BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0236c Length=1400 Score E Sequences producing significant alignments: (Bits) Value gi|15607377|ref|NP_214750.1| transmembrane protein [Mycobacteriu... 2715 0.0 gi|15839616|ref|NP_334653.1| hypothetical protein MT0247 [Mycoba... 2713 0.0 gi|306779068|ref|ZP_07417405.1| conserved membrane protein [Myco... 2711 0.0 gi|289445768|ref|ZP_06435512.1| conserved membrane protein [Myco... 2711 0.0 gi|254549176|ref|ZP_05139623.1| transmembrane protein [Mycobacte... 2711 0.0 gi|344218054|gb|AEM98684.1| transmembrane protein [Mycobacterium... 2710 0.0 gi|148821429|ref|YP_001286183.1| transmembrane protein [Mycobact... 2710 0.0 gi|294994710|ref|ZP_06800401.1| putative transmembrane protein [... 2710 0.0 gi|31791413|ref|NP_853906.1| transmembrane protein [Mycobacteriu... 2709 0.0 gi|340625273|ref|YP_004743725.1| hypothetical protein MCAN_02421... 2708 0.0 gi|308371623|ref|ZP_07425547.2| conserved membrane protein [Myco... 2693 0.0 gi|289568139|ref|ZP_06448366.1| conserved hypothetical protein [... 2321 0.0 gi|240168460|ref|ZP_04747119.1| transmembrane protein [Mycobacte... 2089 0.0 gi|342859290|ref|ZP_08715944.1| hypothetical protein MCOL_10438 ... 2051 0.0 gi|3063877|emb|CAA18562.1| putative integral membrane protein [M... 2029 0.0 gi|15828384|ref|NP_302647.1| integral membrane protein [Mycobact... 2024 0.0 gi|41409784|ref|NP_962620.1| hypothetical protein MAP3686c [Myco... 1999 0.0 gi|118466978|ref|YP_884044.1| hypothetical protein MAV_4923 [Myc... 1998 0.0 gi|336460132|gb|EGO39038.1| F5/8 type C domain-containing protei... 1996 0.0 gi|118616877|ref|YP_905209.1| transmembrane protein [Mycobacteri... 1988 0.0 gi|296167517|ref|ZP_06849869.1| transmembrane protein [Mycobacte... 1979 0.0 gi|183980524|ref|YP_001848815.1| transmembrane protein [Mycobact... 1972 0.0 gi|333988858|ref|YP_004521472.1| transmembrane protein [Mycobact... 1865 0.0 gi|315442006|ref|YP_004074885.1| F5/8 type C domain-containing p... 1811 0.0 gi|118469359|ref|YP_884772.1| hypothetical protein MSMEG_0359 [M... 1805 0.0 gi|108797206|ref|YP_637403.1| hypothetical protein Mmcs_0226 [My... 1787 0.0 gi|126432829|ref|YP_001068520.1| hypothetical protein Mjls_0216 ... 1771 0.0 gi|120401279|ref|YP_951108.1| putative transmembrane protein [My... 1705 0.0 gi|289441612|ref|ZP_06431356.1| LOW QUALITY PROTEIN: transmembra... 1677 0.0 gi|145221022|ref|YP_001131700.1| hypothetical protein Mflv_0418 ... 1643 0.0 gi|289764352|ref|ZP_06523730.1| integral membrane protein [Mycob... 1611 0.0 gi|169631546|ref|YP_001705195.1| hypothetical protein MAB_4472 [... 1593 0.0 gi|229494120|ref|ZP_04387883.1| putative membrane protein [Rhodo... 1325 0.0 gi|226304602|ref|YP_002764560.1| hypothetical protein RER_11130 ... 1315 0.0 gi|312141425|ref|YP_004008761.1| integral membrane protein [Rhod... 1304 0.0 gi|226364652|ref|YP_002782434.1| hypothetical protein ROP_52420 ... 1303 0.0 gi|325673154|ref|ZP_08152847.1| transmembrane protein [Rhodococc... 1301 0.0 gi|111022159|ref|YP_705131.1| hypothetical protein RHA1_ro05192 ... 1297 0.0 gi|54027444|ref|YP_121686.1| hypothetical protein nfa54700 [Noca... 1177 0.0 gi|343924455|ref|ZP_08764004.1| hypothetical protein GOALK_016_0... 1103 0.0 gi|262204280|ref|YP_003275488.1| hypothetical protein Gbro_4462 ... 1101 0.0 gi|333921772|ref|YP_004495353.1| hypothetical protein AS9A_4119 ... 1087 0.0 gi|296394563|ref|YP_003659447.1| coagulation factor 5/8 type dom... 1087 0.0 gi|317508100|ref|ZP_07965784.1| hypothetical protein HMPREF9336_... 1081 0.0 gi|296138155|ref|YP_003645398.1| coagulation factor 5/8 type dom... 1055 0.0 gi|298527629|ref|ZP_07015038.1| predicted protein [Mycobacterium... 1037 0.0 gi|289760342|ref|ZP_06519720.1| transmembrane protein [Mycobacte... 1035 0.0 gi|326385229|ref|ZP_08206894.1| hypothetical protein SCNU_19897 ... 1011 0.0 gi|254820650|ref|ZP_05225651.1| hypothetical protein MintA_12016... 936 0.0 gi|254820590|ref|ZP_05225591.1| hypothetical protein MintA_11716... 909 0.0 >gi|15607377|ref|NP_214750.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|148660000|ref|YP_001281523.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|306774326|ref|ZP_07412663.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] 7 more sequence titles Length=1400 Score = 2715 bits (7037), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1399/1400 (99%), Positives = 1400/1400 (100%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|15839616|ref|NP_334653.1| hypothetical protein MT0247 [Mycobacterium tuberculosis CDC1551] gi|253797159|ref|YP_003030160.1| hypothetical protein TBMG_00237 [Mycobacterium tuberculosis KZN 1435] gi|289552488|ref|ZP_06441698.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] 16 more sequence titles Length=1400 Score = 2713 bits (7032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1398/1400 (99%), Positives = 1399/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|306779068|ref|ZP_07417405.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306782857|ref|ZP_07421179.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306791781|ref|ZP_07430083.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] 11 more sequence titles Length=1400 Score = 2711 bits (7027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1397/1400 (99%), Positives = 1398/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATV SAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVISAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|289445768|ref|ZP_06435512.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289418726|gb|EFD15927.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length=1400 Score = 2711 bits (7027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1397/1400 (99%), Positives = 1399/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDK+VAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKQVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|254549176|ref|ZP_05139623.1| transmembrane protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=1400 Score = 2711 bits (7027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1397/1400 (99%), Positives = 1398/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAW APQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWAAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|344218054|gb|AEM98684.1| transmembrane protein [Mycobacterium tuberculosis CTRI-2] Length=1400 Score = 2710 bits (7025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1397/1400 (99%), Positives = 1398/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLP MLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPKMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|148821429|ref|YP_001286183.1| transmembrane protein [Mycobacterium tuberculosis F11] gi|148719956|gb|ABR04581.1| conserved transmembrane protein [Mycobacterium tuberculosis F11] Length=1400 Score = 2710 bits (7025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1397/1400 (99%), Positives = 1398/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLL VGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLTVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|294994710|ref|ZP_06800401.1| putative transmembrane protein [Mycobacterium tuberculosis 210] gi|326905991|gb|EGE52924.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|339293300|gb|AEJ45411.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] gi|339296946|gb|AEJ49056.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=1400 Score = 2710 bits (7024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1397/1400 (99%), Positives = 1398/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 GGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 VGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|31791413|ref|NP_853906.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|121636148|ref|YP_976371.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988621|ref|YP_002643308.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31616998|emb|CAD93105.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121491795|emb|CAL70257.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771734|dbj|BAH24540.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600164|emb|CCC62833.1| probable conserved transmembrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1400 Score = 2709 bits (7022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1396/1400 (99%), Positives = 1398/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTAL+VSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALVVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTL LPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLALPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|340625273|ref|YP_004743725.1| hypothetical protein MCAN_02421 [Mycobacterium canettii CIPT 140010059] gi|340003463|emb|CCC42583.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=1400 Score = 2708 bits (7020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1396/1400 (99%), Positives = 1397/1400 (99%), Gaps = 0/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIG LLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGQLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 V AVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VSAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS Sbjct 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT Sbjct 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 Query 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV Sbjct 1321 ALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISV 1380 Query 1381 SVVAASVVATSESRGQDRMQ 1400 SVVAASVVATSESRGQDRMQ Sbjct 1381 SVVAASVVATSESRGQDRMQ 1400 >gi|308371623|ref|ZP_07425547.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308336128|gb|EFP24979.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] Length=1390 Score = 2693 bits (6980), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1387/1390 (99%), Positives = 1388/1390 (99%), Gaps = 0/1390 (0%) Query 11 VVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP 70 +VGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP Sbjct 1 MVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP 60 Query 71 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP 130 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP Sbjct 61 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP 120 Query 131 RVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIAT 190 RVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIAT Sbjct 121 RVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIAT 180 Query 191 LAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG 250 LAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG Sbjct 181 LAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG 240 Query 251 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA 310 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA Sbjct 241 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA 300 Query 311 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL 370 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL Sbjct 301 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL 360 Query 371 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG 430 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG Sbjct 361 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG 420 Query 431 ALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDS 490 ALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDS Sbjct 421 ALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDS 480 Query 491 IPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLH 550 IPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLH Sbjct 481 IPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLH 540 Query 551 RSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATD 610 RSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATD Sbjct 541 RSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATD 600 Query 611 QLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYG 670 QLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYG Sbjct 601 QLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYG 660 Query 671 RVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPA 730 RVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPA Sbjct 661 RVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPA 720 Query 731 SAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIE 790 SAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIE Sbjct 721 SAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIE 780 Query 791 TVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGF 850 TVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGF Sbjct 781 TVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGF 840 Query 851 AHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLS 910 AHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLS Sbjct 841 AHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLS 900 Query 911 RTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPAT 970 RTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPAT Sbjct 901 RTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPAT 960 Query 971 AWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQ 1030 AWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQ Sbjct 961 AWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQ 1020 Query 1031 VGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPAD 1090 VGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL AGGAPIAPAD Sbjct 1021 VGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLGAGGAPIAPAD 1080 Query 1091 AARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQ 1150 AARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQ Sbjct 1081 AARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQ 1140 Query 1151 ELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPES 1210 ELLISPGAAFVVDGAQLSTPGAGLSSATV SAETGAWGPTHREVRVPESATSRVLVVPES Sbjct 1141 ELLISPGAAFVVDGAQLSTPGAGLSSATVISAETGAWGPTHREVRVPESATSRVLVVPES 1200 Query 1211 INSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPL 1270 INSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPL Sbjct 1201 INSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPL 1260 Query 1271 LALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRR 1330 LALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRR Sbjct 1261 LALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRR 1320 Query 1331 RERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVAT 1390 RERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVAT Sbjct 1321 RERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVAT 1380 Query 1391 SESRGQDRMQ 1400 SESRGQDRMQ Sbjct 1381 SESRGQDRMQ 1390 >gi|289568139|ref|ZP_06448366.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289541892|gb|EFD45541.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=1210 Score = 2321 bits (6016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1193/1196 (99%), Positives = 1194/1196 (99%), Gaps = 0/1196 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA Sbjct 1 MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV Sbjct 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA Sbjct 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP Sbjct 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT Sbjct 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET Sbjct 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN Sbjct 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD Sbjct 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTD 660 Query 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD Sbjct 661 TPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV Sbjct 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL Sbjct 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA Sbjct 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMA 900 Query 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSA 960 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAA STTRASGDSDLVDILGSA Sbjct 901 LAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAALSTTRASGDSDLVDILGSA 960 Query 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL Sbjct 961 YAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 Query 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLS 1080 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL Sbjct 1021 GDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLG 1080 Query 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER Sbjct 1081 AGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRV 1196 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRV Sbjct 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRV 1196 >gi|240168460|ref|ZP_04747119.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=1410 Score = 2089 bits (5413), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1149/1400 (83%), Positives = 1237/1400 (89%), Gaps = 6/1400 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 + PL R+WL +VGAV+L LTFAQSPG+VSPDTKLDLTANPLRFLARATNLWNS+LPFGQ+ Sbjct 1 MTPLPRRWLLLVGAVSLTLTFAQSPGRVSPDTKLDLTANPLRFLARATNLWNSELPFGQS 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFF+ GHLLG+PGW+TQRLWWAVLLTVGFWGLLRVAEALG+G P+SRV Sbjct 61 QNQAYGYLFPHGTFFLTGHLLGIPGWITQRLWWAVLLTVGFWGLLRVAEALGIGSPASRV 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 VGA AFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVR LAAQAG+AVA Sbjct 121 VGAAAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRTLAAQAGVAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIW ACHRPNRLWWRYTAWWL+A+ LATLWWV+AL+QL GVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWLACHRPNRLWWRYTAWWLVALVLATLWWVVALSQLRGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAP+ATAGAPLVTGS AILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPDATAGAPLVTGSVAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGL SPAMPARGRLVTMLLVGVVLLAVG+ GGL SP+AH VQ FLDA G+PLRNVHK+GP Sbjct 301 AGLASPAMPARGRLVTMLLVGVVLLAVGYSGGLGSPLAHQVQVFLDAGGSPLRNVHKLGP 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIRLPLVLG+A+LL R+PLPGSAPR WLRA AHPERDKRVAV +V LTAL VSTSLAW Sbjct 361 VIRLPLVLGIAELLGRIPLPGSAPRSEWLRAVAHPERDKRVAVGIVVLTALAVSTSLAWA 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GR+ PPGTF A+P+YWQEAADWL H+ TP PGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRLTPPGTFRAIPRYWQEAADWLSAHNTGTPMPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 G PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISY+++RNDLDPET Sbjct 481 GSSPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYLVLRNDLDPET 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIY----RVS 596 SRSARPIL+HR+IAGSPGLAK+AEFG PVGP LAGFV+DSGLRPRYPA+EIY RV Sbjct 541 SRSARPILVHRAIAGSPGLAKVAEFGTPVGPGSLAGFVSDSGLRPRYPAVEIYRVIHRVG 600 Query 597 APANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQV 656 GAPYF TD + RVDGGPEVLLRLDERRRL GQP LGPVLMTADARAAGLP P V Sbjct 601 ESLAAGAPYFVDTDSVLRVDGGPEVLLRLDERRRLSGQPGLGPVLMTADARAAGLPAPLV 660 Query 657 AVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSS 716 VTDTPVARETDYGRVD HSSAIRAPGDAR TYNRVPDYPVPGA+ V GGWTGGR+TVSS Sbjct 661 IVTDTPVARETDYGRVDQHSSAIRAPGDARRTYNRVPDYPVPGADLVYGGWTGGRVTVSS 720 Query 717 SSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPS 776 SSAD+TAMPDVAPA++ AAA+DGD ATAWVSNALQAAVGQWLQVDFD PV NAV+TLTPS Sbjct 721 SSADSTAMPDVAPATSAAAAIDGDSATAWVSNALQAAVGQWLQVDFDHPVANAVITLTPS 780 Query 777 ATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFG 836 ATAVGAQ+RRIL+ET GSTTLRFDEAGKPLTAALPYGETPWVR TAAA DDGSAGVQFG Sbjct 781 ATAVGAQIRRILVETATGSTTLRFDEAGKPLTAALPYGETPWVRVTAAAADDGSAGVQFG 840 Query 837 ITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCA 896 ITDLAITQYDASGFAHPVQL HTV VPGPP S IA WDLGSELLGRPGCAP PD VRCA Sbjct 841 ITDLAITQYDASGFAHPVQLHHTVSVPGPPADSTIARWDLGSELLGRPGCAPAPDSVRCA 900 Query 897 ASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDI 956 ASMALAPEEP N SRTLTVPRP +VTP VWVRPRQGPKLADLIA P TTRA GDSD++D+ Sbjct 901 ASMALAPEEPVNFSRTLTVPRPTTVTPTVWVRPRQGPKLADLIAEPDTTRAHGDSDVLDV 960 Query 957 LGSAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVV 1016 LGSAYAA DGDPATAWTAPQRVVQ+K+PPTLTL+LPRPT V GLRL SRS LPAHPT+V Sbjct 961 LGSAYAATDGDPATAWTAPQRVVQYKSPPTLTLSLPRPTEVAGLRLLPSRSALPAHPTMV 1020 Query 1017 AINLGDGPQVRQL-QVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAE 1075 A++LGDGPQVR + GE TL LHPRVTDTV+VSLLDW+D+IDRNALGFDQLKPPGLAE Sbjct 1021 AVDLGDGPQVRAVNHDGEPQTLSLHPRVTDTVTVSLLDWEDIIDRNALGFDQLKPPGLAE 1080 Query 1076 VVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAA 1135 V L A +PIAPADA RNR+R +TVDC+HGPV+AVAGRFVHTSIRTTVGALLD EPVAA Sbjct 1081 VTALGADLSPIAPADAVRNRSREITVDCEHGPVIAVAGRFVHTSIRTTVGALLDAEPVAA 1140 Query 1136 LPCEREPIALPAGQQELLISPGAAFVVDGAQLSTPGAG-LSSATVTSAETGAWGPTHREV 1194 LPCE EPI+LP GQQELLISPGA FVVDGAQL+ PGA L + T A TG WGP+ REV Sbjct 1141 LPCEDEPISLPPGQQELLISPGAEFVVDGAQLTAPGAAELPTTTTVPASTGVWGPSRREV 1200 Query 1195 RVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPN 1254 R P SA SRVLV+PESIN GWVART +GARLT + VNGWQQ WVVPAG+PGTITLTFAPN Sbjct 1201 RTPASARSRVLVIPESINPGWVARTGSGARLTAVVVNGWQQGWVVPAGDPGTITLTFAPN 1260 Query 1255 SLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAG 1314 S+YR+ LA GL LLP LALLAFWR R+ L PW PG AA VLAAGA IA AG Sbjct 1261 SVYRSGLAFGLTLLPALALLAFWRRRRKDLGHAAVRPWVPGPLAAVAVLAAGAAIAGAAG 1320 Query 1315 VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQL 1374 V V+G AL +RY LR RERL +TVGL+AGGL+LAGA LSRHPWRSVDGYAG+ ASVQL Sbjct 1321 VAVVGAALALRYVLRDRERLLGWITVGLSAGGLMLAGAVLSRHPWRSVDGYAGHSASVQL 1380 Query 1375 LALISVSVVAASVVATSESR 1394 LALIS++V+AASV + R Sbjct 1381 LALISLAVLAASVSMRARDR 1400 >gi|342859290|ref|ZP_08715944.1| hypothetical protein MCOL_10438 [Mycobacterium colombiense CECT 3035] gi|342133531|gb|EGT86734.1| hypothetical protein MCOL_10438 [Mycobacterium colombiense CECT 3035] Length=1399 Score = 2051 bits (5314), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1115/1393 (81%), Positives = 1216/1393 (88%), Gaps = 6/1393 (0%) Query 4 LSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQ 63 +SR+WL +VGA+ALALTFAQSPG++SPDTKLDLTANPLRFL+RATNLWNS+LPFGQAQNQ Sbjct 1 MSRRWLWLVGAIALALTFAQSPGRISPDTKLDLTANPLRFLSRATNLWNSELPFGQAQNQ 60 Query 64 AYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGA 123 AYGYLFPHGTFF++GH LGVPGW+TQRLWWA+LLTVGFWGLLRVAEAL +G P+SR++ A Sbjct 61 AYGYLFPHGTFFLVGHALGVPGWITQRLWWALLLTVGFWGLLRVAEALRIGSPASRLLAA 120 Query 124 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMG 183 AFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALR GRSVRALA QAGLA+ALMG Sbjct 121 TAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRAGGGRSVRALAGQAGLAIALMG 180 Query 184 AVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFL 243 AVNAIAT AGCLPAVIWWACHRPNRLWWRYT WWL+A+ LATLWWVMAL L +SPPFL Sbjct 181 AVNAIATAAGCLPAVIWWACHRPNRLWWRYTGWWLVALVLATLWWVMALVMLRAISPPFL 240 Query 244 DFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGL 303 DFIESSGVTTQWSSLVE+LRGT+SWTP+VAP ATAGAPLVTGSAA+LGTCLVAAAGLAGL Sbjct 241 DFIESSGVTTQWSSLVEMLRGTESWTPYVAPTATAGAPLVTGSAAVLGTCLVAAAGLAGL 300 Query 304 TSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIR 363 A PARGRLVTMLLVGVVL+A G+ GGL SPVAH VQAFLDA G PLRNVHK+G VIR Sbjct 301 AGRATPARGRLVTMLLVGVVLMAAGYSGGLGSPVAHAVQAFLDAGGAPLRNVHKLGSVIR 360 Query 364 LPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRV 423 +P+VLGLAQLL R+PLPGSAP P WLRAFAHPERDKR+A A+V +TALMVSTSLAWTGR+ Sbjct 361 IPVVLGLAQLLGRIPLPGSAPMPVWLRAFAHPERDKRLATAIVVVTALMVSTSLAWTGRL 420 Query 424 APPGTFGALPQYWQEAADWLRTHHAA---TPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 APPGTF A+PQYW EAADWL H+A+ TP PGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 APPGTFTAIPQYWHEAADWLTEHNASRAGTPPPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 G PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYV +RNDLDP+T Sbjct 481 GSSPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVALRNDLDPDT 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN 600 SRSARPIL+HR+I GSPGL K+A+FGAPVGP LAGFV DSGLRPRYPA+EIYRV ++ Sbjct 541 SRSARPILVHRAIDGSPGLHKVAQFGAPVGPGTLAGFVADSGLRPRYPAVEIYRVGDESD 600 Query 601 PGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLP-VPQVAVT 659 PG PYF TD+LARVDGGPE LLRLDERRRL GQPPLGP L+ ADAR AGLP V +T Sbjct 601 PGTPYFVDTDRLARVDGGPEALLRLDERRRLLGQPPLGPALLAADARGAGLPPDAAVTIT 660 Query 660 DTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSA 719 DTPVARETDYGRVD HSSAIRAPGDARHTYNRVPDYPVPGA+PV G WTGGRITVSSSS+ Sbjct 661 DTPVARETDYGRVDQHSSAIRAPGDARHTYNRVPDYPVPGADPVTGAWTGGRITVSSSSS 720 Query 720 DATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATA 779 D+TAMPDVAPA++PAAA+DGD ATAWVSN+LQAAVGQW+++DFD PVTNA +TLTPSATA Sbjct 721 DSTAMPDVAPATSPAAAIDGDSATAWVSNSLQAAVGQWMRIDFDHPVTNAAITLTPSATA 780 Query 780 VGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITD 839 VGAQVRRILIET GSTTLRFDE GKPL AALPYGETPWVR TAA TDDGSAGVQFGITD Sbjct 781 VGAQVRRILIETATGSTTLRFDEPGKPLAAALPYGETPWVRITAAGTDDGSAGVQFGITD 840 Query 840 LAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASM 899 L+ITQYDASGFAH V LRHTV VPGPPPGS IAGWDLGSELLGRPGCA PDGVRCA SM Sbjct 841 LSITQYDASGFAHQVDLRHTVRVPGPPPGSPIAGWDLGSELLGRPGCAAAPDGVRCAPSM 900 Query 900 ALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGS 959 ALAPEEP N SRTLTVP P+SVTP VWVRPRQGPKLADLI P+TT A GDSD VD+LGS Sbjct 901 ALAPEEPVNFSRTLTVPAPMSVTPTVWVRPRQGPKLADLITEPNTTVAHGDSDTVDVLGS 960 Query 960 AYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAIN 1019 AYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPT VTG+RL SRS LP HPT+VA+N Sbjct 961 AYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTEVTGVRLTPSRSALPTHPTMVAVN 1020 Query 1020 LGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL 1079 LGDGPQ L+ T+ L PRVTDTV++SLL+W DVIDRNALGFDQLKPPGLAEV L Sbjct 1021 LGDGPQAAALKPDGAQTVPLRPRVTDTVTISLLNWQDVIDRNALGFDQLKPPGLAEVAAL 1080 Query 1080 SAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCE 1139 A G PIAPADAARNR R ++V CD GPVVAVAGRFVHT+I TTVGA+LD PVAA+PCE Sbjct 1081 GADGKPIAPADAARNRTREISVGCDRGPVVAVAGRFVHTAIHTTVGAILDDAPVAAVPCE 1140 Query 1140 REPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPES 1199 REPIALPAGQQELLISPGA FVVDGA+L+ A + + + AWGP REV+ P S Sbjct 1141 REPIALPAGQQELLISPGAQFVVDGAELTARAATDVARPLRVSPWRAWGPDRREVQAPAS 1200 Query 1200 ATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRA 1259 SRVLVVPESIN GWVARTSTGARLTPI VNGWQQ W+VPAG+PGTITLTFA NSLYRA Sbjct 1201 PNSRVLVVPESINPGWVARTSTGARLTPIVVNGWQQGWLVPAGDPGTITLTFASNSLYRA 1260 Query 1260 SLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMG 1319 LA+GLALLPLLA+LA WR+ R+ D P PWRPG WAA LAA VIA + GV V+G Sbjct 1261 GLAVGLALLPLLAMLALWRSRRKDDGDEPARPWRPGPWAAVPALAAAGVIAGLGGVAVLG 1320 Query 1320 TALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALIS 1379 ALG+RYALRR +R++V +AGGLILAGA LSRHPWRS DGYAG+ A+VQLLALIS Sbjct 1321 AALGLRYALRREA--WERLSVVGSAGGLILAGAVLSRHPWRSPDGYAGHSAAVQLLALIS 1378 Query 1380 VSVVAASVVATSE 1392 ++V+AASVVA E Sbjct 1379 LAVLAASVVALPE 1391 >gi|3063877|emb|CAA18562.1| putative integral membrane protein [Mycobacterium leprae] Length=1440 Score = 2029 bits (5256), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1087/1379 (79%), Positives = 1190/1379 (87%), Gaps = 6/1379 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 VA +SR WL +VG VA+ALTFAQSPGQ+SPDTKLDLT NPLRFLARATNLWNSDLPFGQ Sbjct 36 VAAMSRWWLVLVGVVAVALTFAQSPGQISPDTKLDLTTNPLRFLARATNLWNSDLPFGQV 95 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFF+IG LLG PGW+TQRLWWA+LLT GFWGLLRVAE L +G P+SR Sbjct 96 QNQAYGYLFPHGTFFLIGQLLGSPGWITQRLWWALLLTAGFWGLLRVAETLSIGSPTSRA 155 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 +GAVAFALSPRVLTTLGSISSETLPMML+PWVLLPTILAL+G GRSVR AAQAGLAVA Sbjct 156 IGAVAFALSPRVLTTLGSISSETLPMMLSPWVLLPTILALQGAPGRSVRTRAAQAGLAVA 215 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYT WWLLA+ LATLWWV+AL LHGVSP Sbjct 216 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTGWWLLALCLATLWWVVALVLLHGVSP 275 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVE+LRGTDSWTPFVA ATAG PLVT S AILGTCLVAAAGL Sbjct 276 PFLDFIESSGVTTQWSSLVEMLRGTDSWTPFVAQTATAGTPLVTESVAILGTCLVAAAGL 335 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGL S MPARGRLVTML++GVVLL+ G+ GGL SP+A VQAFLD++G LRNVHK+ Sbjct 336 AGLASTGMPARGRLVTMLVIGVVLLSAGYSGGLGSPLAQAVQAFLDSSGAALRNVHKLES 395 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIR P LG+A LL R+PLPGSAP WL +FAHPERDKRVA V LTAL+VSTS AWT Sbjct 396 VIRTPFALGIAGLLGRIPLPGSAPVLVWLSSFAHPERDKRVAATVAVLTALLVSTSSAWT 455 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GR+ PPGTF A+PQYW + +DWL H+ PTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 456 GRLTPPGTFSAIPQYWHDTSDWLSEHNTGIPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 515 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 G+ PWGVRDSIPLTPPQ IRALDSVQRLFA+GRPS GLADTLARQGISYV++RNDLDP+T Sbjct 516 GNSPWGVRDSIPLTPPQAIRALDSVQRLFASGRPSVGLADTLARQGISYVVLRNDLDPDT 575 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYR--VSAP 598 SRSARPIL+HR+IAGSP L K+A+FGAPVG + L GFV DS LRP YPA+EIYR VS Sbjct 576 SRSARPILVHRAIAGSPQLEKVAQFGAPVGTNMLKGFVADSELRPWYPAVEIYRVAVSDG 635 Query 599 ANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVP---Q 655 NPG PYFA TDQL R+DGGPEVLLRLDERRRL GQP LGP LMTADA+ AGLP+P + Sbjct 636 TNPGKPYFADTDQLPRIDGGPEVLLRLDERRRLLGQPALGPALMTADAQFAGLPLPSRAE 695 Query 656 VAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVS 715 V +TDTPVARETDYGRVD HSSAIRA DARHT+NRVPDYPVPGAE V GGW+GGRIT S Sbjct 696 VTITDTPVARETDYGRVDQHSSAIRAVNDARHTFNRVPDYPVPGAEMVFGGWSGGRITAS 755 Query 716 SSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTP 775 SSS+DAT+MPDVAPA++PAAA+DGDPAT+WVSNALQ AVGQWLQVDFD PV NAV+T+TP Sbjct 756 SSSSDATSMPDVAPATSPAAAIDGDPATSWVSNALQPAVGQWLQVDFDHPVNNAVITVTP 815 Query 776 SATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQF 835 SATAVGAQVRRI IETVNG+T LR DEAGKPL ALPYGETPWVR TAAATDDGS+GVQF Sbjct 816 SATAVGAQVRRIEIETVNGTTNLRVDEAGKPLAVALPYGETPWVRITAAATDDGSSGVQF 875 Query 836 GITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRC 895 GITDL ITQYDASGFAHPV LRHT LVPG PPG A+AGWDLGSELLGRPGCAP PD VRC Sbjct 876 GITDLTITQYDASGFAHPVNLRHTALVPGSPPGWAVAGWDLGSELLGRPGCAPAPDNVRC 935 Query 896 AASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVD 955 AASM LAPEEP N SRTLTVP P+SVT M+WVRPRQGPKLADLIA P TTRA G++D VD Sbjct 936 AASMTLAPEEPVNFSRTLTVPYPISVTAMLWVRPRQGPKLADLIAEPKTTRAYGEADTVD 995 Query 956 ILGSAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTV 1015 ILGSAYAA DG+PAT+WTAPQRVVQHKTPPTLTL LPRPT V GLRLA SRS LPA PT+ Sbjct 996 ILGSAYAATDGNPATSWTAPQRVVQHKTPPTLTLVLPRPTEVNGLRLAPSRSALPARPTL 1055 Query 1016 VAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAE 1075 VA+NLG+GPQVR+LQ GE L L PR+TDTV++SLLDW DVIDRNALGFDQLKPPGLAE Sbjct 1056 VAVNLGNGPQVRELQAGEPQALSLKPRITDTVTISLLDWHDVIDRNALGFDQLKPPGLAE 1115 Query 1076 VVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAA 1135 V VL G PIAPA+A+RNR R +TVDCDHGP++AVAGRFVHTSIRTT ALLDGEPVAA Sbjct 1116 VTVLGTDGNPIAPANASRNRIREVTVDCDHGPIIAVAGRFVHTSIRTTAAALLDGEPVAA 1175 Query 1136 LPCEREPIALPAGQQELLISPGAAFVVDGAQLSTP-GAGLSSATVTSAETGAWGPTHREV 1194 +PCER PI LPAGQQELLISPGAAF+VDGAQLST G L SA SA+TG WGP+ REV Sbjct 1176 VPCERAPIVLPAGQQELLISPGAAFIVDGAQLSTQDGTELPSARTISADTGKWGPSRREV 1235 Query 1195 RVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPN 1254 R P SATS+VLV+P+SIN GWVA TSTG RL P+AVNGWQQ W+VPAGNPGTITLTF N Sbjct 1236 RAPGSATSQVLVMPDSINPGWVAHTSTGVRLMPVAVNGWQQGWLVPAGNPGTITLTFTAN 1295 Query 1255 SLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAG 1314 SLYR LA GLALLPLLALLA W + AD PW PGAW+A VL+AGAVIA AG Sbjct 1296 SLYRPGLAAGLALLPLLALLALWGRRNERAADAAAQPWTPGAWSAVAVLSAGAVIAGAAG 1355 Query 1315 VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQ 1373 V+V+G AL +RYALR ++R R+ +TVGL+AGGL+LAGAALSR PWRSVDGY+G+ A+VQ Sbjct 1356 VVVVGAALSLRYALRHQQRWRNGLTVGLSAGGLVLAGAALSRQPWRSVDGYSGHSANVQ 1414 >gi|15828384|ref|NP_302647.1| integral membrane protein [Mycobacterium leprae TN] gi|221230861|ref|YP_002504277.1| putative integral membrane protein [Mycobacterium leprae Br4923] gi|13093814|emb|CAC32102.1| possible integral membrane protein [Mycobacterium leprae] gi|219933968|emb|CAR72670.1| possible integral membrane protein [Mycobacterium leprae Br4923] Length=1405 Score = 2024 bits (5243), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1086/1379 (79%), Positives = 1190/1379 (87%), Gaps = 6/1379 (0%) Query 1 VAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQA 60 +A +SR WL +VG VA+ALTFAQSPGQ+SPDTKLDLT NPLRFLARATNLWNSDLPFGQ Sbjct 1 MAAMSRWWLVLVGVVAVALTFAQSPGQISPDTKLDLTTNPLRFLARATNLWNSDLPFGQV 60 Query 61 QNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRV 120 QNQAYGYLFPHGTFF+IG LLG PGW+TQRLWWA+LLT GFWGLLRVAE L +G P+SR Sbjct 61 QNQAYGYLFPHGTFFLIGQLLGSPGWITQRLWWALLLTAGFWGLLRVAETLSIGSPTSRA 120 Query 121 VGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVA 180 +GAVAFALSPRVLTTLGSISSETLPMML+PWVLLPTILAL+G GRSVR AAQAGLAVA Sbjct 121 IGAVAFALSPRVLTTLGSISSETLPMMLSPWVLLPTILALQGAPGRSVRTRAAQAGLAVA 180 Query 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSP 240 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYT WWLLA+ LATLWWV+AL LHGVSP Sbjct 181 LMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTGWWLLALCLATLWWVVALVLLHGVSP 240 Query 241 PFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGL 300 PFLDFIESSGVTTQWSSLVE+LRGTDSWTPFVA ATAG PLVT S AILGTCLVAAAGL Sbjct 241 PFLDFIESSGVTTQWSSLVEMLRGTDSWTPFVAQTATAGTPLVTESVAILGTCLVAAAGL 300 Query 301 AGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGP 360 AGL S MPARGRLVTML++GVVLL+ G+ GGL SP+A VQAFLD++G LRNVHK+ Sbjct 301 AGLASTGMPARGRLVTMLVIGVVLLSAGYSGGLGSPLAQAVQAFLDSSGAALRNVHKLES 360 Query 361 VIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWT 420 VIR P LG+A LL R+PLPGSAP WL +FAHPERDKRVA V LTAL+VSTS AWT Sbjct 361 VIRTPFALGIAGLLGRIPLPGSAPVLVWLSSFAHPERDKRVAATVAVLTALLVSTSSAWT 420 Query 421 GRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 GR+ PPGTF A+PQYW + +DWL H+ PTPGRVLVVPGAPFATQVWGTSHDEPLQVL Sbjct 421 GRLTPPGTFSAIPQYWHDTSDWLSEHNTGIPTPGRVLVVPGAPFATQVWGTSHDEPLQVL 480 Query 481 GDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPET 540 G+ PWGVRDSIPLTPPQ IRALDSVQRLFA+GRPS GLADTLARQGISYV++RNDLDP+T Sbjct 481 GNSPWGVRDSIPLTPPQAIRALDSVQRLFASGRPSVGLADTLARQGISYVVLRNDLDPDT 540 Query 541 SRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYR--VSAP 598 SRSARPIL+HR+IAGSP L K+A+FGAPVG + L GFV DS LRP YPA+EIYR VS Sbjct 541 SRSARPILVHRAIAGSPQLEKVAQFGAPVGTNMLKGFVADSELRPWYPAVEIYRVAVSDG 600 Query 599 ANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVP---Q 655 NPG PYFA TDQL R+DGGPEVLLRLDERRRL GQP LGP LMTADA+ AGLP+P + Sbjct 601 TNPGKPYFADTDQLPRIDGGPEVLLRLDERRRLLGQPALGPALMTADAQFAGLPLPSRAE 660 Query 656 VAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVS 715 V +TDTPVARETDYGRVD HSSAIRA DARHT+NRVPDYPVPGAE V GGW+GGRIT S Sbjct 661 VTITDTPVARETDYGRVDQHSSAIRAVNDARHTFNRVPDYPVPGAEMVFGGWSGGRITAS 720 Query 716 SSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTP 775 SSS+DAT+MPDVAPA++PAAA+DGDPAT+WVSNALQ AVGQWLQVDFD PV NAV+T+TP Sbjct 721 SSSSDATSMPDVAPATSPAAAIDGDPATSWVSNALQPAVGQWLQVDFDHPVNNAVITVTP 780 Query 776 SATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQF 835 SATAVGAQVRRI IETVNG+T LR DEAGKPL ALPYGETPWVR TAAATDDGS+GVQF Sbjct 781 SATAVGAQVRRIEIETVNGTTNLRVDEAGKPLAVALPYGETPWVRITAAATDDGSSGVQF 840 Query 836 GITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRC 895 GITDL ITQYDASGFAHPV LRHT LVPG PPG A+AGWDLGSELLGRPGCAP PD VRC Sbjct 841 GITDLTITQYDASGFAHPVNLRHTALVPGSPPGWAVAGWDLGSELLGRPGCAPAPDNVRC 900 Query 896 AASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVD 955 AASM LAPEEP N SRTLTVP P+SVT M+WVRPRQGPKLADLIA P TTRA G++D VD Sbjct 901 AASMTLAPEEPVNFSRTLTVPYPISVTAMLWVRPRQGPKLADLIAEPKTTRAYGEADTVD 960 Query 956 ILGSAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTV 1015 ILGSAYAA DG+PAT+WTAPQRVVQHKTPPTLTL LPRPT V GLRLA SRS LPA PT+ Sbjct 961 ILGSAYAATDGNPATSWTAPQRVVQHKTPPTLTLVLPRPTEVNGLRLAPSRSALPARPTL 1020 Query 1016 VAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAE 1075 VA+NLG+GPQVR+LQ GE L L PR+TDTV++SLLDW DVIDRNALGFDQLKPPGLAE Sbjct 1021 VAVNLGNGPQVRELQAGEPQALSLKPRITDTVTISLLDWHDVIDRNALGFDQLKPPGLAE 1080 Query 1076 VVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAA 1135 V VL G PIAPA+A+RNR R +TVDCDHGP++AVAGRFVHTSIRTT ALLDGEPVAA Sbjct 1081 VTVLGTDGNPIAPANASRNRIREVTVDCDHGPIIAVAGRFVHTSIRTTAAALLDGEPVAA 1140 Query 1136 LPCEREPIALPAGQQELLISPGAAFVVDGAQLSTP-GAGLSSATVTSAETGAWGPTHREV 1194 +PCER PI LPAGQQELLISPGAAF+VDGAQLST G L SA SA+TG WGP+ REV Sbjct 1141 VPCERAPIVLPAGQQELLISPGAAFIVDGAQLSTQDGTELPSARTISADTGKWGPSRREV 1200 Query 1195 RVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPN 1254 R P SATS+VLV+P+SIN GWVA TSTG RL P+AVNGWQQ W+VPAGNPGTITLTF N Sbjct 1201 RAPGSATSQVLVMPDSINPGWVAHTSTGVRLMPVAVNGWQQGWLVPAGNPGTITLTFTAN 1260 Query 1255 SLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAG 1314 SLYR LA GLALLPLLALLA W + AD PW PGAW+A VL+AGAVIA AG Sbjct 1261 SLYRPGLAAGLALLPLLALLALWGRRNERAADAAAQPWTPGAWSAVAVLSAGAVIAGAAG 1320 Query 1315 VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQ 1373 V+V+G AL +RYALR ++R R+ +TVGL+AGGL+LAGAALSR PWRSVDGY+G+ A+VQ Sbjct 1321 VVVVGAALSLRYALRHQQRWRNGLTVGLSAGGLVLAGAALSRQPWRSVDGYSGHSANVQ 1379 >gi|41409784|ref|NP_962620.1| hypothetical protein MAP3686c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398616|gb|AAS06236.1| hypothetical protein MAP_3686c [Mycobacterium avium subsp. paratuberculosis K-10] Length=1393 Score = 1999 bits (5178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1095/1395 (79%), Positives = 1203/1395 (87%), Gaps = 9/1395 (0%) Query 11 VVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP 70 +VGA+ALALTFAQSPG++SPDTKLDLTANPLRFLARATNLWNS+LPFGQAQNQAYGYLFP Sbjct 3 LVGAIALALTFAQSPGRISPDTKLDLTANPLRFLARATNLWNSELPFGQAQNQAYGYLFP 62 Query 71 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP 130 HGTFF+IGH LGVPGW+TQRLWWA+LLTVGFWGLLRVAEALG+G P SRV+ A AFALSP Sbjct 63 HGTFFLIGHALGVPGWITQRLWWALLLTVGFWGLLRVAEALGIGSPGSRVIAAAAFALSP 122 Query 131 RVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIAT 190 RVLTTLGSISSETLPMMLAPWVLLPTILALR T RSVRALAAQAG+AVALMGAVNAIAT Sbjct 123 RVLTTLGSISSETLPMMLAPWVLLPTILALRATGPRSVRALAAQAGVAVALMGAVNAIAT 182 Query 191 LAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG 250 +AGCLPAVIWWACHRPNRLWWRYT WWL+A+ LATLWWV+ L L +SPPFLDFIESSG Sbjct 183 VAGCLPAVIWWACHRPNRLWWRYTGWWLVALVLATLWWVVGLVMLRAISPPFLDFIESSG 242 Query 251 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA 310 VTTQWSSLVE+LRGTDSWTP+VAP ATAGAPLVTGSAA+LGTCLVAAAGLAGL P MPA Sbjct 243 VTTQWSSLVEMLRGTDSWTPYVAPTATAGAPLVTGSAAVLGTCLVAAAGLAGLAGPTMPA 302 Query 311 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL 370 RGRLVTMLLVGVVL+A G+ GGL SP AH VQAFLDA G PLRNVHK+G VIR+P+VLG+ Sbjct 303 RGRLVTMLLVGVVLMAAGYSGGLGSPAAHAVQAFLDAGGAPLRNVHKLGSVIRIPIVLGV 362 Query 371 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG 430 AQLL R+PLPGSAP+ WL AFAHPERDKRVA AVV LTALMVSTSLAWTGR+ PPGTF Sbjct 363 AQLLGRIPLPGSAPKSLWLSAFAHPERDKRVATAVVVLTALMVSTSLAWTGRLTPPGTFT 422 Query 431 ALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDS 490 A+P YWQ+ ADWL H+ + TPGRVLV PGAPFATQVWGTSHDEPLQVLG PWGVRDS Sbjct 423 AIPPYWQQTADWLTQHNTGSSTPGRVLVAPGAPFATQVWGTSHDEPLQVLGASPWGVRDS 482 Query 491 IPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLH 550 IPLTPPQTIRALDSVQRLFAAGRPS GLADTLARQGISYV+VRNDL P+TSRSARPIL+H Sbjct 483 IPLTPPQTIRALDSVQRLFAAGRPSLGLADTLARQGISYVVVRNDLAPDTSRSARPILVH 542 Query 551 RSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATD 610 R++ GSPGL K+A+FGAPVGP +AGFV DSGLRPRYPA+E+YRV A + G PYF TD Sbjct 543 RAVDGSPGLHKVAQFGAPVGPGTVAGFVADSGLRPRYPAVEVYRVDAGGDAGTPYFVDTD 602 Query 611 QLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQ---VAVTDTPVARET 667 ++AR+DGGPEVLLRLDERRRL GQPPLGP L+TADARAAGLP+P V VTDTPVARET Sbjct 603 RMARIDGGPEVLLRLDERRRLLGQPPLGPALLTADARAAGLPLPAGAGVTVTDTPVARET 662 Query 668 DYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDV 727 DYGRVD HSSAIRAPGDARHTYNRVPDYPVPGA+PV+G WTGGRITVSSS++D+TAMPDV Sbjct 663 DYGRVDQHSSAIRAPGDARHTYNRVPDYPVPGADPVLGAWTGGRITVSSSASDSTAMPDV 722 Query 728 APASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRI 787 APA++PAAA+DGDPATAWVSN+LQ+AVGQW+Q+DFD PVTNA +TLTPSATAVGAQVRRI Sbjct 723 APATSPAAAIDGDPATAWVSNSLQSAVGQWMQIDFDHPVTNAALTLTPSATAVGAQVRRI 782 Query 788 LIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDA 847 LIET GSTTLRFD+ GKPL AALPYGETPW+R TAA TDDGS GVQFGITDL +TQYDA Sbjct 783 LIETATGSTTLRFDQPGKPLAAALPYGETPWLRITAAGTDDGSPGVQFGITDLTVTQYDA 842 Query 848 SGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPA 907 SGFAHPV LRHTV VPGPPP S I W+LG EL GRPGCA PD VRCA SM LAPEEP Sbjct 843 SGFAHPVDLRHTVRVPGPPPESPITRWELGPELPGRPGCARAPDSVRCAPSMELAPEEPV 902 Query 908 NLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGD 967 SRTLTVP P SVTP VWVRPRQGPKLADLI P+TT A GDSD VD+LGSAYAA DGD Sbjct 903 TFSRTLTVPAPTSVTPTVWVRPRQGPKLADLITEPNTTVAHGDSDTVDVLGSAYAATDGD 962 Query 968 PATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVR 1027 PATAWTAPQRVVQHKTPPTLTLTLPRPT V G+RL SR+ LPAHPT+VA+NLGDGPQV Sbjct 963 PATAWTAPQRVVQHKTPPTLTLTLPRPTQVAGVRLVPSRAALPAHPTMVAVNLGDGPQVT 1022 Query 1028 QLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIA 1087 ++ G+ T+ L PRVTDTV++SLLDW+DVIDRNALGFDQLKPPGLAEV L A G PI Sbjct 1023 AVKPGQAQTIPLKPRVTDTVTISLLDWEDVIDRNALGFDQLKPPGLAEVAALGADGNPIG 1082 Query 1088 PADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPA 1147 PADA RNRAR ++V C+ GPV+AVAGRFVHT+I TTVGALLD +PVAA+PCER+PIALPA Sbjct 1083 PADAGRNRAREVSVGCERGPVIAVAGRFVHTAIHTTVGALLDDQPVAAVPCERDPIALPA 1142 Query 1148 GQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVV 1207 GQQELLISPGA FVVDGA+LSTP A ++ V A WGP RE+ S TSR+LV+ Sbjct 1143 GQQELLISPGAQFVVDGAELSTPAAAEAAQPVRVASWRGWGPDRREIAAGPSNTSRILVI 1202 Query 1208 PESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLAL 1267 PESIN GWVART +GARLTPIAVNGWQQ W+VPAG+PG ITL+FA NSLYRA LA+GLAL Sbjct 1203 PESINPGWVARTGSGARLTPIAVNGWQQGWLVPAGDPGVITLSFASNSLYRAGLAVGLAL 1262 Query 1268 LPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYA 1327 LP+LALLA WRT +R D P PWRPG WAA LAAGAVIA AGV V+G ALG+RYA Sbjct 1263 LPVLALLACWRTRKRGTHDPPARPWRPGVWAAVPALAAGAVIAGAAGVAVLGAALGLRYA 1322 Query 1328 LRRRERLRDRVTVGLA--AGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAA 1385 L R R +G+A AGGLILAGAALSR PWRSVDGYAG+ VQLLALIS++ + A Sbjct 1323 LGARRWAR----LGMAGSAGGLILAGAALSRQPWRSVDGYAGHAGYVQLLALISLAALTA 1378 Query 1386 SVVATSESRGQDRMQ 1400 SVVA RG R + Sbjct 1379 SVVAVPRRRGGARHE 1393 >gi|118466978|ref|YP_884044.1| hypothetical protein MAV_4923 [Mycobacterium avium 104] gi|118168265|gb|ABK69162.1| conserved hypothetical protein [Mycobacterium avium 104] Length=1393 Score = 1998 bits (5176), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1094/1395 (79%), Positives = 1203/1395 (87%), Gaps = 9/1395 (0%) Query 11 VVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP 70 +VGA+ALALTFAQSPG++SPDTKLDLTANPLRFLARATNLWNS+LPFGQAQNQAYGYLFP Sbjct 3 LVGAIALALTFAQSPGRISPDTKLDLTANPLRFLARATNLWNSELPFGQAQNQAYGYLFP 62 Query 71 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP 130 HGTFF+IGH LGVPGW+TQRLWWA+LLTVGFWGLLRVAEALG+G P SRV+ A AFALSP Sbjct 63 HGTFFLIGHALGVPGWITQRLWWALLLTVGFWGLLRVAEALGIGSPGSRVIAAAAFALSP 122 Query 131 RVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIAT 190 RVLTTLGSISSETLPMMLAPWVLLPTILALR T RSVRALAAQAG+AVALMGAVNAIAT Sbjct 123 RVLTTLGSISSETLPMMLAPWVLLPTILALRATGPRSVRALAAQAGVAVALMGAVNAIAT 182 Query 191 LAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG 250 +AGCLPAVIWWACHRPNRLWWRYT WWL+A+ LATLWWV+ L L +SPPFLDFIESSG Sbjct 183 VAGCLPAVIWWACHRPNRLWWRYTGWWLVALVLATLWWVVGLVMLRAISPPFLDFIESSG 242 Query 251 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA 310 VTTQWSSLVE+LRGTDSWTP+VAP ATAGAPLVTGSAA+LGTCLVAAAGLAGL P MPA Sbjct 243 VTTQWSSLVEMLRGTDSWTPYVAPTATAGAPLVTGSAAVLGTCLVAAAGLAGLAGPTMPA 302 Query 311 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL 370 RGRLVTMLL+GVVL+A G+ GGL SP AH VQAFLDA G PLRNVHK+G VIR+P+VLG+ Sbjct 303 RGRLVTMLLIGVVLMAAGYSGGLGSPAAHAVQAFLDAGGAPLRNVHKLGSVIRIPIVLGV 362 Query 371 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG 430 AQLL R+PLPGSAP+ WL AFAHPERDKRVA AVV LTALMVSTSLAWTGR+ PPGTF Sbjct 363 AQLLGRIPLPGSAPKSLWLSAFAHPERDKRVATAVVVLTALMVSTSLAWTGRLTPPGTFT 422 Query 431 ALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDS 490 A+P YWQ+ ADWL H+ +PTPGRVLV PGAPFATQVWGTSHDEPLQVLG PWGVRDS Sbjct 423 AIPPYWQQTADWLTQHNTGSPTPGRVLVAPGAPFATQVWGTSHDEPLQVLGASPWGVRDS 482 Query 491 IPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLH 550 IPLTPPQTIRALDSVQRLFAAGRPS GLADTLARQGISYV+VRNDLDP+TSRSARPIL+H Sbjct 483 IPLTPPQTIRALDSVQRLFAAGRPSLGLADTLARQGISYVVVRNDLDPDTSRSARPILVH 542 Query 551 RSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATD 610 R++ GSPGL K+A+FGAPVGP +AGFV DSGLRPRYPA+E+YRV A + G PYF TD Sbjct 543 RAVDGSPGLHKVAQFGAPVGPGTVAGFVADSGLRPRYPAVEVYRVDAGGDAGTPYFVDTD 602 Query 611 QLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQ---VAVTDTPVARET 667 ++AR+DGGPEVLLRLDERRRL GQPPLGP L+TADARAAGLP+P V VTDTPVARET Sbjct 603 RMARIDGGPEVLLRLDERRRLLGQPPLGPALLTADARAAGLPLPAGAGVTVTDTPVARET 662 Query 668 DYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDV 727 DYGRVD HSSAIRAPGDARHTYNRVPDYPVPGA+PV+G WTGGRITVSSS++D+TAMPDV Sbjct 663 DYGRVDQHSSAIRAPGDARHTYNRVPDYPVPGADPVLGAWTGGRITVSSSASDSTAMPDV 722 Query 728 APASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRI 787 APA++PAAA+DGDPATAWVSN+LQ+AVGQW+Q+DFD PVTNA +TLTPSATAVGAQVRRI Sbjct 723 APATSPAAAIDGDPATAWVSNSLQSAVGQWMQIDFDHPVTNAALTLTPSATAVGAQVRRI 782 Query 788 LIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDA 847 LIET GSTTLRFD+ GKPL AALPYGETPW+R TAA TDDGS GVQFGITDL +TQYDA Sbjct 783 LIETATGSTTLRFDQPGKPLAAALPYGETPWLRITAAGTDDGSPGVQFGITDLTVTQYDA 842 Query 848 SGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPA 907 SGFAHPV LRHTV VPGPPP S I W+LG EL GRPGCA PD VRCA SM LAPEEP Sbjct 843 SGFAHPVDLRHTVRVPGPPPESPITRWELGPELPGRPGCARAPDSVRCAPSMELAPEEPV 902 Query 908 NLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGD 967 SRTLTVP P SVTP VWVRPRQGPKLADLI P+TT A GDSD VD+LGSAYAA D D Sbjct 903 TFSRTLTVPAPTSVTPTVWVRPRQGPKLADLITEPNTTVAHGDSDTVDVLGSAYAATDDD 962 Query 968 PATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVR 1027 PATAWTAPQRVVQHKTPPTLTLTLPRPT V G+RL SR+ LPAHPT+VA+NLGDGPQV Sbjct 963 PATAWTAPQRVVQHKTPPTLTLTLPRPTQVAGVRLVPSRAALPAHPTMVAVNLGDGPQVT 1022 Query 1028 QLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIA 1087 ++ G+ T+ L PRVTDTV++SLLDW+DVIDRNALGFDQLKPPGLAEV L A G PIA Sbjct 1023 AVKPGQAQTIPLKPRVTDTVTISLLDWEDVIDRNALGFDQLKPPGLAEVAALGADGNPIA 1082 Query 1088 PADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPA 1147 PADA RNRAR ++V C+ GPV+AVAGRFVHT+I TTVGALLD +PVAA+PCER+PIALPA Sbjct 1083 PADAGRNRAREVSVGCERGPVIAVAGRFVHTAIHTTVGALLDDQPVAAVPCERDPIALPA 1142 Query 1148 GQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVV 1207 G+QELLISPGA FVVDGA+LSTP A ++ V A WGP RE+ S SR+LV+ Sbjct 1143 GEQELLISPGAQFVVDGAELSTPAAAEAAQPVRVASWRGWGPDRREIAAGPSNISRILVI 1202 Query 1208 PESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLAL 1267 PESIN GWVART +GARLTPIAVNGWQQ W+VPAG PG ITL+FA NSLYRA LA+GLAL Sbjct 1203 PESINPGWVARTGSGARLTPIAVNGWQQGWLVPAGAPGVITLSFASNSLYRAGLAVGLAL 1262 Query 1268 LPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYA 1327 LP+LALLA WRT +R D P PWRPG WAA LAAGAVIA AGV V+G ALG+RYA Sbjct 1263 LPVLALLACWRTRKRGTQDPPARPWRPGVWAAVPALAAGAVIAGAAGVAVLGAALGLRYA 1322 Query 1328 LRRRERLRDRVTVGLA--AGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAA 1385 L R R +G+A AGGLILAGAALSR PWRSVDGYAG+ VQLLALIS++ + A Sbjct 1323 LGARRWAR----LGMAGSAGGLILAGAALSRQPWRSVDGYAGHAGYVQLLALISLAALTA 1378 Query 1386 SVVATSESRGQDRMQ 1400 SVVA RG R + Sbjct 1379 SVVAVPRRRGGARHE 1393 >gi|336460132|gb|EGO39038.1| F5/8 type C domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=1393 Score = 1996 bits (5171), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1094/1395 (79%), Positives = 1202/1395 (87%), Gaps = 9/1395 (0%) Query 11 VVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP 70 +VGA+ALALTFAQSPG++SPDTKLDLTANPLRFLARATNLWNS+LPFGQAQNQAYGYLFP Sbjct 3 LVGAIALALTFAQSPGRISPDTKLDLTANPLRFLARATNLWNSELPFGQAQNQAYGYLFP 62 Query 71 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP 130 HGTFF+IGH LGVPGW+TQRLWWA+LLTVGFWGLLRVAEALG+G P SRV+ A AFALSP Sbjct 63 HGTFFLIGHALGVPGWITQRLWWALLLTVGFWGLLRVAEALGIGSPGSRVIAAAAFALSP 122 Query 131 RVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIAT 190 RVLTTLGSISSETLPMMLAPWVLLPTILALR T RSVRALAAQAG+AVALMGAVNAIAT Sbjct 123 RVLTTLGSISSETLPMMLAPWVLLPTILALRATGPRSVRALAAQAGVAVALMGAVNAIAT 182 Query 191 LAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG 250 +AGCLPAVIWWACHRPNRLWWRYT WWL+A+ LATLWWV+ L L +SPPFLDFIESSG Sbjct 183 VAGCLPAVIWWACHRPNRLWWRYTGWWLVALVLATLWWVVGLVMLRAISPPFLDFIESSG 242 Query 251 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA 310 VTTQWSSLVE+LRGTDSWTP+VAP ATAGAPLVTGSAA+LGTCLVAAAGLAGL P MPA Sbjct 243 VTTQWSSLVEMLRGTDSWTPYVAPTATAGAPLVTGSAAVLGTCLVAAAGLAGLAGPTMPA 302 Query 311 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL 370 RGRLVTMLLVGVVL+A G+ GGL SP AH VQAFLDA G PLRNVHK+G VIR+P+VLG+ Sbjct 303 RGRLVTMLLVGVVLMAAGYSGGLGSPAAHAVQAFLDAGGAPLRNVHKLGSVIRIPIVLGV 362 Query 371 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG 430 AQLL R+PLPGSAP+ WL AFAHPERDKRVA AVV LTALMVSTSLAWTGR+ PPGTF Sbjct 363 AQLLGRIPLPGSAPKSLWLGAFAHPERDKRVATAVVVLTALMVSTSLAWTGRLTPPGTFT 422 Query 431 ALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDS 490 A+P YWQ+ ADWL H+ + TPGRVLV PGAPFATQVWGTSHDEPLQVLG PWGVRDS Sbjct 423 AIPPYWQQTADWLTQHNTGSSTPGRVLVAPGAPFATQVWGTSHDEPLQVLGASPWGVRDS 482 Query 491 IPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLH 550 IPLTPPQTIRALDSVQRLFAAGRPS GLADTLARQGISYV+VRNDL P+TSRSARPIL+H Sbjct 483 IPLTPPQTIRALDSVQRLFAAGRPSLGLADTLARQGISYVVVRNDLAPDTSRSARPILVH 542 Query 551 RSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATD 610 R++ GSPGL K+A+FGAPVGP +AGFV DSGLRPRYPA+E+YRV A + G PYF TD Sbjct 543 RAVDGSPGLHKVAQFGAPVGPGTVAGFVADSGLRPRYPAVEVYRVDAGGDAGTPYFVDTD 602 Query 611 QLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQ---VAVTDTPVARET 667 ++AR+DGGPEVLLRLDERRRL GQPPLGP L+TADARAAGLP+P V VTDTPVARET Sbjct 603 RMARIDGGPEVLLRLDERRRLLGQPPLGPALLTADARAAGLPLPAGAGVTVTDTPVARET 662 Query 668 DYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDV 727 DYGR+D HSSAIRAPGDARHTYNRVPDYPVPGA+PV+G WTGGRITVSSS++D+TAMPDV Sbjct 663 DYGRMDQHSSAIRAPGDARHTYNRVPDYPVPGADPVLGAWTGGRITVSSSASDSTAMPDV 722 Query 728 APASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRI 787 APA++PAAA+DGDPATAWVSN+LQ+AVGQW+Q+DFD PVTNA +TLTPSATAVGAQVRRI Sbjct 723 APATSPAAAIDGDPATAWVSNSLQSAVGQWMQIDFDHPVTNAALTLTPSATAVGAQVRRI 782 Query 788 LIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDA 847 LIET GSTTLRFD+ GKPL AALPYGETPW+R TAA TDDGS GVQFGITDL +TQYDA Sbjct 783 LIETATGSTTLRFDQPGKPLAAALPYGETPWLRITAAGTDDGSPGVQFGITDLTVTQYDA 842 Query 848 SGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPA 907 SGFAHPV LRHTV VPGPPP S I W+LG EL GRPGCA PD VRCA SM LAPEEP Sbjct 843 SGFAHPVDLRHTVRVPGPPPESPITRWELGPELPGRPGCARAPDSVRCAPSMELAPEEPV 902 Query 908 NLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGD 967 SRTLTVP P SVTP VWVRPRQGPKLADLI P+TT A GDSD VD+LGSAYAA DGD Sbjct 903 TFSRTLTVPAPTSVTPTVWVRPRQGPKLADLITEPNTTVAHGDSDTVDVLGSAYAATDGD 962 Query 968 PATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVR 1027 PATAWTAPQRVVQHKTPPTLTLTLPRPT V G+RL SR+ LPAHPT+VA+NLGDGPQV Sbjct 963 PATAWTAPQRVVQHKTPPTLTLTLPRPTQVAGVRLVPSRAALPAHPTMVAVNLGDGPQVT 1022 Query 1028 QLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIA 1087 ++ G+ T+ L PRVTDTV++SLLDW+DVIDRNALGFDQLKPPGLAEV L A G PI Sbjct 1023 AVKPGQAQTIPLKPRVTDTVTISLLDWEDVIDRNALGFDQLKPPGLAEVAALGADGNPIG 1082 Query 1088 PADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPA 1147 PADA RNRAR ++V C+ GPV+AVAGRFVHT+I TTVGALLD +PVAA+PCER+PIALPA Sbjct 1083 PADAGRNRAREVSVGCERGPVIAVAGRFVHTAIHTTVGALLDDQPVAAVPCERDPIALPA 1142 Query 1148 GQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVV 1207 GQQELLISPGA FVVDGA+LSTP A ++ V A WGP RE+ S TSR+LV+ Sbjct 1143 GQQELLISPGAQFVVDGAELSTPAAAEAAQPVRVASWRGWGPDRREIAAGPSNTSRILVI 1202 Query 1208 PESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLAL 1267 PESIN GWVART +GARLTPIAVNGWQQ W+VPAG+PG ITL+FA NSLYRA LA+GLAL Sbjct 1203 PESINPGWVARTGSGARLTPIAVNGWQQGWLVPAGDPGVITLSFASNSLYRAGLAVGLAL 1262 Query 1268 LPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYA 1327 LP+LALLA WRT +R D P PWRPG WAA LAAGAVIA AGV V+G ALG RYA Sbjct 1263 LPVLALLACWRTRKRGTHDPPARPWRPGVWAAVPALAAGAVIAGAAGVAVLGAALGQRYA 1322 Query 1328 LRRRERLRDRVTVGLA--AGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAA 1385 L R R +G+A AGGLILAGAALSR PWRSVDGYAG+ VQLLALIS++ + A Sbjct 1323 LGARRWAR----LGMAGSAGGLILAGAALSRQPWRSVDGYAGHAGYVQLLALISLAALTA 1378 Query 1386 SVVATSESRGQDRMQ 1400 SVVA RG R + Sbjct 1379 SVVAVPRRRGGARHE 1393 >gi|118616877|ref|YP_905209.