrogenase FadE4 [Mycobacterium colombiense CECT 
3035]
 gi|342133543|gb|EGT86746.1| acyl-CoA dehydrogenase FadE4 [Mycobacterium colombiense CECT 
3035]
Length=565

 Score = 1019 bits (2634),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/568 (86%), Positives = 520/568 (92%), Gaps = 3/568 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHL R+YPDRRS EIMAATVDFFESRGKARLK DDHER+WYS+FLD VGRERIFA
Sbjct  1    MLLNPNHLQRQYPDRRSAEIMAATVDFFESRGKARLKADDHERVWYSEFLDHVGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP+ YGADDCRWDTYRIS FAEI+GFYGL+YWYPFQVTALGLGPIWMSANEDAKRKA
Sbjct  61   SLLTPSGYGADDCRWDTYRISAFAEIVGFYGLNYWYPFQVTALGLGPIWMSANEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AA LEAGEVFAFGLSEQTHGADVYQTDM LTP+  GW ANGEKYYIGNANVARMVSTFGK
Sbjct  121  AALLEAGEVFAFGLSEQTHGADVYQTDMNLTPAHQGWVANGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
              GT    EYVFF ADSQHERY+LIKNVVNSQN+VANYALR YPVTEADILHRG EAFHA
Sbjct  181  FDGT---DEYVFFAADSQHERYELIKNVVNSQNFVANYALRGYPVTEADILHRGPEAFHA  237

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNTVNVCKYNLGWGA+GMCTHA+YE+VTHA+NR LYGTVVTDF+HVRRLLTDAY RL+ 
Sbjct  238  ALNTVNVCKYNLGWGAVGMCTHAMYEAVTHASNRILYGTVVTDFTHVRRLLTDAYARLVG  297

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            M+LVA+RA DYMRSASA+DRRYLLYSPLTKAK+TSEGERVITALWDVIAAKGVEKDT FE
Sbjct  298  MRLVATRACDYMRSASASDRRYLLYSPLTKAKITSEGERVITALWDVIAAKGVEKDTIFE  357

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
             + REIGLLPRLEGTVHINIGLLGKFMPN+LFAP+S LP+IPRRDDAADD FLFAQGPTG
Sbjct  358  AMTREIGLLPRLEGTVHINIGLLGKFMPNFLFAPNSALPLIPRRDDAADDTFLFAQGPTG  417

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GLGKVRFHDWRA FD+  HLPNVALLR Q+DV A++LA+ATPDAAQQKDIDFAF VGQLF
Sbjct  418  GLGKVRFHDWRAPFDSFGHLPNVALLRSQIDVLADMLAAATPDAAQQKDIDFAFAVGQLF  477

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            A VPYAQLILEEA LSGVDE LIDEIF VLVRDFN ++VEL  + ATT EQARFA+RM+R
Sbjct  478  ATVPYAQLILEEAGLSGVDEGLIDEIFAVLVRDFNAYSVELSDKPATTDEQARFALRMIR  537

Query  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RP HDPARYDQIWKDHVL L GAYQM P
Sbjct  538  RPAHDPARYDQIWKDHVLPLGGAYQMRP  565


>gi|183980516|ref|YP_001848807.1| acyl-CoA dehydrogenase FadE4 [Mycobacterium marinum M]
 gi|183173842|gb|ACC38952.1| acyl-CoA dehydrogenase FadE4 [Mycobacterium marinum M]
Length=568

 Score = 1014 bits (2621),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/568 (85%), Positives = 519/568 (92%), Gaps = 0/568 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPN L RKYPD RS EIMAATVDFFESRGKARLK DDH+R WYSDFL+ +   RIFA
Sbjct  1    MLLNPNRLQRKYPDARSAEIMAATVDFFESRGKARLKRDDHDRAWYSDFLNHIAEHRIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP+ YGADDCRWDTYRISEFAEI+GFYGLSYWYPFQVTALGLGPIWMS NEDAKRKA
Sbjct  61   SLLTPSEYGADDCRWDTYRISEFAEIIGFYGLSYWYPFQVTALGLGPIWMSDNEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AA LE GEVFAFGLSEQ HGADVYQTDMILTPS+ GWTA+GEKYYIGNANVARMVSTFGK
Sbjct  121  AAQLEQGEVFAFGLSEQAHGADVYQTDMILTPSEHGWTASGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            I  + +  EYVFF ADSQH+RY+L KNVVNSQNYVANYAL DYPVTEAD+LHRG  AFHA
Sbjct  181  IEDSSKEPEYVFFAADSQHDRYELKKNVVNSQNYVANYALHDYPVTEADLLHRGMGAFHA  240

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNTVNVCKYNLGWGA+GMCTHA YE++THAANRHLYGTVVTDFSHVRRLLTDAY RL+A
Sbjct  241  ALNTVNVCKYNLGWGAVGMCTHAFYEAITHAANRHLYGTVVTDFSHVRRLLTDAYARLVA  300

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            M+LVASRASDYMRSASA DRRYLLYSPLTKAKVTSEGERVI ALWDVIAAKGVEKDTFFE
Sbjct  301  MRLVASRASDYMRSASAEDRRYLLYSPLTKAKVTSEGERVIAALWDVIAAKGVEKDTFFE  360

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
            TVAREIGLLPRLEGTVHINIGLL KFMPN+LF PD+ LP+IPRRDDAADD FLF QGPTG
Sbjct  361  TVAREIGLLPRLEGTVHINIGLLAKFMPNFLFVPDAALPLIPRRDDAADDTFLFNQGPTG  420

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GLGKVRFHDWRA FD+  HLPNVALLREQ+DV  E+LA ATPDA+QQKDIDFAFGVGQ+F
Sbjct  421  GLGKVRFHDWRAPFDSYGHLPNVALLREQIDVLTEMLAGATPDASQQKDIDFAFGVGQIF  480

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            A VPYAQLILEEA LSGVD+AL+DEIFG+LVRDFN++AVEL+ ++ATT +QA+FAMRM+R
Sbjct  481  ALVPYAQLILEEAPLSGVDDALLDEIFGLLVRDFNSYAVELNDKAATTDQQAQFAMRMIR  540

Query  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RP HD ARYDQ+WK+HVL LNGAY+M P
Sbjct  541  RPAHDAARYDQVWKEHVLPLNGAYEMRP  568


>gi|254823270|ref|ZP_05228271.1| FadE4 [Mycobacterium intracellulare ATCC 13950]
Length=569

 Score = 1013 bits (2620),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/569 (86%), Positives = 518/569 (92%), Gaps = 1/569 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHL R+YPDRRS EIMAATVDFFESRGKARLK DDHER+WYS+FLD +GRERIFA
Sbjct  1    MLLNPNHLQRQYPDRRSAEIMAATVDFFESRGKARLKSDDHERVWYSEFLDHIGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP++YGA DCRWDTYRIS FAEI+GFYGL+YWYPFQVTALGLGPIWMSAN DAKRKA
Sbjct  61   SLLTPSAYGAPDCRWDTYRISAFAEIVGFYGLNYWYPFQVTALGLGPIWMSANSDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            A  LEAGEVFAFGLSEQTHGADVYQTDM LTPS GGW ANGEKYYIGNANVARMVSTFGK
Sbjct  121  AGLLEAGEVFAFGLSEQTHGADVYQTDMNLTPSGGGWVANGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQ-EYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFH  239
             AG  ++  EYVFF ADSQHERY LIKNVVNSQNYVANYALRDYPVTEADILHRG EAFH
Sbjct  181  FAGASKNDAEYVFFAADSQHERYQLIKNVVNSQNYVANYALRDYPVTEADILHRGPEAFH  240

Query  240  AALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLI  299
            AALNTVNVCKYNLGWGA+GMCTHA+YE+VTHA+NR LYGTVVTDF+HVRRLLTDAY RL+
Sbjct  241  AALNTVNVCKYNLGWGAVGMCTHAMYEAVTHASNRILYGTVVTDFTHVRRLLTDAYARLV  300

Query  300  AMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFF  359
            AM+LVA+RA DYMRSAS  DRRYLLYSPLTKAK+TSEGERVITALWDVIAAKGVEKDT F
Sbjct  301  AMRLVATRACDYMRSASTDDRRYLLYSPLTKAKITSEGERVITALWDVIAAKGVEKDTIF  360

Query  360  ETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPT  419
            E +AREIGLLPRLEGTVHINIGLLGKFMPN+LFAP+  LP I RRDDAADD FLFAQGPT
Sbjct  361  EAMAREIGLLPRLEGTVHINIGLLGKFMPNFLFAPNDALPSIGRRDDAADDTFLFAQGPT  420

Query  420  GGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
            GGLGKVRFHDWRA F++  HLPNVALLR QVDV AE+LASATPDAAQQKDIDFAF VGQL
Sbjct  421  GGLGKVRFHDWRAPFESFGHLPNVALLRSQVDVLAEMLASATPDAAQQKDIDFAFAVGQL  480

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            FA VPYAQLILEEA LSGVDE L+DEIF VLVRDFN +AVEL  + ATT  QAR+AMRM+
Sbjct  481  FATVPYAQLILEEAGLSGVDEGLLDEIFAVLVRDFNAYAVELSDKPATTDAQARYAMRMI  540

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RRPVHDP+RY QIWK+HVL L+GAYQM P
Sbjct  541  RRPVHDPSRYAQIWKEHVLPLSGAYQMRP  569


>gi|118616869|ref|YP_905201.1| acyl-CoA dehydrogenase FadE4 [Mycobacterium ulcerans Agy99]
 gi|118568979|gb|ABL03730.1| acyl-CoA dehydrogenase FadE4 [Mycobacterium ulcerans Agy99]
Length=568

 Score = 1012 bits (2617),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/568 (85%), Positives = 519/568 (92%), Gaps = 0/568 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPN L RKYPD RS EIMAATVDFFESRGKARLK DDH+R WYSDFL+ +   RIFA
Sbjct  1    MLLNPNRLQRKYPDARSAEIMAATVDFFESRGKARLKRDDHDRAWYSDFLNHIAEHRIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP+ YGADDCRWDTYRISEFAEI+GFYGLSYWYPFQVTALGLGPIWMS NEDAKRKA
Sbjct  61   SLLTPSEYGADDCRWDTYRISEFAEIIGFYGLSYWYPFQVTALGLGPIWMSDNEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AA LE GEVFAFGLSEQ HGADVYQTDMILTPS+ GWTA+GEKYYIGNANVARMVSTFGK
Sbjct  121  AAQLEQGEVFAFGLSEQAHGADVYQTDMILTPSEHGWTASGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            I  + +  EYVFF ADSQH+RY+L KNVVNSQNYVANYAL DYPVTEAD+LHRG  AFHA
Sbjct  181  IEDSSKEPEYVFFAADSQHDRYELKKNVVNSQNYVANYALHDYPVTEADLLHRGMGAFHA  240

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNTVNVCKYNLGWGA+GMCTHA YE++THAANRHLYGTVVTDFSHVRRLLTDAY RL+A
Sbjct  241  ALNTVNVCKYNLGWGAVGMCTHAFYEAITHAANRHLYGTVVTDFSHVRRLLTDAYARLVA  300

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            M+LVASRASDYMRSASA DRRYLLYSPLTKAKVTSEGERVI ALWDVIAAKGVEKDTFFE
Sbjct  301  MRLVASRASDYMRSASAEDRRYLLYSPLTKAKVTSEGERVIAALWDVIAAKGVEKDTFFE  360

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
            TVAREIGLLPRLEGTVHINIGLL KFMPN+LFAPD+ LP+IPRRDDAADD FLF QGPTG
Sbjct  361  TVAREIGLLPRLEGTVHINIGLLAKFMPNFLFAPDAALPLIPRRDDAADDTFLFNQGPTG  420

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GLGKVRFHDWRA F +  HLPNVALLREQ+DV  E+LA ATPDA+QQKDIDFAFGVGQ+F
Sbjct  421  GLGKVRFHDWRAPFGSYGHLPNVALLREQIDVLTEMLAGATPDASQQKDIDFAFGVGQIF  480

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            A VPYAQLILEEA LSGVD+AL+DEIFG+LVRDFN++AVEL+ ++ATT +QA+FAMRM+R
Sbjct  481  ALVPYAQLILEEAPLSGVDDALLDEIFGLLVRDFNSYAVELNDKAATTDQQAQFAMRMIR  540

Query  541  RPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RP HD ARYDQ+WK+HVL LNGAY+M P
Sbjct  541  RPAHDAARYDQVWKEHVLPLNGAYEMRP  568


>gi|118463316|ref|YP_884060.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254777377|ref|ZP_05218893.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium 
ATCC 25291]
 gi|118164603|gb|ABK65500.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
Length=569

 Score = 1000 bits (2585),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/569 (85%), Positives = 511/569 (90%), Gaps = 1/569 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHL R+YPDRRS EIMAATVDFFESRGKARLK DDHER+WYSDFL+ +GRERIFA
Sbjct  1    MLLNPNHLQRRYPDRRSAEIMAATVDFFESRGKARLKSDDHERVWYSDFLEHIGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP  YG+ DCRWDTYRIS FAEI+GFYGL+YWYPFQVTALGLGPIWMS N++AKRKA
Sbjct  61   SLLTPTRYGSADCRWDTYRISGFAEILGFYGLNYWYPFQVTALGLGPIWMSGNDEAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS-DGGWTANGEKYYIGNANVARMVSTFG  179
            A  LEAGEVFAFGLSEQTHGADVYQTDM LTP+  GGWTA G+KYYIGNANVARMVSTFG
Sbjct  121  AGLLEAGEVFAFGLSEQTHGADVYQTDMNLTPAPGGGWTAAGQKYYIGNANVARMVSTFG  180

Query  180  KIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFH  239
            K AG     EYVFF ADS+HERY LIKNVVNSQNYV N+AL DYPVTEADILHRG EAFH
Sbjct  181  KFAGGATDSEYVFFAADSRHERYRLIKNVVNSQNYVGNFALSDYPVTEADILHRGPEAFH  240

Query  240  AALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLI  299
            AALNTVNVCKYNLGWGA+GMCTHA+YE+VTHA+NR LYGTVVTDFSHVRRLL DAY RL+
Sbjct  241  AALNTVNVCKYNLGWGAVGMCTHAMYEAVTHASNRILYGTVVTDFSHVRRLLIDAYARLV  300

Query  300  AMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFF  359
            AM+LVA+RA DYMRSASA DRRYLLYSPLTKAK+T EGERVITALWDVIAAKGVEKDT F
Sbjct  301  AMRLVATRACDYMRSASATDRRYLLYSPLTKAKITGEGERVITALWDVIAAKGVEKDTIF  360

Query  360  ETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPT  419
            E + REIGLLPRLEGTVHINIGLLGKFMPNYLFAP   LPVI RRDDAADD FLFAQGPT
Sbjct  361  EAMTREIGLLPRLEGTVHINIGLLGKFMPNYLFAPSGELPVIGRRDDAADDEFLFAQGPT  420

Query  420  GGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
            GGLGKVRF DWRA FD  AHLPNVALLR Q+DV AE+LASATPDA QQKDIDFAF VGQL
Sbjct  421  GGLGKVRFGDWRAPFDGFAHLPNVALLRAQIDVLAEMLASATPDAVQQKDIDFAFAVGQL  480

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            FA VPYAQLILEEA LSGVD+ALIDEIFGVLVRDFN +AVEL  + ATT +QARFAMRM+
Sbjct  481  FATVPYAQLILEEATLSGVDDALIDEIFGVLVRDFNAYAVELSDKPATTEQQARFAMRMI  540

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RRPVHDPARYDQIWK+ VL L+GAYQM P
Sbjct  541  RRPVHDPARYDQIWKEQVLPLSGAYQMRP  569


>gi|41409767|ref|NP_962603.1| FadE4 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398599|gb|AAS06219.1| FadE4 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336460024|gb|EGO38933.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=569

 Score =  998 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/569 (85%), Positives = 511/569 (90%), Gaps = 1/569 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHL R+YPDRRS EIMAATVDFFESRGKARLK DDHER+WYSDFL+ +GRERIFA
Sbjct  1    MLLNPNHLQRRYPDRRSAEIMAATVDFFESRGKARLKSDDHERVWYSDFLEHIGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTP  YGA DCRWDTYRIS FAEI+GFYGL+YWYPFQVTALGLGPIWMS N++AKRKA
Sbjct  61   SLLTPTRYGAPDCRWDTYRISGFAEILGFYGLNYWYPFQVTALGLGPIWMSGNDEAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS-DGGWTANGEKYYIGNANVARMVSTFG  179
            A  LEAGEVFAFGLSEQTHGADVYQTDM LTP+  GGWTA G+KYYIGNANVARMVSTFG
Sbjct  121  AGLLEAGEVFAFGLSEQTHGADVYQTDMNLTPAPGGGWTAAGQKYYIGNANVARMVSTFG  180

Query  180  KIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFH  239
            K AG     EYVFF ADS+HERY LIKNVVNSQNYV N+AL DYPVTEADILHRG EAFH
Sbjct  181  KFAGGATDSEYVFFAADSRHERYRLIKNVVNSQNYVGNFALCDYPVTEADILHRGPEAFH  240

Query  240  AALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLI  299
            AALNTVNVCKYNLGWGA+GMCTHA+YE+VTHA+NR LYGTVVTDFSHVRRLL DAY RL+
Sbjct  241  AALNTVNVCKYNLGWGAVGMCTHAMYEAVTHASNRILYGTVVTDFSHVRRLLIDAYARLV  300

Query  300  AMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFF  359
            AM+LVA+RA DYMRSASA DRRYLLYSPLTKAK+T EGERVITALWDVIAAKGVEKDT F
Sbjct  301  AMRLVATRACDYMRSASATDRRYLLYSPLTKAKITGEGERVITALWDVIAAKGVEKDTIF  360

