BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0248c Length=646 Score E Sequences producing significant alignments: (Bits) Value gi|15607389|ref|NP_214762.1| succinate dehydrogenase flavoprotei... 1335 0.0 gi|289756314|ref|ZP_06515692.1| LOW QUALITY PROTEIN: succinate d... 1251 0.0 gi|240168472|ref|ZP_04747131.1| succinate dehydrogenase flavopro... 1197 0.0 gi|183980539|ref|YP_001848830.1| succinate dehydrogenase (iron-s... 1187 0.0 gi|118616890|ref|YP_905222.1| succinate dehydrogenase flavoprote... 1184 0.0 gi|296167530|ref|ZP_06849882.1| succinate dehydrogenase [Mycobac... 1156 0.0 gi|41409796|ref|NP_962632.1| succinate dehydrogenase flavoprotei... 1144 0.0 gi|118465120|ref|YP_884030.1| succinate dehydrogenase flavoprote... 1139 0.0 gi|342859276|ref|ZP_08715930.1| succinate dehydrogenase flavopro... 1135 0.0 gi|333988875|ref|YP_004521489.1| succinate dehydrogenase (iron-s... 1095 0.0 gi|169631497|ref|YP_001705146.1| succinate dehydrogenase flavopr... 1079 0.0 gi|126432856|ref|YP_001068547.1| succinate dehydrogenase flavopr... 1066 0.0 gi|108797233|ref|YP_637430.1| succinate dehydrogenase flavoprote... 1065 0.0 gi|257056751|ref|YP_003134583.1| succinate dehydrogenase flavopr... 1062 0.0 gi|300784260|ref|YP_003764551.1| succinate dehydrogenase flavopr... 1056 0.0 gi|118468903|ref|YP_884831.1| succinate dehydrogenase flavoprote... 1055 0.0 gi|54027576|ref|YP_121818.1| succinate dehydrogenase flavoprotei... 1053 0.0 gi|226360190|ref|YP_002777968.1| succinate dehydrogenase flavopr... 1044 0.0 gi|312140082|ref|YP_004007418.1| succinate dehydrogenase flavopr... 1044 0.0 gi|254820422|ref|ZP_05225423.1| succinate dehydrogenase flavopro... 1041 0.0 gi|111018062|ref|YP_701034.1| succinate dehydrogenase flavoprote... 1040 0.0 gi|145220998|ref|YP_001131676.1| succinate dehydrogenase flavopr... 1038 0.0 gi|302525502|ref|ZP_07277844.1| succinate dehydrogenase, flavopr... 1038 0.0 gi|325674441|ref|ZP_08154129.1| succinate dehydrogenase flavopro... 1035 0.0 gi|343927512|ref|ZP_08766983.1| putative succinate dehydrogenase... 1032 0.0 gi|120401310|ref|YP_951139.1| succinate dehydrogenase flavoprote... 1017 0.0 gi|334337180|ref|YP_004542332.1| succinate dehydrogenase (ubiqui... 974 0.0 gi|134097762|ref|YP_001103423.1| succinate dehydrogenase flavopr... 974 0.0 gi|229822043|ref|YP_002883569.1| succinate dehydrogenase flavopr... 972 0.0 gi|269957001|ref|YP_003326790.1| Succinate dehydrogenase [Xylani... 964 0.0 gi|284033413|ref|YP_003383344.1| L-aspartate oxidase [Kribbella ... 956 0.0 gi|256375564|ref|YP_003099224.1| succinate dehydrogenase flavopr... 940 0.0 gi|331698356|ref|YP_004334595.1| succinate dehydrogenase (ubiqui... 927 0.0 gi|324997711|ref|ZP_08118823.1| succinate dehydrogenase flavopro... 920 0.0 gi|337767941|emb|CCB76654.1| Succinate dehydrogenase flavoprotei... 919 0.0 gi|345009078|ref|YP_004811432.1| fumarate reductase/succinate de... 914 0.0 gi|297192295|ref|ZP_06909693.1| succinate dehydrogenase flavopro... 903 0.0 gi|297157548|gb|ADI07260.1| succinate dehydrogenase flavoprotein... 900 0.0 gi|290957635|ref|YP_003488817.1| succinate dehydrogenase flavopr... 898 0.0 gi|269125369|ref|YP_003298739.1| fumarate reductase/succinate de... 896 0.0 gi|258654151|ref|YP_003203307.1| succinate dehydrogenase flavopr... 890 0.0 gi|302542784|ref|ZP_07295126.1| putative FAD flavoprotein oxidas... 885 0.0 gi|238060961|ref|ZP_04605670.1| succinate dehydrogenase flavopro... 885 0.0 gi|330470012|ref|YP_004407755.1| succinate dehydrogenase flavopr... 882 0.0 gi|296271006|ref|YP_003653638.1| succinate dehydrogenase [Thermo... 882 0.0 gi|302558614|ref|ZP_07310956.1| FAD flavoprotein oxidase [Strept... 880 0.0 gi|29829723|ref|NP_824357.1| succinate dehydrogenase flavoprotei... 880 0.0 gi|159039678|ref|YP_001538931.1| succinate dehydrogenase flavopr... 879 0.0 gi|291437477|ref|ZP_06576867.1| succinate dehydrogenase flavopro... 876 0.0 gi|145596280|ref|YP_001160577.1| succinate dehydrogenase flavopr... 874 0.0 >gi|15607389|ref|NP_214762.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium tuberculosis H37Rv] gi|15839629|ref|NP_334666.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium tuberculosis CDC1551] gi|31791426|ref|NP_853919.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=646 Score = 1335 bits (3455), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/646 (100%), Positives = 646/646 (100%), Gaps = 0/646 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN Sbjct 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL Sbjct 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR Sbjct 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG Sbjct 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS Sbjct 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG Sbjct 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG Sbjct 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 >gi|289756314|ref|ZP_06515692.1| LOW QUALITY PROTEIN: succinate dehydrogenase flavoprotein subunit [Mycobacterium tuberculosis EAS054] gi|289696901|gb|EFD64330.1| LOW QUALITY PROTEIN: succinate dehydrogenase flavoprotein subunit [Mycobacterium tuberculosis EAS054] Length=646 Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 606/618 (99%), Positives = 607/618 (99%), Gaps = 0/618 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN Sbjct 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL Sbjct 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR Sbjct 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG Sbjct 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS Sbjct 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG Sbjct 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 Query 601 DSNCHINVTQQLQTPMRP 618 DSNC + P P Sbjct 601 DSNCTSTSPSSCKRPCDP 618 >gi|240168472|ref|ZP_04747131.