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118568987|gb|ABL03738.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=1392 Score = 1988 bits (5149), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1110/1392 (80%), Positives = 1208/1392 (87%), Gaps = 6/1392 (0%) Query 12 VGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPH 71 + AV+LALTFAQSPG+VSPDTKLDLTANPLRFLARAT+LWNS+LPFGQ+QNQAYGY+FPH Sbjct 1 MAAVSLALTFAQSPGRVSPDTKLDLTANPLRFLARATSLWNSELPFGQSQNQAYGYMFPH 60 Query 72 GTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPR 131 GTFF++GHLL +P W+TQRLWWA+LLT+GFWGLLRVAE LG+G P+SR++ A AFALSPR Sbjct 61 GTFFLVGHLLQLPAWITQRLWWALLLTIGFWGLLRVAEGLGIGSPTSRIIAAAAFALSPR 120 Query 132 VLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIATL 191 VLTTLGSISSETLPMMLAPWVLLPTILALR TS R +R LAAQAGLAVALMGAVNAIATL Sbjct 121 VLTTLGSISSETLPMMLAPWVLLPTILALRATSERPLRTLAAQAGLAVALMGAVNAIATL 180 Query 192 AGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSGV 251 AGCLPA+IW ACHRPNR WWRYTAW++LA+ LATLWW++ALTQL GVSPPFLDFIESSGV Sbjct 181 AGCLPAMIWLACHRPNRRWWRYTAWFMLALLLATLWWLVALTQLRGVSPPFLDFIESSGV 240 Query 252 TTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPAR 311 TTQWSSLVE+LRGTDSWTPFVAPNATAGAPLVTGS AILGTCLVAAAGLAGL S MPAR Sbjct 241 TTQWSSLVEMLRGTDSWTPFVAPNATAGAPLVTGSVAILGTCLVAAAGLAGLASREMPAR 300 Query 312 GRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGLA 371 GRLVTMLLVGVVLLAVG+ GGL SP+AH VQAFLD TPLRNVHK+GPVIRLPLVLGLA Sbjct 301 GRLVTMLLVGVVLLAVGYSGGLGSPLAHQVQAFLDVEDTPLRNVHKLGPVIRLPLVLGLA 360 Query 372 QLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFGA 431 +LL R+PLPGSAP+P WL AFAHPERDKRVA +VALTAL+VSTSLAWTGR+ PPGTF A Sbjct 361 ELLGRIPLPGSAPKPVWLGAFAHPERDKRVAAGIVALTALLVSTSLAWTGRLTPPGTFTA 420 Query 432 LPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDSI 491 +P YW +AADWL H+ P PGRVLVVPGAPFATQVWGTSHDE LQVLG PWGVRDSI Sbjct 421 IPAYWHQAADWLSEHNTGAPAPGRVLVVPGAPFATQVWGTSHDEVLQVLGASPWGVRDSI 480 Query 492 PLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLHR 551 PLTPPQTIRALDSVQRL A+GRPS GLAD+LARQGISY+++RNDLDPE+SRSARPIL HR Sbjct 481 PLTPPQTIRALDSVQRLIASGRPSVGLADSLARQGISYLVLRNDLDPESSRSARPILAHR 540 Query 552 SIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYR----VSAPANPGAPYFA 607 +I GSP L K+AEFG PVGP LAGFVNDSGLRPRY AIEI+R V NPGAPYFA Sbjct 541 AITGSPRLQKVAEFGEPVGPGSLAGFVNDSGLRPRYSAIEIFRVIDQVGGAGNPGAPYFA 600 Query 608 ATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARET 667 T L RVDGGPEVLLRLDERRRL GQ LGPVL+T DARAA LPVP V VTDTPVARET Sbjct 601 DTASLPRVDGGPEVLLRLDERRRLLGQTALGPVLLTQDARAAQLPVPVVTVTDTPVARET 660 Query 668 DYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDV 727 DYGRVD HSSA+RAPGDARHTYNR+PDYPVPGAE V GGWTGGRITVSSSS+D+TAMPDV Sbjct 661 DYGRVDQHSSAVRAPGDARHTYNRIPDYPVPGAEVVYGGWTGGRITVSSSSSDSTAMPDV 720 Query 728 APASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRI 787 AP ++ AAAVDGDPATAWVSNALQAAVGQWLQVDFD PVTNAV+TLTPS AVGAQVRRI Sbjct 721 APGASAAAAVDGDPATAWVSNALQAAVGQWLQVDFDHPVTNAVITLTPSPIAVGAQVRRI 780 Query 788 LIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDA 847 L+ETVNGSTTLRFD+AGKPLTAALPYGETPWVR TAA TDDGS GVQFGITDL ITQYDA Sbjct 781 LVETVNGSTTLRFDDAGKPLTAALPYGETPWVRITAAGTDDGSPGVQFGITDLTITQYDA 840 Query 848 SGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPA 907 SGFAH VQLRHTVLVPGPPPG+ IA WDLGSELLGRPGCAP PD +RCAASMALAPEEP Sbjct 841 SGFAHSVQLRHTVLVPGPPPGAEIARWDLGSELLGRPGCAPAPDTMRCAASMALAPEEPV 900 Query 908 NLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGD 967 NLSRTLTVP P++VTP VWVRPRQGPKLADLIA P TTRA GDSD +++LGSAYAA DGD Sbjct 901 NLSRTLTVPHPMTVTPTVWVRPRQGPKLADLIAQPDTTRARGDSDGLEVLGSAYAATDGD 960 Query 968 PATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVR 1027 AT+WTAPQRVVQ K PPTLTLTLPRPT VTGLR+A SRS LPAHPT+VAINLGDGPQ+R Sbjct 961 RATSWTAPQRVVQRKAPPTLTLTLPRPTEVTGLRVAPSRSALPAHPTMVAINLGDGPQIR 1020 Query 1028 QLQ-VGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPI 1086 L G T+ LHPRVT TV+VSLLDW+DVIDRNALGFDQLKPPGLAE+VVL AGG PI Sbjct 1021 SLSPDGGPQTVSLHPRVTGTVTVSLLDWEDVIDRNALGFDQLKPPGLAELVVLGAGGRPI 1080 Query 1087 APADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALP 1146 APADAA NRAR + + CDHGPV+AVAGRFVH S+RTTVGALLD EP+ A PCE EPIALP Sbjct 1081 APADAAHNRAREVRIGCDHGPVIAVAGRFVHMSVRTTVGALLDDEPIQAQPCEPEPIALP 1140 Query 1147 AGQQELLISPGAAFVVDGAQLSTPGAG-LSSATVTSAETGAWGPTHREVRVPESATSRVL 1205 GQQELLISPG FVVDGAQL+ P AG L A ETGAW T REVR P S T RVL Sbjct 1141 PGQQELLISPGTQFVVDGAQLTPPAAGELPGAAAVPWETGAWSATRREVRAPASQTPRVL 1200 Query 1206 VVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGL 1265 V+PESIN GWVART GA+LTP+AVNGWQQ WVVPAG+PGTITL+FA NSLYRA LAIGL Sbjct 1201 VIPESINPGWVARTGAGAQLTPVAVNGWQQGWVVPAGDPGTITLSFAANSLYRAGLAIGL 1260 Query 1266 ALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVR 1325 +LLP+L LL WR RR D P PW G AA LAAGA+IA G +++G ALGV Sbjct 1261 SLLPVLVLLVLWRARRRGPDDPPARPWTTGWAAAVAALAAGALIAGPLGTVLVGAALGVC 1320 Query 1326 YALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAA 1385 YALRRRERLRDR+T+ +AGGLILAGAALSRHPWRSVDGYAG+ A VQLLALIS++ + A Sbjct 1321 YALRRRERLRDRLTIATSAGGLILAGAALSRHPWRSVDGYAGHSAIVQLLALISIAALVA 1380 Query 1386 SVVATSESRGQD 1397 + VA +RG+ Sbjct 1381 ATVAPGLTRGEK 1392 >gi|296167517|ref|ZP_06849869.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897139|gb|EFG76748.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=1280 Score = 1979 bits (5128), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1033/1261 (82%), Positives = 1123/1261 (90%), Gaps = 6/1261 (0%) Query 2 APLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQ 61 A +SR+WL +VGA+AL LTFAQSPG++SPDTKLDLTANPLRFLARATNLWNS+LPFGQAQ Sbjct 4 ARVSRRWLWLVGAIALLLTFAQSPGRISPDTKLDLTANPLRFLARATNLWNSELPFGQAQ 63 Query 62 NQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVV 121 NQAYGYLFPHGTFF IGHLL +PGWVTQRLWWA+LLTVGFWGLLRVAEALG+G P++RV+ Sbjct 64 NQAYGYLFPHGTFFAIGHLLALPGWVTQRLWWALLLTVGFWGLLRVAEALGIGSPAARVI 123 Query 122 GAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRG---TSGRSVRALAAQAGLA 178 GA AFALSPRVLTTLGSISSETLPMMLAPWVLLPTILAL G ++ RSVRALAAQAGLA Sbjct 124 GAAAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALNGARASTNRSVRALAAQAGLA 183 Query 179 VALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGV 238 VALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYT WWLLA+ LATLWW +AL L + Sbjct 184 VALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTGWWLLALFLATLWWAVALVMLRAI 243 Query 239 SPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAA 298 SPPFLDFIESSGVTTQWSSL E+LRGT+SWTP+VAP ATAGAPLVTGSAA++ TCLVAAA Sbjct 244 SPPFLDFIESSGVTTQWSSLTEILRGTESWTPYVAPTATAGAPLVTGSAAVVATCLVAAA 303 Query 299 GLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKV 358 GLAGL SPAMPARGRLVTMLL GVVL+A G+ GGL SPVAH VQAFLDA G PLRNVHK+ Sbjct 304 GLAGLASPAMPARGRLVTMLLTGVVLMAAGYSGGLGSPVAHAVQAFLDAGGAPLRNVHKL 363 Query 359 GPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLA 418 G VIR+P+VLGLAQ+L R+PLPGS P WLRAFA PERD+RVAVA+V LTALMVSTSLA Sbjct 364 GSVIRIPIVLGLAQVLGRIPLPGSVPGAVWLRAFARPERDRRVAVAIVILTALMVSTSLA 423 Query 419 WTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQ 478 WTGR+ PPGTF A+P+YWQ+ ADWL H+ TP PGRVLVVPGAPFATQVWGTSHDEPLQ Sbjct 424 WTGRLTPPGTFSAIPRYWQDTADWLDQHNRGTPVPGRVLVVPGAPFATQVWGTSHDEPLQ 483 Query 479 VLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDP 538 VLG PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISY++VRNDLDP Sbjct 484 VLGGSPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYLVVRNDLDP 543 Query 539 ETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAP 598 ETSRSARPIL+HR++ GSPGL K+A+FG PVGP LAGFV DSGLRPRYPAIE+YRV+ Sbjct 544 ETSRSARPILVHRTVDGSPGLRKVAQFGDPVGPGTLAGFVADSGLRPRYPAIEVYRVAG- 602 Query 599 ANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAV 658 GAPYFA D+L RVDGGPEVL RLDERRRL+GQPPLGPVLMTADAR AGLPVP V V Sbjct 603 -GSGAPYFADVDRLPRVDGGPEVLQRLDERRRLRGQPPLGPVLMTADARGAGLPVPAVTV 661 Query 659 TDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSS 718 TDTPVARETDYGRVD HSSA+RAPGDARHTYNRVPDYPVPGA+PVVG WTGGRITVSSSS Sbjct 662 TDTPVARETDYGRVDLHSSAVRAPGDARHTYNRVPDYPVPGADPVVGDWTGGRITVSSSS 721 Query 719 ADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSAT 778 +D+TAMPDVAPA++P AAVDGDPATAWVSN+LQAAVGQWL+VDFD PVTNA +TLTPSAT Sbjct 722 SDSTAMPDVAPATSPVAAVDGDPATAWVSNSLQAAVGQWLRVDFDHPVTNAAITLTPSAT 781 Query 779 AVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGIT 838 AVGAQVRRILIET GSTTLRFDE GKPL +ALPYGETPWVR TA+ TDDGS GVQFGIT Sbjct 782 AVGAQVRRILIETATGSTTLRFDEPGKPLASALPYGETPWVRITASGTDDGSPGVQFGIT 841 Query 839 DLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAAS 898 DL+ITQYDASGFAHPV LRHTV VPGPPPGS +AGWD+GS LLGRPGCA PDGVRCA S Sbjct 842 DLSITQYDASGFAHPVDLRHTVRVPGPPPGSTVAGWDVGSGLLGRPGCATAPDGVRCAPS 901 Query 899 MALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILG 958 MALAPEEP NLSRTLTVP P+SVTP+VWVRPRQGPKLADL+A P+TTRA GDSDLVD+LG Sbjct 902 MALAPEEPVNLSRTLTVPAPMSVTPLVWVRPRQGPKLADLLAEPNTTRAQGDSDLVDVLG 961 Query 959 SAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAI 1018 SAYAA DGDPATAWTAPQRVVQHKTPPTLTLTLPRPT VTGLRL SRS LPAHPT+V + Sbjct 962 SAYAATDGDPATAWTAPQRVVQHKTPPTLTLTLPRPTEVTGLRLVPSRSALPAHPTMVGV 1021 Query 1019 NLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVV 1078 NLG+GPQVR L+ GE TL LHPR+TDTV+VSLLDW+DVIDRNALGFDQLKPPGLAE+ V Sbjct 1022 NLGEGPQVRALRPGEPQTLALHPRLTDTVTVSLLDWEDVIDRNALGFDQLKPPGLAELAV 1081 Query 1079 LSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPC 1138 L A G P+APADA R+R R +TVDCDHGPV+AVAGRFVHTSIRTTVGALLD PVAA C Sbjct 1082 LGADGQPVAPADAGRDRGREVTVDCDHGPVIAVAGRFVHTSIRTTVGALLDDAPVAAQAC 1141 Query 1139 EREPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAET-GAWGPTHREVRVP 1197 +REPI LPAGQQELLISPGA FVVDGA+LS P ++ +A AWGP REV+ P Sbjct 1142 DREPITLPAGQQELLISPGAQFVVDGAELSAPDTPAAAPGAVAAPVWRAWGPDRREVQAP 1201 Query 1198 ESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLY 1257 S TSRVLV+PESIN GWVART +G RLTP+AVNGWQQ WVVP G+PGTITLTF PN+ Y Sbjct 1202 PSDTSRVLVIPESINPGWVARTGSGTRLTPVAVNGWQQGWVVPPGDPGTITLTFPPNAPY 1261 Query 1258 R 1258 R Sbjct 1262 R 1262 >gi|183980524|ref|YP_001848815.1| transmembrane protein [Mycobacterium marinum M] gi|183173850|gb|ACC38960.1| conserved transmembrane protein [Mycobacterium marinum M] Length=1392 Score = 1972 bits (5108), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1115/1392 (81%), Positives = 1214/1392 (88%), Gaps = 6/1392 (0%) Query 12 VGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPH 71 + AV+LALTFAQSPG+VSPDTKLDLTANPLRFLARAT+LWNS+LPFGQ+QNQAYGY+FPH Sbjct 1 MAAVSLALTFAQSPGRVSPDTKLDLTANPLRFLARATSLWNSELPFGQSQNQAYGYMFPH 60 Query 72 GTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPR 131 GTFF++GHLL +PGW+TQRLWWA+LLT+GFWGLLRVAEALG+G P+SR++ A AFALSPR Sbjct 61 GTFFLVGHLLQLPGWITQRLWWALLLTIGFWGLLRVAEALGIGSPTSRIIAAAAFALSPR 120 Query 132 VLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIATL 191 VLTTLGSISSETLPMMLAPWVLLPTILALR TS R +R LAAQAGLAVALMGAVNAIATL Sbjct 121 VLTTLGSISSETLPMMLAPWVLLPTILALRATSERPLRTLAAQAGLAVALMGAVNAIATL 180 Query 192 AGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSGV 251 AGCLPA+IW ACHRPNR WWR+TAW++LA+ LATLWW++ALTQL GVSPPFLDFIESSGV Sbjct 181 AGCLPAMIWLACHRPNRRWWRHTAWFMLALLLATLWWLVALTQLRGVSPPFLDFIESSGV 240 Query 252 TTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPAR 311 TTQWSSLVE+LRGTDSWTPFVAPNATAGAPLVTGS AILGTCLVAAAGLAGL S MPAR Sbjct 241 TTQWSSLVEMLRGTDSWTPFVAPNATAGAPLVTGSVAILGTCLVAAAGLAGLASREMPAR 300 Query 312 GRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGLA 371 GRLVTMLLVGVVLLAVG+ GGL SP+AH VQAFLDA GTPLRNVHK+GPVIRLPLVLGLA Sbjct 301 GRLVTMLLVGVVLLAVGYSGGLGSPLAHQVQAFLDAEGTPLRNVHKLGPVIRLPLVLGLA 360 Query 372 QLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFGA 431 +LL R+PLPGSAP+P WL AFAHPERDKRVA +VALTAL+VSTSLAWTGR+ PPGT+ A Sbjct 361 ELLGRIPLPGSAPKPVWLGAFAHPERDKRVAAGIVALTALLVSTSLAWTGRLTPPGTYTA 420 Query 432 LPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDSI 491 +P YW +AADWL H+ P PGRVLVVPGAPFATQVWGTSHDE LQVLG PWGVRDSI Sbjct 421 IPAYWHQAADWLSEHNTGAPAPGRVLVVPGAPFATQVWGTSHDEVLQVLGASPWGVRDSI 480 Query 492 PLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLHR 551 PLTPPQTIRALDSVQRL A+GRPS GLAD+LARQGISY+++RNDLDPE+SRS RPIL HR Sbjct 481 PLTPPQTIRALDSVQRLIASGRPSVGLADSLARQGISYLVLRNDLDPESSRSTRPILAHR 540 Query 552 SIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYR----VSAPANPGAPYFA 607 +I GSP L K+AEFG PVGP LAGFVNDSGLRPRY AIEI+R V NPGAPYFA Sbjct 541 AITGSPRLQKVAEFGEPVGPGSLAGFVNDSGLRPRYSAIEIFRVIDQVGGAGNPGAPYFA 600 Query 608 ATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARET 667 T L RVDGGPEVLLRLDERRRL GQ LGPVL+T DARAA LPVP V VTDTPVARET Sbjct 601 DTASLPRVDGGPEVLLRLDERRRLLGQTALGPVLLTQDARAAQLPVPVVTVTDTPVARET 660 Query 668 DYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDV 727 DYGRVD HSSA+RAPGDARHTYNRVPDYPVPGAE V GGWTGGRITVSSSS+D+TAMPDV Sbjct 661 DYGRVDQHSSAVRAPGDARHTYNRVPDYPVPGAEVVYGGWTGGRITVSSSSSDSTAMPDV 720 Query 728 APASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRI 787 AP ++ AAAVDGDPATAWVSNALQAAVGQWLQVDFD PVTNAV+TLTPS TAVGAQVRRI Sbjct 721 APGASAAAAVDGDPATAWVSNALQAAVGQWLQVDFDHPVTNAVITLTPSPTAVGAQVRRI 780 Query 788 LIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDA 847 L+ETVNGSTTLRFD+AGKPLTAALPYGETPWVR TAA TDDGS GVQFGITDL ITQYDA Sbjct 781 LVETVNGSTTLRFDDAGKPLTAALPYGETPWVRITAAGTDDGSPGVQFGITDLTITQYDA 840 Query 848 SGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPA 907 SGFAH VQLRHTVLVPGPPPG+ IA WDLGSELLGRPGCAP PD +RCAASMALAPEEP Sbjct 841 SGFAHSVQLRHTVLVPGPPPGAEIARWDLGSELLGRPGCAPAPDTMRCAASMALAPEEPV 900 Query 908 NLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGD 967 NLSRTLTVP P++VTP VWVRPRQGPKLADLIA P TTRA GDSD +++LGSAYAA DGD Sbjct 901 NLSRTLTVPHPMTVTPTVWVRPRQGPKLADLIAQPDTTRARGDSDGLEVLGSAYAATDGD 960 Query 968 PATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVR 1027 AT+WTAPQRVVQ KTPPTLTLTLPRPT VTGLR+A SRS LPAHPT+VAINLGDGPQ+R Sbjct 961 RATSWTAPQRVVQRKTPPTLTLTLPRPTEVTGLRVAPSRSALPAHPTMVAINLGDGPQIR 1020 Query 1028 QLQ-VGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPI 1086 L G T+ LHPRVT TV+VSLLDW+DVIDRNALGFDQLKPPGLAE+VVL AGG PI Sbjct 1021 SLSPDGGPQTVSLHPRVTGTVTVSLLDWEDVIDRNALGFDQLKPPGLAELVVLGAGGRPI 1080 Query 1087 APADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALP 1146 APADAA NRAR + + CDHGPV+AVAGRFVH S+RTTVGALLD EP+ A PCE EPIALP Sbjct 1081 APADAAHNRAREVRIGCDHGPVIAVAGRFVHMSVRTTVGALLDDEPIQAQPCEPEPIALP 1140 Query 1147 AGQQELLISPGAAFVVDGAQLSTPGAG-LSSATVTSAETGAWGPTHREVRVPESATSRVL 1205 GQQELLISPG FVVDGAQL+ P AG L A AETGAW T REVR P S T RVL Sbjct 1141 PGQQELLISPGTQFVVDGAQLTPPAAGELPGAAAVPAETGAWSATRREVRAPASQTPRVL 1200 Query 1206 VVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGL 1265 V+PESIN GWVART GA+LTP+AVNGWQQ WVVPAG+PGTITL+FA NSLYRA LAIGL Sbjct 1201 VIPESINPGWVARTGAGAQLTPVAVNGWQQGWVVPAGDPGTITLSFAANSLYRAGLAIGL 1260 Query 1266 ALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVR 1325 +LLP+L LL WR RR D P PW G AA LAAGA+IA G +++G ALGV Sbjct 1261 SLLPVLVLLVLWRARRRGPDDPPARPWTTGWAAAVAALAAGALIAGPLGAVLVGAALGVC 1320 Query 1326 YALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAA 1385 YALRRRERLRDR+T+ +AGGLILAGAALSRHPWRSVDGYAG+ A VQLLALIS++ + A Sbjct 1321 YALRRRERLRDRLTIATSAGGLILAGAALSRHPWRSVDGYAGHSAIVQLLALISIAALVA 1380 Query 1386 SVVATSESRGQD 1397 + VA +RG+ Sbjct 1381 ATVAPGLTRGEK 1392 >gi|333988858|ref|YP_004521472.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333484826|gb|AEF34218.1| transmembrane protein [Mycobacterium sp. JDM601] Length=1425 Score = 1865 bits (4832), Expect = 0.0, Method: Compositional matrix adjust. Identities = 990/1394 (72%), Positives = 1126/1394 (81%), Gaps = 21/1394 (1%) Query 4 LSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQ 63 LSR+WL +VGAVALA +F Q+PG++SPDTKLDLTA+PLRFL RA NLW+S+LPFGQ QNQ Sbjct 4 LSRRWLWLVGAVALACSFIQAPGRISPDTKLDLTADPLRFLTRAVNLWSSELPFGQVQNQ 63 Query 64 AYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGA 123 AYGYLFPHG FF++G +G+PGW+ QRLWWA+LLTVGFWGLLRVAE L +G P++R++GA Sbjct 64 AYGYLFPHGAFFLLGDFVGLPGWIIQRLWWALLLTVGFWGLLRVAETLRLGTPTARLIGA 123 Query 124 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILAL----RGTSGRSVRALAAQAGLAV 179 AFALSPRVLTT+GSISSETLPMMLAPWVLLP I AL T GR VRALA QAG+AV Sbjct 124 AAFALSPRVLTTMGSISSETLPMMLAPWVLLPVIRALGAPGSETPGRPVRALAGQAGVAV 183 Query 180 ALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVS 239 ALMGAVNA+ATLAGCLPA+IWW CHRPNR WW +T WWLLA+ALA WW++AL L VS Sbjct 184 ALMGAVNAVATLAGCLPAIIWWLCHRPNRRWWSFTGWWLLALALAVTWWLVALLLLGRVS 243 Query 240 PPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAG 299 PPFLDFIES+GVTT+W+SL E+LRGT SWTPFVAPNATAGAPLVT ILGTCLVAAAG Sbjct 244 PPFLDFIESAGVTTRWTSLTEILRGTHSWTPFVAPNATAGAPLVTRPVLILGTCLVAAAG 303 Query 300 LAGLTS---PAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVH 356 LAGLT +P GRL+TMLL+GV LLAVG+ GGL SP+AH VQ FLDA G PLRNVH Sbjct 304 LAGLTGMLRRRLPGAGRLITMLLIGVTLLAVGYAGGLGSPLAHAVQTFLDADGAPLRNVH 363 Query 357 KVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTS 416 K+ VIRLPLVLG+ LL R+PLPGSAP W RA+ HPE K AV +V LTALMVSTS Sbjct 364 KLESVIRLPLVLGVTYLLGRIPLPGSAPAAVWRRAYVHPEHHKAAAVGLVVLTALMVSTS 423 Query 417 LAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEP 476 LAWTGR+ PPGTF LPQYW++AA WL H+ PTPGRVLVVPGAPFATQ WGTSHDEP Sbjct 424 LAWTGRLTPPGTFQDLPQYWRDAAAWLGEHNTGGPTPGRVLVVPGAPFATQTWGTSHDEP 483 Query 477 LQVLGD---GPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVR 533 LQVL + GPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISY+++R Sbjct 484 LQVLSETAGGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYLVLR 543 Query 534 NDLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIY 593 NDLDP+TSRSARP+L+HR++ GSPGL ++A+FG PVG + GFV+DSGLRP YPAIEIY Sbjct 544 NDLDPDTSRSARPLLVHRAVDGSPGLHRVAQFGNPVGSGTVPGFVSDSGLRPAYPAIEIY 603 Query 594 RVSAPA---NPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAG 650 RV PA NPGAPY A D + RV GGPEVLLRLDE RR++G+P LGPVLMTADAR AG Sbjct 604 RVGDPAAGANPGAPYLADLDAMRRVAGGPEVLLRLDEHRRMRGEPVLGPVLMTADARRAG 663 Query 651 LPVPQ---VAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGW 707 L P+ + VTDTP+ARETDYGRVD HSS +RA GDARHT++RVPDYP PGA V GGW Sbjct 664 LGAPRNGGITVTDTPLARETDYGRVDDHSSTLRAAGDARHTHSRVPDYPTPGAATVFGGW 723 Query 708 TGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVT 767 GGRIT SSSS+DATA+PDVAP+++PAAA+DGD TAWVSNALQ+AVGQWLQ+DFD P+T Sbjct 724 IGGRITASSSSSDATALPDVAPSTSPAAAIDGDSGTAWVSNALQSAVGQWLQIDFDHPLT 783 Query 768 NAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATD 827 N +T+TPSATAVGAQVRRI I TVNG+TTLRFD AG+PLTAALPYGETPWVR TA+ T+ Sbjct 784 NGTITVTPSATAVGAQVRRIQISTVNGTTTLRFDHAGEPLTAALPYGETPWVRITASGTE 843 Query 828 DGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCA 887 DGS GVQFGITDL++TQYDASG+AHPV LRHT LVP PP G+ ++ WDLG+ L GR GCA Sbjct 844 DGSPGVQFGITDLSVTQYDASGYAHPVDLRHTALVPAPPAGARVSQWDLGAGLPGRAGCA 903 Query 888 PGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRA 947 VRCAASM L PEEPA SRTL VP+P+SVTP VWVRPRQGP L DLIA P RA Sbjct 904 AASGAVRCAASMMLEPEEPATFSRTLNVPQPISVTPTVWVRPRQGPHLVDLIAEPGAARA 963 Query 948 SGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRS 1007 GD+D++D+LGSAYAAADGDP TAWTA QRVV H++PPTLT+TLPRP V GLR AASRS Sbjct 964 RGDADVLDVLGSAYAAADGDPGTAWTASQRVVAHRSPPTLTITLPRPVEVAGLRFAASRS 1023 Query 1008 MLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQ 1067 LPA PT+VAI+LG GPQVR+L + + L PRVTDTVS+SLL+W DVIDR A+GFDQ Sbjct 1024 PLPARPTLVAIDLGSGPQVRELADSDEQRVGLQPRVTDTVSISLLEWQDVIDRTAIGFDQ 1083 Query 1068 LKPPGLAEVVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGAL 1127 LKPPGLAEV VL A G PIAPAD ARNRAR +TVDC HGP+VA+AGRFVHTSI TTVGAL Sbjct 1084 LKPPGLAEVSVLGADGRPIAPADPARNRARRVTVDCGHGPIVAIAGRFVHTSITTTVGAL 1143 Query 1128 LDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLSTPGA---GLSSATVTSAET 1184 LD EPV A PC++ PIALP G QELLISPG+AFVVD A LS P A G+ +AT T A Sbjct 1144 LDDEPVRAQPCDQRPIALPPGAQELLISPGSAFVVDSATLSGPLATRDGVGTAT-TPAVV 1202 Query 1185 GAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNP 1244 G W P REV V +++ +RVLVVPESIN GWVART G+RL P+AVNGWQQ WVVPAG Sbjct 1203 GTWSPARREVTVSDASATRVLVVPESINRGWVARTPDGSRLVPVAVNGWQQGWVVPAGTD 1262 Query 1245 GTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPG-AWAAAGVL 1303 GTITL F PN +YR +A GLALLP+LALLA W R + P PW+P VL Sbjct 1263 GTITLRFGPNRMYRLGMAGGLALLPMLALLACWPARRIRSPGPPARPWQPSRGQLGIAVL 1322 Query 1304 AAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVD 1363 G +IA AG +V G AL +ALR R+R D +GL++GGLILAGA L RHPWRSVD Sbjct 1323 TVGTLIAGAAGAVVFGAALIAMFALRHRQRAFDATRLGLSSGGLILAGAVLCRHPWRSVD 1382 Query 1364 GYAGNWASVQLLAL 1377 GYAG+ A VQL AL Sbjct 1383 GYAGHSAGVQLAAL 1396 >gi|315442006|ref|YP_004074885.1| F5/8 type C domain-containing protein [Mycobacterium sp. Spyr1] gi|315260309|gb|ADT97050.1| F5/8 type C domain-containing protein [Mycobacterium sp. Spyr1] Length=1416 Score = 1811 bits (4692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 964/1396 (70%), Positives = 1101/1396 (79%), Gaps = 25/1396 (1%) Query 3 PLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQN 62 PLSR+WL V GA AL LTFAQSPGQ+SPDTKLDLTANPLRFLARA NLWNSDLPFGQAQN Sbjct 5 PLSRRWLWVAGAAALVLTFAQSPGQISPDTKLDLTANPLRFLARAFNLWNSDLPFGQAQN 64 Query 63 QAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVG 122 QAYGYLFPHGTFF+ G LLGVPGWVTQRLWWA+LL +GFWG+LRVAEALG+G +RV+G Sbjct 65 QAYGYLFPHGTFFLAGDLLGVPGWVTQRLWWALLLVIGFWGVLRVAEALGIGTTPARVIG 124 Query 123 AVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSG----------------- 165 AVA+ALSPRVLTTLG+ISSETLPMMLAPWVLLP ILAL+G SG Sbjct 125 AVAYALSPRVLTTLGAISSETLPMMLAPWVLLPVILALQGGSGGVGRAQGGSGGVGRAQN 184 Query 166 -RSVRALAAQAGLAVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALA 224 R +R LAA++ LA+ALMGAVNA+ATL