Query  360  ETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPT  419
            E + REIGLLPRLEGTVHIN+GLLGKFMPNYLFAP   LPVI RRDDAADD FLFAQGPT
Sbjct  361  EAMTREIGLLPRLEGTVHINVGLLGKFMPNYLFAPSGELPVIGRRDDAADDEFLFAQGPT  420

Query  420  GGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
            GGLGKVRF DWRA FD  AHLPNVALLR Q+DV AE+LASATPDA QQKDIDFAF VGQL
Sbjct  421  GGLGKVRFGDWRAPFDGFAHLPNVALLRAQIDVLAEMLASATPDALQQKDIDFAFAVGQL  480

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            FA VPYAQLILEEA LSGVD+ALIDEIFGVLVRDFN +AVEL  + ATT +QARFAMRM+
Sbjct  481  FATVPYAQLILEEATLSGVDDALIDEIFGVLVRDFNAYAVELSDKPATTEQQARFAMRMI  540

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            RRPVHDPARYDQIWK+ VL L+GAYQM P
Sbjct  541  RRPVHDPARYDQIWKEQVLPLSGAYQMRP  569


>gi|289552483|ref|ZP_06441693.1| acyl-CoA dehydrogenase fadE4 [Mycobacterium tuberculosis KZN 
605]
 gi|289437115|gb|EFD19608.1| acyl-CoA dehydrogenase fadE4 [Mycobacterium tuberculosis KZN 
605]
Length=469

 Score =  964 bits (2492),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/469 (99%), Positives = 469/469 (100%), Gaps = 0/469 (0%)

Query  100  VTALGLGPIWMSANEDAKRKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTA  159
            +TALGLGPIWMSANEDAKRKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTA
Sbjct  1    MTALGLGPIWMSANEDAKRKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTA  60

Query  160  NGEKYYIGNANVARMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYA  219
            NGEKYYIGNANVARMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYA
Sbjct  61   NGEKYYIGNANVARMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYA  120

Query  220  LRDYPVTEADILHRGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGT  279
            LRDYPVTEADILHRGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGT
Sbjct  121  LRDYPVTEADILHRGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGT  180

Query  280  VVTDFSHVRRLLTDAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGER  339
            VVTDFSHVRRLLTDAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGER
Sbjct  181  VVTDFSHVRRLLTDAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGER  240

Query  340  VITALWDVIAAKGVEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLP  399
            VITALWDVIAAKGVEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLP
Sbjct  241  VITALWDVIAAKGVEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLP  300

Query  400  VIPRRDDAADDAFLFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLAS  459
            VIPRRDDAADDAFLFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLAS
Sbjct  301  VIPRRDDAADDAFLFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLAS  360

Query  460  ATPDAAQQKDIDFAFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAV  519
            ATPDAAQQKDIDFAFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAV
Sbjct  361  ATPDAAQQKDIDFAFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAV  420

Query  520  ELHGRSATTAEQARFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            ELHGRSATTAEQARFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP
Sbjct  421  ELHGRSATTAEQARFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  469


>gi|225181507|ref|ZP_03734949.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus 
AHT 1]
 gi|225167755|gb|EEG76564.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus 
AHT 1]
Length=565

 Score =  681 bits (1758),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 317/569 (56%), Positives = 416/569 (74%), Gaps = 6/569 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LLNP    R+Y D RS +IM  T++FFE++GK +LK DD ER+WY D L+F+    IFA
Sbjct  2    ILLNPKQHNREYADERSRQIMLKTIEFFENKGKRQLKKDDRERVWYEDLLEFIKENEIFA  61

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            +LLTP +YG +DCRWDT+R  EF EI+ FYGL YWY +QV+ LGLGPIWMS NE AK +A
Sbjct  62   TLLTPPAYGGEDCRWDTWRNCEFNEILAFYGLHYWYTWQVSILGLGPIWMSDNEQAKARA  121

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGG-WTANGEKYYIGNANVARMVSTFG  179
               L+ GEVFAFGLSE+ HGAD+Y T+M LTP D G + ANGEKYYIGN NVA MVSTFG
Sbjct  122  GELLKKGEVFAFGLSERDHGADIYSTEMSLTPQDDGTYLANGEKYYIGNGNVAEMVSTFG  181

Query  180  KIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFH  239
            K++ T +   YVFFVA+ +++ Y+L+KNVVN+Q+YVA++ L DY V E DIL RG +A+ 
Sbjct  182  KMSDTGD---YVFFVANYKNKNYELVKNVVNAQSYVADFKLNDYVVREEDILSRGQDAWD  238

Query  240  AALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLI  299
             ALNTVNV KYNLGW ++G+CTHA YE++ HAANR LYG  VTDF HV+++  DAY RL+
Sbjct  239  DALNTVNVGKYNLGWASVGICTHAFYEALNHAANRRLYGMYVTDFPHVKQMFVDAYTRLV  298

Query  300  AMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFF  359
            AMKL A R +DYMR+AS  DRRYLLY+P  K KVT++GE VI  LWDVIAAKG E+DT+F
Sbjct  299  AMKLFALRTADYMRAASPQDRRYLLYNPTVKMKVTTQGEEVINLLWDVIAAKGFERDTYF  358

Query  360  ETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPT  419
            E  AR+I  +P+LEGTVH+NI L+ KFM NY F P    P + R+D    D FLF QGP 
Sbjct  359  EMAARDIRAMPKLEGTVHVNIALIVKFMRNYFFNP-QEYPDLARQDQPKHDEFLFNQGPA  417

Query  420  GGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
             GL K+RFHD++A++++   + NV L REQ+ +F E+L +ATPD  Q +D DF   +G++
Sbjct  418  SGLSKIRFHDYKAAYES-RDVANVRLFREQIAIFKEMLMAATPDDKQSRDTDFLLALGEI  476

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            F  V Y QLILE A +  + + L+D+IF  +VRDF   A++L+G+ AT  +Q  + ++M+
Sbjct  477  FTLVVYGQLILENANIYELQDELVDQIFDFMVRDFAKFALQLYGKPATNQKQMDYLLQMI  536

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQMAP  568
             +P  D +RY Q+W++HV AL   Y+M P
Sbjct  537  HKPKTDESRYHQVWQNHVYALKDVYEMNP  565


>gi|89898884|ref|YP_521355.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens 
T118]
 gi|89343621|gb|ABD67824.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
Length=567

 Score =  662 bits (1708),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 317/569 (56%), Positives = 417/569 (74%), Gaps = 8/569 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LLNP HL R YPD+RS EIM  TV FFE  G  +LK D H  +WY DFL+F   E IFA
Sbjct  2    LLLNPRHLVRNYPDQRSREIMEKTVAFFEKTGLTKLKADFHGAVWYEDFLNFCKEEGIFA  61

Query  61   SLLTPASYG--ADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            S++TPA +G   +   WDT+R+  FAEI+GFYGL YWY +QV+ LG+GPIWMS N+ A+ 
Sbjct  62   SMMTPAEHGKEGEHAVWDTWRVCGFAEILGFYGLPYWYAYQVSVLGIGPIWMSKNKKAQA  121

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVST  177
            KA   L+ G +FAFGLSE+ HGAD+Y +DMI+T   DG + A G KYYIGNAN ARMVST
Sbjct  122  KAKRLLDEGGIFAFGLSEKEHGADIYSSDMIVTQLEDGSYRACGGKYYIGNANQARMVST  181

Query  178  FGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEA  237
            FGK+A T    EY++FVADSQH +Y+L+KNVV SQNYVA + L DYP+TE DILH G +A
Sbjct  182  FGKMADT---GEYIYFVADSQHPKYELVKNVVYSQNYVAEFRLHDYPLTEEDILHHGDDA  238

Query  238  FHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVR  297
            ++AALNTVNV KYNLGW +IG+CTHA YE+  HAANRHLY   VTDF HVR+L TDAY R
Sbjct  239  WNAALNTVNVGKYNLGWASIGICTHAFYEAFDHAANRHLYKLTVTDFPHVRQLFTDAYAR  298

Query  298  LIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDT  357
            L+AMKL A RA+DYM++AS  DRRYLL++P+ K KVT++GE VI  LWDVIAAKG EKD 
Sbjct  299  LVAMKLFALRAADYMKAASNEDRRYLLFNPIQKMKVTTQGEEVINLLWDVIAAKGFEKDM  358

Query  358  FFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQG  417
            +F   A EI  LP+LEGTVH+N+ L+ KFM NY FAP +  P +PRRD+ ++D+FLF QG
Sbjct  359  YFAMAAVEIRGLPKLEGTVHVNMALIIKFMANYFFAP-AEYPEVPRRDEGSNDSFLFDQG  417

Query  418  PTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVG  477
            PT GLGK++FHD+  ++D+    PN+++ + Q++ F ++   A P  AQ KDIDF   VG
Sbjct  418  PTKGLGKIKFHDYHIAYDSVDS-PNLSVFKAQIETFKQMAMLAPPTPAQAKDIDFLLTVG  476

Query  478  QLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMR  537
            ++F  V Y QL+LE AR+  ++  L+D++F  +VRDF+  A++++ + ++T  Q    ++
Sbjct  477  EMFTLVVYGQLVLENARIYKIEPELLDQVFDFMVRDFSKFALQMYSKPSSTEGQMAQCLK  536

Query  538  MVRRPVHDPARYDQIWKDHVLALNGAYQM  566
            M+R+PV D  RY ++W +HV  + G Y+M
Sbjct  537  MIRKPVTDDVRYARVWSEHVSKMQGQYKM  565


>gi|302342935|ref|YP_003807464.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii 
DSM 2075]
 gi|301639548|gb|ADK84870.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii 
DSM 2075]
Length=567

 Score =  662 bits (1708),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 320/567 (57%), Positives = 402/567 (71%), Gaps = 4/567 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LLNP + TR YPD  S EIM  T+DFFE +GK  LK D  +RIWY DFL+F    +IF 
Sbjct  2    ILLNPKNHTRAYPDAISKEIMVKTIDFFERKGKRNLKADYRDRIWYDDFLEFQKDNQIFY  61

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            +LLTP +YG    RWDTYR  EF EI+GFYGL YWY +QVT LGLGP+WMS NE  K++ 
Sbjct  62   NLLTPQAYGDGQTRWDTYRNCEFNEILGFYGLVYWYTWQVTILGLGPLWMSHNEAIKKRT  121

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILT-PSDGGWTANGEKYYIGNANVARMVSTFG  179
            A  L+ G +F FGLSE+ HGAD+Y TDM L+    GG+ A G KYYIGN N A ++STFG
Sbjct  122  AQLLKDGAIFGFGLSEREHGADIYTTDMTLSGDGQGGYKARGGKYYIGNGNKAAILSTFG  181

Query  180  KIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFH  239
            ++AGT    EYVFF A   HE+++L+KNVV+SQ YVA YAL DYPV EADI+ RG  A+ 
Sbjct  182  RMAGT--DNEYVFFAAQPGHEKFELVKNVVDSQMYVAEYALHDYPVGEADIIARGPHAWD  239

Query  240  AALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLI  299
            +ALNTVNV KYNLGW ++G+CTHALYES+ HAANR LY   VTDF HVR++  DAY RL+
Sbjct  240  SALNTVNVGKYNLGWASVGICTHALYESINHAANRRLYKMFVTDFPHVRQIFVDAYARLV  299

Query  300  AMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFF  359
            AMKL A RASDY RSA+A DRRYLLY+P+ K KVT +GE +I  LW+VIAAKG E + +F
Sbjct  300  AMKLFAQRASDYFRSANADDRRYLLYNPIVKMKVTVQGENIIDMLWNVIAAKGFENEMYF  359

Query  360  ETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPT  419
             + A +I  LP+LEGT H+N+ L+ KFM NY F P +  P  P+R DAA D+FL+ QGPT
Sbjct  360  SSAASDIRGLPKLEGTAHVNMALIVKFMANYFFNPKA-YPETPKRGDAACDSFLWDQGPT  418

Query  420  GGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
             GLG+++FHD+R       HLPNV +  EQV V    L+ ATP   Q +D DF   +G++
Sbjct  419  RGLGQIQFHDFRPVLAKWEHLPNVKIFSEQVKVLERFLSQATPSKDQARDTDFLLSLGEI  478

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            F  VPY QLILE A   G++EALID+IF   VRDF+  A+EL+ + ++T +Q    M+M+
Sbjct  479  FTLVPYGQLILEAAAHEGLEEALIDQIFDCFVRDFSKFAMELYQKPSSTDQQMDLCMKMI  538

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQM  566
            RRP  D AR+  IW +HV AL G Y+M
Sbjct  539  RRPNVDMARFGTIWAEHVYALEGLYEM  565


>gi|239985971|ref|ZP_04706635.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 
11379]
 gi|291442912|ref|ZP_06582302.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291345859|gb|EFE72763.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
Length=574

 Score =  651 bits (1679),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 333/569 (59%), Positives = 404/569 (72%), Gaps = 4/569 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP     ++ D  +  ++ ATVD+FE+RGK RL  D   R W  DFLDF  RE +FA
Sbjct  7    LLFNPRTYDPEHFDPETRRLLRATVDWFEARGKRRLIEDYRSRAWLGDFLDFAARESLFA  66

Query  61   SLLTPASY-GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            + LTPAS  G DD RWDT RI+   EI GFYGL YWY +QVT LGLGP+W S N +A+ +
Sbjct  67   TFLTPASAAGKDDQRWDTARIAALNEIFGFYGLDYWYAWQVTILGLGPVWQSDNAEARAR  126

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVSTF  178
            AA  L  GEVFAFGLSE+THGAD+Y TDM+LTP  DGG+ A+G KYYIGN N A +VS F
Sbjct  127  AAELLAQGEVFAFGLSEKTHGADIYSTDMLLTPDGDGGFRASGSKYYIGNGNAAGLVSVF  186

Query  179  GKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAF  238
            G+         YVFF ADS+HE Y L+KNVV+S  YV+ + L DYPV  ADILH G  AF
Sbjct  187  GRRTDVEGPDGYVFFAADSRHEAYRLVKNVVDSSKYVSEFRLADYPVAPADILHTGRAAF  246

Query  239  HAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRL  298
             AALNTVNV K+NL   +IG+C HA+YE+VTHA+NR LYG  VT F HVRR LTDAYVRL
Sbjct  247  DAALNTVNVGKFNLCTASIGICEHAMYEAVTHASNRILYGRPVTAFPHVRRELTDAYVRL  306

Query  299  IAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTF  358
            + MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKD +
Sbjct  307  VGMKLFSDRAVDYFRSAGPDDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKDNY  366

Query  359  FETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGP  418
            F   A EI  LP+LEGTVH+N+ L+ KFM N+L  P    P +P R DAADDAFLF QGP
Sbjct  367  FAQAAIEIRGLPKLEGTVHVNLALILKFMRNHLLNP-VDYPAVPTRLDAADDAFLFQQGP  425

Query  419  TGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQ  478
              GLG VRFHDWR +FD    +PNVA  REQ D     + +A PDA Q +D+D    VGQ
Sbjct  426  ARGLGSVRFHDWRTAFDAYTDVPNVARFREQADALCTFVETAAPDAEQSRDLDLLLAVGQ  485

Query  479  LFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRM  538
            LFA V + QLILE+ARL+G+DE L+DE+F VLVRDF+ HAVELHG+ + T +Q  +A+  
Sbjct  486  LFALVVHGQLILEQARLTGLDEELLDELFAVLVRDFSAHAVELHGKDSATEDQQEWALGA  545

Query  539  VRRPVHDPARYDQIWKDHVLALNGAYQMA  567
            VRRPV D  R  +IW + V AL+GAY+MA
Sbjct  546  VRRPVVDAERSARIW-ERVEALSGAYEMA  573


>gi|224369802|ref|YP_002603966.1| Acd9 [Desulfobacterium autotrophicum HRM2]
 gi|223692519|gb|ACN15802.1| Acd9 [Desulfobacterium autotrophicum HRM2]
Length=565

 Score =  650 bits (1676),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 307/566 (55%), Positives = 407/566 (72%), Gaps = 6/566 (1%)

Query  2    LLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFAS  61
            LLNP   + K+ D+ S +IM  T+ FFE++GK +L  D H ++WY DF++F+  ERIFA 
Sbjct  3    LLNPKEESFKHLDQESQDIMKKTIAFFEAKGKTKLTEDYHAKVWYGDFIEFIKNERIFAR  62

Query  62   LLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKAA  121
            LLTP  YG  DCRWDT RI +F EI+GFYGL YWY +QVT LGLGPIWM  NE+ KR+ A
Sbjct  63   LLTPEGYGKKDCRWDTARICDFNEILGFYGLPYWYTWQVTILGLGPIWMGKNEEKKRETA  122

Query  122  AGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVSTFGK  180
              LE G++FAFGLSE+ HGAD+Y ++M LTP  +G + A+G KYYIGNAN A +VS F K
Sbjct  123  QRLEDGDIFAFGLSEKEHGADLYSSEMTLTPMGEGTYMADGGKYYIGNANKAGLVSIFAK  182

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
             + T    EYVFF A+  H  YDL+KNVV++Q+YVA + L  YPVTEADIL +G  A+ +
Sbjct  183  DSDT---DEYVFFTANPTHANYDLVKNVVSNQSYVAEFGLSAYPVTEADILSKGDHAWDS  239

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            ALNT+NV KYNLGW AIG+CTHA +E++THA+ R LYG  VTDF HV+ L+TDA+ RL A
Sbjct  240  ALNTINVGKYNLGWAAIGICTHAFFEAITHASERSLYGKHVTDFPHVKHLMTDAWSRLFA  299