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium kansasii ATCC 12478] Length=644 Score = 1197 bits (3097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/651 (90%), Positives = 604/651 (93%), Gaps = 14/651 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDR DG+ISQRN Sbjct 61 TNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED+AELGDYEARI+VFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAELGDYEARIRVFAECTITELLKD 180 Query 181 ----QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRA 236 + IAGAFGYWRESGRFI+FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRA Sbjct 181 GPEHEERIAGAFGYWRESGRFILFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRA 240 Query 237 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQY 296 GA+LINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQY Sbjct 241 GASLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQY 300 Query 297 AETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAE 356 AE+E+EADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTP E Sbjct 301 AESEQEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPEE 360 Query 357 IKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAG 416 IKRRLPSMYHQF ELA VDIT + MEVGPTCHYVMGGVEVDADTGAATVPGLFAAGEC+G Sbjct 361 IKRRLPSMYHQFMELAGVDITKEPMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECSG 420 Query 417 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPK 476 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRP +S+EA+DAAA+QAL PFEGP Sbjct 421 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTISSEAVDAAAKQALKPFEGPT 480 Query 477 DGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPG 536 DGSAPENPYAL MDLQ+VMNDLVGIIR DEI+RALTLL ELW RY V VEGHRQYNP Sbjct 481 DGSAPENPYALQMDLQHVMNDLVGIIRKEDEITRALTLLDELWKRYQKVQVEGHRQYNPA 540 Query 537 WNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGG 596 WNL+IDLRNMLLVSECVARAAL+RTESRGGHTRDDHPGMD NWR LLVCRA Sbjct 541 WNLAIDLRNMLLVSECVARAALERTESRGGHTRDDHPGMDSNWRNTLLVCRA-------- 592 Query 597 SGSGDSNC--HINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 +G GDS HI +T Q Q PMR DLLELFEISELEKYYTDEELA+HPGRR Sbjct 593 AGDGDSTVGPHIAITHQSQVPMRSDLLELFEISELEKYYTDEELADHPGRR 643 >gi|183980539|ref|YP_001848830.1| succinate dehydrogenase (iron-sulfur subunit), SdhA_1 [Mycobacterium marinum M] gi|183173865|gb|ACC38975.1| succinate dehydrogenase (iron-sulfur subunit), SdhA_1 [Mycobacterium marinum M] Length=642 Score = 1187 bits (3071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/649 (89%), Positives = 606/649 (94%), Gaps = 12/649 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 +NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDR DG+ISQRN Sbjct 61 SNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED AE+GDYEARIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAEVGDYEARIKVFAECTITELLKD 180 Query 181 Q----GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRA 236 G IAGAFGYWRESGRFI+FEAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALALRA Sbjct 181 GPENGGRIAGAFGYWRESGRFILFEAPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRA 240 Query 237 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQY 296 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS++ RFMF YIPPVFKGQY Sbjct 241 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDDDRFMFGYIPPVFKGQY 300 Query 297 AETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAE 356 AET EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTP E Sbjct 301 AETAEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPEE 360 Query 357 IKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAG 416 IKRRLPSMYHQF ELA VDIT + MEVGPTCHYVMGG+EVDADTGAATVPGLFAAGEC+G Sbjct 361 IKRRLPSMYHQFMELAGVDITKEPMEVGPTCHYVMGGIEVDADTGAATVPGLFAAGECSG 420 Query 417 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPK 476 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRP VS E++DAAA+ AL+PFEGP Sbjct 421 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTVSPESVDAAARLALAPFEGPT 480 Query 477 DGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPG 536 DG+APENPYAL MDLQ++MNDLVGIIRNADEIS+ALTLL ELW+RY +V VEGHRQYNPG Sbjct 481 DGTAPENPYALQMDLQFLMNDLVGIIRNADEISKALTLLRELWARYEHVQVEGHRQYNPG 540 Query 537 WNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGG 596 WNL+ID+RNML VSECVARAAL+RTESRGGHTRDDHPGMDPNWR +LLVCRA + T G Sbjct 541 WNLAIDMRNMLTVSECVARAALERTESRGGHTRDDHPGMDPNWRNVLLVCRAAQE-ATDG 599 Query 597 SGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 S HI +T+Q Q PMRPDLL+LF+ISELEKYYT EELA+HPGRR Sbjct 600 S-------HITITRQPQVPMRPDLLDLFQISELEKYYTAEELADHPGRR 641 >gi|118616890|ref|YP_905222.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium ulcerans Agy99] gi|118569000|gb|ABL03751.1| succinate dehydrogenase (iron-sulfur subunit), SdhA_1 [Mycobacterium ulcerans Agy99] Length=642 Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 573/649 (89%), Positives = 604/649 (94%), Gaps = 12/649 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDR DG+ISQRN Sbjct 61 NNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED AE+GDYEARIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAEVGDYEARIKVFAECTITELLKD 180 Query 181 Q----GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRA 236 G IAGAFGYWRESGRFI+FEAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALALRA Sbjct 181 GPENGGRIAGAFGYWRESGRFILFEAPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRA 240 Query 237 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQY 296 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS++ RFMF YIPPVFK QY Sbjct 241 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDDDRFMFGYIPPVFKSQY 300 Query 297 AETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAE 356 AET EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTP E Sbjct 301 AETAEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPEE 360 Query 357 IKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAG 416 IKRRLPSMYHQF ELA VDIT + MEVGPTCHYVMGG+EVDADTGAATVPGLFAAGEC+G Sbjct 361 IKRRLPSMYHQFMELAGVDITKEPMEVGPTCHYVMGGIEVDADTGAATVPGLFAAGECSG 420 Query 417 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPK 476 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRP VS E++DAAA+ AL+PFEGP Sbjct 421 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTVSPESVDAAARLALAPFEGPT 480 Query 477 DGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPG 536 DG+APENPYAL MDLQ++MNDLVGIIRNADEIS+ALTLL ELW+RY +V VEGHRQYNPG Sbjct 481 DGTAPENPYALQMDLQFLMNDLVGIIRNADEISKALTLLRELWARYEHVQVEGHRQYNPG 540 Query 537 WNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGG 596 WNL+ID+RNML VSECVARAAL+RTESRGGHTRDDHPGMDPNWR +LLVCRA + T G Sbjct 541 WNLAIDMRNMLTVSECVARAALERTESRGGHTRDDHPGMDPNWRNVLLVCRAAQE-ATDG 599 Query 597 SGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 S HI +T+Q Q PMRPDLL+LF+ISELEKYYT EELA+HPGRR Sbjct 600 S-------HITITRQPQVPMRPDLLDLFQISELEKYYTAEELADHPGRR 641 >gi|296167530|ref|ZP_06849882.1| succinate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897152|gb|EFG76761.1| succinate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=638 Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 554/646 (86%), Positives = 598/646 (93%), Gaps = 8/646 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERH+YDV+VIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MVEVERHAYDVIVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDR +DG+ISQRN Sbjct 61 TNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLEDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED+AELGDYEARIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAELGDYEARIKVFAECTITELLKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 AIAGAFGYWRE+G+F++FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA+L Sbjct 181 GDAIAGAFGYWRETGQFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGASL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ RFMFDYIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGKRFMFDYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 +EADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRG+PHGGV+LDIASRLTP EIKRR Sbjct 301 QEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRLTPEEIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA VDIT + MEVGPTCHYVMGGVEVDADTGAATVPGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELAGVDITKEPMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSA+A++ AA++ALSPF+GP DG+ Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSADAVETAAKRALSPFDGPTDGAP 480 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY L ++LQ MNDLVGIIR ADE++ ALT L +L R+ N+ VEG R YNPGWNL+ Sbjct 481 AENPYTLQLELQQSMNDLVGIIRKADEVAEALTRLDKLRERFKNMHVEGGRHYNPGWNLA 540 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 IDLRNMLLVSECVA+AAL+RTESRGGHTRDDHP MD WR++LLVCRA +G Sbjct 541 IDLRNMLLVSECVAKAALERTESRGGHTRDDHPAMDSGWRKVLLVCRA--------AGGD 592 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 + I++T + Q PMRPDLLELFEISELEKYYTD+ELAEHPGRRG Sbjct 593 EVIPDISITHKDQVPMRPDLLELFEISELEKYYTDDELAEHPGRRG 638 >gi|41409796|ref|NP_962632.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398628|gb|AAS06248.1| hypothetical protein MAP_3698c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460118|gb|EGO39024.1| succinate dehydrogenase/fumarate reductase flavoprotein subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=647 Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/644 (86%), Positives = 589/644 (92%), Gaps = 3/644 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERH+YDVVVIGAGGAGLRAVIEARERGL+VAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MVEVERHAYDVVVIGAGGAGLRAVIEARERGLRVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDR DG+ISQRN Sbjct 61 TNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED+AELGDYEARIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAELGDYEARIKVFAECTITELLKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 AIAGAFGYWRESG+F++FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA+L Sbjct 181 GDAIAGAFGYWRESGQFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGASL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSE RFMFDYIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 +EADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRG+PHGGV+LDIASRLTPAEI RR Sbjct 301 QEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRLTPAEINRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA VDIT + MEVGPTCHYVMGGVEVDADTGAATVPGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELAGVDITKEPMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRP + A++AAA++ALSPFE P G Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTIGESAVEAAAKRALSPFEAPAGGGP 480 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY L ++LQ MNDLVGIIRNADEIS AL L +L R+ N+ VEG R+YNPGWNL+ Sbjct 481 GENPYTLQLELQQSMNDLVGIIRNADEISEALARLDKLRERFKNLHVEGQRRYNPGWNLA 540 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 IDLRNMLLVSECVA+AALQRTESRGGHTRDDHP MD +WR++LLVC E + G Sbjct 541 IDLRNMLLVSECVAKAALQRTESRGGHTRDDHPSMDSSWRKLLLVC---EAVAEPGDVEA 597 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGR 644 I +T++ QTPMRPDLLELF+I+ELEKYYTDEELA HPGR Sbjct 598 AVIPDITITKKEQTPMRPDLLELFDIAELEKYYTDEELAGHPGR 641 >gi|118465120|ref|YP_884030.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium avium 104] gi|254777348|ref|ZP_05218864.