CL A +W CHRPNR+WWR+ AWWL +ALA Sbjct 185 GRRIRTLAARSALAIALMGAVNAVATLTACLCAAVWLLCHRPNRVWWRFVAWWLPCVALA 244 Query 225 TLWWVMALTQLHGVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVT 284 WWV+AL L +SPPFLDFIESSGVTT+W SL E+LRGT +WTP+VAP ATAGAPLVT Sbjct 245 VTWWVIALLHLGRISPPFLDFIESSGVTTRWMSLTEMLRGTGAWTPYVAPTATAGAPLVT 304 Query 285 GSAAILGTCLVAAAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAF 344 GS A+L T LVAA GLAGL MPARGRL+TMLLVGVVLLA + GGL SP+AH VQ F Sbjct 305 GSVAVLATTLVAAGGLAGLAMTRMPARGRLITMLLVGVVLLASTYSGGLGSPIAHAVQIF 364 Query 345 LDAAGTPLRNVHKVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVA 404 LDA GTPLRN+HK+ P++RLPL LGL LL R+PLPGS RP W AFAHPE D+RVAV Sbjct 365 LDADGTPLRNLHKLEPLLRLPLALGLIYLLGRIPLPGSVARPVWRDAFAHPENDRRVAVG 424 Query 405 VVALTALMVSTSLAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPF 464 +V L AL +TSLAWTGR+ PPGTF A+PQYW + ADWL ++ T GRVLV PGAPF Sbjct 425 IVLLAALTAATSLAWTGRLTPPGTFDAIPQYWHDTADWLDDNN----TGGRVLVAPGAPF 480 Query 465 ATQVWGTSHDEPLQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLAR 524 ATQVWG SHDEPLQVLGD WGVRDSIPLTPP+TIRALDSVQRLFAAGRPS GLADTLAR Sbjct 481 ATQVWGNSHDEPLQVLGDSAWGVRDSIPLTPPETIRALDSVQRLFAAGRPSDGLADTLAR 540 Query 525 QGISYVLVRNDLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLR 584 QGISYV+VRNDLDPETSRSARPIL+HR++ GSPGL ++A FG PVGP L GFV DSGLR Sbjct 541 QGISYVVVRNDLDPETSRSARPILVHRAVDGSPGLTRVASFGDPVGPGTLDGFVADSGLR 600 Query 585 PRYPAIEIYRVSAPANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTA 644 PRYPA+EIYRV + + PY A D +ARVDGGPE L+RLDERRRL G+P LGPVL+T Sbjct 601 PRYPAVEIYRVDSLGSL-TPYVAEADSMARVDGGPESLMRLDERRRLTGEPALGPVLLTQ 659 Query 645 DARAAGLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVV 704 DA AGLP P V VTDTP ARETDYGRVD HSSAIR P DAR+T+NRVPDYP GA+ V Sbjct 660 DAARAGLPAPLVTVTDTPTARETDYGRVDDHSSAIRGPDDARNTFNRVPDYPSEGADLVY 719 Query 705 GGWTGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDR 764 G W GGR+TVSS+++D+TA+P+V+P+S PA+A+DGD +T+WVSNALQ A+GQWLQVDFD Sbjct 720 GQWDGGRVTVSSAASDSTALPNVSPSSGPASAIDGDTSTSWVSNALQTAIGQWLQVDFDL 779 Query 765 PVTNAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAA 824 PVTNA +T+TPSATAVGAQVRR+ + TVNG+T++RF+EAGKPLT ALPYGE+PWVR TA Sbjct 780 PVTNATLTITPSATAVGAQVRRMEVSTVNGTTSVRFEEAGKPLTVALPYGESPWVRITAT 839 Query 825 ATDDGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRP 884 TDDGS GVQFG+TD+ +TQYDA+GFAHPV LRHTV VPGPPPGSA+A WDLGSELLGR Sbjct 840 GTDDGSPGVQFGLTDINVTQYDANGFAHPVTLRHTVDVPGPPPGSAVAQWDLGSELLGRA 899 Query 885 GCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPST 944 GCA P G+RCAA+MALA EEPANLSRTL VP P+ VTP VWVR RQGP+LADL+A P T Sbjct 900 GCAESPTGIRCAAAMALASEEPANLSRTLAVPEPIEVTPTVWVRARQGPQLADLVAQPGT 959 Query 945 TRASGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAA 1004 TRA GDSD +D+LGSAYAAADGDP T+WTAPQR Q TPP+L L LP P V G+RL Sbjct 960 TRAVGDSDPIDVLGSAYAAADGDPGTSWTAPQRSAQPHTPPSLVLRLPEPRNVAGIRLTP 1019 Query 1005 SRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALG 1064 S S LPAHP ++A++LGDGPQVR++ TL LHPRVTD+V+V L+DWDDVIDRNALG Sbjct 1020 SSSALPAHPRMIAVDLGDGPQVRRMSADGTQTLDLHPRVTDSVTVWLMDWDDVIDRNALG 1079 Query 1065 FDQLKPPGLAEVVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTV 1124 FDQLKPPGLAE VL G PI DAA NR R +++ C GPV+ VAG FV TS+ TTV Sbjct 1080 FDQLKPPGLAEATVLDDRGQPIGATDAAANRERTVSLPCGRGPVIGVAGEFVQTSVTTTV 1139 Query 1125 GALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLSTPGAG-LSSATVTSAE 1183 G LL G PV A PC +PI LPAGQQELLISPG A +VDG QLST AG + SAT +S Sbjct 1140 GDLLAGRPVPAQPCRDQPIRLPAGQQELLISPGGALIVDGVQLSTARAGEIGSATTSSVT 1199 Query 1184 TGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGN 1243 WGP REV P S +++VLVVPES+N GWVAR ++GA L P+ VNGWQQ WV+P Sbjct 1200 VNRWGPADREVSTPPSESTQVLVVPESVNPGWVARAASGATLDPVTVNGWQQGWVLPPDT 1259 Query 1244 PGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWR-PGAWAAAGV 1302 G +TL F NS YRA L GLALLPLL +LAF A PW+ P A Sbjct 1260 EGPVTLHFTSNSTYRAGLIGGLALLPLLLVLAFVPVRAGAAASTAARPWQPPAVAVGAAA 1319 Query 1303 LAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSV 1362 A VI+ + G++V G ALGVRY LR RERL DR+TVG+AA GLILAGA LS +PWRSV Sbjct 1320 AVAATVISGVGGLLVTGVALGVRYLLRHRERLVDRLTVGVAASGLILAGAVLSGNPWRSV 1379 Query 1363 DGYAGNWASVQLLALI 1378 DGY G+ A VQ LAL+ Sbjct 1380 DGYVGHSAGVQFLALL 1395 >gi|118469359|ref|YP_884772.1| hypothetical protein MSMEG_0359 [Mycobacterium smegmatis str. MC2 155] gi|118170646|gb|ABK71542.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=1414 Score = 1805 bits (4674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 984/1393 (71%), Positives = 1118/1393 (81%), Gaps = 21/1393 (1%) Query 11 VVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP 70 +V A L LTFAQSPGQ+SPDTKLDLTANPLRFLARA NLWNSDLPFGQAQNQAYGYLFP Sbjct 1 MVAAATLVLTFAQSPGQISPDTKLDLTANPLRFLARAFNLWNSDLPFGQAQNQAYGYLFP 60 Query 71 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP 130 HGTFF++G +LGVPGWVTQRLWWA+LLTVGFWG+LRVAEALG+G SR++GA AFALSP Sbjct 61 HGTFFLLGDVLGVPGWVTQRLWWALLLTVGFWGVLRVAEALGIGSTPSRLIGAAAFALSP 120 Query 131 RVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIAT 190 RVLTTLG+ISSETLPMMLAPWVLLP ILALRG SVR +AA++ AVALMGAVNA+AT Sbjct 121 RVLTTLGAISSETLPMMLAPWVLLPVILALRGQ--HSVRLMAARSAGAVALMGAVNAVAT 178 Query 191 LAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG 250 L GCL AVIWWACHRPNRLWWR+TAWWLL ALA WWV+AL L +SPPFLDFIESSG Sbjct 179 LTGCLAAVIWWACHRPNRLWWRFTAWWLLCGALAVTWWVVALLMLGRISPPFLDFIESSG 238 Query 251 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA 310 VTTQW SL E+LRGT SWTPFVAP+ATAGA LVT + A+L T +VAAAGLAGL MPA Sbjct 239 VTTQWMSLTEMLRGTMSWTPFVAPSATAGASLVTSTTAVLATTVVAAAGLAGLALRTMPA 298 Query 311 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL 370 RGRL+TMLL+GVVLL +G+ GGL SPVA VQAFLD +GTPLRN+ K+ PVIRLPL LGL Sbjct 299 RGRLITMLLIGVVLLGLGYSGGLGSPVALQVQAFLDGSGTPLRNLAKLEPVIRLPLALGL 358 Query 371 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG 430 LL R+PLPGSAPR W+ AFAHPERDKRVAVA+V L+AL TSLAWT R+ PPG+F Sbjct 359 VHLLGRIPLPGSAPRAVWVSAFAHPERDKRVAVAIVVLSALAAGTSLAWTARLTPPGSFT 418 Query 431 ALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDS 490 A+PQ+W +AA WL H+ GRVLV PGAPFATQVWG SHDEPLQVLGD PWGVRDS Sbjct 419 AIPQHWHDAAAWLDEHNTDR---GRVLVAPGAPFATQVWGNSHDEPLQVLGDNPWGVRDS 475 Query 491 IPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLH 550 IPLTPP+TIRALDSVQRLFA+GRPS GLADTLARQGISYV+VRNDLDP+TSRSARPIL+H Sbjct 476 IPLTPPETIRALDSVQRLFASGRPSPGLADTLARQGISYVVVRNDLDPDTSRSARPILVH 535 Query 551 RSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGA------- 603 R++ GSPGL K+AEFG PVGP L GFV DSGLRPRYPA+EI+RV PA+ G+ Sbjct 536 RAVEGSPGLTKVAEFGDPVGPGTLEGFVADSGLRPRYPAVEIFRVE-PADAGSSQQRSPM 594 Query 604 -PYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTP 662 PY +D + RV G PE LLRLDERRRL G+PPLGP+L+ ADAR AGLPV V VTDTP Sbjct 595 HPYLVDSDAMTRVAGAPEALLRLDERRRLNGEPPLGPMLLAADARRAGLPVDGVIVTDTP 654 Query 663 VARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADAT 722 ARE DYGRVD H+SAIR P DARHTYNRVPDYP GA+ V G WTGGR++VSSS+AD+T Sbjct 655 TAREIDYGRVDDHASAIRTPDDARHTYNRVPDYPSDGADLVYGKWTGGRLSVSSSAADST 714 Query 723 AMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGA 782 A+P VAPA+ PAAA+D D +TAWVSNALQAAVGQWLQVDFD PVTNA +T+TPSATAVGA Sbjct 715 ALPYVAPATGPAAAIDSDSSTAWVSNALQAAVGQWLQVDFDHPVTNATLTITPSATAVGA 774 Query 783 QVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAI 842 QVRRI I T G+++LRFD AGKPLT LP GETPWVR TA ATDDGS GVQFG+TDLAI Sbjct 775 QVRRIEIATATGTSSLRFDTAGKPLTIPLPVGETPWVRVTAVATDDGSPGVQFGVTDLAI 834 Query 843 TQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALA 902 TQYDASGFAHPV LRHTV VPGPP GS + WDLG+ELLGRPGCA P GVRCAA+MALA Sbjct 835 TQYDASGFAHPVTLRHTVEVPGPPAGSVVQQWDLGTELLGRPGCADSPVGVRCAAAMALA 894 Query 903 PEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYA 962 EEP NLSRTLTVP+ V P VW+R RQGP LADL+A P TTRA GDSD +D+LGSAYA Sbjct 895 SEEPVNLSRTLTVPQDTEVQPTVWIRGRQGPNLADLVAQPDTTRAFGDSDPIDVLGSAYA 954 Query 963 AADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGD 1022 A DGDP T+WTAPQRVVQ +TPPTLTL LPRPT V+G+R+ + PAHPT+VAI+LGD Sbjct 955 ATDGDPRTSWTAPQRVVQFQTPPTLTLKLPRPTEVSGMRIVPGDTEPPAHPTLVAIDLGD 1014 Query 1023 GPQVRQLQV-GELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSA 1081 GPQ+ +L GE T+ L PRVTDTV+VSLL W+D+IDR +LGFDQLKPPGLAE+ VL Sbjct 1015 GPQMHRLPADGEPRTVTLKPRVTDTVTVSLLAWNDIIDRTSLGFDQLKPPGLAELTVLDG 1074 Query 1082 GGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCERE 1141 GAP+ ADAA+NR+RA+ + C GP++AVAG+F+ TS+ TTVGALLDGEP+ A PC E Sbjct 1075 RGAPVGAADAAKNRSRAVALPCGQGPIIAVAGQFIQTSVHTTVGALLDGEPIPARPCRSE 1134 Query 1142 PIALPAGQQELLISPGAAFVVDGAQLSTPGAG-LSSATVTSAETGAWGPTHREVRVPESA 1200 P+ LPAGQQEL++SPGAAF+VDG +L TP A + SA TSAETG W REVRV +A Sbjct 1135 PVKLPAGQQELVVSPGAAFIVDGVELPTPAADEIRSAPTTSAETGTWTADRREVRVSAAA 1194 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 RVLVVPES+N GW A GA L + VNGWQQ WVVPAG GT+TLTFA N YR Sbjct 1195 QQRVLVVPESVNRGWSAHDPAGAELQSVTVNGWQQGWVVPAGTEGTVTLTFASNMPYRVG 1254 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPG-AWAAAGVLAAGAVIASIAGVMVMG 1319 L GLALLPLLALLA R A P PW PG A L AG I+ +AG++V+G Sbjct 1255 LIGGLALLPLLALLALIPVRRPVRAAAPARPWNPGPVLTGAAALVAGTAISGVAGLLVVG 1314 Query 1320 TALGVRYALRRR----ERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLL 1375 A+GVR L RR E++ D VTV +AAGGLILAG+ LS++PWRSVDGY G+ VQ L Sbjct 1315 AAMGVRILLNRRGAAGEKVWDNVTVVVAAGGLILAGSVLSQYPWRSVDGYVGHTPGVQFL 1374 Query 1376 ALISVSVVAASVV 1388 AL+SV+ +AAS V Sbjct 1375 ALLSVAFLAASAV 1387 >gi|108797206|ref|YP_637403.1| hypothetical protein Mmcs_0226 [Mycobacterium sp. MCS] gi|119866291|ref|YP_936243.1| hypothetical protein Mkms_0236 [Mycobacterium sp. KMS] gi|108767625|gb|ABG06347.1| putative conserved transmembrane protein [Mycobacterium sp. MCS] gi|119692380|gb|ABL89453.1| putative conserved transmembrane protein [Mycobacterium sp. KMS] Length=1384 Score = 1787 bits (4629), Expect = 0.0, Method: Compositional matrix adjust. Identities = 964/1361 (71%), Positives = 1099/1361 (81%), Gaps = 6/1361 (0%) Query 16 ALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFF 75 AL LTFAQSPGQ+SPDTKLDLTANPLRFLARA NLWNS+LPFGQAQNQAYGYLFPHGTFF Sbjct 3 ALVLTFAQSPGQISPDTKLDLTANPLRFLARAANLWNSELPFGQAQNQAYGYLFPHGTFF 62 Query 76 VIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTT 135 + G LLG+PGWVTQRLWWA+LLTVGFWG++RVAEALG+G P+SRV+GAVA+ALSPRVLTT Sbjct 63 LAGDLLGLPGWVTQRLWWALLLTVGFWGVVRVAEALGLGSPTSRVIGAVAYALSPRVLTT 122 Query 136 LGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIATLAGCL 195 LG++SSETLPMMLAPWVLLP ILALRG S R LAA++ A+ALMGAVNA+ATL GCL Sbjct 123 LGALSSETLPMMLAPWVLLPVILALRGEG--SARRLAARSAGAIALMGAVNAVATLTGCL 180 Query 196 PAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSGVTTQW 255 AV+WWACHRPNRLWWR+TAWW ALA LWWV+ L L +SPPFLDFIESSGVTTQW Sbjct 181 AAVLWWACHRPNRLWWRFTAWWFGCAALAVLWWVVPLLLLGRISPPFLDFIESSGVTTQW 240 Query 256 SSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPARGRLV 315 SL E+LRGT SWTPFVAP ATAG+ LVTGS A+L T LVAAAG+AGL +MPARGRL+ Sbjct 241 MSLTEMLRGTGSWTPFVAPTATAGSTLVTGSLAVLATTLVAAAGMAGLALRSMPARGRLI 300 Query 316 TMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGLAQLLS 375 TMLLVGV LLA G+ GGL SPVA VQAFLD GTPLRN+ K+ PV+RLPL LG+ LL+ Sbjct 301 TMLLVGVALLAAGYAGGLGSPVAGAVQAFLDGDGTPLRNLQKLDPVLRLPLALGVIHLLA 360 Query 376 RVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFGALPQY 435 R+PLPGSAPRP WL AFAHPE+D+RVAV +V L AL +TSLAWTGR+ PPG F A+P + Sbjct 361 RIPLPGSAPRPVWLHAFAHPEKDRRVAVGIVVLAALTAATSLAWTGRLTPPGAFTAIPGH 420 Query 436 WQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDSIPLTP 495 W E A WL H+ PT GRVLV PGAPFATQVWG+SHDEPLQVLG+ PWGVRDSIPLTP Sbjct 421 WHETAAWLDAHNTGDPTAGRVLVAPGAPFATQVWGSSHDEPLQVLGESPWGVRDSIPLTP 480 Query 496 PQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLHRSIAG 555 P+TIRALDSVQRLFAAGRPSAGLADTLARQGISYV+VRNDLDPE+SRSARP+L+HR+I G Sbjct 481 PETIRALDSVQRLFAAGRPSAGLADTLARQGISYVVVRNDLDPESSRSARPVLVHRAIDG 540 Query 556 SPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATDQLARV 615 SPGL ++A+FG PVGP L GFV+DSGLRPRYPA+EIYRV A NP PY D +ARV Sbjct 541 SPGLTRVAQFGDPVGPGTLEGFVSDSGLRPRYPAVEIYRVDAQHNPSTPYLVDADAMARV 600 Query 616 DGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYGRVDHH 675 DG PE LLRLDERRRL +PPLGP+L+TADA AGLP P V VTDTP ARETDYGRVD H Sbjct 601 DGAPEALLRLDERRRLLDRPPLGPMLLTADAERAGLPAPLVTVTDTPTARETDYGRVDDH 660 Query 676 SSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPASAPAA 735 SSAIR P D R+T+NRVPDYP GA+ V G WTGGR++VSSS+AD+TA+P+VAPA+ P A Sbjct 661 SSAIRTPDDPRNTFNRVPDYPSAGADVVYGRWTGGRLSVSSSAADSTALPNVAPATGPTA 720 Query 736 AVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIETVNGS 795 A+D D +T+WVSNALQAA+GQWLQVDFD+PVTNA +T+TPSATAVGAQVRR+ + TVNG+ Sbjct 721 AIDADTSTSWVSNALQAALGQWLQVDFDKPVTNATITVTPSATAVGAQVRRMEVATVNGT 780 Query 796 TTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGFAHPVQ 855 +TLRF+EAGKPLT ALPYGETPWVR TA TDDGSAGVQFGITDL++TQYDA+GFA P+ Sbjct 781 STLRFEEAGKPLTVALPYGETPWVRITATGTDDGSAGVQFGITDLSVTQYDANGFATPIH 840 Query 856 LRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTV 915 LRHTV VPGPP GSA+ WDLGSELLGR GC PDGV+CAA+MAL+PEEP NLSRTL V Sbjct 841 LRHTVEVPGPPAGSAVGLWDLGSELLGRQGCVDSPDGVKCAAAMALSPEEPVNLSRTLAV 900 Query 916 PRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAP 975 P P SV P VWVR RQGP+LA+LI P TT +GD+D +D+LGS+YAA DGDP TAWTAP Sbjct 901 PAPTSVQPTVWVRARQGPRLAELIRQPDTTVVAGDADALDVLGSSYAAGDGDPRTAWTAP 960 Query 976 QRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQ-VGEL 1034 QRVVQH+TPPTLTL LP PT V LR+ S++ PAHP +VA++LG+GPQ R+L G+ Sbjct 961 QRVVQHRTPPTLTLRLPAPTEVAALRITPSKTEPPAHPRMVAVDLGNGPQARRLSGDGDT 1020 Query 1035 TTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPADAARN 1094 T+ L P TDT++VSLLDW+D+IDR +LGFDQLKPPGLAEV L G PI ADA N Sbjct 1021 ETIRLTPHRTDTIAVSLLDWNDIIDRTSLGFDQLKPPGLAEVTALDRRGNPIGAADAGEN 1080 Query 1095 RARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLI 1154 R R + V C GP++ VAG+FV T + TVGAL+DGEPV A PC EPIALPAGQQELL+ Sbjct 1081 RGRTVDVPCGEGPIIGVAGQFVPTRVTATVGALVDGEPVLAQPCRTEPIALPAGQQELLV 1140 Query 1155 SPGAAFVVDGAQLSTPGA-GLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINS 1213 SPGA FVVDG QL+ P A ++ A T A+TGAWGP REVRV RVLVVPES+N Sbjct 1141 SPGATFVVDGVQLAAPAARDITPAATTPADTGAWGPDRREVRVVPGQRDRVLVVPESVNP 1200 Query 1214 GWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLAL 1273 GW AR G LTP+ VNGWQQ WVVPA G +TL+F N+LYRA L GLALL L Sbjct 1201 GWQARGPGGDLLTPVVVNGWQQGWVVPADTEGAVTLSFRSNTLYRAGLIGGLALL-PLLA 1259 Query 1274 LAFWRTGRRQLADRPTPPWR-PGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRE 1332 L W RR+ D P PWR P AA GVL GAVI+ AGV+V+G LGVRY LR RE Sbjct 1260 LLVWLPARRRRDDEPGRPWRVPTVAAAVGVLGVGAVISGWAGVVVVGGVLGVRYLLRNRE 1319 Query 1333 RLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQ 1373 RL DR T+G+ AGGL LAGA LS+HPWRSVDGY G VQ Sbjct 1320 RLLDRFTLGVTAGGLTLAGAVLSQHPWRSVDGYVGFEPGVQ 1360 >gi|126432829|ref|YP_001068520.1| hypothetical protein Mjls_0216 [Mycobacterium sp. JLS] gi|126232629|gb|ABN96029.1| putative conserved transmembrane protein [Mycobacterium sp. JLS] Length=1384 Score = 1771 bits (4586), Expect = 0.0, Method: Compositional matrix adjust. Identities = 965/1361 (71%), Positives = 1099/1361 (81%), Gaps = 6/1361 (0%) Query 16 ALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFF 75 AL LTFAQSPGQ+SPDTKLDLTANPLRFLARA NLWNS+LPFGQAQNQAYGYLFPHGTFF Sbjct 3 ALVLTFAQSPGQISPDTKLDLTANPLRFLARAANLWNSELPFGQAQNQAYGYLFPHGTFF 62 Query 76 VIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTT 135 + G LLG+PGWVTQRLWWA+LLTVGFWG++RVAEALG+G P+SRV+GAVA+ALSPRVLTT Sbjct 63 LAGDLLGLPGWVTQRLWWALLLTVGFWGVVRVAEALGLGSPTSRVIGAVAYALSPRVLTT 122 Query 136 LGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIATLAGCL 195 LG++SSETLPMMLAPWVLLP ILALRG SVR LAA++ A+ALMGAVNA+ATL GCL Sbjct 123 LGALSSETLPMMLAPWVLLPVILALRGEG--SVRRLAARSAGAIALMGAVNAVATLTGCL 180 Query 196 PAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSGVTTQW 255 AV+WWACHRPNRLWWR+TAWW ALA LWWV+ L L +SPPFLDFIESSGVTTQW Sbjct 181 AAVLWWACHRPNRLWWRFTAWWFGCAALAVLWWVVPLLLLGRISPPFLDFIESSGVTTQW 240 Query 256 SSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPARGRLV 315 SL E+LRGT SWTPFVAP ATAG+ LVTGS A+L T LVAAAG+AGL +MPARGRL+ Sbjct 241 MSLTEMLRGTGSWTPFVAPTATAGSTLVTGSLAVLATTLVAAAGMAGLALRSMPARGRLI 300 Query 316 TMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGLAQLLS 375 TMLLVGV LLA G+ GGL SP A VQAFLD GTPLRN+ K+ PV+RLPL LG+ LL+ Sbjct 301 TMLLVGVALLAAGYAGGLGSPFADAVQAFLDGDGTPLRNLQKLDPVLRLPLALGVIHLLA 360 Query 376 RVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFGALPQY 435 R+PLPGSAPRP WL AFAHPE+D+RVAV +V L AL +TSLAWTGR+ PPG F A+P Y Sbjct 361 RIPLPGSAPRPVWLHAFAHPEKDRRVAVGIVVLAALTAATSLAWTGRLTPPGAFTAIPGY 420 Query 436 WQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDSIPLTP 495 W E A WL H+ PT GRVLV PGAPFATQVWG+SHDEPLQVLG+ PWGVRDSIPLTP Sbjct 421 WHETAAWLDAHNTGDPTAGRVLVAPGAPFATQVWGSSHDEPLQVLGESPWGVRDSIPLTP 480 Query 496 PQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLHRSIAG 555 P+TIRALDSVQRLFAAGRPSAGLADTLARQGISYV+VRNDLDPE+SRSARP+L+HR+I G Sbjct 481 PETIRALDSVQRLFAAGRPSAGLADTLARQGISYVVVRNDLDPESSRSARPVLVHRAIDG 540 Query 556 SPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATDQLARV 615 SPGL ++A+FG PVGP L GFV+DSGLRPRYPA+EIYRV A NP PY + +ARV Sbjct 541 SPGLTRVAQFGDPVGPGTLEGFVSDSGLRPRYPAVEIYRVDAQHNPSTPYLVDAEAMARV 600 Query 616 DGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYGRVDHH 675 DG PE LLRLDERRRL +PPLGP+L+TADA AGLP P V VTDTP ARETDYGRVD H Sbjct 601 DGAPEALLRLDERRRLLDRPPLGPMLLTADAERAGLPAPLVTVTDTPTARETDYGRVDDH 660 Query 676 SSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPASAPAA 735 SSAIR P D R+T+NRVPDYP GA+ V G WTGGR++VSSS+AD+TA+P VAPA+ P A Sbjct 661 SSAIRTPDDPRNTFNRVPDYPSAGADVVYGRWTGGRLSVSSSAADSTALPHVAPATGPTA 720 Query 736 AVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIETVNGS 795 A+D D +T+WVSNALQAA+GQWLQVDFD+PVTNA +T+TPSATAVGAQVRR+ + TVNG+ Sbjct 721 AIDADTSTSWVSNALQAALGQWLQVDFDKPVTNATITVTPSATAVGAQVRRMEVATVNGT 780 Query 796 TTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGFAHPVQ 855 +TLRF+EAGKPLT ALPYGETPWVR TA TDDGSAGVQFGITDL++TQYDA+GFA P+Q Sbjct 781 STLRFEEAGKPLTVALPYGETPWVRITATGTDDGSAGVQFGITDLSVTQYDANGFATPIQ 840 Query 856 LRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTV 915 LRHTV VPGPP GSA+ WDLGSELLGR GC PDGV+CAA+MAL+PEEP NLSRTL V Sbjct 841 LRHTVEVPGPPAGSAVGLWDLGSELLGRQGCVDSPDGVKCAAAMALSPEEPVNLSRTLAV 900 Query 916 PRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAP 975 P P SV P +WVR RQGP+LA+LI P TT +GD+D +D+LGS+YAA DGDP TAWTAP Sbjct 901 PAPTSVQPTLWVRARQGPRLAELIRQPDTTVVAGDADALDVLGSSYAAGDGDPRTAWTAP 960 Query 976 QRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQ-VGEL 1034 QRVVQH+TPPTLTL LP PT V LR+ S++ PAHP +VA++LG+GPQ R+L G+ Sbjct 961 QRVVQHRTPPTLTLRLPAPTEVAALRITPSKTEPPAHPRMVAVDLGNGPQARRLSGDGDT 1020 Query 1035 TTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPADAARN 1094 T+ L P TDT++VSLLDW+D+IDR +LGFDQLKPPGLAEV L G PI ADA N Sbjct 1021 ETIRLTPHRTDTIAVSLLDWNDIIDRTSLGFDQLKPPGLAEVTALDRRGDPIGAADAGEN 1080 Query 1095 RARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLI 1154 R R + V C GP++ VAG+FV T + TVGALLDG PV A PC EPIALPAGQQELL+ Sbjct 1081 RGRTVDVPCGAGPIIGVAGQFVPTRVTATVGALLDGAPVLARPCRTEPIALPAGQQELLV 1140 Query 1155 SPGAAFVVDGAQLSTPGA-GLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINS 1213 SPGA FVVDG QL+ P A ++ A T A+TGAWGP REVRV RVLVVPES+N Sbjct 1141 SPGATFVVDGVQLAAPAARDITPAPTTPADTGAWGPDRREVRVVPGQRDRVLVVPESVNP 1200 Query 1214 GWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLAL 1273 GW AR S G LTP+ VNGWQQ WVVPA G +TL+F N+LYRA L GLALL L Sbjct 1201 GWQARGSGGDLLTPVVVNGWQQGWVVPADTEGAVTLSFRSNTLYRAGLIGGLALL-PLLA 1259 Query 1274 LAFWRTGRRQLADRPTPPWR-PGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRE 1332 L W RR+ D P PWR P AA GVLA GAVI+ AGV+V+G LGVRY LR R Sbjct 1260 LLVWLPARRRRDDEPAHPWRVPAVAAAGGVLAVGAVISGWAGVVVVGGVLGVRYLLRNRS 1319 Query 1333 RLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQ 1373 RL DR T+G+ AGGL LAGA LS+HPWRSVDGY G VQ Sbjct 1320 RLLDRFTLGVTAGGLTLAGAVLSQHPWRSVDGYVGFEPGVQ 1360 >gi|120401279|ref|YP_951108.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1] gi|119954097|gb|ABM11102.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii PYR-1] Length=1408 Score = 1705 bits (4416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 955/1379 (70%), Positives = 1094/1379 (80%), Gaps = 26/1379 (1%) Query 16 ALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFF 75 AL LTFAQSPGQ+SPDTKLDLTANP RFLARA NLWNS+LPFGQAQNQAYGYLFPHGTFF Sbjct 6 ALVLTFAQSPGQISPDTKLDLTANPQRFLARAFNLWNSELPFGQAQNQAYGYLFPHGTFF 65 Query 76 VIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTT 135 + G +LGVPGWVTQRLWWA+LL VGFWG+LR+AEALG+G +SRV+GA+A+ALSPRVLTT Sbjct 66 LAGDVLGVPGWVTQRLWWALLLVVGFWGMLRLAEALGIGSTTSRVIGALAYALSPRVLTT 125 Query 136 LGSISSETLPMMLAPWVLLPTILALRGTSG------------------RSVRALAAQAGL 177 +G+ISSETLPMMLAPWVLLP +L L+G SG VR LAA++ L Sbjct 126 IGAISSETLPMMLAPWVLLPVVLVLQGGSGGVGETQGGSGGVGETQGDTRVRQLAARSAL 185 Query 178 AVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHG 237 AVALMGAVNA+ATL CL AV+W CHRPNR WWR+ AWWL +ALA WWV+AL L Sbjct 186 AVALMGAVNAVATLTACLCAVVWLLCHRPNRTWWRFVAWWLPCVALAVTWWVVALLHLGR 245 Query 238 VSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAA 297 +SPPFLDFIESSGVTTQW SL E+LRGT +WTP+VAP ATAGAPLVTGS A+L T LVAA Sbjct 246 ISPPFLDFIESSGVTTQWMSLTEMLRGTGAWTPYVAPTATAGAPLVTGSVAVLATTLVAA 305 Query 298 AGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHK 357 GLAGL MPARGRLVTMLLVGVVLLA G+ GGL SPVA VQAFLDA GTPLRN+HK Sbjct 306 GGLAGLALATMPARGRLVTMLLVGVVLLAAGYSGGLGSPVAQHVQAFLDADGTPLRNLHK 365 Query 358 VGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSL 417 + P++RLPL LGLA LL R+PLPGS PRP W AFAHPE DKRVAV +V L+AL +T+L Sbjct 366 LDPLLRLPLALGLAHLLGRIPLPGSVPRPVWRDAFAHPENDKRVAVGIVLLSALTAATAL 425 Query 418 AWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPL 477 AWTGR+ PPG F +PQYW + A WL +++ GRVLV PGAPFATQVWG SHDEPL Sbjct 426 AWTGRLTPPGAFDTIPQYWHDTAAWLDDNNSG----GRVLVAPGAPFATQVWGNSHDEPL 481 Query 478 QVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLD 537 QVLGD WGVRDSIPLTPP+TIRALDSVQRLFAAGRPSAGLA+TLARQGISYV+VRNDLD Sbjct 482 QVLGDSAWGVRDSIPLTPPETIRALDSVQRLFAAGRPSAGLAETLARQGISYVVVRNDLD 541 Query 538 PETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSA 597 P+ SRS RPIL+HR+I SPGL K+AEFG PVGP + GFV+DSGLRPRY +EIYRV Sbjct 542 PDASRSVRPILVHRAIDASPGLTKVAEFGDPVGPGTVEGFVSDSGLRPRYRGVEIYRVDR 601 Query 598 PANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVA 657 P + PY TD +ARVDGGPE LLRLDERRRL G+ PLGP+L+T DA AGLP P V Sbjct 602 PGSL-QPYVVDTDTMARVDGGPEALLRLDERRRLAGEAPLGPMLLTQDATRAGLPAPLVT 660 Query 658 VTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSS 717 VTDTP ARETDYGRVD HSSAIR P DAR+T+NRVPDYP GA+ V G W GGR++VSS+ Sbjct 661 VTDTPTARETDYGRVDDHSSAIRGPDDARNTFNRVPDYPSTGADLVYGQWDGGRLSVSSA 720 Query 718 SADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSA 777 ++D+TA+P+V+P+S PA+A+DGD +T+WVSNALQ AVGQWLQVDFD PVTNA +T+TPSA Sbjct 721 ASDSTALPNVSPSSGPASAIDGDSSTSWVSNALQTAVGQWLQVDFDHPVTNATLTITPSA 780 Query 778 TAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGI 837 TAVGAQVRR+ + T NG++T+RF+ AG+PLT ALPYGE PWVR TA ATDDGS GVQFGI Sbjct 781 TAVGAQVRRLEVSTPNGTSTVRFERAGEPLTVALPYGEAPWVRITATATDDGSPGVQFGI 840 Query 838 TDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAA 897 TD+++TQYDA+GFAHPV LRHTV VPGPPPGSA+A WDLGSELLGR GCA P G RCAA Sbjct 841 TDISVTQYDANGFAHPVNLRHTVDVPGPPPGSAVAQWDLGSELLGRAGCAQSPTGTRCAA 900 Query 898 SMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDIL 957 +MALA EEP NLSRTLTVP P VTP VWVR RQGP LADLIA P TRA GDSDL+D+L Sbjct 901 AMALAAEEPVNLSRTLTVPGPTPVTPTVWVRGRQGPNLADLIAQPGRTRAVGDSDLIDVL 960 Query 958 GSAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVA 1017 GSAYAAADGDP TAWTAPQR++Q +TPP+L L LP V+ +R+ S S LPA PT++A Sbjct 961 GSAYAAADGDPGTAWTAPQRMMQPRTPPSLVLKLPEEKEVSAIRVTPSSSPLPARPTLIA 1020 Query 1018 INLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVV 1077 ++LGDGPQVR++ G T LHPR TD+V++ LLDWDDVIDR ALGFDQLKPPGLAE+V Sbjct 1021 VDLGDGPQVRRMTAGA-ETFRLHPRTTDSVTIWLLDWDDVIDRTALGFDQLKPPGLAEIV 1079 Query 1078 VLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALP 1137 VL GAPI ADA NRAR +++ C GPV+ VAG FV TS+ TTVGALLDG P+ A P Sbjct 1080 VLDDRGAPIGAADATANRARTVSLPCGRGPVIGVAGEFVQTSVTTTVGALLDGRPIPARP 1139 Query 1138 CEREPIALPAGQQELLISPGAAFVVDGAQLSTPGAG-LSSATVTSAETGAWGPTHREVRV 1196 C EPI LPAGQQELL+SPG A +VDG QL+TP G + SAT + TGAWG HREV V Sbjct 1140 CRTEPIPLPAGQQELLVSPGPAMIVDGVQLATPRTGEVGSATTSPVSTGAWGSAHREVIV 1199 Query 1197 PESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSL 1256 S SR+LVVPES N GWVAR++ G LTP+AVNGWQQ WV+PAG GT+TL FA N+ Sbjct 1200 EGSGVSRILVVPESANPGWVARSADGVALTPVAVNGWQQGWVLPAGTSGTVTLDFASNAT 1259 Query 1257 YRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAW-AAAGVLAAGAVIASIAGV 1315 YRA L GLALLPLL +LAF R A +P PWRP AAG AA VI+ GV Sbjct 1260 YRAGLIGGLALLPLLLVLAFVPARRPGPAAQPVHPWRPRPLAIAAGTAAAAGVISGFVGV 1319 Query 1316 MVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQL 1374 +V A+G+RY LR R +RD +TVG AA GLILAGAALS++PWRSVDGY G+ A VQ Sbjct 1320 VVACVAVGIRYLLRGRAGVRDALTVGTAAFGLILAGAALSQNPWRSVDGYVGHSAGVQF 1378 >gi|289441612|ref|ZP_06431356.