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            MKL A R +DYMR+AS  DRRYLLY+PLTK KVT++GE VI  LWDVIAAKG EKDT+F 
Sbjct  300  MKLFARRNADYMRTASKDDRRYLLYNPLTKMKVTTQGEEVINLLWDVIAAKGFEKDTYFT  359

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
              A EI  LP+LEGTVH+N+ L+ KFM NY FAP + +P +P  D   +D FLF QG T 
Sbjct  360  MAAIEIRGLPKLEGTVHVNMALIVKFMANYFFAP-ADMPDVPTMDQPGNDDFLFNQGTTH  418

Query  421  GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLF  480
            GL K  FHD+ A++ T   LPN+A+ +EQ++     L +  P+ +Q KDIDF   +G+LF
Sbjct  419  GLSKTLFHDFEAAY-TSLDLPNIAVFKEQINALKSFLVTTPPEKSQTKDIDFLLIMGELF  477

Query  481  ANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVR  540
            A V Y QLI+E A+L  V + +ID+IF  +VRDF+ +A++L+ + ++T  Q + ++ M++
Sbjct  478  ALVVYGQLIIENAQLRKVADDVIDQIFDFMVRDFSKYALQLYSKESSTQGQMKMSLAMIK  537

Query  541  RPVHDPARYDQIWKDHVLALNGAYQM  566
            +P  D  R+ ++W+ HVLA++  Y M
Sbjct  538  KPKKDLERFTRVWETHVLAMSNRYAM  563


>gi|145221002|ref|YP_001131680.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
gilvum PYR-GCK]
 gi|315442027|ref|YP_004074906.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145213488|gb|ABP42892.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK]
 gi|315260330|gb|ADT97071.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
Length=579

 Score =  645 bits (1663),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 323/576 (57%), Positives = 407/576 (71%), Gaps = 10/576 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LLNPNH    + D  S  ++ A +D+FE RGKARL  DD + +W +DFL+FV +ER+FA
Sbjct  6    LLLNPNHFDPAWLDPESRRLLRALIDWFEQRGKARLLRDDLDGVWVADFLEFVKKERLFA  65

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTP+ +  G  + RWDT R +  +EI+GFYGLSYWY  QVT LGLGPIW S N  A+ 
Sbjct  66   TFLTPSEFAEGDPNKRWDTARNAVLSEILGFYGLSYWYAEQVTILGLGPIWQSDNVKARE  125

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGG------WTANGEKYYIGNANVA  172
            +AAA LEAGEV AFGLSE+ HGAD+Y TDM+LTP+  G      + A+GEKYYIGN NVA
Sbjct  126  RAAAQLEAGEVMAFGLSERAHGADIYNTDMLLTPASPGADDPVVFRASGEKYYIGNGNVA  185

Query  173  RMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILH  232
             MVS FG+      +  YV+FVADS+H  Y+LI NVV+ Q +V+N+ALRDYPV E DIL 
Sbjct  186  GMVSVFGRRTDVEGADGYVWFVADSRHPDYELIGNVVHGQMFVSNFALRDYPVYEEDILA  245

Query  233  RGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLT  292
             G +AF AALNTVNV K+NL  G+IGMC HA YE++THA NR LYG  VTDF HVR    
Sbjct  246  TGQDAFSAALNTVNVGKFNLCSGSIGMCEHAFYEAITHANNRILYGNPVTDFPHVRATFV  305

Query  293  DAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKG  352
            DAY RLIAMKL + RA DY RSA   DRRYLL++P+TK+KVTSEGE+V+T LWDV+AAKG
Sbjct  306  DAYARLIAMKLFSDRAIDYFRSAGPHDRRYLLFNPVTKSKVTSEGEKVVTLLWDVLAAKG  365

Query  353  VEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAF  412
             EKDT+F  V R IG LPRLEGTVH+N+  + KFMPNY+F P +  P I  RDD ADD F
Sbjct  366  FEKDTYFYQVTRLIGALPRLEGTVHVNVAQILKFMPNYMFNP-AEYPPIGTRDDPADDVF  424

Query  413  LFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDF  472
             ++QGP  G  KVRF DW   ++  A +PNV    EQV  F +LL  + PDA QQ D+DF
Sbjct  425  FWSQGPARGASKVRFADWAPVYERHAGIPNVGRFYEQVQAFKQLLTVSAPDADQQADLDF  484

Query  473  AFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQA  532
               VG LF+ V Y QLILE+A ++G+D  ++D+IF V VRDF+ +AV LHG+ ++TA Q 
Sbjct  485  VLVVGHLFSLVVYGQLILEQAEITGLDRDVLDQIFDVAVRDFSAYAVALHGKPSSTAAQQ  544

Query  533  RFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
             +A+  VR+P  D  R+D++W + V   +G Y M P
Sbjct  545  DWALSAVRKPEPDSGRFDRVW-EQVRGYDGVYTMRP  579


>gi|256391314|ref|YP_003112878.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora 
acidiphila DSM 44928]
 gi|256357540|gb|ACU71037.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila 
DSM 44928]
Length=577

 Score =  642 bits (1655),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 323/572 (57%), Positives = 411/572 (72%), Gaps = 7/572 (1%)

Query  2    LLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFAS  61
            L NP        D  +  ++ A VD+FE RGK RL  +D +R+WY+DFL+F  +E++FA+
Sbjct  8    LFNPRTFDPSAFDEETQRLLTAVVDWFEGRGKRRLIAEDLDRVWYADFLEFAAKEKLFAT  67

Query  62   LLTPA--SYG--ADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAK  117
              TPA  ++G  A   RWDT R +  +EI+GFYGL YWY +QVT LGLGP+WMS N  A+
Sbjct  68   FQTPAGDAFGPAAAAQRWDTARNAALSEILGFYGLPYWYTWQVTVLGLGPVWMSENAAAR  127

Query  118  RKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVS  176
             +AA  L+ G VFAFGLSE+ HGADVY TDMILTP  DGG+TA G KYYIGN NVA +VS
Sbjct  128  ERAARLLDEGHVFAFGLSEKEHGADVYSTDMILTPDGDGGYTATGGKYYIGNGNVAGLVS  187

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+ A       YVFF ADS+HE+++L++NVV+SQ +V+ + L  YPVT+ADILH GA+
Sbjct  188  VFGRRADVEGPDGYVFFAADSRHEKFELVQNVVDSQMFVSEFKLDGYPVTDADILHTGAD  247

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL   ++G+  H+ YE++THA NR LYG  VTDF HVR    DAY 
Sbjct  248  AFSAALNTVNVGKFNLCTASVGIAEHSFYEAITHAHNRILYGHPVTDFGHVRASFADAYA  307

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RLIAMKL ++RA DY RSA+A DRRYLL++P+TK KVTSEGERV+  LWDVIAA+G EKD
Sbjct  308  RLIAMKLFSARAVDYFRSANAEDRRYLLFNPITKMKVTSEGERVVDLLWDVIAARGFEKD  367

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
            T+F      I  LP+LEGTVH+N+ L+ KFMPNYLF+P     V P R DAADDAFLF Q
Sbjct  368  TYFNGATHYIRALPKLEGTVHVNLALVLKFMPNYLFSPQEYAEV-PTRADAADDAFLFQQ  426

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GP  GLGKVRFHDWRA++   A +PNVA   EQ +   + LA+  PD  QQKD+DF   V
Sbjct  427  GPARGLGKVRFHDWRAAYRQAAGVPNVARFTEQAEALTQFLATCPPDEEQQKDLDFLLNV  486

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            G LF  V Y QLILE+ARL+G+++ ++D+IF VLVRDF+ +AV LHG+ ++T  Q  +A+
Sbjct  487  GHLFTLVVYGQLILEQARLTGLEDDVVDQIFDVLVRDFSEYAVALHGKPSSTEAQQAWAL  546

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
              VR+PV D  R+ +IW + V  L+GAY+M P
Sbjct  547  GAVRKPVVDAERFGRIW-ERVAGLSGAYEMRP  577


>gi|182440246|ref|YP_001827965.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. 
griseus NBRC 13350]
 gi|178468762|dbj|BAG23282.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. 
griseus NBRC 13350]
Length=576

 Score =  640 bits (1650),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 328/571 (58%), Positives = 402/571 (71%), Gaps = 6/571 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP     ++ D  +  ++ ATVD+FE+RGK RL  D   R W  DFLDF  +E +FA
Sbjct  7    LLFNPRTYDPEHFDPETRRLLRATVDWFEARGKRRLIEDYRSRAWLGDFLDFAAKEGLFA  66

Query  61   SLLTPASYG-ADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            + LTP + G   D RWDT RI+   EI GFYGL YWY +QVT LGLGP+W S N +A+ +
Sbjct  67   TFLTPTAAGKGRDRRWDTARIAALNEIFGFYGLDYWYAWQVTVLGLGPVWQSDNAEARAR  126

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP---SDGGWTANGEKYYIGNANVARMVS  176
            AA  L  GEVFAFGLSE+THGAD+Y TDM+L P   +DGG+ A G KYYIGN N A +VS
Sbjct  127  AAELLSQGEVFAFGLSEKTHGADIYSTDMLLEPDGEADGGFRAFGSKYYIGNGNAAGLVS  186

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+         YVFF ADS+HE Y L+KNVV+S  YV+ + L  YPV  ADILH G  
Sbjct  187  VFGRRTDVEGPDGYVFFAADSRHEAYHLVKNVVDSSKYVSEFRLDGYPVAPADILHTGRA  246

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL   +IG+C HA+YE+VTHA+NR LYG  VT F HVRR LTDAYV
Sbjct  247  AFDAALNTVNVGKFNLCTASIGICEHAMYEAVTHASNRILYGRPVTAFPHVRRELTDAYV  306

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RL+ MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKD
Sbjct  307  RLVGMKLFSDRAVDYFRSAGPEDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKD  366

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
            T+F   A EI  LP+LEGTVH+N+ L+ KF+ N+L  P    P +P R DAADDAFLF Q
Sbjct  367  TYFAQAAVEIRGLPKLEGTVHVNLALILKFLRNHLLDP-VDFPAVPTRLDAADDAFLFRQ  425

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GP  GLG VRFHDWR +FD  A +PNVA  REQ D     + +A PD  Q +D+D    V
Sbjct  426  GPARGLGSVRFHDWRPAFDAYAEVPNVARFREQADALCAFVETAAPDEEQSRDLDLLLAV  485

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            GQLFA V + QLILE+ARL+G+DE L+DE+F VLVRDF+ HAVELHG+ + T +Q  +A+
Sbjct  486  GQLFALVVHGQLILEQARLTGLDEELLDELFAVLVRDFSAHAVELHGKDSATGDQQSWAL  545

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQMA  567
              VRRPV D AR  +IW + V AL+GAY+MA
Sbjct  546  GAVRRPVVDAARSARIW-ERVEALSGAYEMA  575


>gi|326780909|ref|ZP_08240174.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces 
cf. griseus XylebKG-1]
 gi|326661242|gb|EGE46088.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces 
griseus XylebKG-1]
Length=576

 Score =  639 bits (1649),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 328/571 (58%), Positives = 401/571 (71%), Gaps = 6/571 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP     ++ D  +  ++ ATVD+FE+RGK RL  D   R W  DFLDF  +E +FA
Sbjct  7    LLFNPRTYDPEHFDPETRRLLRATVDWFEARGKRRLIEDYRSRAWLGDFLDFAAKEGLFA  66

Query  61   SLLTPASYG-ADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            + LTP + G   D RWDT RI+   EI GFYGL YWY +QVT LGLGP+W S N +A+ +
Sbjct  67   TFLTPTAAGKGRDRRWDTARIAALNEIFGFYGLDYWYAWQVTILGLGPVWQSDNAEARAR  126

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP---SDGGWTANGEKYYIGNANVARMVS  176
            AA  L  GEVFAFGLSE+THGAD+Y TDM+L P   +DGG+ A G KYYIGN N A +VS
Sbjct  127  AAELLSQGEVFAFGLSEKTHGADIYSTDMLLEPDGEADGGFRAFGSKYYIGNGNAAGLVS  186

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+         YVFF ADS+HE Y L+KNVV S  YV+ + L  YPV  ADILH G  
Sbjct  187  VFGRRTDVEGPDGYVFFAADSRHEAYHLVKNVVESSKYVSEFRLDGYPVAPADILHTGRA  246

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL   +IG+C HA+YE+VTHA+NR LYG  VT F HVRR LTDAYV
Sbjct  247  AFDAALNTVNVGKFNLCTASIGICEHAMYEAVTHASNRILYGRPVTAFPHVRRELTDAYV  306

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RL+ MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKD
Sbjct  307  RLVGMKLFSDRAVDYFRSAGPEDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKD  366

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
            T+F   A EI  LP+LEGTVH+N+ L+ KF+ N+L  P    P +P R DAADDAFLF Q
Sbjct  367  TYFAQAAVEIRGLPKLEGTVHVNLALILKFLRNHLLNP-VDFPAVPTRLDAADDAFLFRQ  425

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GP  GLG VRFHDWR +FD  A +PNVA  REQ D     + +A PD  Q +D+D    V
Sbjct  426  GPARGLGSVRFHDWRPAFDAYAEVPNVARFREQADALCAFVETAAPDEEQSRDLDLLLAV  485

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            GQLFA V + QLILE+ARL+G+DE L+DE+F VLVRDF+ HAVELHG+ + T +Q  +A+
Sbjct  486  GQLFALVVHGQLILEQARLTGLDEELLDELFAVLVRDFSAHAVELHGKDSATGDQQSWAL  545

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQMA  567
              VRRPV D AR  +IW + V AL+GAY+MA
Sbjct  546  GAVRRPVVDAARSARIW-ERVEALSGAYEMA  575


>gi|302524818|ref|ZP_07277160.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302433713|gb|EFL05529.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
Length=575

 Score =  639 bits (1647),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 315/570 (56%), Positives = 406/570 (72%), Gaps = 5/570 (0%)

Query  2    LLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFAS  61
            LLNP     +  D  +  ++ AT+D+FE+RGK RL    H+R +Y+DFL+F G+E +FA+
Sbjct  8    LLNPRDYDARKFDPETQRLLRATIDWFEARGKRRLAQAYHDREFYADFLEFAGKEGLFAT  67

Query  62   LLTPA--SYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
             LTPA  S G  D RWDT RI+  AEI+GFYGL+YWYPFQVT LGLGP+W S N  A+++
Sbjct  68   FLTPAADSAGNPDKRWDTSRIAALAEILGFYGLNYWYPFQVTVLGLGPVWQSGNAAARKR  127

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVSTF  178
            AA  L  G V AFGLSE+ HGAD+Y +D++LTP  +GG+ ANG KYYIGN N AR VS F
Sbjct  128  AAEALAEGGVGAFGLSEKEHGADIYSSDLVLTPDGEGGYRANGSKYYIGNGNCARTVSVF  187

Query  179  GKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAF  238
            G+I G    ++YVFF ADS+H  Y ++KN+V SQ YVA + L DYPV   DILH GAEAF
Sbjct  188  GRIDGVEGPEQYVFFYADSEHPNYHVVKNIVPSQMYVAEFRLEDYPVRAEDILHTGAEAF  247

Query  239  HAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRL  298
             AALNTVN+ K+NL +G IGM TH+LYE++THA NR LYG  VTDF HVRR   +AYVRL
Sbjct  248  SAALNTVNIGKFNLCFGGIGMATHSLYEAITHAQNRILYGHPVTDFPHVRREFVEAYVRL  307

Query  299  IAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTF  358
              MKL + RA DY RSA+  DRRYLLY+P+TK KVT+E ++VI  + DV+AAKG E DT+
Sbjct  308  TGMKLFSDRAIDYFRSANQQDRRYLLYNPITKMKVTTEAQKVIGLVADVVAAKGFEADTY  367

Query  359  FETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGP  418
                  +I  LP+LEGTV +N+ L+ KFMP YLFA     P +P RDDA+DD FLF QGP
Sbjct  368  LAMAKNDIDGLPKLEGTVAVNLALIAKFMPAYLFA-SQEYPAVPTRDDASDDDFLFRQGP  426

Query  419  TGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQ  478
              GL K+RFHDW+ +++   HLPNVA   EQ DV   LL+ ATPD AQQKD+DF   + +
Sbjct  427  ARGLSKIRFHDWKPAYENAKHLPNVARFTEQADVLVRLLSEATPDEAQQKDLDFGLSLTE  486

Query  479  LFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRM  538
            LF  V Y QLILE+A L+GV + ++D++F VLV+DF+  AVELHG+ ++T +Q   A+  
Sbjct  487  LFTLVVYGQLILEQAELTGVSDDVLDQLFAVLVQDFSVAAVELHGKPSSTEKQQELALAG  546

Query  539  VRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            +R+PV D  R+ ++W + V  L+GAY+M P
Sbjct  547  LRKPVPDAERFGRVW-ETVRELSGAYEMNP  575


>gi|297204686|ref|ZP_06922083.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
 gi|297148755|gb|EDY54788.2| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
Length=574

 Score =  635 bits (1639),  Expect = 4e-180, Method: Compositional matrix adjust.
 Identities = 322/572 (57%), Positives = 404/572 (71%), Gaps = 6/572 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP      + D  +  ++ ATVD+FE RGK +L  D   R W  DFL F  +E +FA
Sbjct  5    LLFNPRTYDPAHFDPETRRLLRATVDWFEERGKRQLIEDYRTRAWLGDFLAFAAKENLFA  64

Query  61   SLLTPAS---YGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAK  117
            + LTP+S    G  D RWDT RI+   EI+GFYGL YWY +QVT LGLGP+W S N  A+
Sbjct  65   TFLTPSSAAGEGEADKRWDTARIAALNEILGFYGLDYWYAWQVTILGLGPVWQSDNAAAR  124