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium avium subsp. avium ATCC 25291] gi|118166407|gb|ABK67304.1| succinate dehydrogenase [Mycobacterium avium 104] Length=646 Score = 1139 bits (2947), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/644 (86%), Positives = 593/644 (93%), Gaps = 9/644 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERH+YDVVVIGAGGAGLRAVIEARERGL+VAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MVEVERHAYDVVVIGAGGAGLRAVIEARERGLRVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDR DG+ISQRN Sbjct 61 TNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED+AELGDYEARIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAELGDYEARIKVFAECTITELLKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 AIAGAFGYWRESG+F++FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA+L Sbjct 181 GDAIAGAFGYWRESGQFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGASL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSE RFMFDYIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 +EADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRG+PHGGV+LDIASRLTPAEI RR Sbjct 301 QEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRLTPAEINRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA VDIT + MEVGPTCHYVMGGVEVDADTGAATVPGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELAGVDITKEPMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRP +S +A++AAA++AL+PFE P G+A Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTISPDAVEAAAKRALAPFEAPAGGTA 480 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY L ++LQ MNDLVGIIRNADEIS AL L +L R+ N+ V+G R+YNPGWNL+ Sbjct 481 -ENPYTLQLELQQSMNDLVGIIRNADEISEALARLGKLRERFKNLHVDGQRRYNPGWNLA 539 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DLRNMLLVSECVA+AAL+RTESRGGHTRDDHP MD WR++LLVC A +G Sbjct 540 LDLRNMLLVSECVAKAALERTESRGGHTRDDHPSMDSAWRKVLLVCEA--------AGGD 591 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGR 644 + I++ ++ QTPMRPDLLELF+I+ELEKYYTDEELA HPGR Sbjct 592 EVIPDISIRKKDQTPMRPDLLELFDIAELEKYYTDEELAGHPGR 635 >gi|342859276|ref|ZP_08715930.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium colombiense CECT 3035] gi|342133517|gb|EGT86720.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium colombiense CECT 3035] Length=638 Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/646 (85%), Positives = 589/646 (92%), Gaps = 9/646 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVE+ERH+YDVVVIGAGGAGLRAVIEARERGL+VAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MVEIERHTYDVVVIGAGGAGLRAVIEARERGLRVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDR DG+ISQRN Sbjct 61 TNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQEDHAELGDYEARI+VFAE TITEL+KD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDHAELGDYEARIRVFAETTITELIKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 AIAGAFGY RESG FI+FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA+L Sbjct 181 GDAIAGAFGYIRESGNFILFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGASL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ RFMFDYIP VFKGQYAE+E Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGKRFMFDYIPSVFKGQYAESE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 +EADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRG+PHGGV+LDIASRLTPAEI RR Sbjct 301 QEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRLTPAEINRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA VDIT + MEVGPTCHYVMGGVEVDADTGAATVPGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELAGVDITKEPMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRP V+ A+DAAA++ALSPFE P G+ Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTVAEGALDAAAKRALSPFEAPASGT- 479 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 PENPY L ++LQ MNDLVGIIRNADE++ AL L +L R+ N+ VEG R+YNPGWNL+ Sbjct 480 PENPYTLQLELQQSMNDLVGIIRNADEVAEALARLDKLRERFKNLHVEGQRRYNPGWNLA 539 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 IDLRNMLLVSECVA+AALQRTESRGGHTRDDHP MD +WR++LLVC A +G Sbjct 540 IDLRNMLLVSECVAKAALQRTESRGGHTRDDHPAMDSSWRKVLLVCEA--------AGGD 591 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 + I +T++ QTPMRPDLLELFEI ELEKYYTDEELA HPGR G Sbjct 592 EVIPDITITKKEQTPMRPDLLELFEIGELEKYYTDEELAGHPGRSG 637 >gi|333988875|ref|YP_004521489.1| succinate dehydrogenase (iron-sulfur subunit) SdhA_1 [Mycobacterium sp. JDM601] gi|333484843|gb|AEF34235.1| succinate dehydrogenase (iron-sulfur subunit) SdhA_1 [Mycobacterium sp. JDM601] Length=640 Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/651 (82%), Positives = 575/651 (89%), Gaps = 18/651 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVEVERHSYDVVVIGAGGAGLRAVIEAR++GL VAVVCKSLFGKAHTVMAEGG AA+MGN Sbjct 1 MVEVERHSYDVVVIGAGGAGLRAVIEARQQGLSVAVVCKSLFGKAHTVMAEGGAAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N KDNW+ HFGDTMRGGKFLNNWRMAELHA+EAP+RVWELETYGALFDRT DG+I+QRN Sbjct 61 VNDKDNWQVHFGDTMRGGKFLNNWRMAELHAREAPERVWELETYGALFDRTKDGKINQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLE+IRTLQQKVVSLQQ+DHAE GDYEA+IKVF ECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLEMIRTLQQKVVSLQQDDHAEFGDYEAKIKVFHECTITELLKD 180 Query 181 Q-----GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALR 235 G I+GAFGYWRESG+FIVFE PAVVLATGGIGKSFKVTSNSWEYTGDGHALALR Sbjct 181 SKDGAAGRISGAFGYWRESGKFIVFETPAVVLATGGIGKSFKVTSNSWEYTGDGHALALR 240 Query 236 AGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQ 295 AGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ +RFMFDYIPPVFKGQ Sbjct 241 AGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGTRFMFDYIPPVFKGQ 300 Query 296 YAETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPA 355 YAETE+EADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRG+PHGGV+LDIASRL P Sbjct 301 YAETEQEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRLKPE 360 Query 356 EIKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECA 415 EIKRRLPSMYHQF +LAEVDIT AMEVGPTCHYVMGG+EVD DT AA VPGLFAAGECA Sbjct 361 EIKRRLPSMYHQFMQLAEVDITKDAMEVGPTCHYVMGGIEVDPDTAAAAVPGLFAAGECA 420 Query 416 GGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGP 475 GGMHGSNRLGGNSLSDLLVFGRRAGLGAA+YVR L+SRPAV+ A++ AA+ AL+P + P Sbjct 421 GGMHGSNRLGGNSLSDLLVFGRRAGLGAAEYVRGLASRPAVAPAALETAAKLALAPLDRP 480 Query 476 KDGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNP 535 G A ENPY LH +LQ MNDLVGIIRNA E+ +A+ L E +R+ V VEG R YNP Sbjct 481 --GGAGENPYTLHAELQQSMNDLVGIIRNAGELEQAVARLEEFKTRFATVAVEGGRHYNP 538 Query 536 GWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTG 595 GW+L++DLRNMLLVSECVA+AALQRTESRGGHTRDDHPGMD NWR+ LLVCR Sbjct 539 GWHLAVDLRNMLLVSECVAKAALQRTESRGGHTRDDHPGMDSNWRKTLLVCRV------- 591 Query 596 GSGSGDSNC-HINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 + DS I +T + QT MR DLLELFEISELEKYYTDEELA HPGRR Sbjct 592 ---ANDSEVPDITITPEAQTAMREDLLELFEISELEKYYTDEELAHHPGRR 639 >gi|169631497|ref|YP_001705146.