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T46] gi|289414531|gb|EFD11771.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T46] Length=989 Score = 1677 bits (4342), Expect = 0.0, Method: Compositional matrix adjust. Identities = 977/978 (99%), Positives = 977/978 (99%), Gaps = 0/978 (0%) Query 423 VAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGD 482 VAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGD Sbjct 12 VAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGD 71 Query 483 GPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSR 542 GPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSR Sbjct 72 GPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSR 131 Query 543 SARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPG 602 SARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPG Sbjct 132 SARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPG 191 Query 603 APYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTP 662 APYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTP Sbjct 192 APYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTP 251 Query 663 VARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADAT 722 VARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADAT Sbjct 252 VARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADAT 311 Query 723 AMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGA 782 AMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGA Sbjct 312 AMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGA 371 Query 783 QVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAI 842 QVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAI Sbjct 372 QVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAI 431 Query 843 TQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALA 902 TQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALA Sbjct 432 TQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALA 491 Query 903 PEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYA 962 PEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYA Sbjct 492 PEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYA 551 Query 963 AADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGD 1022 AADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGD Sbjct 552 AADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGD 611 Query 1023 GPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAG 1082 GPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL AG Sbjct 612 GPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLGAG 671 Query 1083 GAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREP 1142 GAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREP Sbjct 672 GAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREP 731 Query 1143 IALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATS 1202 IALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATS Sbjct 732 IALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATS 791 Query 1203 RVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLA 1262 RVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLA Sbjct 792 RVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLA 851 Query 1263 IGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTAL 1322 IGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTAL Sbjct 852 IGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTAL 911 Query 1323 GVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSV 1382 GVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSV Sbjct 912 GVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSV 971 Query 1383 VAASVVATSESRGQDRMQ 1400 VAASVVATSESRGQDRMQ Sbjct 972 VAASVVATSESRGQDRMQ 989 >gi|145221022|ref|YP_001131700.1| hypothetical protein Mflv_0418 [Mycobacterium gilvum PYR-GCK] gi|145213508|gb|ABP42912.1| putative conserved transmembrane protein [Mycobacterium gilvum PYR-GCK] Length=1347 Score = 1643 bits (4255), Expect = 0.0, Method: Compositional matrix adjust. Identities = 896/1326 (68%), Positives = 1031/1326 (78%), Gaps = 35/1326 (2%) Query 83 VPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTTLGSISSE 142 +PGWVTQRLWWA+LL VGFWG+LRV+EALG+G +RV+GAVA+ALSPRVLTTLG+ISSE Sbjct 1 MPGWVTQRLWWALLLVVGFWGVLRVSEALGIGTTPARVIGAVAYALSPRVLTTLGAISSE 60 Query 143 TLPMMLAPWVLLPTILALRGTS----------------------------GRSVRALAAQ 174 TLPMMLAPWVLLP ILAL+G S GR +R LAA+ Sbjct 61 TLPMMLAPWVLLPVILALQGGSGGVGRAQGGSGGVGRAQGGSGGVGRAQNGRRIRTLAAR 120 Query 175 AGLAVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQ 234 + LA+ALMGAVNA+ATL CL A +W CHRPNR+WWR+ AWWL +ALA WWV+AL Sbjct 121 SALAIALMGAVNAVATLTACLCAAVWLLCHRPNRVWWRFVAWWLPCVALAVTWWVIALLH 180 Query 235 LHGVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCL 294 L +SPPFLDFIESSGVTT+W SL E+LRGT +WTP+VAP ATAGAPLVTGS A+L T L Sbjct 181 LGRISPPFLDFIESSGVTTRWMSLTEMLRGTGAWTPYVAPTATAGAPLVTGSVAVLATTL 240 Query 295 VAAAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRN 354 VAA GLAGL MPARGRL+TMLLVGVVLLA + GGL SP+AH VQ FLDA GTPLRN Sbjct 241 VAAGGLAGLAMTRMPARGRLITMLLVGVVLLASTYSGGLGSPIAHAVQIFLDADGTPLRN 300 Query 355 VHKVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVS 414 +HK+ P++RLPL LGL LL R+PLPGS RP W AFAHPE D+RVAV +V L AL + Sbjct 301 LHKLEPLLRLPLALGLIYLLGRIPLPGSVARPVWRDAFAHPENDRRVAVGIVLLAALTAA 360 Query 415 TSLAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHD 474 TSLAWTGR+ PPGTF A+PQYW + ADWL ++ T GRVLV PGAPFATQVWG SHD Sbjct 361 TSLAWTGRLTPPGTFDAIPQYWHDTADWLDDNN----TGGRVLVAPGAPFATQVWGNSHD 416 Query 475 EPLQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRN 534 EPLQVLGD WGVRDSIPLTPP+TIRALDSVQRLFAAGRPS GLADTLARQGISYV+VRN Sbjct 417 EPLQVLGDSAWGVRDSIPLTPPETIRALDSVQRLFAAGRPSDGLADTLARQGISYVVVRN 476 Query 535 DLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYR 594 DLDPETSRSARPIL+HR++ GSPGL ++A FG PVGP L GFV DSGLRPRYPA+EIYR Sbjct 477 DLDPETSRSARPILVHRAVDGSPGLTRVASFGDPVGPGTLDGFVADSGLRPRYPAVEIYR 536 Query 595 VSAPANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVP 654 V +P + PY A D +ARVDGGPE L+RLDERRRL G+P LGPVL+T DA AGLP P Sbjct 537 VDSPGSL-TPYVAEADSMARVDGGPESLMRLDERRRLTGEPALGPVLLTQDAARAGLPAP 595 Query 655 QVAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITV 714 V VTDTP ARETDYGRVD HSSAIR P DAR+T+NRVPDYP GA+ V G W GGR+TV Sbjct 596 LVTVTDTPTARETDYGRVDDHSSAIRGPDDARNTFNRVPDYPSEGADLVYGQWDGGRVTV 655 Query 715 SSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLT 774 SS+++D+TA+P+V+P+S PA+A+DGD +T+WVSNALQ A+GQWLQVDFD PVTNA +T+T Sbjct 656 SSAASDSTALPNVSPSSGPASAIDGDTSTSWVSNALQTAIGQWLQVDFDLPVTNATLTIT 715 Query 775 PSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQ 834 PSATAVGAQVRR+ + TVNG+T++RF+EAGKPLT ALPYGE+PWVR TA TDDGS GVQ Sbjct 716 PSATAVGAQVRRMEVSTVNGTTSVRFEEAGKPLTVALPYGESPWVRITATGTDDGSPGVQ 775 Query 835 FGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVR 894 FG+TD+ +TQYDA+GFAHPV LRHTV VPGPPPGSA+A WDLGSELL R GCA P G+R Sbjct 776 FGLTDINVTQYDANGFAHPVTLRHTVDVPGPPPGSAVAQWDLGSELLARAGCAESPTGIR 835 Query 895 CAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLV 954 CAA+MALA EEPANLSRTL VP P+ VTP VWVR RQGP+LADL+A P TTRA GDSD + Sbjct 836 CAAAMALASEEPANLSRTLAVPEPIEVTPTVWVRARQGPQLADLVAQPGTTRAVGDSDPI 895 Query 955 DILGSAYAAADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPT 1014 D+LGSAYAAADGDP T+WTAPQR VQ TPP+L L LP P V G+RL S S LPAHP Sbjct 896 DVLGSAYAAADGDPGTSWTAPQRSVQPHTPPSLVLRLPEPRNVAGIRLTPSSSALPAHPR 955 Query 1015 VVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLA 1074 ++A++LGDGPQVR++ TL LHPRVTD+V+V L+DWDDVIDRNALGFDQLKPPGLA Sbjct 956 MIAVDLGDGPQVRRMSADGTQTLDLHPRVTDSVTVWLMDWDDVIDRNALGFDQLKPPGLA 1015 Query 1075 EVVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVA 1134 E VL G PI ADAA NR R +++ C GPV+ VAG FV TS+ TTVG LL G PV Sbjct 1016 EATVLDDRGQPIGAADAAANRERTVSLPCGRGPVIGVAGEFVQTSVTTTVGDLLAGRPVP 1075 Query 1135 ALPCEREPIALPAGQQELLISPGAAFVVDGAQLSTPGAG-LSSATVTSAETGAWGPTHRE 1193 A PC +PI LPAGQQELLISPG A +VDG QLST AG + SAT +S WGP RE Sbjct 1076 AQPCRDQPIRLPAGQQELLISPGGALIVDGVQLSTARAGEIGSATTSSVTINRWGPADRE 1135 Query 1194 VRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAP 1253 V P S +++VLVVPES+N GWVAR ++GA L P+ VNGWQQ WV+P G +TL F Sbjct 1136 VSTPPSESTQVLVVPESVNPGWVARAASGATLNPVTVNGWQQGWVLPPDTEGPVTLHFTS 1195 Query 1254 NSLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWR-PGAWAAAGVLAAGAVIASI 1312 NS YRA L GLALLPLL +LAF A PW+ P A A VI+ + Sbjct 1196 NSTYRAGLIGGLALLPLLLVLAFVPVRAGAAAGAAARPWQPPAVAVGAAAAVAATVISGV 1255 Query 1313 AGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASV 1372 G++V G ALGVRY LRRRERL DR+TVG+AA GLILAGA LS +PWRSVDGY G+ A V Sbjct 1256 GGLLVTGVALGVRYLLRRRERLVDRLTVGVAASGLILAGAVLSGNPWRSVDGYVGHSAGV 1315 Query 1373 QLLALI 1378 Q LAL+ Sbjct 1316 QFLALL 1321 >gi|289764352|ref|ZP_06523730.1| integral membrane protein [Mycobacterium tuberculosis GM 1503] gi|289711858|gb|EFD75874.1| integral membrane protein [Mycobacterium tuberculosis GM 1503] Length=832 Score = 1611 bits (4171), Expect = 0.0, Method: Compositional matrix adjust. Identities = 830/832 (99%), Positives = 831/832 (99%), Gaps = 0/832 (0%) Query 569 VGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATDQLARVDGGPEVLLRLDER 628 +GPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATDQLARVDGGPEVLLRLDER Sbjct 1 MGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATDQLARVDGGPEVLLRLDER 60 Query 629 RRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHT 688 RRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHT Sbjct 61 RRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHT 120 Query 689 YNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSN 748 YNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSN Sbjct 121 YNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSN 180 Query 749 ALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLT 808 ALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLT Sbjct 181 ALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLT 240 Query 809 AALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPG 868 AALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPG Sbjct 241 AALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPG 300 Query 869 SAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVR 928 SAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVR Sbjct 301 SAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVR 360 Query 929 PRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTPPTLT 988 PRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTPPTLT Sbjct 361 PRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTPPTLT 420 Query 989 LTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVS 1048 LTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVS Sbjct 421 LTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVS 480 Query 1049 VSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPADAARNRARALTVDCDHGPV 1108 VSLLDWDDVIDRNALGFDQLKPPGLAEVVVL AGGAPIAPADAARNRARALTVDCDHGPV Sbjct 481 VSLLDWDDVIDRNALGFDQLKPPGLAEVVVLGAGGAPIAPADAARNRARALTVDCDHGPV 540 Query 1109 VAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLS 1168 VAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLS Sbjct 541 VAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLS 600 Query 1169 TPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPI 1228 TPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPI Sbjct 601 TPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPI 660 Query 1229 AVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRP 1288 AVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRP Sbjct 661 AVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRP 720 Query 1289 TPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLI 1348 TPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLI Sbjct 721 TPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLI 780 Query 1349 LAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRMQ 1400 LAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRMQ Sbjct 781 LAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRMQ 832 >gi|169631546|ref|YP_001705195.1| hypothetical protein MAB_4472 [Mycobacterium abscessus ATCC 19977] gi|169243513|emb|CAM64541.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=1410 Score = 1593 bits (4126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 867/1397 (63%), Positives = 1033/1397 (74%), Gaps = 10/1397 (0%) Query 4 LSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQ 63 LSR+WL V AV+L LTF+QSPGQ+SPDTKLDL NPLRF ARA NLW+SDLPFGQAQNQ Sbjct 10 LSRRWLAVAAAVSLLLTFSQSPGQISPDTKLDLAINPLRFAARALNLWSSDLPFGQAQNQ 69 Query 64 AYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGA 123 AYGYLFPHG FF +GHLLGVP WVTQRLWWA+L+ GFWGL+RVAEALG+G SR++ A Sbjct 70 AYGYLFPHGAFFSLGHLLGVPAWVTQRLWWALLIVAGFWGLIRVAEALGIGTRGSRIIAA 129 Query 124 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMG 183 VAFALSPRVLTTLG+ISSETLPMMLAPWVLLP IL +G S R AA + +AVALMG Sbjct 130 VAFALSPRVLTTLGAISSETLPMMLAPWVLLPLILTFQGR--MSPRRAAALSAVAVALMG 187 Query 184 AVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFL 243 AVNA+AT C AVIWW HRPNR WWR+TAWW+ +ALA+ WW++AL +SP FL Sbjct 188 AVNAVATALACGVAVIWWLAHRPNRTWWRFTAWWIPCLALASTWWIVALLIFGKISPKFL 247 Query 244 DFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGL 303 DFIESSGVTTQW+SL EVLRGTDSWTPFVAP ATAG+ LVT SA ++ T ++AAAG+AGL Sbjct 248 DFIESSGVTTQWTSLTEVLRGTDSWTPFVAPTATAGSSLVTQSAMVIATTMLAAAGMAGL 307 Query 304 TSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIR 363 MPARGRLV +LL+G+VLL G+ G L SP+A +Q FLD GTPLRNVHK+ P+IR Sbjct 308 AMRGMPARGRLVAVLLIGLVLLTAGYTGALGSPIAQQIQFFLDDGGTPLRNVHKLEPLIR 367 Query 364 LPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRV 423 LPL+LGLA LSR+PLP S P WL A A PER++ VA A+V L AL STSLAWTGR+ Sbjct 368 LPLILGLAHALSRIPLPASVPVRQWLSALARPERNRAVAFAIVLLVALAASTSLAWTGRL 427 Query 424 APPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDG 483 P G F A+P YW + A WL H T GR LVVPGAPFA Q WG + DEPLQ LG Sbjct 428 VPRGGFDAIPGYWNDTAHWLADHD----TGGRALVVPGAPFAIQTWGLTRDEPLQALGQT 483 Query 484 PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRS 543 PWGVRDSIPLTPP+TIRA+DSVQ+LFAAGRPS GLADTL QGISY++VRNDLDP+TSRS Sbjct 484 PWGVRDSIPLTPPETIRAIDSVQQLFAAGRPSDGLADTLREQGISYLVVRNDLDPDTSRS 543 Query 544 ARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGA 603 ARPIL+H +I GSPGL K+A+FG PVG + GFV DS LRP+YPA+EIY V A + G Sbjct 544 ARPILVHHTIEGSPGLTKVAQFGDPVGAGAVEGFVADSDLRPQYPAVEIYAVGANDHDGE 603 Query 604 PYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPV 663 PYF D + RV GGPE LLRL+ERRR +PPLGP L+ DA AGL VTDTP+ Sbjct 604 PYFTDIDTMPRVAGGPEALLRLNERRRQLNEPPLGPSLLATDAAQAGLRPGPAVVTDTPL 663 Query 664 ARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATA 723 ARETDYGRVD HSSAIRAPGD R T+NRVPDYP G V G WTGG IT SSS++D+TA Sbjct 664 ARETDYGRVDDHSSAIRAPGDKRRTFNRVPDYPATGVPLVNGSWTGGTITASSSASDSTA 723 Query 724 MPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQ 783 +P+VAP ++ AAA+D D AT+WVS++L+AA+GQW+++D DRP+TNA++T+TPSATA+GAQ Sbjct 724 LPNVAPGTSTAAAIDRDNATSWVSSSLEAALGQWIRIDLDRPITNAILTVTPSATALGAQ 783 Query 784 VRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAIT 843 VRR+ +ET NG+T++RFDE G+PL AL GET WV+ TA TDDG++GVQFG+T+L++T Sbjct 784 VRRLEVETDNGTTSVRFDEPGQPLNIALRPGETTWVKVTATGTDDGTSGVQFGVTELSLT 843 Query 844 QYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAP 903 QYDA+GFAH V LRH+ VP PP G GWDLGS L GR GCAP P +RCAA+++LAP Sbjct 844 QYDAAGFAHTVDLRHSATVPPPPAGDNPLGWDLGSPLQGRSGCAPSPQRLRCAATLSLAP 903 Query 904 EEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAA 963 EEP RTLTVP+PVS+TP +WVR R GP+L DLI P TT A+GDSD++D GS+YAA Sbjct 904 EEPGTFIRTLTVPQPVSLTPRLWVRARPGPQLRDLIQQPGTTVATGDSDVIDPQGSSYAA 963 Query 964 ADGDPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDG 1023 DGDP T WTAPQ VQ P+L + LP+PT + +RL SR+ +PAHP VAINLGDG Sbjct 964 TDGDPGTVWTAPQDSVQRLHLPSLVIKLPKPTAIGAIRLRPSRTEVPAHPKQVAINLGDG 1023 Query 1024 PQVRQLQ-VGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAG 1082 PQ+R + ++T L LHP +TDT++V++ DW D+IDR ALGFDQLKPPG+AEV+ L A Sbjct 1024 PQLRSIDPKADVTELALHPSITDTITVTVTDWTDIIDRTALGFDQLKPPGIAEVIALDAD 1083 Query 1083 GAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREP 1142 PIAPAD A N R +T+ C+ GP++A+AGRFV SI TV LLDG + A PC+ P Sbjct 1084 HRPIAPADNAANSKRKITIGCNRGPILALAGRFVPMSITATVRELLDGTVIQATPCDTSP 1143 Query 1143 IALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATS 1202 IA AG Q++ ++P F+VDG QL+ +SAT+T A GAWGP REV SA Sbjct 1144 IATGAGIQDVTVNPSQQFIVDGVQLTAAATEPASATMTVAPKGAWGPDRREVTAEPSAHE 1203 Query 1203 RVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLA 1262 RVL VPESIN GW AR + G LTP+ VNGWQQ WV+PAG+ G ITLTF N+ YRA L Sbjct 1204 RVLAVPESINPGWAARDAQGHLLTPVRVNGWQQGWVLPAGDGGKITLTFGLNTWYRAGLF 1263 Query 1263 IGLALLPLLALLAFW-RTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTA 1321 GLALLP+LA LA GR L P PW G A VLAA I+ I+G+ V A Sbjct 1264 GGLALLPILACLALLPARGRTTLP--PVAPWCAGPAAGVAVLAALTAISGISGMAVGLAA 1321 Query 1322 LGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVS 1381 L + R R V LA G L+LAGAALSRHPWRSV GY G+ +QLLALISV+ Sbjct 1322 LAFKVWTRWPLRAVTAAGVYLAGGSLLLAGAALSRHPWRSVGGYTGHSWWIQLLALISVA 1381 Query 1382 VVAASVVATSESRGQDR 1398 VA + V R R Sbjct 1382 SVALAAVRLPSRRCWKR 1398 >gi|229494120|ref|ZP_04387883.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229318482|gb|EEN84340.1| putative membrane protein [Rhodococcus erythropolis SK121] Length=1444 Score = 1325 bits (3428), Expect = 0.0, Method: Compositional matrix adjust. Identities = 730/1406 (52%), Positives = 926/1406 (66%), Gaps = 31/1406 (2%) Query 3 PLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQN 62 PLS++WL VA LTF QSPG ++ DTK DLT NP FL RA++ W+S P GQ QN Sbjct 12 PLSKRWLFGASVVAFLLTFLQSPGLITADTKYDLTQNPFGFLERASHQWSSQAPLGQVQN 71 Query 63 QAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVG 122 QAYGY FPHG FF +G L VP WVTQR+WWA+LL GFWG++RVAEALG+G SSRV+ Sbjct 72 QAYGYFFPHGPFFALGELANVPPWVTQRIWWALLLIAGFWGIIRVAEALGIGSRSSRVIA 131 Query 123 AVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILAL-----RGTSG-----RSVRALA 172 AVAF LSPRVLTTLGSISSETLPMMLAPWVLLP +LA +G G R +R LA Sbjct 132 AVAFVLSPRVLTTLGSISSETLPMMLAPWVLLPVVLAFGPVRGKGVPGLPDHSRGLRRLA 191 Query 173 AQAGLAVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMAL 232 AQ+ LAVALMG++NA+AT A CL A+IWW H+PNR W +TAWW L +AL TLWW++ L Sbjct 192 AQSALAVALMGSINAVATAAACLVAIIWWLSHKPNRTWLTFTAWWALFVALGTLWWIVPL 251 Query 233 TQLHGVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGT 292 L +SPPFLD+IES+GVTTQW+SL E+LRGTDSWTPFV+P AGA LVT AA++ T Sbjct 252 LLLGKISPPFLDYIESAGVTTQWASLAEILRGTDSWTPFVSPERIAGAVLVTQPAAVVAT 311 Query 293 CLVAAAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPL 352 LVAAAGLAGL +MPARGRL +L VG+ LA G+ G L+SPV+ V+ FLD+AG PL Sbjct 312 GLVAAAGLAGLCMRSMPARGRLTLILFVGITGLAAGYVGELSSPVSESVRLFLDSAGAPL 371 Query 353 RNVHKVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALM 412 RNVHK+ P++RLPLVLGLA LL++VPLPGS P W RAFAHPER+ VA+ + L AL Sbjct 372 RNVHKLEPLVRLPLVLGLAHLLAKVPLPGSVPLARWRRAFAHPEREPMVALTSLILVALT 431 Query 413 VSTSLAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTS 472 +ST+LAWTG++AP G + +P YW EAA WL + + R LVVPGAPF +QVWG + Sbjct 432 LSTALAWTGKLAPRGAYPDVPSYWNEAAQWLEDNTSPGSEAERALVVPGAPFGSQVWGLT 491 Query 473 HDEPLQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLV 532 DEPLQ L PW VRDS+PLTPP IRALDSVQRL A GRPS GLA TL QGI Y+++ Sbjct 492 RDEPLQALASTPWAVRDSVPLTPPGAIRALDSVQRLIADGRPSDGLAQTLLGQGIHYLVM 551 Query 533 RNDLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEI 592 RNDLD ETSRSARPIL+H+++ GSP + ++A FG P+P+ G V DS LRP YPAIEI Sbjct 552 RNDLDGETSRSARPILVHQAVEGSPEIKRVAHFGEDDSPEPIEGLVADSDLRPGYPAIEI 611 Query 593 YRVSAPANPGA---PYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAA 649 + V+ P A PY +Q+ RV GGPE +RL E + G GP+++ ADA AA Sbjct 612 FEVTPPDGTPAVSGPYSVDLNQVPRVQGGPESSVRLHESGLVPGT---GPMILAADAEAA 668 Query 650 GLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTG 709 GLPV V VTDTP RETD+G+VD+HSSA+R P DAR TYN VPDYPV V G W G Sbjct 669 GLPVDSVTVTDTPRDRETDFGQVDNHSSALRTPDDARRTYNLVPDYPVANTPLVEGRWIG 728 Query 710 GRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNA 769 ITVSS+++DAT + +P+S+PA+ VDGDPAT W SN ++ A+GQWLQ+DFD P+++ Sbjct 729 ASITVSSAASDATQLGGTSPSSSPASTVDGDPATGWFSNGIERALGQWLQIDFDTPISSG 788 Query 770 VVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDG 829 ++ LT SA A+GA V+ + + T NGST ++ + G+P+T ++P G TPWVR TA T++G Sbjct 789 LLHLTTSAAAIGAPVKWLEVSTPNGSTAVKVERPGEPITVSIPGGNTPWVRITATHTENG 848 Query 830 SAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPG 889 S G QFGI++L++ + V +R ++P P G+++ W+L E GR CA Sbjct 849 SPGTQFGISELSVEDFSDRSAPKTVPIRFDTVLPSTPTGASVNAWNLSQEFPGRNACADS 908 Query 890 PDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASG 949 D VRC+ + PEEP+ RTLTVP V P + VR RQG L DL++ P ASG Sbjct 909 TDRVRCSNAFMAIPEEPSRFQRTLTVPENTVVAPTLTVRARQGNALEDLLSVPGRITASG 968 Query 950 DSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTP-PTLTLTLPRPTVVTGLRLAASRSM 1008 SD+ D GSA+AA DGD T W+APQR + P PTLTL LP PT+VTGL + Sbjct 969 SSDIGDTRGSAFAATDGDARTTWSAPQRTTEPGGPKPTLTLNLPEPTLVTGLDITRGLGT 1028 Query 1009 LPAHPTVVAINLGDGPQVRQL-----QVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNAL 1063 LP+ PT VA+NLG+GPQVR+L + + L P VTD + +S+ DW+ V+D+ AL Sbjct 1029 LPSLPTSVAVNLGNGPQVRELPEPSNDTPRTSRVTLSPFVTDKIVLSITDWEPVLDQTAL 1088 Query 1064 GFDQLKPPGLAEVVVLSAGGAPIAPADAARNRA---RALTVDCDHGPVVAVAGRFVHTSI 1120 GF Q +P GLAEV V+ A G PIA + A R +TV C GP ++VAG+ TSI Sbjct 1089 GFAQAQPTGLAEVGVIGADGTPIADSGVQDTNALDNRTVTVTCGDGPTISVAGQQFPTSI 1148 Query 1121 RTTVGALLDGEPVAALPCEREPIA-LPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATV 1179 T L G PV A C + A LPAGQ E+++ PG AF VD L+ G + Sbjct 1149 TATATQLRTGAPVEARVCGLDASATLPAGQPEVVVEPGPAFSVDNLDLTAVGRSAAQRN- 1207 Query 1180 TSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVV 1239 T E+ AW HRE+ V S+ +++V PES + GW+A G+ LTP+ VNGWQQ W+V Sbjct 1208 TPLESTAWTANHRELTVTNSSADQLIVNPESTSIGWIATAPDGSELTPVVVNGWQQGWIV 1267 Query 1240 PAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAA 1299 PAG GT+T+ F + YR + GL LL L A T R + P PWR A Sbjct 1268 PAGTAGTVTIDFPSDRWYRLGIFGGLVLLIPLLFAALVPTRREPKSLTPPRPWRSVAAGC 1327 Query 1300 AGVLAAGAVIASIAG--VMVMGTALGVRYALRRRERLRD-RVTVGLAAGGLILAGAALSR 1356 GVLAA VI G + V+ + LG+ ALR R R+ VG A ++ LS Sbjct 1328 VGVLAAATVIGGGVGAAIAVVCSILGL-AALRFFGPARTARILVGTAGVAAMIGITLLST 1386 Query 1357 HPWRSVDGYAGNWASVQLLALISVSV 1382 PWR+ GY G+ ++Q L+++ V Sbjct 1387 GPWRAPGGYVGDSFAIQFSMLVALVV 1412 >gi|226304602|ref|YP_002764560.1| hypothetical protein RER_11130 [Rhodococcus erythropolis PR4] gi|226183717|dbj|BAH31821.