Query  118  RKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVS  176
             +AA  L+ GEVFAFGLSE+THGAD+Y TDM+L P  DGG+ A G KYYIGN N A +VS
Sbjct  125  DRAAQLLDQGEVFAFGLSEKTHGADIYSTDMLLEPDGDGGFRATGSKYYIGNGNAAGLVS  184

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+ +       YVFF ADS+H  Y L+KNVV+S  +V+ + L DYPV   D+LH G  
Sbjct  185  VFGRRSDVEGPDGYVFFAADSRHPAYHLVKNVVDSSKFVSEFRLEDYPVRAEDVLHTGRA  244

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL   +IG+C HA+YE+VTHA NR LYG  VT F HVRR LTDAYV
Sbjct  245  AFDAALNTVNVGKFNLCTASIGICEHAMYEAVTHANNRVLYGRPVTAFPHVRRELTDAYV  304

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RL+ MKL + RA DY R A   DRR LL++P+TK KVT+EGE+VI  +WDVIAAKG EKD
Sbjct  305  RLVGMKLFSDRAVDYFRCAGPDDRRSLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKD  364

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
             +F   A EI  LP+LEGTVH+N+ L+ KFM ++L  P +  P +P R DAADD FLF Q
Sbjct  365  NYFAQAAVEIRGLPKLEGTVHVNLALILKFMRSHLLDP-ADYPDVPTRLDAADDTFLFRQ  423

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GP  GLG VRFHDWR +F++ AHLPNVA LREQ D   E +A+A PDA Q +D+D    V
Sbjct  424  GPARGLGSVRFHDWRPAFESYAHLPNVARLREQADALCEFVATAAPDAEQSRDLDLLLAV  483

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            GQLFA V +AQL+LE++RL+G+DE ++DE+F VLVRDF+ HAVELHG+ + T  Q  +A+
Sbjct  484  GQLFALVVHAQLVLEQSRLTGLDEDVLDELFAVLVRDFSAHAVELHGKDSATGLQQEWAL  543

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
              VRRPV DPAR +++W+  V +L+GAY+M P
Sbjct  544  GAVRRPVVDPARTERVWQ-RVESLSGAYEMTP  574


>gi|120401307|ref|YP_951136.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
vanbaalenii PYR-1]
 gi|119954125|gb|ABM11130.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii 
PYR-1]
Length=590

 Score =  635 bits (1638),  Expect = 7e-180, Method: Compositional matrix adjust.
 Identities = 323/587 (56%), Positives = 407/587 (70%), Gaps = 21/587 (3%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LL+PN+   K  D  S  ++AA +D+FE RGK RL  DD    W +DFLDFV RER+FA
Sbjct  6    LLLDPNNFDPKRLDPESRRLLAALIDWFEQRGKVRLLRDDLNAEWVTDFLDFVRRERLFA  65

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTP+ +  G  + RWDT R +  +EI+GFYGLSYWY  QVT LGLGPIW S N  AK 
Sbjct  66   TFLTPSEFANGDPNKRWDTSRNAVLSEILGFYGLSYWYAEQVTILGLGPIWQSGNVKAKE  125

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS---------------DGG--WTANG  161
            +AA  LEAG V AFGLSE+ HGAD+Y TDM+LTP+               D G  + A+G
Sbjct  126  RAAEQLEAGGVMAFGLSERDHGADIYNTDMLLTPAGDERSREEQTTADGDDDGVLFRASG  185

Query  162  EKYYIGNANVARMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALR  221
            EKYYIGN NVA MVS F +      +  YV+FVADS HERY+LI NVV+ Q +V+N+AL 
Sbjct  186  EKYYIGNGNVAGMVSVFARRTDVEGADGYVWFVADSGHERYELIGNVVHGQMFVSNFALH  245

Query  222  DYPVTEADILHRGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVV  281
            DYPV E DIL  G +AF AALNTVNV K+NL  G+IGMC HA YE++ HA NR LYG  V
Sbjct  246  DYPVHEEDILATGPDAFSAALNTVNVGKFNLCSGSIGMCEHAFYEAINHANNRILYGNPV  305

Query  282  TDFSHVRRLLTDAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVI  341
            T F HVR    DAY RLIAMKL + RA DY RSA   DRRYLL++P+TK+KVTSEGE+V+
Sbjct  306  TAFPHVRAGFVDAYTRLIAMKLFSDRAIDYFRSAGPDDRRYLLFNPVTKSKVTSEGEKVV  365

Query  342  TALWDVIAAKGVEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVI  401
            T LWDV+AAKG EK+T+F  V R IG LPRLEGTVH+N+  + KFMPN++F P +  P I
Sbjct  366  TLLWDVLAAKGFEKNTYFYQVTRLIGALPRLEGTVHVNVAQILKFMPNFMFNP-APYPEI  424

Query  402  PRRDDAADDAFLFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASAT  461
              RDD ADD F ++QGP  G  KVRF DW   ++    +PNVA+  +QV  F +LLA+A 
Sbjct  425  GTRDDPADDVFFWSQGPARGASKVRFADWAPVYERNTGIPNVAVFYQQVQAFKDLLATAA  484

Query  462  PDAAQQKDIDFAFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVEL  521
            PDA QQ+D+DF   VG LF  V Y QLILE+A L+G++  L+D+IF V +RDF+ +AV L
Sbjct  485  PDADQQRDLDFVLVVGHLFTLVVYGQLILEQAELTGLESDLVDQIFDVQIRDFSAYAVAL  544

Query  522  HGRSATTAEQARFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            HG+ ++T EQ  +A+  VR+P  D  R+D++W D V + +GAY+M P
Sbjct  545  HGKPSSTLEQQEWALSAVRKPTVDAVRFDRVW-DQVRSYDGAYEMRP  590


>gi|302532444|ref|ZP_07284786.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302441339|gb|EFL13155.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
Length=571

 Score =  634 bits (1635),  Expect = 1e-179, Method: Compositional matrix adjust.
 Identities = 322/569 (57%), Positives = 396/569 (70%), Gaps = 6/569 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP      + D  +  ++ ATVD+FE RGK +L  D   R W  +FL F  +E +FA
Sbjct  5    LLFNPRTYDPAHFDPETRRLLRATVDWFEERGKRKLIEDYRSRAWLGEFLAFSAKEGLFA  64

Query  61   SLLTPASY-GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            + LTP+S  G +D RWDT RI+   EI+GFYGL YWY +QVT LGLGP+W S N DA+ +
Sbjct  65   TFLTPSSAAGREDQRWDTARIAALNEILGFYGLDYWYAWQVTILGLGPVWQSGNADARAR  124

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS---DGGWTANGEKYYIGNANVARMVS  176
            AA  L  GEVFAFGLSE+THGAD+Y TDM+L PS   DGG+ A G KYYIGN N A +VS
Sbjct  125  AAELLTQGEVFAFGLSERTHGADIYSTDMLLEPSADGDGGFRATGSKYYIGNGNAAGLVS  184

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+         YVFF ADS+H  Y L++NVV+S  YV+ + L DYPV  AD+LH G  
Sbjct  185  VFGRRTDVEGPDGYVFFAADSRHPAYHLVQNVVDSSKYVSEFRLEDYPVAAADVLHTGRA  244

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL   +IG+C HA+YE+VTHA NR LYG  VT F HVRR L DAYV
Sbjct  245  AFDAALNTVNVGKFNLCTASIGICEHAMYEAVTHAQNRILYGRPVTAFPHVRRELADAYV  304

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RL+ MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKD
Sbjct  305  RLVGMKLFSDRAVDYFRSAGPDDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKD  364

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
            T+F   A EI  LP+LEGTVH+N+ L+ KFM N+L  P    P +P R DAADD FLF Q
Sbjct  365  TYFAEAAVEIRSLPKLEGTVHVNLALILKFMRNHLLEP-VDYPAVPTRLDAADDDFLFRQ  423

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GP  GLG VRFHDWR +FD  A + NVA  REQ D   E +A+  PD  Q +D+DF   V
Sbjct  424  GPARGLGSVRFHDWRPAFDAYADVANVARFREQADALCEFVATIAPDEEQSRDLDFLLSV  483

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            GQLFA V +AQLILE+ARL+ +D  ++DE+F VLVRDF+ HAVELHG+ + T  Q  +A+
Sbjct  484  GQLFALVVHAQLILEQARLTDLDPDVLDELFSVLVRDFSGHAVELHGKDSATEAQQAWAL  543

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQ  565
              VRRPV D AR  +IW+  V AL+GAY+
Sbjct  544  GAVRRPVVDEARAARIWQ-RVEALSGAYE  571


>gi|226303907|ref|YP_002763865.1| hypothetical protein RER_04180 [Rhodococcus erythropolis PR4]
 gi|226183022|dbj|BAH31126.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=593

 Score =  634 bits (1634),  Expect = 2e-179, Method: Compositional matrix adjust.
 Identities = 312/574 (55%), Positives = 407/574 (71%), Gaps = 10/574 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LL+P+   R   D  +  ++ ATVD+FE+RGK RL  D H++ +YSDFLDF  +E +FA
Sbjct  12   LLLHPSTYDRPEFDATTRRLLGATVDWFEARGKNRLLADYHDKTFYSDFLDFAAKEGLFA  71

Query  61   SLLTPA--SYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPA  S G  D RWDT RI+  +EI+GFYGL+YWYP+QVT LGLGP+W S NE A+ 
Sbjct  72   TFLTPARDSGGDSDKRWDTSRIAALSEILGFYGLNYWYPWQVTILGLGPVWQSGNETARA  131

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS-DGGWTANGEKYYIGNANVARMVST  177
            +AA+ L++G V AFGLSE+ HGADVY TDM+LTP+  GG+ A+G KYYIGN N A  VS 
Sbjct  132  RAASALDSGGVAAFGLSEKEHGADVYSTDMVLTPNGSGGYLASGSKYYIGNGNCANTVSV  191

Query  178  FGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEA  237
            FG++ G   + +YVFF ADS H  + ++KN+V +Q YVA ++L DYPV   DILH G  A
Sbjct  192  FGRVDGVEGADQYVFFYADSDHPAFTVVKNIVPAQMYVAEFSLADYPVAAEDILHTGEAA  251

Query  238  FHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVR  297
            F AALNTVN+ K+NL +G IGM THALYE++THA NR L+G  VT F HVRR   DAY R
Sbjct  252  FSAALNTVNIGKFNLCFGGIGMSTHALYETITHAHNRILFGNPVTAFPHVRREFVDAYAR  311

Query  298  LIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDT  357
            L+AM+L + RA DY R+AS  DRRYLL++P+TK KVT+E ++VI  L D+ AAKG EKD+
Sbjct  312  LLAMRLFSDRAVDYFRTASPEDRRYLLFNPVTKMKVTTEAQKVIGLLSDIAAAKGFEKDS  371

Query  358  FFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQG  417
            +      ++  LP+LEGTV +N+ L+ KFMP YLFAP+S  P IP R+DAADD FLF QG
Sbjct  372  YLAVAKMDVDGLPKLEGTVAVNLALIAKFMPAYLFAPES-FPAIPTRNDAADDEFLFRQG  430

Query  418  PTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVG  477
            P  GL KVRF DWRA +   A +PNVAL  EQ +    LLA A PDAAQQ D+DF   + 
Sbjct  431  PARGLSKVRFDDWRAVYAKFADVPNVALFVEQAEALVTLLAEAAPDAAQQVDLDFGLAIT  490

Query  478  QLFANVPYAQLILEEARLSGVDE-----ALIDEIFGVLVRDFNTHAVELHGRSATTAEQA  532
            +LF  V Y QLILE+A + G+DE      ++D+IF VLVRDF+  AVEL+G+ + + +Q 
Sbjct  491  ELFTLVVYGQLILEQAEILGLDEGQRSDGVLDQIFDVLVRDFSAAAVELYGKPSASEDQQ  550

Query  533  RFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQM  566
            R A+  +RRP     R++ +W+  V+AL+GAY+M
Sbjct  551  RLALASIRRPAFAAERFEYVWQ-QVVALSGAYEM  583


>gi|226306105|ref|YP_002766065.1| hypothetical protein RER_26180 [Rhodococcus erythropolis PR4]
 gi|226185222|dbj|BAH33326.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=576

 Score =  633 bits (1632),  Expect = 3e-179, Method: Compositional matrix adjust.
 Identities = 312/570 (55%), Positives = 407/570 (72%), Gaps = 6/570 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP+       D  +  ++ AT+++FESRGK +L  DD + +W SDFL+FVG+E++FA
Sbjct  7    LLFNPHTYDPAQFDPETRRLLRATIEWFESRGKKQLLQDDLDAVWVSDFLEFVGKEKLFA  66

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            +  TPA++  G ++ RWD  R +  +EI GFYGL+YWY +QVT LGLGPIWMS N+ AK+
Sbjct  67   TFQTPAAFADGDENRRWDGARNAALSEIFGFYGLAYWYAWQVTILGLGPIWMSDNDAAKK  126

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDG--GWTANGEKYYIGNANVARMVS  176
            +AA  L  G V AFGLSE+ HGADVY TDM+LTP+DG   + A+GEKYYIGN NVA MVS
Sbjct  127  RAAQELVDGGVMAFGLSERDHGADVYSTDMLLTPTDGDVAFRASGEKYYIGNGNVAGMVS  186

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+       + YVFFVADS H  Y L+ NV+  Q YV+N+ L DYPV E DILH G  
Sbjct  187  VFGRRTDVEGPEGYVFFVADSAHPNYQLVDNVLRGQMYVSNFRLDDYPVREEDILHTGVA  246

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL  G+IG+  HA +E++THA NR LYG  VTDF+HVR    DAY 
Sbjct  247  AFEAALNTVNVGKFNLCTGSIGITEHAFFEAITHAQNRILYGNPVTDFAHVRAAFVDAYS  306

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RLIAMK  ++RA DY RSAS  DRRYLL++P+TKAKVTSEGE+V+  L DVIAAKG EK 
Sbjct  307  RLIAMKQFSARAVDYFRSASLEDRRYLLFNPMTKAKVTSEGEKVVGLLHDVIAAKGYEKS  366

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
            T+F   A+ IG LP+LEGTVH+N+GL+ KF+PNYLF P +  P I  RDDAADD F + Q
Sbjct  367  TYFREAAQMIGTLPKLEGTVHVNVGLILKFLPNYLFNP-AEFPEIVTRDDAADDEFFWNQ  425

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GPT G  K++FH+W+  ++  + +PNVA   EQ     ELL +A PDA QQKD+DF   V
Sbjct  426  GPTRGAAKIQFHEWKPVYEKHSSIPNVARFYEQAIALTELLTAAAPDAQQQKDLDFMLNV  485

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            G LF+ V Y  LILE+A +SG+D  ++D+IF   +RDF+ +A+ LHG+ ++T EQ ++A+
Sbjct  486  GHLFSLVVYGHLILEQAEISGLDADVVDQIFDFQIRDFSGYAIALHGKPSSTPEQQKWAL  545

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQM  566
              VR+PV D  R+D++W+  V A +GAY+M
Sbjct  546  AAVRKPVVDSERFDRVWQ-QVKAYDGAYEM  574


>gi|302556388|ref|ZP_07308730.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
 gi|302474006|gb|EFL37099.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
Length=574

 Score =  632 bits (1630),  Expect = 5e-179, Method: Compositional matrix adjust.
 Identities = 318/571 (56%), Positives = 400/571 (71%), Gaps = 6/571 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP      + D  +  ++ ATVD+FE RGK +L  D   R W  DFL F  +E +FA
Sbjct  5    LLFNPRTYAPTHFDPETRRLLRATVDWFEERGKRQLIEDYRTRAWLGDFLAFAAKESLFA  64

Query  61   SLLTP---ASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAK  117
            + LTP   A  G  D RWDT RI+   EI+GFYGL YWY +QVT LGLGP+W S N  A+
Sbjct  65   TFLTPSATAGAGEPDKRWDTARIAALNEILGFYGLDYWYAWQVTILGLGPVWQSDNAAAR  124

Query  118  RKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVS  176
             +AA  L  GEVFAFGLSE+ HGAD+Y TDM+L P  +GG+ A G KYYIGN N A +VS
Sbjct  125  ARAAELLSQGEVFAFGLSEKAHGADIYSTDMLLEPDCNGGFRATGSKYYIGNGNAAGLVS  184

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+         YVFF ADS+H  Y L+KNVV+S  +V+ + L DYPVT  D+LH G  
Sbjct  185  VFGRRTDVEGPDGYVFFAADSRHPAYHLVKNVVDSSKFVSEFRLEDYPVTSDDVLHTGRA  244

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL   +IG+C HA+YE+VTHA+NR LYG  VT F HVRR LTDAYV
Sbjct  245  AFDAALNTVNVGKFNLCTASIGICEHAMYEAVTHASNRVLYGRPVTAFPHVRRELTDAYV  304

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RL+ MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKD
Sbjct  305  RLVGMKLFSDRAVDYFRSAGPDDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKD  364

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
             +F   A EI  LP+LEGTVH+N+ L+ KFM N+L  P +  P +P R +AADD FLF Q
Sbjct  365  NYFSQAAVEIRGLPKLEGTVHVNLALILKFMRNHLLDP-AEYPNVPTRLEAADDDFLFRQ  423

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GP  GLG VRFHDWR +F+  AHLPNVA LREQ D   E +A+A PDA Q +D+D    +
Sbjct  424  GPARGLGSVRFHDWRPAFEAYAHLPNVARLREQADALCEFVATAAPDADQSRDLDLVLSI  483