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium abscessus ATCC 19977] gi|169243464|emb|CAM64492.1| Putative succinate dehydrogenase, flavoprotein subunit [Mycobacterium abscessus] Length=641 Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/649 (81%), Positives = 566/649 (88%), Gaps = 13/649 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E+ERH YDVVVIGAGGAGLRAVIEARE+G KVAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MAELERHQYDVVVIGAGGAGLRAVIEAREQGFKVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KD+W+ HFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT DGRISQRN Sbjct 61 ANDKDSWQIHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTKDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLE+IRT+QQK+VSLQQED AE GDYEARIK+FAECTIT+LL D Sbjct 121 FGGHTYPRLAHVGDRTGLEIIRTMQQKIVSLQQEDFAETGDYEARIKIFAECTITDLLLD 180 Query 181 Q----GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRA 236 I+GAFGYWRESGRFI+FEAPAVVLATGGIGKSFKV+SNSWEYTGDGHALALRA Sbjct 181 STDGVSRISGAFGYWRESGRFILFEAPAVVLATGGIGKSFKVSSNSWEYTGDGHALALRA 240 Query 237 GATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQY 296 G TLINMEF+QFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSE RFMFDYIP VFKGQY Sbjct 241 GGTLINMEFIQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPSVFKGQY 300 Query 297 AETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAE 356 AETEEEADQWLKDNDSARRTPDLLPRDEVARAIN+EVKAGRGTPHGGVYLDIASR+ E Sbjct 301 AETEEEADQWLKDNDSARRTPDLLPRDEVARAINAEVKAGRGTPHGGVYLDIASRIPTEE 360 Query 357 IKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAG 416 IK+RLPSMYHQFKELAEVDIT MEVGPTCHYVMGG+EVD D+GAATVPGLFAAGEC+G Sbjct 361 IKKRLPSMYHQFKELAEVDITKDDMEVGPTCHYVMGGIEVDPDSGAATVPGLFAAGECSG 420 Query 417 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPK 476 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYV++L+SRP ++ +D AA AL+PF P Sbjct 421 GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVKSLTSRPQITEADVDKAAALALAPFGDPA 480 Query 477 DGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPG 536 A ENPY LH DLQ MNDLVGIIR +E+ +AL L EL R+ +V VEGHRQ+NPG Sbjct 481 AAGA-ENPYTLHTDLQQAMNDLVGIIRKEEEVEQALVKLNELKERFKHVAVEGHRQFNPG 539 Query 537 WNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGG 596 W+L+ID+RNMLLVSECVA+AAL RTESRGGHTRDDHP MD WR+ LLVC T Sbjct 540 WHLAIDMRNMLLVSECVAKAALLRTESRGGHTRDDHPNMDATWRKTLLVCSTT------- 592 Query 597 SGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 G + + VT + Q P+RPDLL LFEI ELEKY+T EELAEHPGR+ Sbjct 593 -GGDPAVPDVLVTPEPQLPLRPDLLALFEIGELEKYFTPEELAEHPGRK 640 >gi|126432856|ref|YP_001068547.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium sp. JLS] gi|126232656|gb|ABN96056.1| succinate dehydrogenase subunit A [Mycobacterium sp. JLS] Length=648 Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/643 (82%), Positives = 568/643 (89%), Gaps = 9/643 (1%) Query 4 VERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANP 63 +ERH YDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAA+MGN NP Sbjct 14 IERHQYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAASMGNTNP 73 Query 64 KDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGG 123 KDNW+ HFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT DGRISQRNFGG Sbjct 74 KDNWQVHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGG 133 Query 124 HTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGA 183 HTYPRLAHVGDRTGLE+IRT+QQK+VSLQQED ELGDYEARI+VFAECT+T+L+KD Sbjct 134 HTYPRLAHVGDRTGLEIIRTMQQKIVSLQQEDKEELGDYEARIRVFAECTVTDLIKDGDR 193 Query 184 IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINM 243 IAGAFGYWRESG FI+F+APAVVLATGGIGKS+KVTSNSWEYTGDGHALALRAGATLINM Sbjct 194 IAGAFGYWRESGSFILFDAPAVVLATGGIGKSYKVTSNSWEYTGDGHALALRAGATLINM 253 Query 244 EFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEA 303 EF+QFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ RFMFDYIP VFKGQYAE+E+EA Sbjct 254 EFIQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGKRFMFDYIPDVFKGQYAESEDEA 313 Query 304 DQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPS 363 DQWLKDNDSARRTPDLLPRDEVARAIN+EVK GRGTPHGGVYLDIASR++ EIKRRLPS Sbjct 314 DQWLKDNDSARRTPDLLPRDEVARAINTEVKEGRGTPHGGVYLDIASRMSSEEIKRRLPS 373 Query 364 MYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHGSNR 423 MYHQF ELAEVDITT MEVGPTCHYVMGG+EVD DTGAA PGLFAAGECAGGMHGSNR Sbjct 374 MYHQFMELAEVDITTDEMEVGPTCHYVMGGIEVDPDTGAAKTPGLFAAGECAGGMHGSNR 433 Query 424 LGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAPEN 483 LGGNSLSDLLVFGRRAGLGA+DYVRAL +RP VS EA++AA + AL+PF+GP DG PEN Sbjct 434 LGGNSLSDLLVFGRRAGLGASDYVRALGNRPTVSEEAVEAARKLALAPFDGPSDGQ-PEN 492 Query 484 PYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSIDL 543 PY + +DLQ MN+LVGIIR ADEI A L EL R+ + VEG+R +NPGW+L+IDL Sbjct 493 PYTMQLDLQDTMNELVGIIRKADEIIEAQGKLDELRDRFKRMKVEGNRHFNPGWHLAIDL 552 Query 544 RNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGDSN 603 RNMLLVSECVA+AAL+RTESRGGHTRDD+P M+ WRR LLVCRA G Sbjct 553 RNMLLVSECVAKAALERTESRGGHTRDDYPSMEAEWRRTLLVCRA--------QGDDVVV 604 Query 604 CHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 + VT++ Q PMR DLLEL +I EL+KYYTDEELA HP RRG Sbjct 605 PSVTVTREDQVPMRDDLLELLDIEELQKYYTDEELANHPARRG 647 >gi|108797233|ref|YP_637430.