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=1444 Score = 1315 bits (3403), Expect = 0.0, Method: Compositional matrix adjust. Identities = 728/1406 (52%), Positives = 924/1406 (66%), Gaps = 31/1406 (2%) Query 3 PLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQN 62 PLS++WL VA LTF QSPG ++ DTK DLT NP FL RA++ W+S P GQ QN Sbjct 12 PLSKRWLFGASVVAFLLTFLQSPGLITADTKYDLTQNPFGFLERASHQWSSQAPLGQVQN 71 Query 63 QAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVG 122 QAYGY FPHG FF +G L VP W TQR+WWA+LL GFWG++RVAEALG+G SSRV+ Sbjct 72 QAYGYFFPHGPFFALGELANVPPWFTQRIWWALLLIAGFWGIIRVAEALGIGSRSSRVIA 131 Query 123 AVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILAL-----RGTSG-----RSVRALA 172 AVAF LSPRVLTTLGSISSETLPMMLAPWVLLP ILA +G G R +R LA Sbjct 132 AVAFVLSPRVLTTLGSISSETLPMMLAPWVLLPVILAFGPVRGKGVPGLPNHSRGLRRLA 191 Query 173 AQAGLAVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMAL 232 AQ+ LAVALMG++NA+AT A CL A+IWW H+PNR W +TAWW L +AL TLWW++ L Sbjct 192 AQSALAVALMGSINAVATAAACLVAIIWWLSHKPNRTWLTFTAWWALFVALGTLWWIVPL 251 Query 233 TQLHGVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGT 292 L +SPPFLD+IES+GVTTQW+SL E+LRGTDSWTPFV+P AGA LVT AA++ T Sbjct 252 LLLGKISPPFLDYIESAGVTTQWASLAEILRGTDSWTPFVSPERIAGAVLVTQPAAVVAT 311 Query 293 CLVAAAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPL 352 LVAAAGLAGL +MPARGRL +L VG+ LA G+ G L+SPV+ V+ FLD+AG PL Sbjct 312 GLVAAAGLAGLCMRSMPARGRLTLILFVGITGLAAGYVGELSSPVSESVRLFLDSAGAPL 371 Query 353 RNVHKVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALM 412 RNVHK+ P++RLPLVLGLA LL++VPLPGS P W RAFAHPER+ VA+ + L AL Sbjct 372 RNVHKLEPLVRLPLVLGLAHLLAKVPLPGSVPLARWRRAFAHPEREPMVALTSLILVALT 431 Query 413 VSTSLAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTS 472 +ST+LAWTG++AP G + +P YW EAA WL + + R LVVPGAPF +QVWG + Sbjct 432 LSTALAWTGKLAPRGAYPDVPSYWNEAAQWLEDNTSPGSEAERALVVPGAPFGSQVWGLT 491 Query 473 HDEPLQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLV 532 DEPLQ L PW VRDS+PLTPP IRALDSVQRL A GRPS GLA TL QGI Y+++ Sbjct 492 RDEPLQALASTPWAVRDSVPLTPPGAIRALDSVQRLIADGRPSDGLAQTLLGQGIHYLVM 551 Query 533 RNDLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEI 592 RNDLD ETSRSARPIL+H+++ GSPG+ ++A FG P+ + G V DS LRP YPAIEI Sbjct 552 RNDLDGETSRSARPILVHQAVEGSPGIERVAHFGEDDSPEQIEGLVADSDLRPGYPAIEI 611 Query 593 YRVSAPANPGA---PYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAA 649 + V+ P A PY +Q+ RV GGPE +RL E + G GP+++ ADA AA Sbjct 612 FEVTPPDGTPAVSGPYSVDLNQVPRVQGGPESSVRLHESGLVPGT---GPMILAADAEAA 668 Query 650 GLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTG 709 GLPV V VTDTP RETD+G+VD+HSSA+R P DAR TYN VPDYPV V G W+G Sbjct 669 GLPVDSVTVTDTPRDRETDFGQVDNHSSALRTPDDARRTYNLVPDYPVANTPLVEGRWSG 728 Query 710 GRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNA 769 ITVSS+++DAT + +P+S+PA+ VDGDPAT W SN ++ A+GQWLQ+DFD P+++ Sbjct 729 ASITVSSAASDATQLGGTSPSSSPASTVDGDPATGWFSNGIERALGQWLQIDFDTPISSG 788 Query 770 VVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDG 829 ++ LT SA A+GA V+ + + T NGST ++ + G+P+T ++P G TPWVR TA T++G Sbjct 789 LLHLTTSAAAIGAPVKWLEVSTPNGSTAVKVERPGEPITVSIPGGNTPWVRITATHTENG 848 Query 830 SAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPG 889 S G QFGI++L++ + V +R ++P P G+++ W+L E GR CA Sbjct 849 SPGTQFGISELSVEDFSDRSAPKTVPIRFDTVLPSTPTGASVNAWNLSQEFPGRNACADS 908 Query 890 PDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASG 949 D VRC+ + PEEP+ RTLTVP V P + VR RQG L DL++ P ASG Sbjct 909 TDRVRCSNAFMAIPEEPSRFQRTLTVPENTVVAPTLTVRARQGNALEDLLSVPGRITASG 968 Query 950 DSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTP-PTLTLTLPRPTVVTGLRLAASRSM 1008 SD+ D GSA+AA DGD T W+APQ + P PTLTL LP PT+VTGL + Sbjct 969 SSDIGDTRGSAFAATDGDARTTWSAPQSTTEPGGPKPTLTLNLPEPTLVTGLDITRGLGT 1028 Query 1009 LPAHPTVVAINLGDGPQVRQL-----QVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNAL 1063 LP+ PT VA+NLG+GPQVR+L + + L P VTD + +S+ DW+ V+D+ AL Sbjct 1029 LPSLPTSVAVNLGNGPQVRELPEPSDDTPRTSRVTLSPFVTDKIVLSITDWEPVLDQTAL 1088 Query 1064 GFDQLKPPGLAEVVVLSAGGAPIAPA---DAARNRARALTVDCDHGPVVAVAGRFVHTSI 1120 GF Q +P GLAEV V+ A G PIA + A R +TV C GP ++VAG+ TSI Sbjct 1089 GFAQAQPTGLAEVGVVGADGTPIAGSGVQGAESFDNRTVTVTCGDGPTISVAGQQFPTSI 1148 Query 1121 RTTVGALLDGEPVAALPCEREPIA-LPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATV 1179 T L G PV A C + A LPAGQ E+++ PG AF VD L+ G + Sbjct 1149 TATATQLRTGAPVEARVCGLDASATLPAGQPEVVVEPGPAFSVDNLDLTAVGPSAAQRN- 1207 Query 1180 TSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVV 1239 T E+ AW HRE+ V S+ +++V PES + GW+A G+ LTP+ VNGWQQ W+V Sbjct 1208 TPLESTAWTANHRELTVTNSSADQLIVNPESTSIGWIATAPDGSELTPVVVNGWQQGWIV 1267 Query 1240 PAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAA 1299 PAG GT+T+ F + YR + GL LL L A T R P PWR A Sbjct 1268 PAGTAGTVTIDFPSDRWYRLGIFGGLVLLIPLLFAALVPTRREPKPLTPPRPWRSVAAGW 1327 Query 1300 AGVLAAGAVIASIAG--VMVMGTALGVRYALRRRERLRD-RVTVGLAAGGLILAGAALSR 1356 G+LAA VI G + V+ + LG+ ALR R R+ VG A ++ LS Sbjct 1328 VGMLAAATVIGGGVGAAIAVVCSILGL-AALRIFGPARTARILVGTAGVAAMIGITLLST 1386 Query 1357 HPWRSVDGYAGNWASVQLLALISVSV 1382 PWR+ GY G+ ++Q L+++ V Sbjct 1387 GPWRAPGGYVGDSFAIQFSMLVALVV 1412 >gi|312141425|ref|YP_004008761.1| integral membrane protein [Rhodococcus equi 103S] gi|311890764|emb|CBH50083.1| putative integral membrane protein [Rhodococcus equi 103S] Length=1414 Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 747/1396 (54%), Positives = 931/1396 (67%), Gaps = 36/1396 (2%) Query 17 LALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFFV 76 + L+ QSPG V DTK DLT NP+ FL RA + W+S P GQ QNQAYGY FPHG FF Sbjct 1 MVLSLLQSPGLVVADTKYDLTENPIGFLTRAAHQWSSIAPLGQVQNQAYGYFFPHGLFFA 60 Query 77 IGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTTL 136 G L VP W+TQR+WWA+L+ GFWG++RVAEALG+G SSR+V AVAFALSPRVLTT+ Sbjct 61 AGEFLHVPPWITQRVWWALLIVAGFWGVIRVAEALGIGSRSSRIVAAVAFALSPRVLTTI 120 Query 137 GSISSETLPMMLAPWVLLPTILA----LRGTSG----RSVRALAAQAGLAVALMGAVNAI 188 GSISSE+LPMMLAPWVLLP +LA +R + G + R LAAQ+ LAVALMGAVNA+ Sbjct 121 GSISSESLPMMLAPWVLLPVVLATSSPVRLSGGPSYQKGARVLAAQSALAVALMGAVNAV 180 Query 189 ATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIES 248 AT A CL A +WW HRPNR WW +TAWW+ ++ LATLWW++ L L VSPPFLD+IES Sbjct 181 ATAAACLVAGLWWIAHRPNRRWWVFTAWWIPSLLLATLWWIVPLLLLGRVSPPFLDYIES 240 Query 249 SGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAM 308 SGVTTQW+SL EVLRGTDSWTPFV+P AG LVT A++ T L+AAAGLAGL M Sbjct 241 SGVTTQWTSLTEVLRGTDSWTPFVSPERVAGTVLVTQPVAVVATGLIAAAGLAGLCMRRM 300 Query 309 PARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVL 368 PA+GRL +LLVG+ L G+ G L SP+A V+AFLD G PLRNVHK+ P++RLPLVL Sbjct 301 PAKGRLTLILLVGIAGLGAGYIGELGSPIADQVRAFLDGTGAPLRNVHKLEPLVRLPLVL 360 Query 369 GLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGT 428 GLA LL++VPLPGS P W AFAHPER+ VAV + L AL ++TSLAW+GR+AP G Sbjct 361 GLAHLLAKVPLPGSVPVRRWRSAFAHPEREPLVAVTTLILVALTLTTSLAWSGRLAPRGA 420 Query 429 FGALPQYWQEAADWLRTHHAATPTPG---RVLVVPGAPFATQVWGTSHDEPLQVLGDGPW 485 + +P YW EAA WL + A + + R LVVPGAPF QVWG + DEPLQ L PW Sbjct 421 YDEVPAYWHEAAQWLEDNAAGSGSGADAERALVVPGAPFGAQVWGLTRDEPLQALASTPW 480 Query 486 GVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSAR 545 VRD++PL PP IRALDSVQR+ + GRPSAGLADTL QGI YV+VRNDLDP+TSRS R Sbjct 481 AVRDAVPLVPPGAIRALDSVQRIISDGRPSAGLADTLLGQGIRYVVVRNDLDPDTSRSTR 540 Query 546 PILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAP--ANPGA 603 P+L+H+++ GSPGL K+AEFG + PD + V DS LRP YPA+EIYRV++P A P A Sbjct 541 PLLVHQTVDGSPGLEKVAEFGEEIVPDTVDDVVIDSDLRPGYPAVEIYRVTSPDGATPAA 600 Query 604 -PYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTP 662 PY D++ V GG E LLRL E + GP L+ +DA AG+ V VTDTP Sbjct 601 GPYAVDLDRVPVVQGGSESLLRLAENGTVT-----GPALLASDAARAGIDAASVTVTDTP 655 Query 663 VARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADAT 722 RETD+G+VD+HSSA+R P D R TYN VPDYPVPGA V G W+G ++VSS+++DAT Sbjct 656 TNRETDFGQVDNHSSALRGPDDERRTYNAVPDYPVPGAALVEGEWSGATLSVSSAASDAT 715 Query 723 AMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGA 782 + AP S PAA VDGDPATAW+SN L+ A GQWL++DFD P+T ++ LT S A G Sbjct 716 QLGGTAPGSGPAATVDGDPATAWLSNGLETARGQWLRLDFDTPITRGMLHLTTSPAAFGP 775 Query 783 QVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAI 842 V+ I +ET NGST++R DE GKP+ +LP G TPW+R A T+DGS G QFGI+++++ Sbjct 776 PVKWIRVETPNGSTSVRVDEPGKPVDVSLPSGMTPWLRILATHTEDGSPGYQFGISEISV 835 Query 843 TQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALA 902 Y ++G A PV + H ++P P G+ + GWDLG EL GR GCA GPD V C+ S+ L Sbjct 836 DDY-STGTALPVPIVHRTVLPATPAGAQVRGWDLGQELPGRAGCADGPDRVHCSGSLVLP 894 Query 903 PEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYA 962 PEEP +RTL+VP SVTP + +RPR G L L+ P+ A+G +D V++ G+A A Sbjct 895 PEEPGTFTRTLSVPESTSVTPQLTLRPRPGAALEGLVTDPAAVSATGAADGVEVRGTAAA 954 Query 963 AADGDPATAWTAPQRVVQHKTP-PTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLG 1021 A DGD AT+WTAP Q K PTLT+ LP+PT+VTGL+L S LPA P+ VA+NLG Sbjct 955 AVDGDVATSWTAPTDSAQRKGGLPTLTIRLPQPTLVTGLQLTPSPGSLPAAPSRVAVNLG 1014 Query 1022 DGPQVRQLQV--GELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL 1079 +GPQ R L T+ L P VTDT+ +SL+ WDDV+DR ALGF Q +P GL+EV VL Sbjct 1015 NGPQTRDLDTEGAAPQTVPLDPHVTDTIVLSLVQWDDVLDRTALGFLQRQPAGLSEVAVL 1074 Query 1080 SAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCE 1139 GG P+ P A R +TV CD GP ++V G V TS+ T L G+PV A C+ Sbjct 1075 GDGGRPV-PGTATATTDRTVTVGCDIGPTISVGGTVVRTSVTATARQLASGQPVTATVCD 1133 Query 1140 REPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPES 1199 P+ LP G+Q+++++PG AF VD +L ++A V+S G W RE+ V S Sbjct 1134 PAPVPLPTGRQDVVVAPGPAFTVDNLRLDA-APAPAAAPVSSPAVGRWTENLRELDVAAS 1192 Query 1200 ATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRA 1259 ++LVVPES N GWVA G L P+ V GWQQ W+VPAG G +TLTF + YRA Sbjct 1193 GADQLLVVPESTNIGWVATAPDGTELQPVVVGGWQQGWIVPAGTDGVVTLTFPSDRWYRA 1252 Query 1260 SLAIGLALLPLLALLAFW-----RTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAG 1314 +A GL LL LALLA R + + P PW AA GV A V+A G Sbjct 1253 GIAFGLLLLIPLALLALVPRRRDREPEPEGSATPPRPWHSVVAAALGVTAVATVVAGPVG 1312 Query 1315 ----VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWA 1370 ++V TA G+ A R + R VG A L++A LS PWR+ DGY G+ Sbjct 1313 TGVTLLVAATAFGL--ARWRGDAFAARFLVGTAGVSLVIASVLLSTGPWRAADGYVGHSF 1370 Query 1371 SVQLLALISVSVVAAS 1386 +QL ALI V V S Sbjct 1371 LIQLFALIGVVCVGVS 1386 >gi|226364652|ref|YP_002782434.1| hypothetical protein ROP_52420 [Rhodococcus opacus B4] gi|226243141|dbj|BAH53489.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=1434 Score = 1303 bits (3371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 734/1410 (53%), Positives = 921/1410 (66%), Gaps = 41/1410 (2%) Query 3 PLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQN 62 PLSR+WL VA L F Q+PG+++ DTK DL+ NP+ FL RA++ W+S P GQ QN Sbjct 7 PLSRRWLFGASVVAFLLAFLQTPGRLAADTKYDLSQNPIGFLERASHQWSSQAPMGQVQN 66 Query 63 QAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVG 122 QAYGY FPHG FF G +L VP W+TQR+WWA+LL GFWG++R+AEALG G SSRV+ Sbjct 67 QAYGYFFPHGAFFAFGDILSVPAWITQRVWWALLLVAGFWGIVRLAEALGAGSRSSRVIA 126 Query 123 AVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRA--------LAAQ 174 VAFA SPRVLTTLGSISSETLPMMLAPWVLLP +LAL SG++ R LAAQ Sbjct 127 GVAFAFSPRVLTTLGSISSETLPMMLAPWVLLPVVLALSHVSGKASRDTHWHSPARLAAQ 186 Query 175 AGLAVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQ 234 + LAVALMGAVNA+AT A CL A +WW HRPNR WW +TAWW +ALATLWW++ L Sbjct 187 SALAVALMGAVNAVATAAACLVAGLWWISHRPNRRWWTFTAWWFPFLALATLWWIVPLLL 246 Query 235 LHGVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCL 294 L VSPPFLD+IESSGVTTQW+SL E+LRGTDSWTPFV+P AGA LVT AA+ T L Sbjct 247 LGKVSPPFLDYIESSGVTTQWTSLAEILRGTDSWTPFVSPERIAGAVLVTQPAAVAATGL 306 Query 295 VAAAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRN 354 +AAAGLAGL +MPARGRL +L VGV LA G+ G L SP A V+ FLD+ G PLRN Sbjct 307 IAAAGLAGLCMRSMPARGRLTLILFVGVAGLAAGYIGELGSPFAEQVRLFLDSTGAPLRN 366 Query 355 VHKVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVS 414 VHK+ P++RLPLVLGLA LL++VPLPGS P W A AHPER+ VAV + L AL ++ Sbjct 367 VHKLEPLVRLPLVLGLAHLLAQVPLPGSVPFARWRSALAHPEREPMVAVTSLVLVALTLA 426 Query 415 TSLAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPG----RVLVVPGAPFATQVWG 470 TSLAWTG++AP GT+ +P YWQ+AA WL + T G R LVVPGAPF +Q+WG Sbjct 427 TSLAWTGKLAPRGTYTDVPDYWQQAASWLEDNAGGTSPDGSDAERALVVPGAPFGSQLWG 486 Query 471 TSHDEPLQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYV 530 + DEP+Q L PW RD++PLTPP TIRA+DS+QRL GRPS G+A TL QGI Y+ Sbjct 487 LTRDEPMQALASTPWASRDAVPLTPPGTIRAMDSIQRLITDGRPSDGMAQTLLGQGIHYL 546 Query 531 LVRNDLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAI 590 ++RNDLDPETSRS RP+L H+++ GSPG ++AEFG +GP + G V DS LRPRYPAI Sbjct 547 VLRNDLDPETSRSTRPLLAHQAVTGSPGFTRVAEFGEDIGPGDVEGLVIDSDLRPRYPAI 606 Query 591 EIYRVSAPANPGA---PYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADAR 647 EI+ VS P A PY A D + RV GGPE L RL E L G GPVL+ ADA Sbjct 607 EIFAVSTPDGSPATSGPYTANLDDIPRVQGGPESLQRLRENGALPGT---GPVLLAADAT 663 Query 648 AAGLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGW 707 AGLPV V VTDTP RETDYG+VD+HSSA+R P DAR T+N VPDYPV V G W Sbjct 664 RAGLPVDDVTVTDTPRDRETDYGQVDNHSSALRTPDDARRTFNLVPDYPVADTPLVEGRW 723 Query 708 TGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVT 767 G ++VSS++ADAT + +PAS+ AA VDGDPAT W SN ++ A+GQWL++DFD P+T Sbjct 724 EGATLSVSSAAADATQLGGTSPASSAAATVDGDPATGWFSNGIERALGQWLEIDFDTPLT 783 Query 768 NAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATD 827 ++++ +T S A+GA VR + + T NGST ++ D GKP+ ++P G TPWVR TA T+ Sbjct 784 SSLLHITTSPAAIGAPVRWMEVSTPNGSTAVKVDAPGKPIAVSVPGGVTPWVRITATRTE 843 Query 828 DGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCA 887 +GS G QFGI+++++ + V +R ++P P G++++GWDL L GR CA Sbjct 844 NGSPGTQFGISEVSVEDFSQRDAPVTVPIRFRTVLPPTPEGASVSGWDLSQALPGRNACA 903 Query 888 PGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRA 947 PD VRC+ + L PEE RTL+VP P +VTP + +R RQG L D++ A Sbjct 904 EAPDRVRCSNAFVLPPEEVGTFERTLSVPEPTAVTPRLTLRARQGAPLEDVLTQRDRPSA 963 Query 948 SGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHK-TPPTLTLTLPRPTVVTGLRLAASR 1006 G S++ D+ GSA+AA D DP T+W+A Q K PTLT+ LP PT+VTGL+L S Sbjct 964 HGTSNITDLRGSAFAATDNDPRTSWSAKQDTTSGKGAKPTLTIDLPEPTLVTGLQLTPSL 1023 Query 1007 SMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFD 1066 LPA P VA++LG+GPQVR + + T+ + PRVTD + +SL+ W +D+NALGF Sbjct 1024 GALPAAPDRVAVDLGNGPQVRDVDEDD-GTVTVEPRVTDRIVLSLVSWKSTLDQNALGFA 1082 Query 1067 QLKPPGLAEVVVLSAGGAPI---APADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTT 1123 QL+P GLAEV VL GA + P D A + R +TV C GPVV + G+ V TS+ T Sbjct 1083 QLQPAGLAEVGVLGEDGALLPGSGPVDNAGD--RPVTVPCAEGPVVTIGGQPVRTSVTAT 1140 Query 1124 VGALLDGEPVAALPCERE-PIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSA 1182 G LL G+PV A C+ P+ L AG Q++ + PG AF VD +L G + Sbjct 1141 AGQLLSGDPVPATLCDSPGPVPLDAGSQDVTVDPGPAFFVDSLRLDA-GPQARAVPTEQV 1199 Query 1183 ETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAG 1242 T AW HRE+ V S R++VVPES N GWVA G+ LTP+ V+GWQQ W++PAG Sbjct 1200 STTAWTENHRELTVARSDAERLVVVPESTNVGWVATAPDGSELTPVVVDGWQQGWILPAG 1259 Query 1243 NPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAA-- 1300 GT+TL F + YR + GL LL L A W RR P P P W +A Sbjct 1260 TEGTVTLDFPTDHWYRLGIFGGLLLLIPLLAAALWP--RRARERDPGP--APRTWGSATV 1315 Query 1301 ---GVLAAGAVIASIAG--VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALS 1355 G+LAA VI G V+ T L V R RV VG+A +L A LS Sbjct 1316 GWLGILAAATVIGGPVGAATTVVATLLAVVLIRLRGTATTARVLVGVAGASTMLGMAILS 1375 Query 1356 RHPWRSVDGYAGNWASVQ---LLALISVSV 1382 PWR+ GY G+ VQ LLAL++ + Sbjct 1376 TGPWRAPGGYVGHSFLVQFPLLLALVATGL 1405 >gi|325673154|ref|ZP_08152847.1| transmembrane protein [Rhodococcus equi ATCC 33707] gi|325555989|gb|EGD25658.1| transmembrane protein [Rhodococcus equi ATCC 33707] Length=1414 Score = 1301 bits (3366), Expect = 0.0, Method: Compositional matrix adjust. Identities = 746/1396 (54%), Positives = 930/1396 (67%), Gaps = 36/1396 (2%) Query 17 LALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFFV 76 + L+ QSPG V DTK DLT NP+ FL RA + W+S P GQ QNQAYGY FPHG FF Sbjct 1 MVLSLLQSPGLVVADTKYDLTENPIGFLTRAAHQWSSIAPLGQVQNQAYGYFFPHGLFFA 60 Query 77 IGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTTL 136 G L VP W+TQR+WWA+L+ GFWG++RVAEALG+G SSR+V AVAFALSPRVLTT+ Sbjct 61 AGEFLHVPPWITQRVWWALLIVAGFWGVIRVAEALGIGSRSSRIVAAVAFALSPRVLTTI 120 Query 137 GSISSETLPMMLAPWVLLPTILA----LRGTSG----RSVRALAAQAGLAVALMGAVNAI 188 GSISSE+LPMMLAPWVLLP +LA +R + G + R LAAQ+ LAVALMGAVNA+ Sbjct 121 GSISSESLPMMLAPWVLLPVVLATSSPVRLSGGPSYQKGARVLAAQSALAVALMGAVNAV 180 Query 189 ATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIES 248 AT A CL A +WW HRPNR WW +TAWW+ ++ LATLWW++ L L VSPPFLD+IES Sbjct 181 ATAAACLVAGLWWIAHRPNRRWWVFTAWWIPSLLLATLWWIVPLLLLGRVSPPFLDYIES 240 Query 249 SGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAM 308 SGVTTQW+SL EVLRGTDSWTPFV+P AG LVT A++ T L+AAAGLAGL M Sbjct 241 SGVTTQWTSLTEVLRGTDSWTPFVSPERVAGTVLVTQPVAVVATGLIAAAGLAGLCMRRM 300 Query 309 PARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVL 368 PA+GRL +LLVG+ L G+ G L SP+A V+AFLD G PLRNVHK+ P++RLPLVL Sbjct 301 PAKGRLTLILLVGIAGLGAGYIGELGSPIADQVRAFLDGTGAPLRNVHKLEPLVRLPLVL 360 Query 369 GLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGT 428 GLA LL++VPLPGS P W AFAHPER+ VAV + L AL ++TSLAW+GR+AP G Sbjct 361 GLAHLLAKVPLPGSVPVRRWRSAFAHPEREPLVAVTTLILVALTLTTSLAWSGRLAPRGA 420 Query 429 FGALPQYWQEAADWLRTHHAATPTPG---RVLVVPGAPFATQVWGTSHDEPLQVLGDGPW 485 + +P YW EAA WL + A + + R LVVPGAPF QVWG + DEPLQ L PW Sbjct 421 YDEVPVYWHEAAQWLEDNAAGSGSGADAERALVVPGAPFGAQVWGLTRDEPLQALASTPW 480 Query 486 GVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSAR 545 VRD++PL PP IRALDSVQR+ + GRPSAGLADTL QGI YV+VRNDLDP+TSRS R Sbjct 481 AVRDAVPLVPPGAIRALDSVQRIISDGRPSAGLADTLLGQGIRYVVVRNDLDPDTSRSTR 540 Query 546 PILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAP--ANPGA 603 P+L+H+++ GSPGL K+AEFG + PD + V DS LRP YPA+EIYRV++P A P A Sbjct 541 PLLVHQTVDGSPGLQKVAEFGEEIVPDTVDDVVIDSDLRPGYPAVEIYRVTSPDGATPAA 600 Query 604 -PYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTP 662 PY D++ V GG E LLRL E + GP L+ +DA AG+ V VTDTP Sbjct 601 GPYAVDLDRVPVVQGGSESLLRLAENGTVT-----GPALLASDAARAGIDAVSVTVTDTP 655 Query 663 VARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADAT 722 RETD+G+VD+HSSA+R P D R TYN VPDYPVPGA V G W+G ++VSS+++DAT Sbjct 656 TNRETDFGQVDNHSSALRGPDDERRTYNAVPDYPVPGAALVEGEWSGATLSVSSAASDAT 715 Query 723 AMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGA 782 + AP S PAA VDGDPATAW+SN L+ A GQWL++DFD P+T ++ LT S A G Sbjct 716 QLGGTAPGSGPAATVDGDPATAWLSNGLETARGQWLRLDFDTPITRGMLHLTTSPAAFGP 775 Query 783 QVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAI 842 V+ I +ET NGST++R DE GKP+ +LP G TPW+R A T+DGS G QFGI+++++ Sbjct 776 PVKWIRVETPNGSTSVRVDEPGKPVDVSLPSGTTPWLRILATHTEDGSPGYQFGISEISV 835 Query 843 TQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALA 902 Y ++G A PV + H ++P P G+ + GWDLG EL GR GCA GPD V C+ S+ L Sbjct 836 DDY-STGTALPVPIVHRTVLPATPAGAQVRGWDLGQELPGRAGCADGPDRVHCSGSLVLP 894 Query 903 PEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYA 962 PEEP +R L+VP SVTP + +RPR G L L+ P+ A+G +D V++ G+A A Sbjct 895 PEEPGTFTRALSVPESTSVTPQLTLRPRPGAALEGLVTDPAAVSATGAADGVELRGTAAA 954 Query 963 AADGDPATAWTAPQRVVQHKTP-PTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLG 1021 A DGD AT+WTAP Q K PTLT+ LP+PT+VTGL+L S LPA P+ VA+NLG Sbjct 955 AVDGDVATSWTAPTDSAQRKGGLPTLTIRLPQPTLVTGLQLTPSPGSLPAAPSRVAVNLG 1014 Query 1022 DGPQVRQLQV--GELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL 1079 +GPQ R L T+ L P VTDT+ +SL+ WDDV+DR ALGF Q +P GL+EV VL Sbjct 1015 NGPQTRGLDTEGAAPQTVPLDPHVTDTIVLSLVQWDDVLDRTALGFLQRQPAGLSEVAVL 1074 Query 1080 SAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCE 1139 GG P+ P A R +TV CD GP ++V G V TS+ T L G+PV A C+ Sbjct 1075 GDGGRPV-PGTATATTDRTVTVGCDIGPTISVGGTVVRTSVTATARQLASGQPVTANVCD 1133 Query 1140 REPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPES 1199 P+ LP G+Q+++++PG AF VD +L ++A V+S G W RE+ V S Sbjct 1134 PAPVPLPTGRQDVVVAPGPAFTVDNLRLDA-APAPAAAPVSSPAVGRWTENLRELDVAAS 1192 Query 1200 ATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRA 1259 ++LVVPES N GWVA G L P+ V GWQQ W+VPAG G +TLTF + YRA Sbjct 1193 GADQLLVVPESTNIGWVATAPDGTELQPVVVGGWQQGWIVPAGTDGVVTLTFPSDRWYRA 1252 Query 1260 SLAIGLALLPLLALLAFWRTGRRQLAD-----RPTPPWRPGAWAAAGVLAAGAVIASIAG 1314 +A GL LL LALLA R + + P PW AA GV A V+A G Sbjct 1253 GIAFGLLLLIPLALLALVPRRRNREPEPEGSAAPPRPWHSVVAAALGVTAVATVVAGPVG 1312 Query 1315 ----VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWA 1370 ++V TA G+ A R + R VG A L++A LS PWR+ DGY G+ Sbjct 1313 TGVTLLVAATAFGL--ARWRGDAFAARFLVGTAGVSLVIASVLLSTGPWRAADGYVGHSF 1370 Query 1371 SVQLLALISVSVVAAS 1386 +QL ALI V V S Sbjct 1371 LIQLFALIGVVCVGVS 1386 >gi|111022159|ref|YP_705131.1| hypothetical protein RHA1_ro05192 [Rhodococcus jostii RHA1] gi|110821689|gb|ABG96973.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=1436 Score = 1297 bits (3356), Expect = 0.0, Method: Compositional matrix adjust. Identities = 733/1406 (53%), Positives = 923/1406 (66%), Gaps = 34/1406 (2%) Query 3 PLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQN 62 PLSR+WL VA L F Q+PG+++ DTK DL+ NP+ FL RA + W+S P GQ QN Sbjct 10 PLSRRWLFGASVVAFLLAFLQTPGRLAADTKYDLSQNPIGFLERAAHQWSSQAPMGQVQN 69 Query 63 QAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVG 122 QAYGY FPHG FF +G +L VP W+TQR+WWA+LL GFWG++R+AEALGVG SSR++ Sbjct 70 QAYGYFFPHGAFFALGDVLSVPPWITQRIWWALLLVAGFWGIVRLAEALGVGSRSSRIIA 129 Query 123 AVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRA--------LAAQ 174 VAFA SPRVLTTLGSISSETLPMMLAPWVLLP + AL S ++ R LAAQ Sbjct 130 GVAFAFSPRVLTTLGSISSETLPMMLAPWVLLPVVGALSQVSDKASRNTRWHSSARLAAQ 189 Query 175 AGLAVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQ 234 + LAVALMGAVNA+AT+A CL A +WW HRPNR WW +TAWW +ALATLWW++ L Sbjct 190 SALAVALMGAVNAVATVAACLVAGLWWIAHRPNRRWWVFTAWWFPFLALATLWWIVPLLL 249 Query 235 LHGVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCL 294 L VSPPFLD+IESSGVTTQW+SL E+LRGTDSWTPFV+P AGA LVT AA+ T L Sbjct 250 LGKVSPPFLDYIESSGVTTQWTSLAEILRGTDSWTPFVSPERIAGAVLVTQPAAVAATGL 309 Query 295 VAAAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRN 354 +AAAGLAGL +MPARGRL +L VGV LA G+ G L SP A V+ FLD+ G PLRN Sbjct 310 IAAAGLAGLCMRSMPARGRLTLILFVGVAGLAAGYIGELGSPFAEQVRLFLDSTGAPLRN 369 Query 355 VHKVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVS 414 VHK+ P++RLPLVLGLA LL++VPLPGS P W AFAHPER+ VAV + L AL ++ Sbjct 370 VHKLEPLVRLPLVLGLAHLLAKVPLPGSVPVARWRSAFAHPEREPMVAVTSLVLVALTLA 429 Query 415 TSLAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPG----RVLVVPGAPFATQVWG 470 TSLAWTG++AP GT+ +P YWQ+AA WL + T G R LVVPGAPF +Q+WG Sbjct 430 TSLAWTGKLAPRGTYSEVPDYWQQAASWLEDNAGGTSPDGSDAERALVVPGAPFGSQLWG 489 Query 471 TSHDEPLQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYV 530 + DEP+Q L PW RD++PLTPP TIRA+DS+QRL GRPS G+A TL QGI Y+ Sbjct 490 LTRDEPMQALASTPWASRDAVPLTPPGTIRAMDSIQRLITDGRPSDGMAQTLLGQGIHYL 549 Query 531 LVRNDLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAI 590 ++RNDLDPETSRS RP+L H+++ GSPG ++AEFG +GP + G V DS LRPRYPAI Sbjct 550 VLRNDLDPETSRSTRPLLAHQAVTGSPGFTQVAEFGEDIGPGDVEGLVIDSDLRPRYPAI 609 Query 591 EIYRVSAPA---NPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADAR 647 EI+ VS P PY A D + RV GGPE L RL E L G GPVL+ ADA Sbjct 610 EIFEVSMPDGSPTTSGPYTANLDGIPRVQGGPESLQRLRENGALPGA---GPVLLAADAT 666 Query 648 AAGLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGW 707 AGLPV V VTDTP RETDYG+VD+HSSA+R P DAR T+N VPDYPV V G W Sbjct 667 RAGLPVDDVTVTDTPRNRETDYGQVDNHSSALRTPDDARRTFNLVPDYPVADTPLVEGQW 726 Query 708 TGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVT 767 G ++VSS+++DAT + +PAS+ AA VDGDPAT W SN ++ A+GQWLQ+DFD P+T Sbjct 727 EGATLSVSSAASDATQLGGSSPASSAAATVDGDPATGWFSNGIERALGQWLQIDFDTPLT 786 Query 768 NAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATD 827 ++++ +T S A+GA VR + + T NGST ++ D GKP+ ++P G TPWVR TA T+ Sbjct 787 SSLLHITTSPAAIGAPVRWMEVSTPNGSTAVKVDAPGKPIAVSVPGGVTPWVRITATRTE 846 Query 828 DGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCA 887 +GSAG QFGI+++++ + V +R+ ++P P G++++GWDL EL GR CA Sbjct 847 NGSAGTQFGISEVSVEDFSQRDAPVTVPIRYRTVLPPTPEGASVSGWDLSQELPGRNSCA 906 Query 888 PGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRA 947 PD VRC+ + L PEE RTL+VP P +VTP + +R R G L +L+ + A Sbjct 907 ESPDRVRCSNAFVLPPEEVGTFERTLSVPEPTAVTPQLMLRARHGAPLEELLTQKDSPSA 966 Query 948 SGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHK-TPPTLTLTLPRPTVVTGLRLAASR 1006 G S++ D+ GSA+AA D DP T+W+A Q K PTLT+ LP PT+VTGL+L S Sbjct 967 HGTSNITDLRGSAFAATDNDPRTSWSAKQDTTTGKGAKPTLTIDLPEPTLVTGLQLTPSA 1026 Query 1007 SMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFD 1066 +PA P VA++LG+GPQVR V + T+ + PRVTD + +SL+ W +D+NALGF Sbjct 1027 GAVPAAPDRVAVDLGNGPQVR--DVDDDGTVRVEPRVTDRIVLSLVSWKSTLDQNALGFA 1084 Query 1067 QLKPPGLAEVVVLSAGGAPI---APADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTT 1123 QL+P GLAEV VL G + PAD A AR +TV C+ GPVV + G+ V TS+ T Sbjct 1085 QLQPAGLAEVGVLGEDGVLLPGSGPADDA--GARPVTVPCEEGPVVTIGGQPVRTSVTAT 1142 Query 1124 VGALLDGEPVAALPCERE-PIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSA 1182 VG +L G PV A C+ P+ L AG Q++ + PG+AF VD +L G + Sbjct 1143 VGQVLSGGPVPATVCDTPGPVPLGAGSQDVTVDPGSAFFVDSLRLDA-GPQAQAVPTEQV 1201 Query 1183 ETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAG 1242 T AW HRE+ VP S RV+VVPES N GWVA G+ LTPI V+GWQQ W++PAG Sbjct 1202 STTAWTENHRELTVPRSDAERVVVVPESTNVGWVATAPDGSELTPIVVDGWQQGWILPAG 1261 Query 1243 NPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRPTP-PWRPGAWAAAG 1301 GT+TL F + YR + GL LL L A R+ P P W G Sbjct 1262 TEGTVTLDFPTDHWYRLGIFGGLLLLIPLIAAAVRPRRARERDPGPAPRTWGSATVGWLG 1321 Query 1302 VLAAGAVIASIAG--VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPW 1359 +LAA VI G V+ T L V R RV VG+A +L A LS PW Sbjct 1322 ILAAATVIGGPVGAATTVVVTLLAVTLVRLRGAATTARVLVGVAGASTMLGMAMLSTGPW 1381 Query 1360 RSVDGYAGNWASVQ---LLALISVSV 1382 R+ GY G+ VQ LLAL++ + Sbjct 1382 RAPGGYVGHSFLVQFPLLLALVATGL 1407 >gi|54027444|ref|YP_121686.1| hypothetical protein nfa54700 [Nocardia farcinica IFM 10152] gi|54018952|dbj|BAD60322.1| putative membrane protein [Nocardia farcinica IFM 10152] Length=1377 Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 739/1405 (53%), Positives = 905/1405 (65%), Gaps = 78/1405 (5%) Query 16 ALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFF 75 A LTF Q+PG DTK DL NPL FL RA +LW+S P GQ QNQAYGY FPHG FF Sbjct 4 AFLLTFLQAPGLTVADTKYDLAQNPLGFLDRAAHLWSSQAPMGQVQNQAYGYFFPHGAFF 63 Query 76 VIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTT 135 G LLG+P WVTQR+WWA+LL GFWG++R+ E LG+G SR+V AVAF LSPRVLTT Sbjct 64 SAGDLLGLPAWVTQRIWWALLLLAGFWGIVRLCETLGIGTRGSRIVAAVAFTLSPRVLTT 123 Query 136 LGSISSETLPMMLAPWVLL-PTILALRGTSGRSVRALA-AQAGLAVALMGAVNAIATLAG 193 LGSISSETLPM+LAPWVL+ P L R A + A + LA+ALMGAVNA+AT+A Sbjct 124 LGSISSETLPMVLAPWVLIAPAALGNAYRRRRRGGAESPAGSALALALMGAVNAVATVAA 183 Query 194 CLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSGVTT 253 LPA++WWA +RPNR WWR+TA W+ + LATLWWV+ L L VSPPFLD+IESSGVTT Sbjct 184 