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            GQLFA V + QL+LE+A L+G+DE ++DE+F VLVRDF+ H+VELHG+ + T +Q  +A+
Sbjct  484  GQLFALVVHGQLVLEQAGLTGLDEDVLDELFAVLVRDFSGHSVELHGKDSATEQQQEWAL  543

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQMA  567
              +RRPV D AR +++W+  V AL+G Y+MA
Sbjct  544  ASIRRPVVDEARTERVWQ-RVEALSGTYEMA  573


>gi|254384324|ref|ZP_04999667.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343212|gb|EDX24178.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
Length=575

 Score =  630 bits (1624),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 324/573 (57%), Positives = 397/573 (70%), Gaps = 7/573 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP     ++ D  +  ++ ATVD+FE RGK +L  D   R W  DF+ F  +E +FA
Sbjct  5    LLFNPRTYDPQHFDPETRRLLRATVDWFEERGKRKLIEDYRTRAWLGDFIAFSAKEGLFA  64

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPAS   G  D RWDT RI+   EI GFYGL YWY +QVT LGLGP+W S N  A+ 
Sbjct  65   TFLTPASAADGRPDRRWDTARIAALNEIFGFYGLDYWYAWQVTILGLGPVWQSDNAAARA  124

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS---DGGWTANGEKYYIGNANVARMV  175
            +AA  L  GEVFAFGLSE+THGAD+Y TDM+L P+    GG+ A G KYYIGN N A +V
Sbjct  125  RAAELLSQGEVFAFGLSEKTHGADIYSTDMLLEPATDGSGGFRATGSKYYIGNGNAAGLV  184

Query  176  STFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGA  235
            S FG+         YVFF ADS+H  Y L+KNVV+S  YV+ + L DYPV+  D+LH G 
Sbjct  185  SVFGRRTDIEGPDGYVFFAADSRHPAYRLVKNVVDSSKYVSEFRLEDYPVSADDVLHTGR  244

Query  236  EAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAY  295
             AF AALNTVNV K+NL   +IG+C HA+YE+VTHA NR LYG  VT F HVRR L DAY
Sbjct  245  AAFDAALNTVNVGKFNLCTASIGICEHAMYEAVTHAQNRVLYGRPVTAFPHVRRELADAY  304

Query  296  VRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEK  355
            VRL+ MKL + RA DY R+A   DRRYLL++P+TK KVT+EGE+VI  LWDVIAAKG EK
Sbjct  305  VRLVGMKLFSDRAVDYFRTAGPDDRRYLLFNPMTKMKVTTEGEKVIDLLWDVIAAKGFEK  364

Query  356  DTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFA  415
            DT+F   A EI  LP+LEGTVH+N+ L+ KFM N+L  P    PV P R DAADDAFLF 
Sbjct  365  DTYFAQAAVEIRGLPKLEGTVHVNLALILKFMRNHLLDPAEYAPV-PTRLDAADDAFLFR  423

Query  416  QGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFG  475
            QGP  GLG VRFHDWR +FD  A +PNVA  REQ D   E + +A PD  Q +D+D    
Sbjct  424  QGPARGLGSVRFHDWRPAFDAYAAVPNVARFREQADALCEFVTTAAPDERQSRDLDLLLA  483

Query  476  VGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFA  535
            VGQLFA V + QLILE+ARL+G+DE ++DE+F VLVRDF+ HAVELHG+ + T  Q  +A
Sbjct  484  VGQLFALVVHGQLILEQARLTGLDEDVLDELFSVLVRDFSAHAVELHGKDSATEPQQTWA  543

Query  536  MRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            +  VRRPV D AR  ++W   V AL+G+Y+MAP
Sbjct  544  LGAVRRPVVDEARAARVWA-RVEALSGSYEMAP  575


>gi|229491413|ref|ZP_04385237.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229321698|gb|EEN87495.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
Length=576

 Score =  629 bits (1622),  Expect = 5e-178, Method: Compositional matrix adjust.
 Identities = 311/570 (55%), Positives = 406/570 (72%), Gaps = 6/570 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP+       D  +  ++ AT+++FESRGK +L  DD + +W SDFL+FVGRE++FA
Sbjct  7    LLFNPHTYDPAQFDPETRRLLRATIEWFESRGKKQLLQDDLDAVWVSDFLEFVGREKLFA  66

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            +  TPA++  G ++ RWD  R +  +EI GFYGL+YWY +QVT LGLGPIWMS N+ AK+
Sbjct  67   TFQTPAAFADGDENRRWDGARNAALSEIFGFYGLAYWYAWQVTILGLGPIWMSDNDAAKK  126

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDG--GWTANGEKYYIGNANVARMVS  176
            +AA  L  G V AFGLSE+ HGADVY TDM+LTP+DG   + A+GEKYYIGN NVA MVS
Sbjct  127  RAAQELADGGVMAFGLSERDHGADVYSTDMLLTPTDGDVAFRASGEKYYIGNGNVAGMVS  186

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+       + YVFFVADS H  Y L+ NV+  Q YV+N+ L DYPV E DILH G  
Sbjct  187  VFGRRTDVEGPEGYVFFVADSAHPNYQLVDNVLRGQMYVSNFRLDDYPVREEDILHTGVA  246

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL  G+IG+  HA +E++THA NR LYG  VTDF+HVR    DAY 
Sbjct  247  AFEAALNTVNVGKFNLCTGSIGITEHAFFEAITHAQNRILYGNPVTDFAHVRAAFVDAYS  306

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RLIAMK  ++RA DY RSAS  DRRYLL++P+TKAKVTSEGE+V+  L DVIAAKG EK 
Sbjct  307  RLIAMKQFSARAVDYFRSASLEDRRYLLFNPMTKAKVTSEGEKVVGLLHDVIAAKGYEKS  366

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
            T+F   A+ IG LP+LEGTVH+N+GL+ KF+PNYLF   +  P I  RDDAADD F + Q
Sbjct  367  TYFREAAQMIGTLPKLEGTVHVNVGLILKFLPNYLFN-SAQFPEIVTRDDAADDEFFWNQ  425

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GPT G  K++FH+W+  ++  + +PNVA   EQ     ELL +A PDA QQKD+DF   V
Sbjct  426  GPTRGAAKIQFHEWKPVYEKHSSIPNVARFYEQAIALTELLTAAAPDAQQQKDLDFMLNV  485

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            G LF+ V Y  LILE+A +SG+D  ++D+IF   +RDF+ +A+ L+G+ ++T EQ ++A+
Sbjct  486  GHLFSLVVYGHLILEQAEISGLDADVVDQIFDFQIRDFSGYAIALYGKPSSTPEQQKWAL  545

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQM  566
              VR+PV D  R+D++W+  V A +GAY+M
Sbjct  546  AAVRKPVVDSERFDRVWQ-QVKAYDGAYEM  574


>gi|344998079|ref|YP_004800933.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces 
sp. SirexAA-E]
 gi|344313705|gb|AEN08393.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. SirexAA-E]
Length=572

 Score =  629 bits (1621),  Expect = 6e-178, Method: Compositional matrix adjust.
 Identities = 319/570 (56%), Positives = 394/570 (70%), Gaps = 4/570 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP      + D  +  ++ ATVD+FE RGK RL  D   R W  +FLDF  +ER+FA
Sbjct  5    LLFNPRTYDPAHFDPETRRLLRATVDWFEDRGKRRLIEDYRSRAWLGEFLDFAAKERLFA  64

Query  61   SLLTPASYGA-DDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            + LTPA+    +D RWDT RI+   EI GFYGL YWY +QVT LGLGP+W S N  A+ +
Sbjct  65   TFLTPAAVAEHEDQRWDTARIAALNEIFGFYGLDYWYAWQVTILGLGPVWQSDNAAARTR  124

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVSTF  178
            AA  L  GEVFAFGLSE+ HGAD+Y TDM+L P  DGG+ A+G KYYIGN N A +VS F
Sbjct  125  AAELLSRGEVFAFGLSERAHGADIYSTDMLLEPDGDGGFLASGSKYYIGNGNAAGLVSVF  184

Query  179  GKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAF  238
            G+         YVFF ADS+H  Y L+KNVV+S  YV+ + L  YPV   D+LH G  AF
Sbjct  185  GRRTDVEGPDGYVFFAADSRHPAYHLVKNVVDSSKYVSEFRLAGYPVGPDDVLHTGRAAF  244

Query  239  HAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRL  298
             AALNTVNV K+NL   +IG+C HA+YE+VTHA NR LYG  VT F HVRR L DAYVRL
Sbjct  245  DAALNTVNVGKFNLCTASIGICEHAMYEAVTHAHNRVLYGRPVTAFPHVRRELADAYVRL  304

Query  299  IAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTF  358
            + MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKDT+
Sbjct  305  VGMKLFSDRAVDYFRSAGPDDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKDTY  364

Query  359  FETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGP  418
            F   A EI  LP+LEGTVH+N+ L+ KF+ N+L AP    PV P R DAADDAFLF QGP
Sbjct  365  FAQAAVEIRSLPKLEGTVHVNLALILKFLRNHLLAPAGYDPV-PARLDAADDAFLFRQGP  423

Query  419  TGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQ  478
              GLG +RFHDWR +FD  A +PNVA  REQ D   + + +A P   Q +D+D    VGQ
Sbjct  424  ARGLGSIRFHDWRPAFDAYADVPNVARFREQADALCDFVRTAAPGEEQSRDLDLLLSVGQ  483

Query  479  LFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRM  538
            LFA V +AQLILE+AR + +D  ++DE+F VLVRDF+ HAVELHG+ + T EQ  +A+  
Sbjct  484  LFALVVHAQLILEQARATDLDTDVLDELFSVLVRDFSAHAVELHGKESATQEQQDWAIGA  543

Query  539  VRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            VRRPV D  R  ++W + V AL+G Y+MAP
Sbjct  544  VRRPVTDADRSARVW-ERVAALSGTYEMAP  572


>gi|126347702|emb|CAJ89417.1| putative acyl-coA dehydrogenase [Streptomyces ambofaciens ATCC 
23877]
Length=572

 Score =  628 bits (1619),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 320/570 (57%), Positives = 397/570 (70%), Gaps = 4/570 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP      + D  +  ++ ATVD+FE+RGK RL  D   R+W  DFL F  +E +FA
Sbjct  5    LLFNPRTYDPAHFDPETRRLLRATVDWFEARGKRRLIEDYRSRVWLEDFLAFAAKEGLFA  64

Query  61   SLLTPASYG-ADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            + LTPA+ G   D RWDT RI+   EI GFYGL YWY +QVT LGLGP+W S N  A+  
Sbjct  65   TFLTPAADGDRPDQRWDTARIAALNEIFGFYGLDYWYAWQVTILGLGPVWQSDNAAARAH  124

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVSTF  178
            AA  L  GEVFAFGLSE++HGAD+Y TDM+L P  +GG+ A G KYYIGN N A +VS F
Sbjct  125  AAELLAQGEVFAFGLSEKSHGADIYSTDMLLEPDGEGGFRATGSKYYIGNGNAAGLVSVF  184

Query  179  GKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAF  238
            G+       + YVFF ADS+H  Y L+KNVV+S  YV+ + L +YPV   D+LH G  AF
Sbjct  185  GRRTDVDGPEGYVFFAADSRHPDYRLVKNVVDSSKYVSEFRLENYPVGPQDVLHTGRAAF  244

Query  239  HAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRL  298
             AALNTVNV K+NL   +IG+C HA+YE+VTHA NR LYG  VT F HVRR L DAYVRL
Sbjct  245  DAALNTVNVGKFNLCTASIGICEHAMYEAVTHAHNRILYGRPVTAFPHVRRELIDAYVRL  304

Query  299  IAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTF  358
            + MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKDT+
Sbjct  305  VGMKLFSDRAVDYFRSAGPDDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKDTY  364

Query  359  FETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGP  418
            F   A EI  LP+LEGTVH+N+ L+ KF+ N+L  P    P +P R DAADD FLF QGP
Sbjct  365  FAQAAVEIRGLPKLEGTVHVNLALILKFLRNHLLDP-VEHPRVPTRLDAADDTFLFRQGP  423

Query  419  TGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQ  478
              GLG +RFHDWR +FDT A +PNVA  REQ D     + +A PD  Q +D+D    VGQ
Sbjct  424  ARGLGSIRFHDWRTAFDTYAEVPNVARFREQADALCTFVTTAAPDERQSRDLDLLLAVGQ  483

Query  479  LFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRM  538
            LFA V + QLILE+A L+G+DE ++DE+F VLVRDF+ HAVELHG+ + T  Q R+A+  
Sbjct  484  LFALVVHGQLILEQAELTGLDEDVLDELFSVLVRDFSNHAVELHGKDSATEPQQRWALGA  543

Query  539  VRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            VRRPV D AR  ++W + V AL+GAY+MAP
Sbjct  544  VRRPVVDEARSARVW-ERVEALSGAYEMAP  572


>gi|300783471|ref|YP_003763762.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299792985|gb|ADJ43360.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|340524856|gb|AEK40061.1| acyl-CoA dehydrogenase FadE4 [Amycolatopsis mediterranei S699]
Length=568

 Score =  626 bits (1615),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 307/570 (54%), Positives = 399/570 (70%), Gaps = 4/570 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNP+       D  +  ++ AT+D+FE RGKA+L  D H R +Y+DFL+F G+E +F+
Sbjct  1    MLLNPHEYDPACFDAETRRLLRATIDWFEQRGKAKLTEDYHARTFYADFLEFAGKEGLFS  60

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPA+   G  D RWDT R++  +EI+GFYGL+YWYP+QVT LGLGP+W S N+ A++
Sbjct  61   TFLTPAANAEGHPDKRWDTSRVAALSEILGFYGLNYWYPWQVTILGLGPVWQSGNDVARK  120

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTF  178
            +AA  L+AG V AFGLSE+ HGAD+Y +D++LT    G+ ANG KYYIGN N AR VS F
Sbjct  121  RAADALDAGGVGAFGLSEKDHGADIYSSDLVLTKDGDGYRANGSKYYIGNGNCARTVSVF  180

Query  179  GKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAF  238
            G+I G     +YVFF ADS H  Y ++KNVV SQ YVA + L DYPV   DILH GAEAF
Sbjct  181  GRIDGVEGPDQYVFFYADSGHPNYHVVKNVVPSQMYVAEFRLEDYPVHAEDILHVGAEAF  240

Query  239  HAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRL  298
             AALNTVN+ K+NL +G IGM TH+LYE++THA NR LYG  VTDF HVRR   +AY RL
Sbjct  241  SAALNTVNIGKFNLCFGGIGMATHSLYEAITHAHNRVLYGKPVTDFPHVRREFVEAYARL  300

Query  299  IAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTF  358
             AMKL + RA DY RSA   DRRYLL++P+TK KVT+E ++VI  + DV+AAKG E DT+
Sbjct  301  TAMKLFSDRAVDYFRSAHPDDRRYLLFNPITKMKVTTEAQKVIGLVADVVAAKGFEADTY  360

Query  359  FETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGP  418
                  +I  LP+LEGTV +N+ L+ KFMPNYLFAP    PV P R DA DD FLF QGP
Sbjct  361  LAMSKNDIDGLPKLEGTVAVNLALIAKFMPNYLFAPQEYAPV-PTRTDAVDDEFLFRQGP  419

Query  419  TGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQ  478
              GL KVRFHDW+ ++    H+PNVAL  EQ     +LL  A PD AQQ D+DF   + +
Sbjct  420  ARGLSKVRFHDWKTAYAEAGHIPNVALFTEQAGFLVKLLTEAAPDEAQQADLDFGLALTE  479

Query  479  LFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRM  538
            LF  + Y QL+LE+AR++G+D+ + D+IF VLV+DF+  AV+L+G++++T  Q   A+  
Sbjct  480  LFTLIVYGQLVLEQARITGLDDEVTDQIFAVLVQDFSVAAVDLNGKASSTEAQQAIALAA  539

Query  539  VRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            +R+PV D  R++ +W   V AL+G Y M P
Sbjct  540  LRKPVVDAGRFENVWA-RVRALSGVYAMHP  568


>gi|226366074|ref|YP_002783857.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244564|dbj|BAH54912.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
Length=576

 Score =  624 bits (1609),  Expect = 1e-176, Method: Compositional matrix adjust.
 Identities = 318/574 (56%), Positives = 399/574 (70%), Gaps = 8/574 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L +PN    ++ D  +  ++ A +++FESRGK RL  DD E +W  DFL FV RE++FA
Sbjct  5    LLFDPNSYDPEHFDPETRRLLRALIEWFESRGKKRLIEDDLEAVWPEDFLGFVKREKLFA  64

Query  61   SLLTPASYGADDC--RWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPA     D   RWD  R +  +EI GFYGL+YWY +QVT LGLGPIWMS N  AK 
Sbjct  65   TFLTPAESAGGDPGKRWDAARNAALSEIFGFYGLAYWYAWQVTVLGLGPIWMSGNRAAKD  124

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS----DGGWTANGEKYYIGNANVARM  174
            +AA  L+ G V AFGLSE+ HGADVY TDM+LTP+    D  +TA+G+KYYIGN NVA M
Sbjct  125  RAAQLLDDGGVLAFGLSEREHGADVYSTDMLLTPAEDDADLAFTASGDKYYIGNGNVAGM  184

Query  175  VSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRG  234
            VS FG+      S  YVFFVADS+H  Y L  NVV+ Q YV+ + L DYPV E DILH G
Sbjct  185  VSVFGRRTDVEGSDGYVFFVADSRHPAYHLQGNVVHGQMYVSTFRLEDYPVREEDILHTG  244

Query  235  AEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDA  294
              AF AALNTVNV K+NL  G+IG+  HA YES+THA NR LYG  VTDF HVR    DA
Sbjct  245  VAAFEAALNTVNVGKFNLCTGSIGISEHAFYESITHAHNRILYGNPVTDFPHVRGNFVDA  304

Query  295  YVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVE  354
            Y RL+AMKL ++RA DY RSAS  DRRYLL++P+TKAKVTSEGE+VI  L DVIAAKG E
Sbjct  305  YSRLVAMKLFSARAVDYFRSASLDDRRYLLFNPMTKAKVTSEGEKVIALLHDVIAAKGYE  364

Query  355  KDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLF  414
            K+T+F   A+ IG LP+LEGTVH+N+GL+ KFMPNYL  P +  P I  R DAADDAF +
Sbjct  365  KNTYFREAAQLIGTLPKLEGTVHVNVGLILKFMPNYLLNP-AEYPEIGTRLDAADDAFFW  423

Query  415  AQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAF  474
            AQGPT G GK++FHDW  +++  + +PNVA   EQ     ELL +A PD  QQKD+DF  
Sbjct  424  AQGPTRGAGKIQFHDWTTAYEAHSGVPNVARFHEQATALRELLTTAPPDTEQQKDLDFLL  483

Query  475  GVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARF  534
             +G LF+ V Y  LILE+A ++G+D  L+D+IF   +RDF+ +AV LHG+S+ T  Q R+
Sbjct  484  DLGHLFSLVVYGHLILEQADIAGIDRDLVDQIFDFQIRDFSRYAVALHGKSSATEAQQRW  543

Query  535  AMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            A+  +RRPV D  R+ ++W   V   +GAY+M P
Sbjct  544  ALGAIRRPVVDAERFSRVWA-QVEGYDGAYEMRP  576


>gi|111023588|ref|YP_706560.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110823118|gb|ABG98402.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
Length=576

 Score =  624 bits (1608),  Expect = 2e-176, Method: Compositional matrix adjust.
 Identities = 317/574 (56%), Positives = 401/574 (70%), Gaps = 8/574 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L +P     ++ D  +  ++ A +++FESRGK RL  DD E +W  DFL+FV RE++FA
Sbjct  5    LLFDPTSYDPEHFDPETRRLLRALIEWFESRGKKRLLEDDLEAVWPEDFLEFVKREKLFA  64

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
              LTPA    G  D RWD  R +  +EI GFYGL+YWY +QVT LGLGPIWMS N  AK 
Sbjct  65   KFLTPADLAGGDPDKRWDAARNAALSEIFGFYGLAYWYAWQVTILGLGPIWMSGNRAAKE  124

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDG----GWTANGEKYYIGNANVARM  174
            +AA  L+ G V AFGLSE+ HGADVY TDM+L P++      +TA+G+KYYIGN NVA M
Sbjct  125  RAATLLDDGGVLAFGLSEKEHGADVYSTDMLLNPAENDPGLAFTASGDKYYIGNGNVAGM  184

Query  175  VSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRG  234
            VS FG+      S  YVFFVADS+H  Y L  NVV+ Q YV+ + L DYPV E DILH G
Sbjct  185  VSVFGRRTDVEGSDGYVFFVADSRHPAYHLQGNVVHGQMYVSTFRLEDYPVREEDILHTG  244

Query  235  AEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDA  294
              AF AALNTVNV K+NL  G+IG+  HA YES+THA NR LYG  VTDF+HVR    DA
Sbjct  245  VAAFEAALNTVNVGKFNLCTGSIGISEHAFYESITHAHNRILYGNPVTDFAHVRGNFVDA  304

Query  295  YVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVE  354
            Y RLIAMKL ++R+ DY RSAS  DRRYLL++P+TKAKVTSEGE+VI  L DVIAAKG E
Sbjct  305  YSRLIAMKLFSARSVDYFRSASLDDRRYLLFNPMTKAKVTSEGEKVIALLHDVIAAKGYE  364

Query  355  KDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLF  414
            K+T+F   A+ IG LP+LEGTVH+N+GL+ KFMPNYL  P +  P I  R DAADDAF +
Sbjct  365  KNTYFREAAQLIGTLPKLEGTVHVNVGLILKFMPNYLLNP-AEYPEIGPRLDAADDAFFW  423

Query  415  AQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAF  474
            AQGPT G G+++FHDW  +++  + +PNVA   EQ     ELL +A PDAAQQKD+DF  
Sbjct  424  AQGPTRGAGRIQFHDWTKTYEAHSDVPNVARFHEQATALRELLTTAPPDAAQQKDLDFLL  483

Query  475  GVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARF  534
             +G LF+ V Y  LILE+A ++G+D  LID+IF   +RDF+ +AV LHG+S+ T  Q ++
Sbjct  484  DLGHLFSLVVYGHLILEQAAIAGIDRDLIDQIFDFQIRDFSRYAVALHGKSSATEAQQKW  543

Query  535  AMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            A+  +RRPV D  R+ ++W   V   +GAY+M P
Sbjct  544  ALGAIRRPVVDAERFARVWA-QVENYDGAYEMRP  576


>gi|157376479|ref|YP_001475079.1| acyl-CoA dehydrogenase-like protein [Shewanella sediminis HAW-EB3]
 gi|157318853|gb|ABV37951.1| acyl-CoA dehydrogenase-like protein [Shewanella sediminis HAW-EB3]
Length=569

 Score =  622 bits (1604),  Expect = 5e-176, Method: Compositional matrix adjust.
 Identities = 292/569 (52%), Positives = 400/569 (71%), Gaps = 6/569 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            ++LNP   +  + D RS  ++  T+ FFESRGKA+LK DDHER WY+DFL+F  +E++FA
Sbjct  6    LILNPKLESYDHLDPRSKALIKKTIAFFESRGKAKLKTDDHERTWYADFLEFEKKEQLFA  65

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            + LTP  YG +  RWDT+R     E++GFYGL++WY +QV+ LGLGPIW+S NE+AK++A
Sbjct  66   TFLTPEGYGGEGVRWDTFRNCALNEVLGFYGLAHWYTWQVSILGLGPIWISNNEEAKQRA  125

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILT-PSDGGWTANGEKYYIGNANVARMVSTFG  179
            A  L+ G +FAFGLSE+ HGAD+Y TDM LT   DG + A+G KYYIGN N A +VSTFG
Sbjct  126  AQLLDEGGIFAFGLSEKEHGADIYSTDMCLTRQDDGSYLASGSKYYIGNGNKAALVSTFG  185

Query  180  KIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFH  239
            K+  T    EYVFFVADSQH  Y+L++NVVNSQNYVA Y L +YPV +AD+L  G +A+ 
Sbjct  186  KLTDT---DEYVFFVADSQHPNYELVQNVVNSQNYVAEYRLNNYPVAKADVLATGRDAWD  242

Query  240  AALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLI  299
             ALNTVNV K+NLGW +IG+C+HA +E++ HA++R L+   VTDF H+++L  D+Y RL 
Sbjct  243  MALNTVNVGKFNLGWASIGICSHAYFEAINHASHRRLFDHYVTDFFHIKQLFIDSYARLS  302

Query  300  AMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFF  359
            AMKL A R  DYMR A+  DRRYLL++P+ K KVT++GE VI  LWDV+AAKG EK+ +F
Sbjct  303  AMKLFAQRGVDYMRCANPDDRRYLLFTPMVKMKVTTQGEEVINELWDVMAAKGFEKNMYF  362

Query  360  ETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPT  419
            E   R+I  LP+LEGTVH+N+ L+ KFM NY F P +  P  P  D+  +D FLF QG T
Sbjct  363  EMAVRDIRALPKLEGTVHVNMALILKFMANYFFKP-AEYPETPTMDEPVNDTFLFNQGAT  421

Query  420  GGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
             GLGK +FHD+R  ++   +LPNV + ++Q+ +   LL +A P   Q KD DF   +G+L
Sbjct  422  KGLGKTQFHDYRKVYNGV-NLPNVNIFKKQIRLLKILLMAAKPSKEQSKDFDFLLILGEL  480

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            F  V Y QLILE A++  +++ LI++IF  +VRDF+  A++L  + + T  Q     RM+
Sbjct  481  FTLVVYGQLILENAKIKWIEDDLIEQIFDFMVRDFSKFALQLSQKGSATRVQQMICNRMI  540

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            +RP  D AR  ++W+++V  +   Y+M P
Sbjct  541  KRPAVDEARNTRVWENYVYTMKDQYEMNP  569


>gi|320012359|gb|ADW07209.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces 
flavogriseus ATCC 33331]
Length=572

 Score =  620 bits (1600),  Expect = 2e-175, Method: Compositional matrix adjust.
 Identities = 319/569 (57%), Positives = 395/569 (70%), Gaps = 4/569 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            ++ NP      + D  +  ++ AT+D+FESRGK R+  D   R W  DFL+F  +E +FA
Sbjct  5    LIFNPLTYDPAHFDTETRRLLRATIDWFESRGKRRIIEDYRSRAWLGDFLEFSAKEGLFA  64

Query  61   SLLTPAS-YGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            + LTPAS    +D RWDT RI+   EI GFYGL YWY +QVT LGLGP+W S N  A+ +
Sbjct  65   TFLTPASATDREDGRWDTARIAALNEIFGFYGLDYWYAWQVTILGLGPVWQSDNAAARDR  124

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVSTF  178
            AA  L  GEVFAFGLSE+ HGAD+Y TDM+L P  DGG+ A G KYYIGN N A +VS F
Sbjct  125  AAELLSQGEVFAFGLSEKAHGADIYSTDMLLAPDGDGGFLATGSKYYIGNGNAAGLVSVF  184

Query  179  GKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAF  238
            G+         YVFF ADS+H  Y L+KNVV+S  YV+ + L  YPV   D+LH G  AF
Sbjct  185  GRRTDVEGPDGYVFFAADSRHPAYHLVKNVVDSSKYVSEFRLDGYPVGPDDVLHTGRAAF  244

Query  239  HAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRL  298
             AALNTVNV K+NL   +IG+C HA+YE+VTHA NR LYG  VT F HVRR L DAYVRL
Sbjct  245  DAALNTVNVGKFNLCTASIGICEHAMYEAVTHARNRILYGRPVTAFPHVRRELADAYVRL  304

Query  299  IAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTF  358
            + MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDV+AAKG EKDT+
Sbjct  305  VGMKLFSDRAVDYFRSAGPDDRRYLLFNPMTKMKVTTEGEKVIDLMWDVVAAKGFEKDTY  364

Query  359  FETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGP  418
            F   A EI  LP+LEGTVH+N+ L+ KFM N+L  P    PV  R  DAADDAFLF QGP
Sbjct  365  FAQAAVEIRSLPKLEGTVHVNLALILKFMRNHLLDPAGYEPVATRL-DAADDAFLFRQGP  423

Query  419  TGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQ  478
              GLG VRFHDWR +FD  A +PNVA  REQ D   + +A   PD  Q +D+DF   VGQ
Sbjct  424  ARGLGSVRFHDWRPAFDAYAAVPNVARFREQADALCDFVARIAPDERQSRDLDFLLSVGQ  483

Query  479  LFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRM  538
            LFA V + QLILE+ARL+G+DE ++DE+F VLVRDF+ HAVELHG+ + + EQ  +A+  
Sbjct  484  LFALVVHGQLILEQARLTGLDEDVLDELFSVLVRDFSAHAVELHGKDSASGEQQDWAVAA  543

Query  539  VRRPVHDPARYDQIWKDHVLALNGAYQMA  567
            +RRPV D AR  ++W + V AL+GAY+MA
Sbjct  544  IRRPVVDEARSARVW-ERVEALSGAYEMA  571


>gi|229492136|ref|ZP_04385945.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229320924|gb|EEN86736.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
Length=593

 Score =  620 bits (1598),  Expect = 2e-175, Method: Compositional matrix adjust.
 Identities = 312/574 (55%), Positives = 406/574 (71%), Gaps = 10/574 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LL+P+   R   D  +  ++ ATVD+FE+RGK RL  D H++I+YSDFLDF  +E +FA
Sbjct  12   LLLHPSMYDRPEFDATTRRLLGATVDWFEARGKNRLLADYHDKIFYSDFLDFAAKEGLFA  71

Query  61   SLLTPA--SYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPA  S G  D RWDT RI+  +EI+GFYGL+YWYP+QVT LGLGP+W S NE A+ 
Sbjct  72   TFLTPARDSGGDSDKRWDTSRIAALSEILGFYGLNYWYPWQVTILGLGPVWQSDNETARA  131

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS-DGGWTANGEKYYIGNANVARMVST  177
            +AA+ L +G V AFGLSE+ HGADVY TDM+LTP+  GG+ A+G KYYIGN N A  VS 
Sbjct  132  RAASALASGGVAAFGLSEKEHGADVYSTDMVLTPNGSGGYLASGSKYYIGNGNCANTVSV  191

Query  178  FGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEA  237
            FG++ G   + +YVFF ADS H  + ++KN+V +Q YVA ++L DYPV   DILH G  A
Sbjct  192  FGRVDGVEGTDQYVFFYADSDHPAFTVVKNIVPAQMYVAEFSLVDYPVAAEDILHTGEAA  251

Query  238  FHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVR  297
            F AALNTVN+ K+NL +G IGM THALYE++THA NR L+G  VT F HVRR   DAY R
Sbjct  252  FSAALNTVNIGKFNLCFGGIGMSTHALYETITHAHNRILFGNPVTAFPHVRREFVDAYAR  311

Query  298  LIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDT  357
            L+AM+L + RA DY R+AS  DRRYLL++P+TK KVT+E ++VI  L D+ AAKG EKD+
Sbjct  312  LLAMRLFSDRAVDYFRTASPEDRRYLLFNPVTKMKVTTEAQKVIGLLSDIAAAKGFEKDS  371

Query  358  FFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQG  417
            +      ++  LP+LEGTV +N+ L+ KFMP YLFAP+S  P IP R+DAADD FLF QG
Sbjct  372  YLAVAKMDVDGLPKLEGTVAVNLALIAKFMPAYLFAPES-FPAIPTRNDAADDEFLFRQG  430

Query  418  PTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVG  477
            P  GL KVRF DWRA +   A +PNVAL  EQ +    LL  A PDAAQQ D+DF   + 
Sbjct  431  PARGLSKVRFDDWRAVYAKFADVPNVALFVEQAEALVTLLVEAAPDAAQQVDLDFGLAIT  490

Query  478  QLFANVPYAQLILEEARLSGVDE-----ALIDEIFGVLVRDFNTHAVELHGRSATTAEQA  532
            +LF  V Y QLILE+A + G+DE      ++D+IF VLVRDF+  AVEL+G+ + + +Q 
Sbjct  491  ELFTLVVYGQLILEQAEILGLDEGQRNGGVLDQIFDVLVRDFSAAAVELYGKPSASEDQQ  550

Query  533  RFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQM  566
            R A+  +RRP     R++ +W+  V+AL+GAY+M
Sbjct  551  RLALASIRRPTFAAERFEYVWQ-QVVALSGAYEM  583


>gi|45658392|ref|YP_002478.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni 
str. Fiocruz L1-130]
 gi|45601635|gb|AAS71115.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni 
str. Fiocruz L1-130]
Length=566

 Score =  617 bits (1592),  Expect = 1e-174, Method: Compositional matrix adjust.
 Identities = 289/569 (51%), Positives = 393/569 (70%), Gaps = 7/569 (1%)

Query  2    LLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFAS  61
            LLNP     K+ D +S  IM  T+ FFE +GK +LK DD  + WY+DFL+F   E+IFA+
Sbjct  3    LLNPKKTEFKHLDEKSRNIMKRTIAFFEKKGKNKLKEDDRNQTWYADFLEFQKSEKIFAT  62

Query  62   LLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKAA  121
            L+TP+ YG +D RWDT RI +F EI GFYGL YWY +QV+ LGLGPIW S NE+ K K A
Sbjct  63   LMTPSGYGENDSRWDTTRICDFNEIAGFYGLCYWYTWQVSMLGLGPIWNSKNEEIKHKTA  122

Query  122  AGLEAGEVFAFGLSEQTHGADVYQTDMIL-TPSDGGWTANGEKYYIGNANVARMVSTFGK  180
              L  GE+FAFGLSE+ HGAD+  +DM L    +G + ANG KYYIGN+N A +VSTFGK
Sbjct  123  KLLLDGEIFAFGLSEKEHGADLISSDMSLENKGNGNYIANGRKYYIGNSNKAAIVSTFGK  182

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            +  T     YVFF  +S H+ Y+LI+NVVNSQ+YV  YAL+DYP++E +IL +  EA+ A
Sbjct  183  MKDTGN---YVFFAVNSGHKNYELIQNVVNSQSYVGEYALKDYPISEKEILSKDREAWDA  239

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            +L+T+ VCKYNLGW +IG+CTH+ YE++ HA+ R L+   VTDFS ++++  DAY RL +
Sbjct  240  SLSTIAVCKYNLGWASIGICTHSFYEALNHASKRKLFNRNVTDFSQIKQMFVDAYCRLFS  299

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            MKL A+RA DYMRSASA DRRYLL++P+ K KVT +GE VI  LWDVIAAKG EK+ +FE
Sbjct  300  MKLFAARAKDYMRSASATDRRYLLFNPMVKMKVTMQGEEVINLLWDVIAAKGFEKNMYFE  359

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
              A++I  LP+LEGT H+N+ L+ KFM NY F P+S+LPV+P+ DD  +D FLF QG T 
Sbjct  360  MAAKDIRGLPKLEGTAHVNMALIIKFMNNYFFEPNSSLPVVPKIDDFKNDDFLFNQGTTS  419