FLPALLWWASYRPNRRWWRFTAAWVPLLVLATLWWVVPLLLLGRVSPPFLDYIESSGVTT 243 Query 254 QWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPARGR 313 QW+SL EVLRGTDSWTPFV+P AGA LVT AA+L T L+AAAG+AGL +MP RGR Sbjct 244 QWASLAEVLRGTDSWTPFVSPERIAGAVLVTQPAAVLATGLIAAAGMAGLAMRSMPHRGR 303 Query 314 LVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGLAQL 373 L +LLVG+V + G G L+ P A V+ FLD+ G PLRNVHK+ P+IR+PLVLGLA L Sbjct 304 LSLILLVGLVGICAGFVGELSGPFAESVRVFLDSTGAPLRNVHKLEPLIRIPLVLGLAHL 363 Query 374 LSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFGALP 433 L+RVPLP SAP P AFAHPERDK VAVA + LTAL +STSLAWTG++AP G + +P Sbjct 364 LTRVPLPASAPMPRVFGAFAHPERDKLVAVAALVLTALALSTSLAWTGKLAPRGAYDEVP 423 Query 434 QYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDSIPL 493 YW E ADWL H A T R LVVPGAPF +QVWG + DEPLQ L PW VRD++PL Sbjct 424 AYWHETADWLAAHAADT----RALVVPGAPFGSQVWGLTRDEPLQALARTPWAVRDAVPL 479 Query 494 TPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLHRSI 553 PP TIRA+DSVQRL A GRPSAGLA TLA QGI +++RNDLDPETSRS RP+L H++I Sbjct 480 NPPGTIRAMDSVQRLIADGRPSAGLAATLAGQGIGVLVLRNDLDPETSRSTRPLLAHQAI 539 Query 554 AGSPGLAKLAEFGAPVGPDPLA-GFVNDSGLRPRYPAIEIYRVSAPANP----------- 601 GSPGL K+AEFGAPV +A V D LRP YPA+EIYRV AP +P Sbjct 540 EGSPGLTKVAEFGAPVENLAVAEDLVVDGDLRPTYPAVEIYRVQAPRSPALAPAEVRAGT 599 Query 602 GAP------YFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQ 655 GAP Y D + V GGPEVL ER R G P L+ ADA AG+PV Sbjct 600 GAPETFPGAYTVPLDAVPVVQGGPEVL----ERLRRDGSPAGP-ALLAADAARAGIPVGP 654 Query 656 VAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVS 715 V VTDTP+ RE D+GRVD+H+SA+RAP DAR T+N VPDYPVPGAEPV G W+G +T S Sbjct 655 VTVTDTPMDREADFGRVDNHNSALRAPDDARRTHNLVPDYPVPGAEPVRGAWSGATVTAS 714 Query 716 SSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTP 775 SS+ADAT + AP S+ AAAVDGDPATAW+SN + A+GQWL++D D+PVTN ++ LT Sbjct 715 SSAADATQLGGAAPGSSTAAAVDGDPATAWISNGTEIAIGQWLRLDLDKPVTNGLLRLTT 774 Query 776 SATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQF 835 SA A+G V+ + + T NGS + R E G P++ +LP G T W+ TA T+ G+ G QF Sbjct 775 SAAAIGDPVKWVEVRTANGSVSARITEPGAPVSLSLPAGRTEWLTITAIRTEGGTGGGQF 834 Query 836 GITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRC 895 GI++L++ Y PVQ+RH ++P P G + GWDLG E GR GC PD VRC Sbjct 835 GISELSLDDYSVRDAPVPVQIRHHTVLPPTPAGGTVLGWDLGQEFPGRNGCFDAPDRVRC 894 Query 896 AASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVD 955 + +AL+PEEP R L VP P++VTP + VR RQGP L L+ P A G +D+ D Sbjct 895 SKGLALSPEEPGAFDRMLAVPEPMTVTPELTVRTRQGPALEALLTEPGRPVARGQADVGD 954 Query 956 ILGSAYAAADGDPATAWTAPQRVVQHKT--PPTLTLTLPRPTVVTGLRLAASRSMLPAHP 1013 + GSA+AA DGDP T WTAP+ V+ T PTLT+ LP P +VTGL + S LPA P Sbjct 955 LRGSAFAATDGDPRTTWTAPEDTVREATGPKPTLTIELPEPALVTGLDITTSLGGLPAQP 1014 Query 1014 TVVAINLGDGPQVRQL----QVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLK 1069 T V++NLG+GPQVR L + G + LHP VTD + +S+ W V+DR ALGF Q + Sbjct 1015 TAVSVNLGNGPQVRTLDEDREPGVPARVDLHPTVTDRIELSIQSWRPVLDRTALGFAQTQ 1074 Query 1070 PPGLAEVVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLD 1129 PPGLAE+ VL P D R +TV C+ GP VA+ GR + T++ TV L Sbjct 1075 PPGLAEIEVLGPDHPPAEGPD------RVVTVPCESGPTVALGGRVLRTTVTATVAELRS 1128 Query 1130 GEPVAALPCEREPI--------ALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTS 1181 G PVAA PC + +PAG E+ ++PG F VD +L T T Sbjct 1129 GAPVAARPCAEADVFGEVSTSLPVPAGTAEVTVAPGELFSVDRLRL----------TRTE 1178 Query 1182 AETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPA 1241 P +R+LV+P S N GW ART+ G L P+ V+GWQQ W++PA Sbjct 1179 PLPARENPDR----------TRLLVLPLSTNVGWEARTADGRALEPVVVDGWQQGWLMPA 1228 Query 1242 GNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADR-PTP-PWRPGAWAA 1299 G +T++F + YR + GL LL LA LA R RR A+ P P PW A AA Sbjct 1229 DATGPVTVSFPVDRWYRWGIFGGLVLLIPLAALAIPR--RRAAAEHDPAPRPWSGRAVAA 1286 Query 1300 AGVLAAGAVIASIAG-VMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHP 1358 + AA VIA + G + + L R+A R R +A G ++ AALS P Sbjct 1287 VALTAAAGVIAGVTGAALTVAGLLAARFAGAR----RIPAPAAIAGIGTAVSAAALSTGP 1342 Query 1359 WRSVDGYAGNWASVQLLALISVSVV 1383 WRS DGY G VQL ALI+V V Sbjct 1343 WRSPDGYMGGSLWVQLPALIAVIAV 1367 >gi|343924455|ref|ZP_08764004.1| hypothetical protein GOALK_016_00530 [Gordonia alkanivorans NBRC 16433] gi|343765599|dbj|GAA10930.1| hypothetical protein GOALK_016_00530 [Gordonia alkanivorans NBRC 16433] Length=1423 Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 684/1398 (49%), Positives = 877/1398 (63%), Gaps = 55/1398 (3%) Query 14 AVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGT 73 A+AL + QS GQ++ DTKLDLTANPL FLARA +LW + P GQ QNQAYGY FPHG Sbjct 4 AIALIVCLLQSTGQIAADTKLDLTANPLGFLARAAHLWTPNAPMGQVQNQAYGYFFPHGA 63 Query 74 FFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVL 133 FF +G LL VP W+ QRLWWA+LLTVGF G++RVAEAL +G P+SR+ V F LSPRVL Sbjct 64 FFALGDLLSVPPWIVQRLWWALLLTVGFVGIVRVAEALRLGSPASRIFAGVVFVLSPRVL 123 Query 134 TTLGSISSETLPMMLAPWVLLPTILALRGTS--GRSVRALAAQAGLAVALMGAVNAIATL 191 TTLGSISSETLPMMLAPWVLLP I AL ++ GR + AA++ AVALMGAVNA+AT Sbjct 124 TTLGSISSETLPMMLAPWVLLPVIRALDASASDGRPLWREAARSAAAVALMGAVNAVATA 183 Query 192 AGCLPAVIWWACHRP-NRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSG 250 A A +WW HRP +R WWR+ AW L + LA WW++ L L VSPPFLD+IES+ Sbjct 184 AALGVAAMWWLLHRPRDRRWWRFGAWTALGLFLACAWWIVPLLILSRVSPPFLDYIESAR 243 Query 251 VTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPA 310 VTTQW+SL EV+RG SWTPFV+ AGA LVT AA+L T +AAAGLAGL MP Sbjct 244 VTTQWTSLTEVMRGASSWTPFVSTERVAGAVLVTQPAAVLATGTIAAAGLAGLCMRHMPF 303 Query 311 RGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGL 370 RGRLV +L VG+V++ VG GGL SP+A ++ FLD +G PLRN+HK P IR+PLVLG+ Sbjct 304 RGRLVAILGVGLVVMCVGFAGGLGSPIAEQIRVFLDGSGAPLRNIHKFEPFIRIPLVLGV 363 Query 371 AQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFG 430 A LL+RVPLPG+ L AFAHP+R + VA A+V L A++ + SL WTG++AP GT+ Sbjct 364 AHLLARVPLPGTVSVRETLSAFAHPQRSRPVAAAIVLLVAVIGAGSLIWTGQLAPAGTYT 423 Query 431 ALPQYWQEAADWLRTHHAATPT---PGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGV 487 A+P +W++ ADWL + H+A P P R LVVPGAPFA Q+WG + DEPLQ L D PW V Sbjct 424 AIPNHWKQTADWL-SEHSARPDDSPPARALVVPGAPFADQLWGLTRDEPLQPLADAPWAV 482 Query 488 RDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPI 547 RD+IPLTPP IRALDSVQR AAGR S GLA+TLA+QG+ +V++R DLDPETSRSARP+ Sbjct 483 RDAIPLTPPGAIRALDSVQREIAAGRGSPGLAETLAQQGVGFVVLRADLDPETSRSARPL 542 Query 548 LLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPG-APYF 606 L +++ SPGL ++A+FG VGP + G + D+GLRP PA++IY V A G P Sbjct 543 LAQQALDTSPGLTRVAQFGPQVGPPSVRGVMRDNGLRPTMPAVQIYAVEATGFDGTGPLL 602 Query 607 AATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARE 666 + RV GGPE + L E R QG PPLGPVL+ ADAR AG+ + VTDTP RE Sbjct 603 VDERGIPRVAGGPEAIAALAEVRARQGLPPLGPVLLDADARRAGIADGPLIVTDTPSDRE 662 Query 667 TDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGW----TGGRI--TVSSSSAD 720 TD+GRVD HSSAIR+ D R T N DYPV V G W G I T S S++D Sbjct 663 TDFGRVDDHSSAIRSADDPRRTQNAAADYPVDDQPLVRGEWLLDNRSGEIEVTTSGSASD 722 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 A +PA++PAAA DG+P TAWVS L+ AVG+W+++ F P T+ ++LT +A A+ Sbjct 723 AVQPGQTSPANSPAAAFDGNPQTAWVSGGLEGAVGRWMRIGFTTPQTDLALSLT-TAKAL 781 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 G+ V +LI T GST E G+P T P G T W++ A T+DG+AG QF + ++ Sbjct 782 GSDVTSVLITTEAGSTVASGLEPGEPTTVTAPSGPTRWIQIRALRTEDGTAGNQFALGEV 841 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGP--DGVRCAAS 898 ++ S P+Q+RH V++P G+ +A W L SEL GR C P + RCA Sbjct 842 EVSNLRTS---TPLQIRHRVVLPELGAGTTVAQWLLYSELNGRAWCVADPAREKTRCAPG 898 Query 899 MALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILG 958 + L+PE + SR L+VP+ +VTP +RPR G L L+A P A+G + D G Sbjct 899 LGLSPETSSVFSRALSVPQDTAVTPSAVLRPRPGAALDRLLATPGGMTATGPRPVTDPRG 958 Query 959 SAYAAADGDPATAWTAPQRVVQHK-------------TPPTLTLTLPRPTVVTGLRLAAS 1005 S AA DGDP T WTAPQ + K PTL + LP V ++L A Sbjct 959 SPAAAVDGDPGTTWTAPQIPDEEKPEDREDDEEPADDATPTLVVHLPAEQRVESVKLVAP 1018 Query 1006 RSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGF 1065 PA PT VA++LG G Q+R +VG+ L L P +TD + +++ + D+ID N+LGF Sbjct 1019 GDY-PATPTEVAVDLGTGEQIR--EVGKDGVLRLDPAITDRIEITIREQRDLIDVNSLGF 1075 Query 1066 DQLKPPGLAEVVVLSAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVG 1125 PPG+AEV V AP APAD R + + C G + AG+ V S RTT Sbjct 1076 ATPAPPGIAEVEVFP---APRAPADG----DRVVEIRCGDGLGITAAGQVVGISARTTTA 1128 Query 1126 ALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETG 1185 AL GEPV A C + LPAGQQE+ ++PG AF VD L T G+ + A T+ + Sbjct 1129 ALRSGEPVVARACTPGELRLPAGQQEVSVNPGQAFTVDAVSL-TVGSPVDGAATTTPDVS 1187 Query 1186 AWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPG 1245 W R V++ +S R+LVVPES N GWVAR G L+P+ VNGWQQ W+VPAG G Sbjct 1188 EWTAASRAVQI-DSGPERLLVVPESTNPGWVARVD-GRELSPVVVNGWQQGWIVPAGASG 1245 Query 1246 TITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRP---TPPWRPGAWAAAGV 1302 T+ LT+ +SLYR SL +GL L+ LL + A+W + RR+ P T A G+ Sbjct 1246 TVELTYRFDSLYRWSLVVGLVLMALLLVAAWWPSSRREAVAEPRTVTTGRFTLMAAGLGI 1305 Query 1303 LAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSV 1362 L A +++ G+ V G +GV A + + V ++LA L+ PW + Sbjct 1306 LGASWLLSGWWGLAV-GIGVGVVAAA-----IPPKAGVTTTFAMMMLATVGLTAGPWHAA 1359 Query 1363 DGYAGNWASVQLLALISV 1380 GY G VQL ALI+V Sbjct 1360 GGYHGWEWWVQLPALIAV 1377 >gi|262204280|ref|YP_003275488.1| hypothetical protein Gbro_4462 [Gordonia bronchialis DSM 43247] gi|262087627|gb|ACY23595.1| hypothetical protein Gbro_4462 [Gordonia bronchialis DSM 43247] Length=1435 Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 691/1431 (49%), Positives = 871/1431 (61%), Gaps = 74/1431 (5%) Query 11 VVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFP 70 + GA+ L + QSPG+V+ DTKLDLTANPL FLARA +LW + P GQ QNQAYGY FP Sbjct 1 MAGAIFLVICLLQSPGRVAADTKLDLTANPLGFLARAAHLWTPNAPMGQVQNQAYGYFFP 60 Query 71 HGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSP 130 HG FF +G L +P W+TQRLWWAVLLTVGF G++R+AE L +G P+SR+V FALSP Sbjct 61 HGAFFALGELAHLPPWITQRLWWAVLLTVGFAGVVRLAETLRIGSPASRIVAGAVFALSP 120 Query 131 RVLTTLGSISSETLPMMLAPWVLLPTILAL-RGTSGRSVRALAAQAGLAVALMGAVNAIA 189 RVLTTLGSISSETLPMMLAPWVL+P + AL R R + AA++ AVALMGAVNA+A Sbjct 121 RVLTTLGSISSETLPMMLAPWVLVPVVAALDRRDDSRPLWQYAARSAAAVALMGAVNAVA 180 Query 190 TLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESS 249 TLA +V+WW HRP++ W R+ AWW + A WW++ L L VSPPFLDFIESS Sbjct 181 TLAALGVSVLWWLLHRPDQRWLRFGAWWAAGLLAACAWWLVPLLILSRVSPPFLDFIESS 240 Query 250 GVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMP 309 GVTT+W+SL EVLRG SWTPFV+ AGA LVT AA+L T +AAAGLAGL MP Sbjct 241 GVTTEWTSLTEVLRGASSWTPFVSSERVAGAVLVTQPAAVLATSTLAAAGLAGLCMRHMP 300 Query 310 ARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLG 369 RGR+VT++ VG+VL+ VG G L SP+A V+AFLD AG PLRN+HK P +RLPLVLG Sbjct 301 FRGRMVTLVAVGLVLMCVGFAGQLGSPIADDVRAFLDGAGAPLRNIHKFEPFLRLPLVLG 360 Query 370 LAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTF 429 +A LL+RVPLPGS P L AFAHP+R + VA +V L A++ + SL WTG++AP GT+ Sbjct 361 VAHLLARVPLPGSVPLRESLSAFAHPQRSRPVAATIVILVAVVGAGSLMWTGQLAPTGTY 420 Query 430 GALPQYWQEAADWLRTHHAATPT--PGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGV 487 LP+YWQ+AA WL H T PGR LVVPGAPFA Q+WG + DEPLQ L D PW V Sbjct 421 RDLPRYWQQAAGWLSDHADPDNTGAPGRALVVPGAPFADQLWGLTRDEPLQPLADTPWAV 480 Query 488 RDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPI 547 RD+IPLTPP IRA+DSVQR A GRPS GLA TLA QG+ +V++R DL+P+TSRSARP+ Sbjct 481 RDAIPLTPPGAIRAMDSVQRSIADGRPSPGLAATLAAQGVRFVVLRADLEPDTSRSARPL 540 Query 548 LLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPG-APYF 606 L ++AGSPGL ++A FG VGP + V D+GLRP PAI+I+ V A PG P Sbjct 541 LAQAALAGSPGLRRVAVFGPDVGPPSIRDVVRDNGLRPAMPAIQIFAVEATGFPGTGPLL 600 Query 607 AATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARE 666 + V GGPE L R+ + R G PPLGP +++ DAR AG P VTDTP RE Sbjct 601 VDAGSVTEVAGGPEALARIADLRARMGSPPLGPAILSTDARRAGRPPGPTIVTDTPADRE 660 Query 667 TDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGW------TGGRITVSSSSAD 720 TD+GRVD HSSAIRA GD R T+N V DYPV G V G W R+ VS S+AD Sbjct 661 TDFGRVDDHSSAIRAAGDPRRTHNAVADYPVDGQPLVRGEWLLDNRPDAVRVDVSGSAAD 720 Query 721 ATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAV 780 AT +P+++ AAA DGD TAWVS LQ+AVGQW+++ F P + +T+ +A A+ Sbjct 721 ATQPGQTSPSNSAAAAFDGDANTAWVSAGLQSAVGQWMRIGFTTPHSGLALTVR-TAKAL 779 Query 781 GAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDL 840 G V +++ T GST + G P+T +P G T WV AA T DGSAG QF + ++ Sbjct 780 GPDVSSVVVTTEAGSTVASGIKPGVPVTITVPSGPTRWVSIRAAETADGSAGNQFALGEV 839 Query 841 AITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDG--VRCAAS 898 +++ SGF P+ +RH V++P PPG+ +A W LG EL GR C P +RCA + Sbjct 840 SVSDLQ-SGF--PLTIRHRVVLPPLPPGTTVAQWVLGQELAGRASCVDDPAAGTIRCAPA 896 Query 899 MALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILG 958 + L E P +R L VP P +VTP V + PR G L L+ P A+G S + D G Sbjct 897 LGLTAETPGLFTRALQVPTPTAVTPAVILTPRPGDALNALLRGPGQIVATGPSAVTDPRG 956 Query 959 SAYAAADGDPATAWTA----------PQRVVQHKTP--------------------PTLT 988 AA DGDP T WTA P+R + + P PTL Sbjct 957 GPGAAVDGDPRTVWTAPKPAREESDDPERSEKPEHPERPEHSDDAAGDEDSAEPKNPTLE 1016 Query 989 LTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVS 1048 L LP V LR+ A PA PT V+++LG GPQ R VG + L P TD +S Sbjct 1017 LRLPARQRVEQLRIVAPHDY-PAAPTRVSVDLGTGPQTR--DVGADGLVRLDPADTDHIS 1073 Query 1049 VSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPADAARNRARALTVDCDHGPV 1108 +++L D+ID N+LGF PPG+AE+ + AP P N R + + C G Sbjct 1074 LTILGQRDLIDVNSLGFASQAPPGIAEIEITP---APTTPP----NDDRTVDIGCADGLG 1126 Query 1109 VAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLS 1168 + V+G+ + S+ TT AL G PV A PC P+ L G+QEL ++PGAAF VD L+ Sbjct 1127 LTVSGQVIGLSVHTTTAALRAGAPVIAHPCTSAPVRLGTGEQELSVNPGAAFSVDSVALN 1186 Query 1169 TPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPI 1228 T A L SA V E W R V V + R+LVVPES N GW AR + G L + Sbjct 1187 TDSA-LPSARVAPVEIQGWSAVDRSVTVRGADRDRLLVVPESTNPGWEAR-ADGRELDSV 1244 Query 1229 AVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQLADRP 1288 V+GWQQAWVVPAG GTI LT+ +SLYR SL +GL L+ LL + A T R+ D P Sbjct 1245 VVDGWQQAWVVPAGTSGTIHLTYRFDSLYRWSLLLGLILVALLLVAACLPT--RRTVDGP 1302 Query 1289 TPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYAL-------RRRERLRDRVTVG 1341 +G G +A+ AG +VM L + L LR R V Sbjct 1303 DE-------IDSGRTPFGVTVAAAAGTLVMAWLLSGWWGLAVGVVVGAIAVVLRPRTVVV 1355 Query 1342 LAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSE 1392 ++ A L+ PW + GY G VQL AL++V ++ AS V + Sbjct 1356 ATFVAMMAATVGLAAGPWHAPGGYNGFSWWVQLPALVAVLLMVASAVGADD 1406 >gi|333921772|ref|YP_004495353.1| hypothetical protein AS9A_4119 [Amycolicicoccus subflavus DQS3-9A1] gi|333483993|gb|AEF42553.1| Conserved hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=1387 Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/1385 (48%), Positives = 856/1385 (62%), Gaps = 18/1385 (1%) Query 4 LSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQ 63 + R+ L + VAL L+FAQSPG + DTKLDL+ +P FL RA +LW+S PFGQ QNQ Sbjct 1 MPRRGLFLAFGVALLLSFAQSPGLIVADTKLDLSVDPQGFLGRAAHLWSSLSPFGQVQNQ 60 Query 64 AYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGA 123 AYGY FPHG FFV+ +G+P WV QRLWWA+LLT GFWG++RVAEALG+G SRV+ A Sbjct 61 AYGYFFPHGAFFVVLDSVGIPAWVAQRLWWALLLTAGFWGIIRVAEALGIGSRPSRVIAA 120 Query 124 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMG 183 AFALSPRVLTT+G+ISSET PMMLAPW LLP ILAL GTS R + LAA + LAVA MG Sbjct 121 TAFALSPRVLTTIGAISSETTPMMLAPWALLPVILALGGTSRRPLWQLAAGSALAVACMG 180 Query 184 AVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFL 243 A+NA+AT G A++WW HRPNR W +TAWW+ +ATLWWV+ L + VSPPFL Sbjct 181 AINAVATAGGAALALLWWIAHRPNRRWLTFTAWWVPFGLMATLWWVIPLFLMGAVSPPFL 240 Query 244 DFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGL 303 D+IES+G TT+W+SLVEVLRGTDSW PFV+P+ AGA LVT +L T VAAAGLAGL Sbjct 241 DYIESAGTTTRWTSLVEVLRGTDSWAPFVSPDRVAGAALVTQPVTVLATGAVAAAGLAGL 300 Query 304 TSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIR 363 MPA+GRLV +L+VG+ + G+ G L SP+A V+AFLD +G PLRNVHK+ P+IR Sbjct 301 CMRGMPAKGRLVFILVVGLAGIGAGYAGDLGSPIADQVRAFLDGSGAPLRNVHKIEPLIR 360 Query 364 LPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRV 423 LP+VLG+A LL RVPLPG+ W AFA PER VAV + + AL+V+TS+AWTG++ Sbjct 361 LPIVLGIAHLLGRVPLPGAVRSDEWRTAFARPERHPLVAVGTLTIIALVVATSVAWTGKL 420 Query 424 APPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDG 483 AP G + +P +W++AA WL + T R LVVP +PF +Q WG + DEPLQ L Sbjct 421 APRGAYSEIPDHWEQAAVWLADNSGDGATADRALVVPASPFGSQTWGLTRDEPLQPLTQT 480 Query 484 PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRS 543 PWGVRD IPL PP IR+LD++QR+ A GR S GLA L QG Y++VRNDLDPETSR+ Sbjct 481 PWGVRDVIPLIPPGGIRSLDAMQRVLADGRSSPGLAPALLAQGYRYLVVRNDLDPETSRT 540 Query 544 ARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPAN-PG 602 P+L+ +S+ SPG K+AEFG V +GLR PA+EIYRV+ + P Sbjct 541 VPPLLVRQSLQTSPGFEKVAEFGDSGDAAARNTAVRGAGLRVPLPAVEIYRVTVGSEWPS 600 Query 603 APYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTP 662 PY +D + V GGPE L+R++ER G P P+L+++DA A LP+ V VTDTP Sbjct 601 GPYLVDSDAVPIVQGGPESLVRINERPETDGAPV--PILISSDAERAELPIGGVTVTDTP 658 Query 663 VARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADAT 722 ARETD+GRVDH SA+ AP D R T NRVPDY A +V G +TVSSS+ DA Sbjct 659 RARETDFGRVDHQRSAVLAPEDPRRTQNRVPDY-AASAPLIVAESEGASVTVSSSAGDAA 717 Query 723 AMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGA 782 + V P PA+AVDG+P T+W+S+ QAAVGQWL++DF P+ ++ +T S A+G Sbjct 718 QLGAVQPGRGPASAVDGNPDTSWLSSTFQAAVGQWLRLDFPEPLERVLLRVTTSPEAIGP 777 Query 783 QVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAI 842 VR + + T NGSTT + G+P+T A+P G T WVR TA +TD G+ G QFGI ++A+ Sbjct 778 TVRVLDVTTPNGSTTAIVESPGEPVTVAVPAGPTDWVRITARSTDTGTRGDQFGIANVAV 837 Query 843 TQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALA 902 +A+G PV R +P + + W+LG E GR C GPD V CA +ALA Sbjct 838 ---EANGREVPV--RRIQTLPPLTTQAPVTAWELGQEFPGRRACVDGPDQVLCAPDLALA 892 Query 903 PEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYA 962 PEE L+R + V PV VTP + VR G L +L+ S G S + D G+A+A Sbjct 893 PEEAGELNRRIVVEEPVEVTPEMTVRAVPGDGLDELLTDESALSVEGASSIDDPRGNAFA 952 Query 963 AADGDPATAWTAP-QRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLG 1021 AADGDP T W AP P+LTL LP P +V +R+ + PA PT V ++ G Sbjct 953 AADGDPTTVWYAPLGSTPADDARPSLTLRLPEPEMVRAVRITPAAGPAPARPTEVRVSNG 1012 Query 1022 DGPQVRQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSA 1081 + L+ GE + + + PRVT +V+V+L DW+ V + G+ + PPGLAE+ VL Sbjct 1013 NSAVTASLRAGEDSVIEMEPRVTSSVTVTLTDWEQVRTPDLFGWSPVMPPGLAELAVLGE 1072 Query 1082 GGA-PIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCER 1140 P+ AD R + + C++GP V V SI L G PV A C Sbjct 1073 DDEIPVQRAD----EDRIIEIGCENGPQVTSGTASVPMSISARASQLRAGAPVPAELCGE 1128 Query 1141 EPIALPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESA 1200 E ++LPAGQ E+ PG+ F+VD L+ + T + W T R V +P + Sbjct 1129 ETLSLPAGQVEVTADPGSPFIVDTLTLAAEPTAPGAVTAVAPAVVNWEETQRTVAIPAAD 1188 Query 1201 TSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRAS 1260 T R+L VPES N W+A S G LTP+ VNGWQQ W+VP+G G +TLTF + +YR + Sbjct 1189 TDRILGVPESYNEAWIATDSNGTVLTPVPVNGWQQGWIVPSGVSGEVTLTFGYDQIYRTA 1248 Query 1261 LAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGT 1320 L GL LL L L T R PWRP A G L A VIA G + Sbjct 1249 LFGGLLLLVPLIFLTVIPT-RPARPREAATPWRPHLIAPFGALIAVYVIAGPVGTAIAAL 1307 Query 1321 ALGVRYALRRR--ERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALI 1378 A+ +R R+ G++A + A AALS PWR+ GY G+ +QLLA + Sbjct 1308 LAAAAVAVTKRWGPATASRLLTGISALAMGSAAAALSTGPWRAPSGYLGHSGWLQLLAFL 1367 Query 1379 SVSVV 1383 +V+ V Sbjct 1368 AVTAV 1372 >gi|296394563|ref|YP_003659447.1| coagulation factor 5/8 type domain-containing protein [Segniliparus rotundus DSM 44985] gi|296181710|gb|ADG98616.1| coagulation factor 5/8 type domain protein [Segniliparus rotundus DSM 44985] Length=1427 Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/1403 (49%), Positives = 868/1403 (62%), Gaps = 40/1403 (2%) Query 7 KWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYG 66 +WL A AL FAQSPG ++ DTKLDLT NP+ FL +A +LW+ P GQ +NQAYG Sbjct 15 RWLAC--AAITALCFAQSPGLIAADTKLDLTGNPVGFLRQAWSLWSDTAPLGQPRNQAYG 72 Query 67 YLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAF 126 YLFPHG FF +G LL +P W+ QR WW+ LL GF G++R+AEALG+G P+SR++ A A+ Sbjct 73 YLFPHGAFFALGSLLHIPMWIVQRCWWSALLCAGFLGVVRLAEALGLGTPASRMIAAAAY 132 Query 127 ALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVN 186 SPRV+TTLG+ISSET PMMLAPW L+P + A +R LAA++ +AVALMGAVN Sbjct 133 LASPRVMTTLGAISSETAPMMLAPWALIPLVRAWTAPD-PPMRRLAARSAVAVALMGAVN 191 Query 187 AIATLAGCLPAVIWWACHRP-----NRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPP 241 A+AT A CLPA +WWA N W ++AWW+ + LA WW+ AL L VSPP Sbjct 192 AVATAAACLPAFLWWAGRARRARRLNPRWVAFSAWWIPCLLLACAWWITALVLLGSVSPP 251 Query 242 FLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLA 301 FLDFIES+ VTT+W+SLVEVLRGTD WTPFV P+ A LV+ +L T ++AA GLA Sbjct 252 FLDFIESARVTTRWNSLVEVLRGTDGWTPFVDPSRMASTGLVSYPVLVLATGVLAAVGLA 311 Query 302 GLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPV 361 GL + P RGRL+ +L VGV+ + +G+ G L P+A P +AFLDAAG PLRNVHK+ P+ Sbjct 312 GLCLRSTPDRGRLLVILGVGVLGVCIGYAGPLGGPLAEPARAFLDAAGAPLRNVHKLDPL 371 Query 362 IRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTG 421 IRLPL LG+A L+ +P PA A PER + A A+ L + +S + +WTG Sbjct 372 IRLPLSLGVASALAGLPERARELFPA----LARPERHRAAAAAIAVLMVVALSAAASWTG 427 Query 422 RVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLG 481 R+AP + ALP+YW+ A+ WL H AA P R L+ PGAP+A QVWG + DEP+Q L Sbjct 428 RLAPGKPYRALPEYWRSASGWLHEHLAAQPPGARALIAPGAPWADQVWGLTRDEPIQALA 487 Query 482 DGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETS 541 D PW VRD+IPLTPP IR+LDSVQRLFA GR S GLADTL QG +YV++RNDLDPETS Sbjct 488 DFPWAVRDAIPLTPPGAIRSLDSVQRLFAEGRASGGLADTLLAQGFAYVVLRNDLDPETS 547 Query 542 RSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRV--SAPA 599 SARPIL H+++ GSPGL K+AEFG G + G V D LR RYPA+EIYRV S + Sbjct 548 HSARPILAHQTVEGSPGLKKVAEFGPLTGAGRIPGAVVDDDLRARYPAVEIYRVTGSEHS 607 Query 600 NPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVT 659 P PY D VDGGPE LL E G P GP+L+ DAR AG+ V VT Sbjct 608 EPPGPYLVGLDDTTVVDGGPEALLSTIEHAHELGDPEPGPILLRGDARRAGIEPATVTVT 667 Query 660 DTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSA 719 DTP RETDYGRVD H SAIRA D + N V DYP GA V G W G R+TVSSS + Sbjct 668 DTPALRETDYGRVDDHVSAIRADDDPKRAANSVADYPTDGAAMVRGVWEGARVTVSSSVS 727 Query 720 DATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATA 779 +A + V+P ++P AA DGDP+T+W+S L AVGQWLQ+DF PV++ VT+T S A Sbjct 728 EANGLSLVSPGNSPRAAFDGDPSTSWLSAGLDHAVGQWLQLDFASPVSDPQVTVTVS-RA 786 Query 780 VGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITD 839 +G V R+ I T G+ TLR +P +A P G+T W+R TA T +G+AG QFGI++ Sbjct 787 IGPAVDRLEIATERGTATLRDVVTDRPASATAPTGQTHWLRITATGTANGTAGNQFGISE 846 Query 840 LAITQYD-ASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAAS 898 L + +D A+G PV R VLVP P + + W+LG E GR GCA GP +CA + Sbjct 847 LHV--FDGATGKEAPV--RFKVLVPDAGPNTIVRQWELGQEFPGRAGCARGPARTQCAQA 902 Query 899 MALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILG 958 +ALAPEEP SRTL V R V P ++VR R P DL+A P A+G S D G Sbjct 903 LALAPEEPTVFSRTLEVARAADVLPALFVRSRLSPASTDLLAEPGRVLATGASASGDSRG 962 Query 959 SAYAAADGDPATAWTAPQRVVQHKTP-PTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVA 1017 SAYAA DGDP T+WTA ++ P P LTL LPRP V LR+ + LPA P +A Sbjct 963 SAYAAVDGDPGTSWTASPSALKPGAPKPRLTLQLPRPADVAQLRITPAAGALPARPVKIA 1022 Query 1018 INLGDGPQVRQLQVGELTTLW-LHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEV 1076 ++LGDG QVR + + + + L PR TD V +++L W DV++ NALGF +L+PPG AE Sbjct 1023 VDLGDGRQVRDIDPDKGSVVVNLRPRRTDHVVITVLAWQDVLNVNALGFAELQPPGFAEA 1082 Query 1077 VVLSAGGAPIAPADAARNRAR-----ALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGE 1131 +L G + P AA+++ R ++ VDC+HGPV+ + + V T++ TV AL G Sbjct 1083 QLLGPDGRAV-PGSAAQDQRRLDESESIVVDCEHGPVLKIGAKTVPTAVTATVQALRSGA 1141 Query 1132 PVAALPCEREPIALPAGQQELLISPGAAFVVDG-----AQLSTPGAGLSSATVTSAETGA 1186 V A PC+ PI L G ++ ++PG AF VD +L P A A A+ + Sbjct 1142 VVRATPCDFTPIRLGPGPHDVTVAPGNAFTVDSIVLRDVRLPAPHA----AHPQPADVRS 1197 Query 1187 WGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGT 1246 WG R++ VP++A R+LVVPES+N GW A + G L P+ VNGWQQ W+VPA G+ Sbjct 1198 WGVDSRDIAVPKAAVERILVVPESVNPGWEA-VAGGRPLPPVTVNGWQQGWLVPADFEGS 1256 Query 1247 ITLTFAPNSLYRASLAIGLALLPLLALLAFW-RTGRRQLADRPTPPWRPGAWAAAGVLAA 1305 + L F N+ Y L GL+ L LA LA RR+ + P R A L Sbjct 1257 VQLRFPRNTWYHVGLLAGLSGLLPLAALALTPEAARRRDPEPLGNPLRARRLGALAGLCC 1316 Query 1306 GAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGY 1365 ++A G+ V + L RR R R +++ + A A L+ PWRS Y Sbjct 1317 AWLVAGWGGLAAAAALGVVFWQLSRRGRDVARAAALVSSLSMTGASALLALGPWRSPH-Y 1375 Query 1366 AGNWASVQLLALISVSVVAASVV 1388 GN + QLLALI++ SV+ Sbjct 1376 LGNTLAPQLLALIALGGAVCSVI 1398 >gi|317508100|ref|ZP_07965784.1| hypothetical protein HMPREF9336_02156 [Segniliparus rugosus ATCC BAA-974] gi|316253611|gb|EFV12997.1| hypothetical protein HMPREF9336_02156 [Segniliparus rugosus ATCC BAA-974] Length=1390 Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 678/1397 (49%), Positives = 863/1397 (62%), Gaps = 42/1397 (3%) Query 17 LALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFFV 76 +AL FAQSPG ++ DTKLDLT NP FL +A +LW+ P GQ +NQAYGYLFPHG+FF Sbjct 3 VALCFAQSPGLIAADTKLDLTGNPTGFLRQAWSLWSDIAPLGQPRNQAYGYLFPHGSFFA 62 Query 77 IGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTTL 136 +G LL +P WVTQR WW+VLL +GF G++++ E LG+G P+SR+V A A+ SPRV+TTL Sbjct 63 LGSLLHIPPWVTQRCWWSVLLCLGFVGVVKLGETLGIGTPTSRMVAASAYLASPRVMTTL 122 Query 137 GSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIATLAGCLP 196 G+ISSET PMMLAPWVL+P + S S+R LAA++ AVALMGAVNA+AT A CLP Sbjct 123 GAISSETAPMMLAPWVLIPVVRVWTEESP-SMRRLAARSAGAVALMGAVNAVATAAACLP 181 Query 197 AVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSGVTTQWS 256 A +WWA + W +T WW+ + LA WW+ AL L VSPPFLDFIESS VTT+W+ Sbjct 182 AFLWWAARVRSARWRAFTVWWIPCLVLACAWWLAALLLLGSVSPPFLDFIESSRVTTRWT 241 Query 257 SLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPARGRLVT 316 SLVEVLRGTD WTPFV P+ LV+ L T +AA GL GL P RG L Sbjct 242 SLVEVLRGTDGWTPFVDPSRMGSTGLVSYPVLALATGALAAVGLVGLCHRRTPHRGMLAA 301 Query 317 MLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGLAQLLSR 376 +LLVGV+ L VG+ G L SP+A P + FLD AG PLRNVHK+ P++RLPL LG+A L Sbjct 302 ILLVGVLGLCVGYSGPLGSPLAEPARVFLDGAGAPLRNVHKLDPLVRLPLSLGVASALGS 361 Query 377 VPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFGALPQYW 436 +P S R + R+ A PER + VA+V L A+ +S S AWTGR+AP + LP YW Sbjct 362 LP---SRSR-DFFRSLARPERHRTAPVAIVVLIAVALSASAAWTGRLAPGKPYRDLPDYW 417 Query 437 QEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGVRDSIPLTPP 496 + A+ WL+ H A P R L+ PG+P+A QVWG + DEP+Q L + PW VRD++PL P Sbjct 418 RSASAWLQHHLADQPPGARALIAPGSPWADQVWGLTRDEPIQALAEFPWAVRDAVPLVPS 477 Query 497 QTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPILLHRSIAGS 556 IR+LD+VQRLFA GR S+GLAD L QG +Y+++RNDLDPE S S RPIL H+++ GS Sbjct 478 GAIRSLDAVQRLFAEGRSSSGLADALLAQGFAYLVLRNDLDPEASHSTRPILAHQTVEGS 537 Query 557 PGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRV--SAPANPGAPYFAATDQLAR 614 PGL K+AEFG G + G V D LR RYPA+EIYRV + P PY D Sbjct 538 PGLTKVAEFGPLTGAGRIPGAVVDDDLRARYPAVEIYRVVGGEHSEPPGPYLVGLDGATV 597 Query 615 VDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARETDYGRVDH 674 VDGG E LL E G P GP+L+ ADAR AGL P V VTDTP+ R TDYGRVD Sbjct 598 VDGGAEALLSTIEHAHELGDPEPGPMLLRADARRAGLDPPVVVVTDTPMLRGTDYGRVDD 657 Query 675 HSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPASAPA 734 H SA++ D + N VPDYP GA V G W G R++VSSS ++A + V+P ++P Sbjct 658 HVSAVQTDKDPKRVANAVPDYPTEGAAVVRGVWEGARVSVSSSVSEANGLSLVSPGNSPR 717 Query 735 AAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIETVNG 794 AA DGDP+T+W+S L AVGQWLQ+DFD PV++ VT+T S A+G V ++ I T G Sbjct 718 AAFDGDPSTSWLSAGLDRAVGQWLQLDFDAPVSDPQVTVTVS-RAIGPAVNQLEIATEQG 776 Query 795 STTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGFAHPV 854 + TLR A +P +A P G+T W+R TA T++G+AG QFGI++L + +G A PV Sbjct 777 TATLRDVVADRPASATAPTGQTHWLRITATGTENGTAGNQFGISELQVFDRK-TGEAVPV 835 Query 855 QLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLT 914 R VLVP P + W+LG E GRP CA GP +CA S+ LAPEEP SRT+ Sbjct 836 --RFKVLVPDAGPDVRVRQWELGQEFPGRPSCARGPVQTQCAQSLTLAPEEPTVFSRTIG 893 Query 915 VPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTA 974 V R V P ++VR R P DL+A P A+G+S D GSA+A+ADGDP TAWTA Sbjct 894 VARATEVLPALFVRSRLSPASTDLLAEPGRILATGESASGDSRGSAFASADGDPRTAWTA 953 Query 975 PQRVVQHKTP-PTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQ-VG 1032 ++ P P LTL LP P V +R+ + LPA PT +A++LGDG Q+R + Sbjct 954 SPNALKPGAPKPRLTLQLPAPADVARVRIVPAAGALPARPTRIAVDLGDGRQIRDIDPDA 1013 Query 1033 ELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPADA- 1091 + TT+ L TD V +++LDW D ++ N+LGF +L+PPGLAEV +L G + P A Sbjct 1014 DSTTVELRAHRTDRVVITVLDWQDTLNVNSLGFAELQPPGLAEVELLGPDGG-LVPGSAR 1072 Query 1092 ----ARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPA 1147 R+ R +TVDC+HGPV+ + R V TS+ TVGAL G V A PC+ PI L Sbjct 1073 QSGLRRDEDRVVTVDCEHGPVLKIGSRAVPTSVTATVGALRSGAVVRATPCDFNPIPLGP 1132 Query 1148 GQQELLISPGAAFVVDG-----AQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATS 1202 G +++ +PG AFVVD +L P A A A+ +W T R++ V S Sbjct 1133 GSHDVVAAPGNAFVVDSLVLRDVRLPPPRA----ADPQRADVRSWDVTARDIAVRLSEEV 1188 Query 1203 RVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLA 1262 R+LVVPES+N GW A T+ G L P+ VNGWQQ W+VPA GTI L F N+ YRA L Sbjct 1189 RILVVPESVNPGWQA-TAAGQTLRPVTVNGWQQGWIVPAHLAGTIQLRFPLNTWYRAGLG 1247 Query 1263 IGLALLPLLALLAFWRTGRRQLADRPTPPWRP-----GAWAAAGV--LAAGAVIASIAGV 1315 IGLA L LA LA RR+ D TP P GA A G L G A+IA Sbjct 1248 IGLAGLVPLAALALAPALRRKQRDLGTPTALPRARLFGALAGLGCAWLITGPAGAAIAAT 1307 Query 1316 MVMGTALGVRYALRRRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLL 1375 + +G ++L RR R A + A L+ PWRS Y GN + QLL Sbjct 1308 LGLGF-----WSLSRRGGDVPRAAAIAAGLSMTAAAGMLALGPWRSPH-YLGNALAPQLL 1361 Query 1376 ALISVSVVAASVVATSE 1392 LI++ V S V E Sbjct 1362 TLIALGSVVCSSVFDRE 1378 >gi|296138155|ref|YP_003645398.1| coagulation factor 5/8 type domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296026289|gb|ADG77059.1| coagulation factor 5/8 type domain protein [Tsukamurella paurometabola DSM 20162] Length=1404 Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/1400 (48%), Positives = 858/1400 (62%), Gaps = 45/1400 (3%) Query 17 LALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQAYGYLFPHGTFFV 76 LAL+F SPG++ DTKLDLTANPL FLARA N+W+S P GQ QNQAYGY FPHG+FF Sbjct 8 LALSFLSSPGKIVADTKLDLTANPLGFLARAANVWSSQSPLGQVQNQAYGYFFPHGSFFA 67 Query 77 IGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGAVAFALSPRVLTTL 136 +G +L VP W+TQRLWWA+LL GFWG++R+AEAL G SR+V A AF ++P VLTTL Sbjct 68 LGQVLHVPPWITQRLWWALLLFAGFWGIVRLAEALNTGSRGSRIVAAAAFVIAPHVLTTL 127 Query 137 GSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMGAVNAIATLAGCLP 196 G+ISSET P+MLAPWVLLP + ++G +R LAA++ +AVALMGAVNA+AT C Sbjct 128 GAISSETAPVMLAPWVLLPLVQMVQGHDA-PLRNLAARSAVAVALMGAVNAVATGLACAV 186 Query 197 AVIWWACH----RPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFLDFIESSGVT 252 A +WW H R +W ++AWW + +ALAT WW++ L + VSPPFL+FIESS T Sbjct 187 AALWWLLHVRFGAGTRRFWTFSAWWTVCVALATTWWIVPLLIMGRVSPPFLEFIESSRAT 246 Query 253 TQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGLTSPAMPARG 312 TQW+SL EVLRGT SW+PF++ AGA L T AA++ T L+AAAG+AGLT P RG Sbjct 247 TQWASLPEVLRGTTSWSPFISDERAAGAMLTTTPAAVVVTGLLAAAGIAGLTMRHTPKRG 306 Query 313 RLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIRLPLVLGLAQ 372 +T+LLVG+ + G+ GL SPVA PV+ FLD+ G PLRNV+K+ P +RLPLV G+A Sbjct 307 VWITVLLVGLAGIGAGYASGLGSPVAEPVRVFLDSVGAPLRNVYKLEPFLRLPLVFGIAH 366 Query 373 LLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRVAPPGTFGAL 432 LL+R PLPG+ A AHPERD+ A A+ + L ++ +AW G++AP G + + Sbjct 367 LLARAPLPGTVDLTRVRAAIAHPERDRVAAGALAVVVVLTLAGGMAWAGKLAPRGPYQKI 426 Query 433 PQYWQEAADWLRTHHAATPTPG-----RVLVVPGAPFATQVWGTSHDEPLQVLGDGPWGV 487 P YW +AA WL H + T PG R LVVPGAPF Q+WG + DEP+Q L + PW V Sbjct 427 PDYWGQAAGWLADHASGT-APGQARAERALVVPGAPFGAQLWGLTRDEPIQPLAETPWAV 485 Query 488 RDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRSARPI 547 RD+IPL PP IRALDSVQRLF+AG PSAGLA TL RQGI Y+++R DLDP+TSRSARP Sbjct 486 RDAIPLNPPGAIRALDSVQRLFSAGTPSAGLAPTLRRQGIGYLVLRADLDPDTSRSARPA 545 Query 548 LLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAPANPGAPYFA 607 L +I GSPG+ ++A FG P + DSGLRP PAI IY+V P PY A Sbjct 546 LARAAILGSPGITEVARFGPDTAPPTVKNVTVDSGLRPPLPAITIYQVDDRDVPAGPYLA 605 Query 608 ATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQVAVTDTPVARET 667 + RV GGPE LL L G+ +GP L+++DA AAGLP VTDTP RET Sbjct 606 DLPDIPRVAGGPESLLTLQTDAAAAGRREIGPALLSSDAAAAGLPAGPTTVTDTPKNRET 665 Query 668 DYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPDV 727 DYGRVD HSSAIR+ D R T NR+PDYPV GA V G W G ++ SSS++DAT + V Sbjct 666 DYGRVDDHSSAIRSASDPRRTLNRLPDYPVTGAGLVDGEWDGATVSASSSASDATQLGTV 725 Query 728 APASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRI 787 P ++PAAAVDGD T+WVS+ L AVGQWLQ D R + VT+T A+G V R+ Sbjct 726 LPGASPAAAVDGDKDTSWVSSGLDHAVGQWLQFDLPRAREDLAVTVT-VGRALGPAVTRL 784 Query 788 LIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYDA 847 +I T G+ AG P+T P T W+R TAA T + S G QF I++ +T Sbjct 785 MISTEAGTVYSDPVTAGTPITLVAPSDSTRWLRITAAETANRSWGNQFAISEARLTDART 844 Query 848 SGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGC--APGPDG----VRCAASMAL 901 + RH V+VPG G W G + +GR GC PGPDG V+C A +A+ Sbjct 845 D---TTIPARHDVVVPG--TGLQPTRWVFGQDTMGRSGCVVTPGPDGRDGPVQC-ADIAI 898 Query 902 APEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAY 961 PEEP L RT+ P +VTP + +R R G L+ L+ APS + D+ + D G+ Sbjct 899 GPEEPGALRRTVNGPGAPAVTPTMTLRARPGQALSTLLGAPSAPSSFADAAVGDGRGNGG 958 Query 962 AAADGDPATAWTAPQRVVQHKTP-PTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINL 1020 AA+DGDP T WTAPQ P P L L LP P +VTGL LA R PA PT V ++L Sbjct 959 AASDGDPNTVWTAPQSSTDATAPKPVLRLRLPAPQLVTGLTLALPRGEAPARPTQVGVDL 1018 Query 1021 GDGPQVRQLQV-GELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL 1079 G G QVR ++ + T+ L P +TD++++SLLDWD+ I+ N LGF + GLA+V L Sbjct 1019 GTGRQVRDIETDADTATIALEPAITDSIAISLLDWDERINVNTLGFPEKMAAGLADVSAL 1078 Query 1080 SAGGAPIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCE 1139 GAP+ P + R +TV C+ GP + + R V I +T +L DG PV A+PCE Sbjct 1079 GPDGAPV-PGSTPASPDRPVTVSCESGPSLRIGDRTVRFRIESTARSLRDGAPVRAVPCE 1137 Query 1140 REPIALPAGQQELLISPGAAFVVDGAQLS-TPGAGLSSATVTSAETGAWGPTHREVRVPE 1198 P+ LP G+Q+++ +PG AF V+ L A + A TS +W P R + V Sbjct 1138 SGPLPLPGGRQQVVATPGDAFSVETLTLDTPEAAAATPAATTSPRIQSWTPDRRIIAVTH 1197 Query 1199 SATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYR 1258 S RVLVVPES NSGW A G L + VNGWQQ WVVP G G +TL ++ N+ YR Sbjct 1198 SEVERVLVVPESRNSGWAATAPDGTPLRAVTVNGWQQGWVVPPGVDGNVTLRYSLNATYR 1257 Query 1259 ASLAIGLALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAG---- 1314 L GL LL +LA LA R A+ P W+P AWA AG L GAV ++G Sbjct 1258 IGLFGGLMLLLILASLALTRGAPAGRAE-PVQAWQP-AWAIAG-LGIGAVSFVLSGWPGL 1314 Query 1315 --VMVMGTALGVRYALR----RRERLRDRVTVGLAAGGLILAGAALSRHPWRSVDGYAGN 1368 G A V L+ RR +R G A G++L L+ PW + GY G+ Sbjct 1315 AIWATTGAATAVISRLQVSEDRRAAIRVFCAAGFTAAGMLL----LATGPWHAESGYVGH 1370 Query 1369 WASVQLLALISVSVVAASVV 1388 Q LAL + ++A S V Sbjct 1371 GPWPQGLALAGILIMAWSAV 1390 >gi|298527629|ref|ZP_07015038.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298497423|gb|EFI32717.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=541 Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/541 (99%), Positives = 540/541 (99%), Gaps = 0/541 (0%) Query 860 VLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPV 919 +LVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPV Sbjct 1 MLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPV 60 Query 920 SVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVV 979 SVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVV Sbjct 61 SVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVV 120 Query 980 QHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWL 1039 QHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWL Sbjct 121 QHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWL 180 Query 1040 HPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPADAARNRARAL 1099 HPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL AGGAPIAPADAARNRARAL Sbjct 181 HPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLGAGGAPIAPADAARNRARAL 240 Query 1100 TVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAA 1159 TVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAA Sbjct 241 TVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAA 300 Query 1160 FVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVART 1219 FVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVART Sbjct 301 FVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVART 360 Query 1220 STGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRT 1279 STGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRT Sbjct 361 STGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRT 420 Query 1280 GRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVT 1339 GRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVT Sbjct 421 GRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVT 480 Query 1340 VGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRM 1399 VGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRM Sbjct 481 VGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRM 540 Query 1400 Q 1400 Q Sbjct 541 Q 541 >gi|289760342|ref|ZP_06519720.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|289715906|gb|EFD79918.1| transmembrane protein [Mycobacterium tuberculosis T85] Length=541 Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/541 (99%), Positives = 539/541 (99%), Gaps = 0/541 (0%) Query 860 VLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPV 919 +LVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPV Sbjct 1 MLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPV 60 Query 920 SVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVV 979 SVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVV Sbjct 61 SVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVV 120 Query 980 QHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWL 1039 QHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWL Sbjct 121 QHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWL 180 Query 1040 HPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGAPIAPADAARNRARAL 1099 HPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVL GGAPIAPADAARNRARAL Sbjct 181 HPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLGVGGAPIAPADAARNRARAL 240 Query 1100 TVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAA 1159 TVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAA Sbjct 241 TVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAA 300 Query 1160 FVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVART 1219 FVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVART Sbjct 301 FVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVART 360 Query 1220 STGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRT 1279 STGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRT Sbjct 361 STGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRT 420 Query 1280 GRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVT 1339 GRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVT Sbjct 421 GRRQLADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVT 480 Query 1340 VGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRM 1399 VGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRM Sbjct 481 VGLAAGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRM 540 Query 1400 Q 1400 Q Sbjct 541 Q 541 >gi|326385229|ref|ZP_08206894.1| hypothetical protein SCNU_19897 [Gordonia neofelifaecis NRRL B-59395] gi|326196048|gb|EGD53257.1| hypothetical protein SCNU_19897 [Gordonia neofelifaecis NRRL B-59395] Length=1444 Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/1305 (48%), Positives = 801/1305 (62%), Gaps = 50/1305 (3%) Query 4 LSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQ 63 LSR+ VV V+L + Q PG++SPDTKLDLTA+P+ FLARA +LW+ D P GQ QNQ Sbjct 13 LSRRETAVVALVSLVICLLQRPGRISPDTKLDLTADPIGFLARAAHLWSPDAPMGQIQNQ 72 Query 64 AYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGA 123 AYGY FPHG FF +G +L VP W+TQR WWA+LLTVGF G++R+AEAL VG SR++ A Sbjct 73 AYGYFFPHGLFFAVGEVLHVPPWITQRFWWALLLTVGFIGVVRLAEALRVGSFGSRLIAA 132 Query 124 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILAL-RGTSGRSVRALAAQAGLAVALM 182 AF L+PRV+TTLG+ISSETLPMMLAPWVLLP + AL R + AA++ AVALM Sbjct 133 WAFVLAPRVMTTLGTISSETLPMMLAPWVLLPVVRALDRPDDALPLWRHAARSACAVALM 192 Query 183 GAVNAIATLAGCLPAVIWWAC------HRPNRLWWRYTAWWLLAMALATLWWVMALTQLH 236 GAVNA+AT A +VIWWA R + WW + LA +WW++ L L Sbjct 193 GAVNAVATAAAVAVSVIWWALATVGRDGDRRRRGLVFGGWWGAGLVLACIWWIVPLLILS 252 Query 237 GVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVA 296 VSPPFLDFIES+GVTT+W+SL EVLRGTDSWTPFV+P GA LV+ AA++ T ++A Sbjct 253 RVSPPFLDFIESAGVTTEWTSLTEVLRGTDSWTPFVSPERAVGAVLVSEPAAVIATGVLA 312 Query 297 AAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVH 356 AAGLAGLT A+P R RLVT+L+VG++ L +G+ G L SP+ V AFLD +G LRNVH Sbjct 313 AAGLAGLTMRALPHRRRLVTILVVGLLALCLGYPGALGSPIRDGVIAFLDGSGAALRNVH 372 Query 357 KVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTS 416 K P+IRLPL LG+A LL+RV LP + ++ A A+V + A + S Sbjct 373 KFDPLIRLPLALGIAHLLARVRLPAR-----------NRGTERGFAAAMVVVIAAFGTGS 421 Query 417 LAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEP 476 L WTG +AP ++ A+P YWQ+ ADWL + TP R LVVPGAPFA QVWG + DEP Sbjct 422 LLWTGGLAPAKSYRAIPDYWQQTADWLDAAQRDSATPSRALVVPGAPFADQVWGLTRDEP 481 Query 477 LQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDL 536 LQ L PW VRD+IPLTPP IR +DSVQR ++GR S GLA+ LA QGI Y+++R DL Sbjct 482 LQALAQSPWAVRDAIPLTPPGAIRVMDSVQRTLSSGRGSPGLANALAEQGIGYLVLRADL 541 Query 537 DPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVS 596 DP TSRSARP+++ ++I SPGL++ A FG V P L G V D GLRP PA+ IYRV+ Sbjct 542 DPATSRSARPLVVAQAIRNSPGLSEAARFGPEVAPPTLDGVVVDDGLRPPMPAVTIYRVT 601 Query 597 APANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQPPLGPVLMTADARAAGLPVPQV 656 A G P D ++RV GGPE LL +++ RR G PLGP L+TADAR AGLP Sbjct 602 PGAVAGQPGLVDVDAMSRVSGGPEALLSVEDSRRRAGLDPLGPALLTADARRAGLPDRPE 661 Query 657 AVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGG------ 710 VTDTPV RETD+GRVD HSSAIRAP D R T N PDYPV G V W Sbjct 662 IVTDTPVDRETDFGRVDDHSSAIRAPDDPRLTKNAAPDYPVDGQPLVEAQWLLDNQPGQV 721 Query 711 RITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAV 770 R+T S S++DAT +PA++ AAA DGDP AWVS L++AVG+WL V F +P ++ Sbjct 722 RVTSSGSASDATQPGRTSPANSTAAAFDGDPDIAWVSRGLESAVGRWLAVGFTQPRSDLA 781 Query 771 VTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGS 830 VT+T +A A+G V IL+ T GST + G P P G T V+ A T +G+ Sbjct 782 VTVT-TANALGPDVSTILLSTDAGSTVATGVKPGVPTRILAPSGPTSNVQIRAIDTANGT 840 Query 831 AGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGP 890 AG QF I++L+ + P+ +R ++P ++GW LG EL C Sbjct 841 AGNQFAISELSFADANTD---VPLAIRQRTVLPTLDAADTVSGWVLGPELGPASDCVTAG 897 Query 891 DG-VRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASG 949 DG VRC+A++ L E P RTL+VP V V +RPR +L+DL+A T A G Sbjct 898 DGRVRCSAALGLNSETPGVFGRTLSVPTAADVGVRVTLRPRASGELSDLLARTGTITADG 957 Query 950 DSDLVDILGSAYAAADGDPATAWTAPQ--RVVQHKTPPTLTLTLPRPTVVTGLRLAASRS 1007 S + D LG+A AA DGDP T WTAP K P+LT+ LP V+GLRL A + Sbjct 958 SSAVSDPLGNAAAAVDGDPNTTWTAPDPGASTGKKDRPSLTVRLPAVREVSGLRLVAPQD 1017 Query 1008 MLPAHPTVVAINLGDGPQV---RQLQVGELTTLWLHPRVTDTVSVSLLDWDDVIDRNALG 1064 PA PT V + L +G + + VG + + R DTV +++ D+ID + LG Sbjct 1018 Y-PARPTRVTVELREGGRTVGRTRADVGRDGLISVPARRADTVVLTIEKSSDLIDVDDLG 1076 Query 1065 FDQLKPPGLAEVVVLSAGGAPIAPADAARNRARALTVDCD------HGPVVAVAGRFVHT 1118 F + P G++EV VL G P AP D R + + CD +G V +G+ + Sbjct 1077 FAKDAPVGISEVQVLPGGANP-APDD-----QRPIEIRCDTDASGPYGLGVTASGQVIRL 1130 Query 1119 SIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQLS-TPGAGLSSA 1177 ++TT GAL GEP+ A C P+ L AG+QE+ ++PG AF VD L ++A Sbjct 1131 QVQTTAGALRRGEPIPATTCPGPPLHLAAGEQEVSVNPGQAFTVDAVTLRPVDAPATTAA 1190 Query 1178 TVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARLTPIAVNGWQQAW 1237 VT W T R V V RVL VPES N GW AR G L PI VNGWQQ W Sbjct 1191 AVTRPTVDRWDQTDRLVHVDAGGVDRVLFVPESTNPGWHARVD-GRELAPIVVNGWQQGW 1249 Query 1238 VVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFW-RTGR 1281 +VPAG GT+ LTF ++ YR ++ +GLAL+ +L +AFW R G+ Sbjct 1250 IVPAGTAGTVALTFDLDTPYRWAIGVGLALVVVLFAVAFWPRRGK 1294 >gi|254820650|ref|ZP_05225651.1| hypothetical protein MintA_12016 [Mycobacterium intracellulare ATCC 13950] Length=615 Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/615 (83%), Positives = 555/615 (91%), Gaps = 3/615 (0%) Query 4 LSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLARATNLWNSDLPFGQAQNQ 63 +SR+WL +VGA+ALALTFAQSPG++SPDTKLDLTANPLRFLARATNLWNS+LPFGQAQNQ Sbjct 1 MSRRWLWLVGAIALALTFAQSPGRISPDTKLDLTANPLRFLARATNLWNSELPFGQAQNQ 60 Query 64 AYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGLLRVAEALGVGGPSSRVVGA 123 AYGYLFPHGTFF+IGH LGVPGW+TQRLWWA+LLT GFWGL+RVAEAL +G P+SRV+ A Sbjct 61 AYGYLFPHGTFFLIGHALGVPGWITQRLWWALLLTAGFWGLMRVAEALRIGSPASRVIAA 120 Query 124 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGTSGRSVRALAAQAGLAVALMG 183 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALR ++ RSVRALAA+AGLAVALMG Sbjct 121 VAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRASTDRSVRALAARAGLAVALMG 180 Query 184 AVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMALATLWWVMALTQLHGVSPPFL 243 AVNAIATLAGCLPAVIWWACHRPNR WWRYT WWLLA+ LATLWWV+AL L +SPPFL Sbjct 181 AVNAIATLAGCLPAVIWWACHRPNRRWWRYTGWWLLALLLATLWWVVALVMLRAISPPFL 240 Query 244 DFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAPLVTGSAAILGTCLVAAAGLAGL 303 DFIESSGVTTQWSSL E+LRGTDSWTP+VAPNATAGAPLVTGSAAILGTCLVAAAGLAGL Sbjct 241 DFIESSGVTTQWSSLTEMLRGTDSWTPYVAPNATAGAPLVTGSAAILGTCLVAAAGLAGL 300 Query 304 TSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHPVQAFLDAAGTPLRNVHKVGPVIR 363 S AMPARGRLVTMLLVG VL+AVG+ GGL SPVAH VQAFLDA G PLRNVHK+G VI Sbjct 301 ASAAMPARGRLVTMLLVGAVLMAVGYSGGLGSPVAHAVQAFLDAGGAPLRNVHKLGSVIG 360 Query 364 LPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDKRVAVAVVALTALMVSTSLAWTGRV 423 +P+ LG+A LL R+PLPG+AP P WLRAFAHPERD+RVA A+V LTALMVSTSLAWTGR+ Sbjct 361 IPVALGIAHLLGRIPLPGAAPTPVWLRAFAHPERDRRVAAAMVVLTALMVSTSLAWTGRL 420 Query 424 APPGTFGALPQYWQEAADWLRTHHAATPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGDG 483 APPGTF A+P YW EAADWL H+ PTPGRVLVVPGAPFATQVWGTSHDEPLQVLG Sbjct 421 APPGTFTAIPPYWHEAADWLTEHNTGAPTPGRVLVVPGAPFATQVWGTSHDEPLQVLGSS 480 Query 484 PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYVLVRNDLDPETSRS 543 PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISY+ VRNDLDP+TSRS Sbjct 481 PWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAGLADTLARQGISYLAVRNDLDPDTSRS 540 Query 544 ARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAGFVNDSGLRPRYPAIEIYRVSAP---AN 600 ARPIL+HR++ GSPGL K+A+FGAPVGP L+GFV DSGLRPRYPA+EIYRV+ ++ Sbjct 541 ARPILVHRAVDGSPGLRKVAQFGAPVGPGTLSGFVADSGLRPRYPAVEIYRVTGGGDVSD 600 Query 601 PGAPYFAATDQLARV 615 P PY D+LARV Sbjct 601 PATPYLVDADRLARV 615 >gi|254820590|ref|ZP_05225591.1| hypothetical protein MintA_11716 [Mycobacterium intracellulare ATCC 13950] Length=635 Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 499/635 (79%), Positives = 539/635 (85%), Gaps = 3/635 (0%) Query 667 TDYGRVDHHSSAIRAPGDARHTYNRVPDYPVPGAEPVVGGWTGGRITVSSSSADATAMPD 726 TDYGRVD HSSAIRAPGDARHTYNRVPDYPVPGAEPV G WTGGRITVSSSS+D+TAMPD Sbjct 1 TDYGRVDQHSSAIRAPGDARHTYNRVPDYPVPGAEPVAGAWTGGRITVSSSSSDSTAMPD 60 Query 727 VAPASAPAAAVDGDPATAWVSNALQAAVGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRR 786 VAPA++PAAA+DGD ATAWVSN+LQAAVGQW+++DFD PVTNA +TLTPSATAVGAQVRR Sbjct 61 VAPATSPAAAIDGDSATAWVSNSLQAAVGQWMRIDFDHPVTNAAITLTPSATAVGAQVRR 120 Query 787 ILIETVNGSTTLRFDEAGKPLTAALPYGETPWVRFTAAATDDGSAGVQFGITDLAITQYD 846 ILIET GSTTLRFDE GKPL AALPYGETPWVR TAA TDDGSAGVQFGITDL ITQYD Sbjct 121 ILIETATGSTTLRFDEPGKPLAAALPYGETPWVRITAAGTDDGSAGVQFGITDLTITQYD 180 Query 847 ASGFAHPVQLRHTVLVPGPPPGSAIAGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEP 906 ASGFAH V LRHTV VPGPPPG+ IAGWDLGSELLGRPGCAP PD VRCA SMAL PEEP Sbjct 181 ASGFAHQVDLRHTVRVPGPPPGAPIAGWDLGSELLGRPGCAPAPDTVRCAPSMALTPEEP 240 Query 907 ANLSRTLTVPRPVSVTPMVWVRPRQGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADG 966 N SRTLTVP PV VTP VWVRPRQGPKLA LIA P+ T A GDSD VD+LGSAYA DG Sbjct 241 VNFSRTLTVPAPVLVTPTVWVRPRQGPKLAALIAEPNATVAQGDSDAVDVLGSAYAGTDG 300 Query 967 DPATAWTAPQRVVQHKTPPTLTLTLPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQV 1026 DPATAWTAPQRVVQHKTPPTLTL LPRPT VTGLRL SR+ LP PT+VA+NLGDGPQV Sbjct 301 DPATAWTAPQRVVQHKTPPTLTLRLPRPTEVTGLRLVPSRAALPVRPTMVAVNLGDGPQV 360 Query 1027 RQLQV--GELTTLWLHPRVTDTVSVSLLDWDDVIDRNALGFDQLKPPGLAEVVVLSAGGA 1084 ++ G TL L PRVTDTV++SLLDWDDVIDRNALGFDQLKPPGLAEV L A G Sbjct 361 AAVKADSGGAQTLALKPRVTDTVTLSLLDWDDVIDRNALGFDQLKPPGLAEVAALGADGN 420 Query 1085 PIAPADAARNRARALTVDCDHGPVVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIA 1144 IAPADAARNR R +++ CD GPV+AVAGRFVHT+I TTVGA+LD +P+AA+PC+R+PIA Sbjct 421 AIAPADAARNRGREISLGCDRGPVIAVAGRFVHTAIHTTVGAILDDQPLAAVPCDRDPIA 480 Query 1145 LPAGQQELLISPGAAFVVDGAQLSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRV 1204 LPAG QELLISPGA FVVDGAQLST A S+ + AWGP REV+ P SAT RV Sbjct 481 LPAGDQELLISPGAQFVVDGAQLSTSRAPESARAERLSSWRAWGPARREVQAPPSATPRV 540 Query 1205 LVVPESINSGWVARTSTGARLTPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIG 1264 +V+PESIN GWVART +GARLTPIAVNGWQQ WVVPAG+PGTITLTFA N LY A L +G Sbjct 541 MVIPESINPGWVARTGSGARLTPIAVNGWQQGWVVPAGDPGTITLTFASNPLYGAGLVVG 600 Query 1265 LALLPLLALLAFWRTGRRQLADRPTPPWRPGAWAA 1299 LALLPLLALLAFWRT R + A PT PWRPGAWAA Sbjct 601 LALLPLLALLAFWRT-RTRDAGAPTQPWRPGAWAA 634 Lambda K H 0.319 0.134 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3603510436298 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40