Query  421  -GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
             G  K+ F D+   +     LPNV + R+Q+ V  E L S  PD+ Q KD+DF   +G+L
Sbjct  420  KGFEKITFRDYNEVYSNI-DLPNVQIFRKQIAVLKEFLKSTPPDSKQSKDLDFMLILGEL  478

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            F  V Y QL++E A +  VD  L+D+IF  +VRD + +A++L+ + ++T EQ    + M+
Sbjct  479  FTLVAYGQLLIENAAIEKVDNDLLDQIFDFMVRDCSKYALQLYSKRSSTKEQMEKCLAMI  538

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQMAP  568
             +P  +   ++++    V +   AY+MAP
Sbjct  539  FKPAENEELFNRVCA-KVYSYKDAYEMAP  566


>gi|328880568|emb|CCA53807.1| acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
Length=574

 Score =  617 bits (1591),  Expect = 2e-174, Method: Compositional matrix adjust.
 Identities = 317/572 (56%), Positives = 394/572 (69%), Gaps = 6/572 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP+     + D  +  ++ ATVD+FE+RGK RL  D   R W  DFL F  +E +F 
Sbjct  5    LLFNPHTYDPAHFDPETRRLLRATVDWFEARGKRRLIEDYRTRAWLGDFLAFSAKEGLFE  64

Query  61   SLLTP---ASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAK  117
            + LTP   A  G  D RWDT RI+   EI+GFYGL YWY +QVT LGLGP+W S N  A+
Sbjct  65   TFLTPSADAPEGQADKRWDTARIAALNEILGFYGLDYWYAWQVTILGLGPVWQSDNAAAR  124

Query  118  RKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS-DGGWTANGEKYYIGNANVARMVS  176
             +AA  L  GEVFAFGLSE+THGAD+Y TDM+L P+ DGG+ A G KYYIGN N A +VS
Sbjct  125  ARAAELLAQGEVFAFGLSEKTHGADIYSTDMLLEPAADGGFRATGSKYYIGNGNAAGLVS  184

Query  177  TFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAE  236
             FG+         YVFF ADS+H  Y L+KNVV+S  +V+ + L DYPV   D+LH G  
Sbjct  185  VFGRRTDVEGPDGYVFFAADSRHPAYHLVKNVVDSSKFVSEFRLEDYPVAAEDVLHTGRA  244

Query  237  AFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYV  296
            AF AALNTVNV K+NL   +IG+C HA+YE+VTHA NR LYG  VT F HVRR L DAYV
Sbjct  245  AFDAALNTVNVGKFNLCTASIGICEHAMYEAVTHAHNRVLYGRPVTAFPHVRRELADAYV  304

Query  297  RLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKD  356
            RL+ MKL + RA DY RSA   DRRYLL++P+TK KVT+EGE+VI  +WDVIAAKG EKD
Sbjct  305  RLVGMKLFSDRAVDYFRSAGPDDRRYLLFNPMTKMKVTTEGEKVIDLMWDVIAAKGFEKD  364

Query  357  TFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQ  416
             +F   A EI  LP+LEGTVH+N+ L+ KFM N+L  P +  PV P R DAADD FLF Q
Sbjct  365  NYFAQAAVEIRGLPKLEGTVHVNLALILKFMRNHLLDPAAYEPV-PTRLDAADDTFLFGQ  423

Query  417  GPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGV  476
            GP  GLG VRFHDWR ++D  A + NVA  REQ D   E + +A PD AQ +D+D    V
Sbjct  424  GPARGLGSVRFHDWRPAYDAYAGVANVARFREQADALCEFVRTAAPDEAQSRDLDLLLAV  483

Query  477  GQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAM  536
            GQLFA V + QL+LE+A L+G+DE ++DE+F VLVRDF+ HAVELHG+ + T +Q  +A+
Sbjct  484  GQLFALVVHGQLVLEQAALTGLDEDVLDELFAVLVRDFSAHAVELHGKDSATEQQQAWAL  543

Query  537  RMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
              VRRPV D  R  ++W+  V AL+  Y+MAP
Sbjct  544  GAVRRPVVDEERSARVWQ-RVEALSDTYEMAP  574


>gi|312139305|ref|YP_004006641.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311888644|emb|CBH47956.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
Length=577

 Score =  617 bits (1590),  Expect = 2e-174, Method: Compositional matrix adjust.
 Identities = 321/574 (56%), Positives = 401/574 (70%), Gaps = 10/574 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LLNP        D  +  ++ AT+ +FESRGK RL  DD   +W  DFLDFVG E++FA
Sbjct  4    LLLNPRDYDPVDLDPNTRRLLRATIAWFESRGKRRLLQDDLHAVWTGDFLDFVGHEKLFA  63

Query  61   SLLTPA--SYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPA  S+G  + RWD  R +  +EI+GFYGL+YWY +QVT LGLGPIWMSAN  A+ 
Sbjct  64   TFLTPAADSHGDPNKRWDAARNAALSEILGFYGLAYWYLWQVTVLGLGPIWMSANAAARE  123

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGG------WTANGEKYYIGNANVA  172
            +AA  L+AG V AFGLSE+ HGADVY TDM+LTP D        + ANG KYYIGN NVA
Sbjct  124  RAAEQLDAGGVMAFGLSEREHGADVYSTDMLLTPQDSAGSGDAVFRANGTKYYIGNGNVA  183

Query  173  RMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILH  232
             MVS FG+      ++ Y+FFV DS+H  Y LI NVV+ Q YV+ +ALRDYPV E DILH
Sbjct  184  GMVSVFGRRTDVEGAEGYMFFVVDSRHLHYRLIDNVVHGQMYVSTFALRDYPVREQDILH  243

Query  233  RGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLT  292
             G +AF AALNTVNV K+NL   +IGMC HA YE++THA NR LYG  VTDF HVR    
Sbjct  244  TGPDAFSAALNTVNVGKFNLCTASIGMCEHAFYEAITHAHNRILYGKRVTDFPHVRANFV  303

Query  293  DAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKG  352
            DAY RLIAMKL ++RA DY RSA   DRRYLL++P+TKAKVTSEGE V+  L DVIAAKG
Sbjct  304  DAYTRLIAMKLFSARAVDYFRSAGPEDRRYLLFNPMTKAKVTSEGETVMALLHDVIAAKG  363

Query  353  VEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAF  412
             EKDT+F   A  IG LP+LEGTVH+N+ L+ KFMPNYLFAP +  P +  R DA DD F
Sbjct  364  YEKDTYFREAAELIGTLPKLEGTVHVNVALILKFMPNYLFAP-AEYPEVGTRTDATDDDF  422

Query  413  LFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDF  472
             + QGP  G GKV+FHDW  ++     +P+VA   EQ   F ELLA+A PD AQ  D+DF
Sbjct  423  FWRQGPARGSGKVQFHDWTRAYVEHGDIPDVARFHEQALAFRELLATAGPDEAQLADLDF  482

Query  473  AFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQA  532
               +G LF  V Y QLILE+A + G+D  L+++IF VL+RDF+ HAV LHG+ ++T  Q 
Sbjct  483  LLTLGHLFELVVYGQLILEQADIVGLDRDLLEQIFDVLIRDFSGHAVALHGKPSSTQAQQ  542

Query  533  RFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQM  566
             +A+ ++R+PV D AR+D++W + V A +GAY+M
Sbjct  543  EWALGVIRKPVVDAARFDRVW-EKVAAYDGAYEM  575


>gi|296140378|ref|YP_003647621.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella 
paurometabola DSM 20162]
 gi|296028512|gb|ADG79282.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola 
DSM 20162]
Length=572

 Score =  615 bits (1586),  Expect = 7e-174, Method: Compositional matrix adjust.
 Identities = 324/571 (57%), Positives = 401/571 (71%), Gaps = 5/571 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L+NP      + D  +  ++ ATV+FFES GK RL   D E  W SDFL+F  RER+FA
Sbjct  4    LLMNPRTTDYAHFDPETRRLLLATVEFFESYGKERLLQADLEAEWVSDFLEFEKRERLFA  63

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPA+Y  G  + RWD  R +  +EI GFYGLSYWY  QVT LGLGPIWMS NE AKR
Sbjct  64   TFLTPAAYADGDPNRRWDGARNAALSEIFGFYGLSYWYAEQVTILGLGPIWMSDNEGAKR  123

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVST  177
             AA  L  G V AFGLSE++HGADVY TDM+LTP +DGG+TA+G KYYIGN NVA MVS 
Sbjct  124  TAAQQLADGGVMAFGLSERSHGADVYNTDMVLTPGADGGFTASGTKYYIGNGNVAGMVSV  183

Query  178  FGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEA  237
            FG+ A     + YVFF ADS+H  Y LI NVV++Q +V+ +AL +YPV   D+LH G EA
Sbjct  184  FGRRADMEGPEAYVFFTADSRHPNYRLIDNVVHAQMFVSTFALEEYPVAPEDVLHTGPEA  243

Query  238  FHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVR  297
            F AALNTVN+ K+NL  GAIG+C HA YES+TH+ NR LYG  VTDFSHVR    DAY R
Sbjct  244  FAAALNTVNIGKFNLCHGAIGICEHAFYESITHSNNRILYGHPVTDFSHVRGNFVDAYAR  303

Query  298  LIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDT  357
            L AMKL + RA DY RSAS  DRRYLL++P+TK+KVTSEGE+V+T L DVIAAKG EK+T
Sbjct  304  LAAMKLFSDRAVDYFRSASLQDRRYLLFNPVTKSKVTSEGEKVVTLLLDVIAAKGYEKNT  363

Query  358  FFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQG  417
            +F    R IG +PRLEGTVH+N+  + KFMPNYL  P +  P I  R DAADDAF FAQG
Sbjct  364  YFHQANRFIGWMPRLEGTVHVNVAQILKFMPNYLLNP-AEYPAIGTRRDAADDAFFFAQG  422

Query  418  PTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVG  477
            P GG GKVRF DW   ++    +PNVA+  EQ      LL +A PDA Q KD+DF   +G
Sbjct  423  PLGGAGKVRFSDWTQPYEDRLDIPNVAVFYEQAQALRTLLQTAAPDAEQSKDLDFVLDIG  482

Query  478  QLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMR  537
             LF+ V Y QL+LE+A L+ +D  ++  IF VL+RDF+ +AV L+G+S+ TA Q  +A+ 
Sbjct  483  HLFSLVVYGQLVLEQAALTDLDRDVLSRIFDVLIRDFSGYAVGLYGKSSATAAQQEWALS  542

Query  538  MVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
             VRRPV D   +D++W+  V A +GAY+M P
Sbjct  543  AVRRPVADQESFDRVWQ-QVAAYDGAYEMRP  572


>gi|24213830|ref|NP_711311.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 
56601]
 gi|24194666|gb|AAN48329.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 
56601]
Length=566

 Score =  615 bits (1585),  Expect = 8e-174, Method: Compositional matrix adjust.
 Identities = 288/569 (51%), Positives = 392/569 (69%), Gaps = 7/569 (1%)

Query  2    LLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFAS  61
            LLNP     K+ D +S  IM  T+ FFE +GK +LK DD  + WY+DFL+F   E+IFA+
Sbjct  3    LLNPKKTEFKHLDEKSRNIMKRTIAFFEKKGKNKLKEDDRNQTWYADFLEFQKSEKIFAT  62

Query  62   LLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKAA  121
            L+TP+ YG +D RWDT RI +F EI GFYGL YWY +QV+ LGLGPIW S NE+ K K A
Sbjct  63   LMTPSGYGENDSRWDTTRICDFNEIAGFYGLCYWYTWQVSMLGLGPIWNSKNEEIKHKTA  122

Query  122  AGLEAGEVFAFGLSEQTHGADVYQTDMIL-TPSDGGWTANGEKYYIGNANVARMVSTFGK  180
              L  GE+FAFGLSE+ HGAD+  +DM L    +G + ANG KYYIGN+N A +VSTFGK
Sbjct  123  KLLLDGEIFAFGLSEKEHGADLISSDMSLENKGNGNYIANGRKYYIGNSNKAAIVSTFGK  182

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            +  T     YVFF  +S H+ Y+LI+NVVNSQ+YV  YAL+DYP++E +IL +  EA+ A
Sbjct  183  MKDTGN---YVFFAVNSGHKNYELIQNVVNSQSYVGEYALKDYPISEKEILSKDREAWDA  239

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIA  300
            +L+T+ VCKYNLGW +IG+CTH+ YE++ HA+ R L+   VTDFS ++++  DAY RL +
Sbjct  240  SLSTIAVCKYNLGWASIGICTHSFYEALNHASKRKLFNRNVTDFSQIKQMFVDAYCRLFS  299

Query  301  MKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFE  360
            MKL A+RA DYMRSASA DRRYLL++P+ K KVT + E VI  LWDVIAAKG EK+ +FE
Sbjct  300  MKLFAARAKDYMRSASATDRRYLLFNPMVKMKVTMQDEEVINLLWDVIAAKGFEKNMYFE  359

Query  361  TVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTG  420
              A++I  LP+LEGT H+N+ L+ KFM NY F P+S+LPV+P+ DD  +D FLF QG T 
Sbjct  360  MAAKDIRGLPKLEGTAHVNMALIIKFMNNYFFEPNSSLPVVPKIDDFKNDDFLFNQGTTS  419

Query  421  -GLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
             G  K+ F D+   +     LPNV + R+Q+ V  E L S  PD+ Q KD+DF   +G+L
Sbjct  420  KGFEKITFRDYNEVYSNI-DLPNVLIFRKQIAVLKEFLKSTPPDSKQSKDLDFMLILGEL  478

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            F  V Y QL++E A +  VD  L+D+IF  +VRD + +A++L+ + ++T EQ    + M+
Sbjct  479  FTLVAYGQLLIENAAIEKVDNDLLDQIFDFMVRDCSKYALQLYSKRSSTKEQMEKCLAMI  538

Query  540  RRPVHDPARYDQIWKDHVLALNGAYQMAP  568
             +P  +   ++++    V +   AY+MAP
Sbjct  539  FKPAENEELFNRVCA-KVYSYKDAYEMAP  566


>gi|325673389|ref|ZP_08153080.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325555410|gb|EGD25081.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
Length=577

 Score =  614 bits (1583),  Expect = 1e-173, Method: Compositional matrix adjust.
 Identities = 320/574 (56%), Positives = 400/574 (70%), Gaps = 10/574 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LLNP        D  +  ++ AT+ +FESRGK RL  DD   +W  DFLDFVG E++FA
Sbjct  4    LLLNPRDYDPVDLDPNTRRLLRATIAWFESRGKRRLLQDDLHAVWTGDFLDFVGHEKLFA  63

Query  61   SLLTPA--SYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            + LTPA  S+G  + RWD  R +  +EI+GFYGL+YWY +QVT LGLGPIWMSAN  A+ 
Sbjct  64   TFLTPAADSHGDPNKRWDAARNAALSEILGFYGLAYWYLWQVTVLGLGPIWMSANAAARE  123

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGG------WTANGEKYYIGNANVA  172
            +AA  L+AG V AFGLSE+ HGADVY TDM+LTP D        + ANG KYYIGN NVA
Sbjct  124  RAAEQLDAGGVMAFGLSEREHGADVYSTDMLLTPQDSAGSGDAVFRANGTKYYIGNGNVA  183

Query  173  RMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILH  232
             MVS FG+      ++ YVFFV DS+H  Y LI NVV+ Q YV+ +ALRDYPV E DILH
Sbjct  184  GMVSVFGRRTDVEGAEGYVFFVVDSRHLHYRLIDNVVHGQMYVSTFALRDYPVREQDILH  243

Query  233  RGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLT  292
             G +AF AALNTVNV K+NL   +IGMC HA YE++THA NR LYG  VTDF H R    
Sbjct  244  TGPDAFSAALNTVNVGKFNLCTASIGMCEHAFYEAITHAHNRILYGKRVTDFPHARANFV  303

Query  293  DAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKG  352
            DAY RLIAMKL ++RA DY RSA   DRRYLL++P+TKAKVTSEGE V+  L DVIAAKG
Sbjct  304  DAYTRLIAMKLFSARAVDYFRSAGPEDRRYLLFNPMTKAKVTSEGETVMALLHDVIAAKG  363

Query  353  VEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAF  412
             EKDT+F   A  IG LP+LEGTVH+N+ L+ KFMPNYLFAP +  P +  R DA DD F
Sbjct  364  YEKDTYFREAAELIGTLPKLEGTVHVNVALILKFMPNYLFAP-AEYPEVGTRTDATDDDF  422

Query  413  LFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDF  472
             + QGP  G GKV+FHDW  ++     +P+VA   EQ   F ELLA+A PD AQ  D+DF
Sbjct  423  FWRQGPPRGSGKVQFHDWTRAYVEHGDIPDVARFHEQALAFRELLATAGPDEAQLADLDF  482

Query  473  AFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQA  532
               +G LF  V Y QLILE+A + G+D  L+++IF VL+RDF+ HAV LHG+ ++T  Q 
Sbjct  483  LLTLGHLFELVVYGQLILEQADIVGLDRDLLEQIFDVLIRDFSGHAVALHGKPSSTQAQQ  542

Query  533  RFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQM  566
             +A+ ++R+PV D AR++++W + V A +GAY+M
Sbjct  543  EWALGVIRKPVVDAARFERVW-EKVAAYDGAYEM  575


>gi|11498109|ref|NP_069334.1| acyl-CoA dehydrogenase [Archaeoglobus fulgidus DSM 4304]
 gi|2650127|gb|AAB90739.1| acyl-coA dehydrogenase (acd-3) [Archaeoglobus fulgidus DSM 4304]
Length=576

 Score =  611 bits (1576),  Expect = 9e-173, Method: Compositional matrix adjust.
 Identities = 293/577 (51%), Positives = 394/577 (69%), Gaps = 13/577 (2%)

Query  2    LLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFAS  61
            LLNP      + D +S EIM  T++FFE+ GKA+LK    +R WY+DFL+F+   +IF +
Sbjct  3    LLNPKKYNGDHLDEKSREIMLKTIEFFENMGKAKLKEKASKREWYADFLEFIKENKIFYT  62

Query  62   LLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRK  119
            L+TP  Y  G  + RWDT+RI +F+E++ FY L YWY +QVT LGLGPIWMS NE  K++
Sbjct  63   LMTPPEYADGDPNVRWDTWRICDFSELLAFYSLDYWYTWQVTVLGLGPIWMSKNEKIKKE  122

Query  120  AAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPS-DGGWTANGEKYYIGNANVARMVSTF  178
             A  L+ G VFAFGLSE+ HGAD+Y T+  L P  DG + A G KYYIGN+NVA ++STF
Sbjct  123  VAELLKNGAVFAFGLSEREHGADIYATETKLVPQPDGTYKAYGRKYYIGNSNVAAIISTF  182

Query  179  GKIAG-------TPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADIL  231
             +IA         P+   + FF      + Y+LIKN+V++Q +V ++ + DYPVTE DIL
Sbjct  183  ARIADPDGSLPDKPDKSRFAFFALRRDEKYYELIKNIVDAQMFVGDFLIHDYPVTEDDIL  242

Query  232  HRGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLL  291
             +G EA+ AALNTVNV K+NLGW +IG+CTHA YE++ HA+ R LYG  VTDF H++RL 
Sbjct  243  EKGEEAWDAALNTVNVGKFNLGWASIGICTHAFYEAINHASKRRLYGMYVTDFPHIKRLF  302

Query  292  TDAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAK  351
             DAY RL+AMKL A RA DYMR AS  DRRYLLYS + K+KVT EGE VI  LWDVIAAK
Sbjct  303  VDAYARLMAMKLFARRACDYMRVASREDRRYLLYSAMVKSKVTREGEEVINLLWDVIAAK  362

Query  352  GVEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDA  411
            G EKDT+FE  AR I  LP+LEGTVH+N+ L+ KF+P YLF P +  P +P+ D    D 
Sbjct  363  GFEKDTYFEMAARHIRALPKLEGTVHVNMALILKFLPKYLFEP-AEFPEVPKMDVPKHDE  421

Query  412  FLFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDID  471
            FLF QGP+GGL +VRFHD++  +D+    PN+ + +EQ+  F E+  +A P   Q +D D
Sbjct  422  FLFNQGPSGGLSQVRFHDYQKVYDSF-DFPNINVFKEQIATFKEMCMAAPPSPEQMRDFD  480

Query  472  FAFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQ  531
            F    G++FA + Y  LILE A++  VD+ L++EIF  ++RDF+  AVEL  + + T +Q
Sbjct  481  FMVTWGEMFALLVYGHLILEAAKIYDVDKDLLEEIFDFMIRDFSKFAVELMAKPSATDKQ  540

Query  532  ARFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
              +A +M++RPV D  R++++ K  V +   AY+M P
Sbjct  541  IEYAKKMIKRPVPDKERFERVVK-KVYSYADAYEMNP  576


>gi|289748000|ref|ZP_06507378.1| acyl-CoA dehydrogenase fadE4 [Mycobacterium tuberculosis 02_1987]
 gi|289688528|gb|EFD56016.1| acyl-CoA dehydrogenase fadE4 [Mycobacterium tuberculosis 02_1987]
Length=408

 Score =  610 bits (1572),  Expect = 3e-172, Method: Compositional matrix adjust.
 Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA
Sbjct  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA
Sbjct  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180
            AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK
Sbjct  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGK  180

Query  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240
            IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA
Sbjct  181  IAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHA  240

Query  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRR  289
            ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRR
Sbjct  241  ALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRR  289


>gi|256375187|ref|YP_003098847.1| acyl-CoA dehydrogenase domain-containing protein [Actinosynnema 
mirum DSM 43827]
 gi|255919490|gb|ACU35001.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 
43827]
Length=587

 Score =  605 bits (1561),  Expect = 6e-171, Method: Compositional matrix adjust.
 Identities = 310/571 (55%), Positives = 394/571 (70%), Gaps = 8/571 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +LL+P+     + D  S  ++ A VD+FE RGK RL  DD  ++WYS+FL+F  RE++FA
Sbjct  22   VLLDPHRYDAAHLDDESRRLLRAVVDWFEQRGKRRLIADDQAKVWYSEFLEFAAREKLFA  81

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
            +  TPA    G  D RWDT R +  +E++GFYGL YWY +QVT LGLGPIWMS N  A++
Sbjct  82   TFCTPACEADGNPDKRWDTARNAALSEVLGFYGLQYWYAWQVTVLGLGPIWMSGNAVARK  141

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTP-SDGGWTANGEKYYIGNANVARMVST  177
            +AA  L+ G VFAFGLSE+ HGADVY TD++LTP  DGG+ A+G KYYIGN NVA MVS 
Sbjct  142  RAAELLDDGAVFAFGLSEKEHGADVYSTDLVLTPDGDGGFRASGSKYYIGNGNVAGMVSV  201

Query  178  FGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEA  237
            FG+ A       Y FF ADSQH  + L+KNVV+SQ +V+ + LRDYPVT  D+LH G EA
Sbjct  202  FGRRADLEGPDAYAFFAADSQHPAFHLVKNVVDSQMFVSEFELRDYPVTADDLLHTGQEA  261

Query  238  FHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVR  297
            F AALNTVNV K+NL   +IG+C HA +E++THA NR LYG  VT F HVR+   DAY R
Sbjct  262  FSAALNTVNVGKFNLCTASIGICEHAFHEAITHAHNRVLYGKPVTAFPHVRQNFVDAYAR  321

Query  298  LIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDT  357
            L AMKL + RA DY RSAS  DRRYLL++P+TK KVT+EGERV+  LWDVIAAKG EKDT
Sbjct  322  LAAMKLFSDRAVDYFRSASPDDRRYLLFNPITKMKVTTEGERVVDLLWDVIAAKGFEKDT  381

Query  358  FFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQG  417
            +F   AR+I  LP+LEGTVH+N+ L+ KF+PNYLF+P    P +P R D ADDAF + QG
Sbjct  382  YFSMAARDIRALPKLEGTVHVNLALVLKFLPNYLFSPADDYPPVPTRHDPADDAFFWEQG  441

Query  418  PTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVG  477
            P  GLG +RF DW   +   + +PNVA   E+     EL         Q+ D+D    +G
Sbjct  442  PARGLGAIRFADWEEPYRAASDVPNVARFHERARALRELRVL----DGQRGDLDLLLSLG  497

Query  478  QLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMR  537
             LF  V Y QL+LE+A L+GVD  L+D++F VLVRDF   AV LHG+SA+T EQ  +A+ 
Sbjct  498  HLFTLVVYGQLVLEQAALTGVDRDLVDQVFDVLVRDFAAGAVALHGKSASTPEQQAWALA  557

Query  538  MVRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
             V +PV D  R+D++W+  V  L+GAY+M P
Sbjct  558  QVVKPVVDGERFDRVWQ-RVEGLSGAYEMRP  587


>gi|333920713|ref|YP_004494294.1| hypothetical protein AS9A_3047 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333482934|gb|AEF41494.1| hypothetical protein AS9A_3047 [Amycolicicoccus subflavus DQS3-9A1]
Length=570

 Score =  605 bits (1560),  Expect = 6e-171, Method: Compositional matrix adjust.
 Identities = 294/570 (52%), Positives = 391/570 (69%), Gaps = 7/570 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            +L NP      + D  + E++A+T+++FE+RG  RL  D H +++Y +FLDFV  +++FA
Sbjct  6    LLFNPTTYNPGHFDDETRELLASTIEWFETRGLRRLTEDFHRKVFYQEFLDFVAEKQLFA  65

Query  61   SLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKR  118
              LTP       +  RWDT R++  +EI+GFYGL+YWYP+QV  LGLGP+W S N  A++
Sbjct  66   KFLTPEGQPGAVEGARWDTARVAALSEILGFYGLNYWYPWQVAVLGLGPVWQSDNPAARK  125

Query  119  KAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTF  178
              A  L  GEV AFGLSE+ HGADVY T M LTP+D G+ ANG KYYIGN N AR VS F
Sbjct  126  TTALSLAEGEVAAFGLSEKEHGADVYSTSMRLTPTDEGYVANGGKYYIGNGNCARTVSVF  185

Query  179  GKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAF  238
            G+I       EYVFF ADS H  ++LIKNVV SQ YVA + L DYPVTE DILHRG +AF
Sbjct  186  GRI-DHENDHEYVFFRADSTHPAFELIKNVVPSQMYVAEFRLNDYPVTEDDILHRGDDAF  244

Query  239  HAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRL  298
             AA+NTVNV K+NL +G +G+CTHA YE++THA+NR LYG+ VT   HVR    D+Y RL
Sbjct  245  SAAMNTVNVGKFNLCFGGVGLCTHAFYEAITHASNRVLYGSAVTTMPHVRTQFIDSYARL  304

Query  299  IAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTF  358
            + M+L + RA DY R+ASA DRRYLLY+ +TK KVT+E E VI  L D++AAKG EKD +
Sbjct  305  LGMRLFSDRAIDYFRTASADDRRYLLYNAVTKMKVTTEAEAVIGGLADIVAAKGFEKDNY  364

Query  359  FETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGP  418
            F     ++  LP+LEGTV +N+ L+ KFMP YLF+P + L  +P R +AA+D FLF QGP
Sbjct  365  FTIAVNDVRGLPKLEGTVAVNLALINKFMPAYLFSP-ADLDEVPTRLEAANDDFLFRQGP  423

Query  419  TGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQ  478
              GLGKVRFHDWR ++   AH+PNVA+ +EQ+D FA +L  +TP   Q  D+DF   VGQ
Sbjct  424  ARGLGKVRFHDWRPTYKAAAHIPNVAVFQEQIDTFASMLTESTPTKEQIGDMDFMLAVGQ  483

Query  479  LFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRM  538
            LF  + Y  LILE+A++ G+D+ ++++IF  LVRDF++ A++L+ +   T EQ +  +  
Sbjct  484  LFTFLVYGHLILEQAKIKGIDDVVVNQIFSTLVRDFSSGALDLYSKPLATDEQQKRMISA  543

Query  539  VRRPVHDPARYDQIWKDHVLALNGAYQMAP  568
            +RRP         IW + +  L+GAY M P
Sbjct  544  IRRPA--AGDDSPIW-EAITGLSGAYAMRP  570


>gi|262202500|ref|YP_003273708.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis 
DSM 43247]
 gi|262085847|gb|ACY21815.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 
43247]
Length=571

 Score =  595 bits (1534),  Expect = 6e-168, Method: Compositional matrix adjust.
 Identities = 322/571 (57%), Positives = 395/571 (70%), Gaps = 9/571 (1%)

Query  1    MLLNPNHLTRKYP--DRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERI  58
            +LLNP   T  YP  D  +  ++ AT+DFFES GK RL   D    W +DFL+F  +E++
Sbjct  3    LLLNP--ATDHYPQFDAETRRLLRATIDFFESYGKQRLLQADLNAEWVADFLEFEKKEKL  60

Query  59   FASLLTPASY--GADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDA  116
            FA+ LTP++Y  G  + RWD  R +  +EI GF+GL+YWY  QVT LGLGPIWMS NE A
Sbjct  61   FATFLTPSAYADGEGNRRWDAARNAALSEIFGFFGLAYWYAEQVTILGLGPIWMSDNEIA  120

Query  117  KRKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSD-GGWTANGEKYYIGNANVARMV  175
            K +AA  L  G V AFGLSE++HGADVY TDMILT  D GG+TA+G KYYIGN NVA MV
Sbjct  121  KTRAARQLIDGGVMAFGLSERSHGADVYSTDMILTDDDAGGFTASGTKYYIGNGNVAGMV  180

Query  176  STFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGA  235
            S FG+ A     + YVFFV DS+H  Y LI NVV+ Q +V+ +AL DYPV+  DILH G 
Sbjct  181  SVFGRRADVEGPEGYVFFVVDSRHPNYRLIDNVVHGQMFVSTFALDDYPVSADDILHTGP  240

Query  236  EAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAY  295
            EAF AALNTVNV K+NL  G+IGMCTH+L+E++THA NR LYG  VTDFSHVR    DA+
Sbjct  241  EAFAAALNTVNVGKFNLCHGSIGMCTHSLFEAITHADNRILYGNPVTDFSHVRSNFVDAF  300

Query  296  VRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEK  355
             RL AMKL + RA DY RSAS  DRRYLL++P+TK+KVTSEGE V+T L DV+AAKG EK
Sbjct  301  ARLSAMKLFSDRAVDYFRSASLEDRRYLLFNPVTKSKVTSEGETVMTLLLDVVAAKGYEK  360

Query  356  DTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFA  415
            +T+F    R IG LPRLEGTVH+N+G + KFMPNYLF P    P I  R DAADDAF FA
Sbjct  361  NTYFHQANRFIGWLPRLEGTVHVNVGQILKFMPNYLFGP-VDYPEIGTRLDAADDAFFFA  419

Query  416  QGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFG  475
            QGP GG GKVRF DW   +     +PNVA+  EQ      LL +A P   QQKD+DF   
Sbjct  420  QGPVGGAGKVRFADWTKPYTARTDVPNVAVFYEQATALQTLLETAAPSPEQQKDLDFVLT  479

Query  476  VGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFA  535
            VG LF  V Y QLILE+A ++ +D  L+++IF V +RDF+ HAV L+G+   T EQ  +A
Sbjct  480  VGHLFTLVVYGQLILEQAAITELDADLLNQIFDVQIRDFSGHAVTLYGKPTATPEQQDWA  539

Query  536  MRMVRRPVHDPARYDQIWKDHVLALNGAYQM  566
            +R VRRPV     + ++W+  V AL G Y+M
Sbjct  540  LRAVRRPVVGADSFGRVWQ-QVKALAGTYEM  569


>gi|269103330|ref|ZP_06156027.1| acyl-CoA dehydrogenase [Photobacterium damselae subsp. damselae 
CIP 102761]
 gi|268163228|gb|EEZ41724.1| acyl-CoA dehydrogenase [Photobacterium damselae subsp. damselae 
CIP 102761]
Length=563

 Score =  592 bits (1527),  Expect = 5e-167, Method: Compositional matrix adjust.
 Identities = 276/566 (49%), Positives = 390/566 (69%), Gaps = 9/566 (1%)

Query  1    MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFA  60
            ML NP      Y D+ + ++M   +DFFE++G   +K D H+++W  +F+DF+   ++ A
Sbjct  1    MLFNPQKHNFHYKDQETQQLMQKVIDFFEAKGLKSIKKDWHDKVWNYEFVDFMKDNQVLA  60

Query  61   SLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKA  120
            +L+TP  YG    RWDTYR ++FAEI+GFYG++YWY FQV+ LG+ P+W+ +NE+ K KA
Sbjct  61   TLMTPEGYGDPSARWDTYRNTKFAEIIGFYGITYWYTFQVSMLGVAPVWLGSNEELKHKA  120

Query  121  AAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGW-TANGEKYYIGNANVARMVSTFG  179
            A  L+ G V AFGLSE+ HGAD+Y ++M L     G+   +G KYYIGN N A +VSTFG
Sbjct  121  AQLLQEGHVCAFGLSEKEHGADIYSSEMKLVDKGNGYFEGSGSKYYIGNGNEAGLVSTFG  180

Query  180  KIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFH  239
            K+     S +YVFFV DS+H +Y  +KN VN Q +V+ Y +  YP+T  DI  RG +A+ 
Sbjct  181  KVEN---SDDYVFFVVDSKHPQYTCVKNTVNEQIHVSEYTINHYPITAEDISERGQKAWD  237

Query  240  AALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLI  299
              LNT+N+CK+NLG+ +IG+C HA YE++ HAA+R++YG  VTDF H++RL  DAY RL 
Sbjct  238  DMLNTINICKFNLGFASIGLCEHAFYEAINHAAHRNIYGKYVTDFPHIQRLFADAYARLC  297

Query  300  AMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFF  359
            AMKL + RA DYMRSAS  DRRYLL++P+ K KVTS+GE VI  LWDVIAAKG E++ FF
Sbjct  298  AMKLFSERACDYMRSASQDDRRYLLFNPMVKMKVTSQGEEVINHLWDVIAAKGFEQEPFF  357

Query  360  ETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPT  419
            ET A EI +LP+LEGTVH+N+ L+ KFM NYLF P    PVIP RDD A+D FLF QGPT
Sbjct  358  ETAAHEIRMLPKLEGTVHVNMALVVKFMQNYLFNP-KDYPVIPHRDDVANDDFLFNQGPT  416

Query  420  GGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQL  479
             GLGK++FHD++ ++D    L NV + ++Q+  F + L   +P   Q +D+D+   +G+ 
Sbjct  417  RGLGKIQFHDYQQTYDAVK-LENVEIFKQQIAAFKDYLLHHSPSQDQARDVDYILAMGEC  475

Query  480  FANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMV  539
            F  + Y  LILE A+    ++ LI+EIF VLVRD + +A+ L  + ++T+ Q   A+R++
Sbjct  476  FTLIVYGHLILERAQHLATEDILINEIFDVLVRDMSHYALTLANKPSSTSGQYS-ALRLI  534

Query  540  R-RPVHDPARYDQIWKDHVLALNGAY  564
            + +P HD  R+  +W+  + +L+G Y
Sbjct  535  QHKPHHDQERFKALWQS-IYSLSGTY  559



Lambda     K      H
   0.322    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1273897611594




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40