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium sp. MCS] gi|119866318|ref|YP_936270.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium sp. KMS] gi|108767652|gb|ABG06374.1| succinate dehydrogenase subunit A [Mycobacterium sp. MCS] gi|119692407|gb|ABL89480.1| succinate dehydrogenase subunit A [Mycobacterium sp. KMS] Length=648 Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/643 (82%), Positives = 568/643 (89%), Gaps = 9/643 (1%) Query 4 VERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANP 63 +ERH YDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAA+MGN NP Sbjct 14 IERHQYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAASMGNTNP 73 Query 64 KDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGG 123 KDNW+ HFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT DGRISQRNFGG Sbjct 74 KDNWQVHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGG 133 Query 124 HTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGA 183 HTYPRLAHVGDRTGLE+IRT+QQK+VSLQQED ELGDYEARI+VFAECT+T+L+KD Sbjct 134 HTYPRLAHVGDRTGLEIIRTMQQKIVSLQQEDKEELGDYEARIRVFAECTVTDLIKDGDR 193 Query 184 IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINM 243 IAGAFGYWRESG FI+F+APAVVLATGGIGKS+KVTSNSWEYTGDGHALALRAGATLINM Sbjct 194 IAGAFGYWRESGSFILFDAPAVVLATGGIGKSYKVTSNSWEYTGDGHALALRAGATLINM 253 Query 244 EFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEA 303 EF+QFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ RFMFDYIP VFKGQYAE+E+EA Sbjct 254 EFIQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGKRFMFDYIPDVFKGQYAESEDEA 313 Query 304 DQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPS 363 DQWLKDNDSARRTPDLLPRDEVARAIN+EVK GRGTPHGGVYLDIASR++ EIKRRLPS Sbjct 314 DQWLKDNDSARRTPDLLPRDEVARAINTEVKEGRGTPHGGVYLDIASRMSSEEIKRRLPS 373 Query 364 MYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHGSNR 423 MYHQF ELAEVDITT MEVGPTCHYVMGG+EVD DTGAA PGLFAAGECAGGMHGSNR Sbjct 374 MYHQFMELAEVDITTDEMEVGPTCHYVMGGIEVDPDTGAAKTPGLFAAGECAGGMHGSNR 433 Query 424 LGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAPEN 483 LGGNSLSDLLVFGRRAGLGA+DYVRAL +RP VS EA++AA + AL+PF+GP +G PEN Sbjct 434 LGGNSLSDLLVFGRRAGLGASDYVRALGNRPTVSEEAVEAALKLALAPFDGPSEGQ-PEN 492 Query 484 PYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSIDL 543 PY + +DLQ MN+LVGIIR ADEI A L EL R+ + VEG+R +NPGW+L+IDL Sbjct 493 PYTMQLDLQDTMNELVGIIRKADEIIEAQGKLDELRDRFKRMKVEGNRHFNPGWHLAIDL 552 Query 544 RNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGDSN 603 RNMLLVSECVA+AAL+RTESRGGHTRDD+P M+ WRR LLVCRA G Sbjct 553 RNMLLVSECVAKAALERTESRGGHTRDDYPSMEAEWRRTLLVCRA--------QGDDVVV 604 Query 604 CHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 + VT++ Q PMR DLLEL +I EL+KYYTDEELA HP RRG Sbjct 605 PSVTVTREDQVPMRDDLLELLDIEELQKYYTDEELANHPARRG 647 >gi|257056751|ref|YP_003134583.1| succinate dehydrogenase flavoprotein subunit [Saccharomonospora viridis DSM 43017] gi|256586623|gb|ACU97756.1| succinate dehydrogenase subunit A [Saccharomonospora viridis DSM 43017] Length=638 Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/644 (80%), Positives = 562/644 (88%), Gaps = 8/644 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERHSYDVVVIGAGGAGLRAVIEAR+RGL VAVV KSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MTEVERHSYDVVVIGAGGAGLRAVIEARQRGLSVAVVSKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NP D W+ HF DTMRGGKFLN+WRMAELHAKEAPDRVWELETYGALFDRT DGRISQRN Sbjct 61 VNPNDGWQVHFRDTMRGGKFLNDWRMAELHAKEAPDRVWELETYGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED+A GDYEA++KVF ECTITELL Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAAHGDYEAKLKVFDECTITELLTQ 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 GAIAGAFGYWRESGRF++FEAPAV+LATGGIGKSF+VTSNSWEYTGDGHALALRAGATL Sbjct 181 DGAIAGAFGYWRESGRFVLFEAPAVILATGGIGKSFQVTSNSWEYTGDGHALALRAGATL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVL+NSE RFMF YIP VFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLRNSEGERFMFRYIPDVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD+W +D D+ RRTPDLLPRDEVARAIN+EVK GRG+PHGGV+LDIASRL EIKRR Sbjct 301 EEADRWYEDPDNNRRTPDLLPRDEVARAINTEVKEGRGSPHGGVFLDIASRLPAEEIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGG+EVD DT A++VPGLFAAGECAGGMHG Sbjct 361 LPSMYHQFKELADVDITAEPMEVGPTCHYVMGGIEVDPDTAASSVPGLFAAGECAGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAG+GAADYV +L+SRP VSA + AA+ AL+PF+ P+DG A Sbjct 421 SNRLGGNSLSDLLVFGRRAGIGAADYVDSLTSRPTVSAVDLAMAARTALAPFDPPRDGQA 480 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY+L +LQ MNDLVGIIR A E+ +AL L E+ R V VEGHRQYNPGW+L+ Sbjct 481 AENPYSLQTELQQCMNDLVGIIRTASEMEQALEKLDEIRERLRAVTVEGHRQYNPGWHLA 540 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DLRNMLLVSECVAR+AL+RTESRGGHTRDD+P MD NWR++LLVC AT+ Sbjct 541 LDLRNMLLVSECVARSALRRTESRGGHTRDDYPQMDANWRKVLLVCSATDREA------- 593 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGR 644 I VT + Q PMR DL LFE+SELEKYYTDEELAEHP R Sbjct 594 -PLPRIEVTTKEQKPMRDDLFALFELSELEKYYTDEELAEHPER 636 >gi|300784260|ref|YP_003764551.1| succinate dehydrogenase flavoprotein subunit [Amycolatopsis mediterranei U32] gi|299793774|gb|ADJ44149.1| succinate dehydrogenase flavoprotein subunit [Amycolatopsis mediterranei U32] gi|340525678|gb|AEK40883.1| succinate dehydrogenase flavoprotein subunit [Amycolatopsis mediterranei S699] Length=638 Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/645 (80%), Positives = 557/645 (87%), Gaps = 8/645 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERHSYDVVVIGAGGAGLRAVIEARERG +VAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MTEVERHSYDVVVIGAGGAGLRAVIEARERGFRVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN DNW+ HF DTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT DGRISQRN Sbjct 61 ANSNDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTADGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED AE GDYEA+IKVFAECT+TELL Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAETGDYEAKIKVFAECTVTELLTT 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 G IAGAFGYWRESGRFI+FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA L Sbjct 181 DGKIAGAFGYWRESGRFILFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAKL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ RFMF+Y+P VFKGQYAE+E Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGKRFMFEYVPDVFKGQYAESE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD+W D D+ RRTPDLLPRDEVARAINSEVK GRG+PHGGV+LDIASRL EIK+R Sbjct 301 EEADRWYADADNNRRTPDLLPRDEVARAINSEVKEGRGSPHGGVFLDIASRLPAEEIKKR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGG+EVD DT AA+VPGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELADVDITAEPMEVGPTCHYVMGGIEVDPDTAAASVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAA+YV L RPAVS +DAAA+ AL+PF+ P G++ Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAAEYVLGLDGRPAVSESDVDAAAKMALAPFD-PPSGAS 479 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY LH +LQ MNDLVGIIR A EI +AL LAEL R V VEGHRQ+NPGW+L+ Sbjct 480 AENPYTLHTELQQSMNDLVGIIRKAGEIEQALVKLAELRQRILRVTVEGHRQFNPGWHLA 539 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 IDLRNML+VSECVA+AAL RTESRGGHTRDD+PGMD WR LLVC A E G Sbjct 540 IDLRNMLMVSECVAKAALTRTESRGGHTRDDYPGMDAEWRHKLLVCSAAE-------GDN 592 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 I+V + Q P+R DLLELFE EL KYYTD+EL HPG + Sbjct 593 PVVPDIDVVVKEQVPLRQDLLELFEFGELGKYYTDDELEAHPGSK 637 >gi|118468903|ref|YP_884831.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium smegmatis str. MC2 155] gi|118170190|gb|ABK71086.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium smegmatis str. MC2 155] Length=635 Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/646 (81%), Positives = 556/646 (87%), Gaps = 11/646 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E+ERHSYDVVVIGAGGAGLRAVIEARERGL+VAVV KSLFGKAHTVMAEGGCAAAM N Sbjct 1 MSELERHSYDVVVIGAGGAGLRAVIEARERGLRVAVVTKSLFGKAHTVMAEGGCAAAMRN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N KD+W+ HFGDTMRGGKFLNNWRMAELHA+EAPDRVWELETYGALFDRT DG+ISQRN Sbjct 61 VNTKDSWQVHFGDTMRGGKFLNNWRMAELHAQEAPDRVWELETYGALFDRTKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLE+IRTLQQK+VSLQQED ELGDYEARI+VF E +ITEL+ D Sbjct 121 FGGHTYPRLAHVGDRTGLEIIRTLQQKIVSLQQEDKRELGDYEARIRVFHETSITELILD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 G IAGAFGY+RE+G F++FEAPAVVLATGGIGKSFKV+SNSWEYTGDGHALALRAG+ L Sbjct 181 DGKIAGAFGYYRETGNFVLFEAPAVVLATGGIGKSFKVSSNSWEYTGDGHALALRAGSAL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEF+QFHPTGMVWP SVKGILVTEGVRGDGGVLKNSE RFMFDYIP VFKGQYAETE Sbjct 241 INMEFIQFHPTGMVWPLSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPSVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEADQWLKDNDSARRTPDLLPRDEVARAIN+EVKAGRG+PHGGVYLDIASR+ EIKRR Sbjct 301 EEADQWLKDNDSARRTPDLLPRDEVARAINAEVKAGRGSPHGGVYLDIASRMPAEEIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQF ELAEVDIT AMEVGPTCHYVMGG+EVD DT A PGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFIELAEVDITKDAMEVGPTCHYVMGGIEVDPDTAAGATPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYVRAL RP VS A++ A + L+PFE PK + Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALPDRPKVSEAAVEDATRLVLAPFE-PK--AE 477 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 PENPY LH +LQ MNDLVGIIR EI AL L EL RY NV VEG R +NPGW+L+ Sbjct 478 PENPYTLHAELQQSMNDLVGIIRKEAEIQEALDRLQELKRRYANVTVEGGRVFNPGWHLA 537 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 ID+RNMLLVSECVA+AALQRTESRGGHTRDD+P MD NWR LLVCR SG Sbjct 538 IDMRNMLLVSECVAKAALQRTESRGGHTRDDYPEMDANWRNTLLVCRV--------SGGD 589 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 + VT + Q PMRPDLL FE+SELEKYYT EELAEHP R+G Sbjct 590 PVVPDVTVTPEQQVPMRPDLLGCFELSELEKYYTPEELAEHPERKG 635 >gi|54027576|ref|YP_121818.1| succinate dehydrogenase flavoprotein subunit [Nocardia farcinica IFM 10152] gi|54019084|dbj|BAD60454.1| putative succinate dehydrogenase flavoprotein subunit [Nocardia farcinica IFM 10152] Length=646 Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/649 (80%), Positives = 562/649 (87%), Gaps = 13/649 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERH+YDVVVIGAGGAGLRAVIEARERGL VAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MPEVERHNYDVVVIGAGGAGLRAVIEARERGLSVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KD W+THF DTMRGGKFLNNWRMAELHA+EAPDRVWELE+YGALFDRT DGRISQRN Sbjct 61 ANEKDTWQTHFKDTMRGGKFLNNWRMAELHAQEAPDRVWELESYGALFDRTADGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLE+IRT+QQK+V+LQQEDHA GDYEARIKVFAECT+TELL D Sbjct 121 FGGHTYPRLAHVGDRTGLEIIRTMQQKIVALQQEDHAATGDYEARIKVFAECTVTELLTD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 G IAGAFGYWRESG+F++FEAPAVVLATGGIGKS+KVTSNSWEYTGDGHALALRAGATL Sbjct 181 SGRIAGAFGYWRESGKFVLFEAPAVVLATGGIGKSYKVTSNSWEYTGDGHALALRAGATL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEF+QFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSE RFMFDYIP VFKGQYAETE Sbjct 241 INMEFLQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPGVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EADQWLKDNDSARRTPDLLPRDEVARAIN EVKAGRGT HGGV+LDIASRL EIKRR Sbjct 301 AEADQWLKDNDSARRTPDLLPRDEVARAINEEVKAGRGTEHGGVFLDIASRLPAEEIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGG+EVD DTGAA+VPGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELADVDITKEPMEVGPTCHYVMGGIEVDPDTGAASVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAA YV L +RP VS + AAA+ A++PF+ P DG Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAAAYVEQLDARPQVSDAGVAAAARTAVAPFDPPADGRG 480 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY LH DLQ VMNDLVGIIR E+ +A+ L EL R+ NV VEGHRQ+NPGW+L+ Sbjct 481 -ENPYTLHTDLQQVMNDLVGIIRKEHELEQAIERLGELRERFANVTVEGHRQFNPGWHLA 539 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DLRNMLLVSECVA+AALQRTESRGGHTRDD+P MDP WR LLVC Sbjct 540 LDLRNMLLVSECVAQAALQRTESRGGHTRDDYPTMDPAWRNKLLVCAVD---------PD 590 Query 601 DSNC---HINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 D+ + VT + QTPMRPDLL LF+++ELEKYY ELA HP G Sbjct 591 DAEAVVPRVRVTPKDQTPMRPDLLALFDLAELEKYYHSAELAGHPAGAG 639 >gi|226360190|ref|YP_002777968.1| succinate dehydrogenase flavoprotein subunit [Rhodococcus opacus B4] gi|226238675|dbj|BAH49023.1| putative succinate dehydrogenase flavoprotein subunit [Rhodococcus opacus B4] Length=644 Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/647 (80%), Positives = 564/647 (88%), Gaps = 6/647 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERH YDVVVIGAGGAGLRAVIEARE+GL VAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MTEVERHQYDVVVIGAGGAGLRAVIEAREQGLSVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KD W+THF DTMRGGKFLNNWRMAELHA+EAPDRVWELETYGALFDRT DGRISQRN Sbjct 61 ANDKDTWQTHFQDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED A GDYEARIK+FAECTI+EL KD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAATGDYEARIKIFAECTISELTKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 I+GAFGYWRESGRF++FEAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALALRAGA L Sbjct 181 GDRISGAFGYWRESGRFVLFEAPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRAGANL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSE RFMF YIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGERFMFSYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD W +D+D+ RRTPDLLPRDEVARAINSEVKAGR TPHGGVYLDIASR+ EI RR Sbjct 301 EEADGWYEDSDNNRRTPDLLPRDEVARAINSEVKAGRQTPHGGVYLDIASRMPADEIVRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGG+EVD D+G+++V GLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELADVDITKEQMEVGPTCHYVMGGIEVDPDSGSSSVAGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFE-GPKDGS 479 SNRLGGNSLSDLLVFGRRAGLGAA+YV++L RPAVSA A+DAAA+ LSPF+ ++G Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAAEYVKSLQERPAVSAAAVDAAARMLLSPFDPSVEEGG 480 Query 480 APENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNL 539 ENPY LH +LQ MNDLVGIIR DEI+RAL L E+ R V VEGHRQ+NPGW+L Sbjct 481 TTENPYTLHTELQQTMNDLVGIIRKEDEIARALEKLTEIKGRIGGVEVEGHRQFNPGWHL 540 Query 540 SIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGS 599 ++DLRNM+LVSECVA+AAL RTESRGGHTRDDHP M+ +WR LLVC M S Sbjct 541 AVDLRNMVLVSECVAQAALLRTESRGGHTRDDHPNMEADWRNTLLVCSVVGDM----SAH 596 Query 600 GDSNC-HINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 DS + VT++ Q PMRP+LLELF+I EL KYYTD ELAEHPGR+ Sbjct 597 PDSVVPDVTVTREPQLPMRPELLELFDIDELAKYYTDAELAEHPGRK 643 >gi|312140082|ref|YP_004007418.1| succinate dehydrogenase flavoprotein subunit sdha1 [Rhodococcus equi 103S] gi|311889421|emb|CBH48738.1| succinate dehydrogenase flavoprotein subunit SdhA1 [Rhodococcus equi 103S] Length=645 Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/644 (80%), Positives = 555/644 (87%), Gaps = 3/644 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERH YDVVVIGAGGAGLRAVIEARERGL VAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 3 MAEVERHRYDVVVIGAGGAGLRAVIEARERGLSVAVVCKSLFGKAHTVMAEGGCAAAMGN 62 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KD+W+ HFGDTMRGGKFLNNWRMAELHA+EAP+RVWELETYGALFDRT+DGRISQRN Sbjct 63 ANSKDSWQVHFGDTMRGGKFLNNWRMAELHAREAPERVWELETYGALFDRTEDGRISQRN 122 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+V+LQQED A GDYEAR+KVFAECT+TELLK+ Sbjct 123 FGGHTYPRLAHVGDRTGLELIRTMQQKIVALQQEDFAATGDYEARVKVFAECTVTELLKE 182 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 IAGAFGYWRESGRF++FEAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALALRAGA L Sbjct 183 GDRIAGAFGYWRESGRFVLFEAPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRAGANL 242 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ RFMF YIP VFKGQYAET Sbjct 243 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGERFMFSYIPAVFKGQYAETA 302 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD+W D D+ RRTPDLLPRDEVARAINSEVKAGR TPHGGVYLDIASR+ EI RR Sbjct 303 EEADKWYDDPDNNRRTPDLLPRDEVARAINSEVKAGRSTPHGGVYLDIASRMPAEEIVRR 362 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSM+HQFKELA+VDIT + MEVGPTCHYVMGG+EVD DTG++TVPGLFAAGEC+GGMHG Sbjct 363 LPSMHHQFKELADVDITKEQMEVGPTCHYVMGGIEVDPDTGSSTVPGLFAAGECSGGMHG 422 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYV+ L +RP V+ + AA+ AL PF+ P G A Sbjct 423 SNRLGGNSLSDLLVFGRRAGLGAADYVQTLEARPTVAEADVATAARAALLPFDPPVPG-A 481 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY LH LQ MNDLVGIIR EI RA+ LA++ SR V VEGHRQ+NPGW+L+ Sbjct 482 GENPYTLHTQLQQTMNDLVGIIRTEAEIERAIATLADVKSRLPGVTVEGHRQFNPGWHLA 541 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DLRNM+LVSECVARAAL RTESRGGHTRDD P MDP WR LLVC + +G G Sbjct 542 LDLRNMVLVSECVARAALMRTESRGGHTRDDFPSMDPQWRSTLLVC--STVADDRAAGDG 599 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGR 644 S + VT++ Q PMRPDLL LF+I EL KYYTD EL HPGR Sbjct 600 TSVPDVIVTREQQLPMRPDLLALFDIDELGKYYTDAELDAHPGR 643 >gi|254820422|ref|ZP_05225423.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium intracellulare ATCC 13950] Length=599 Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/596 (85%), Positives = 539/596 (91%), Gaps = 3/596 (0%) Query 49 MAEGGCAAAMGNANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALF 108 MAEGGCAA+MGN NPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALF Sbjct 1 MAEGGCAASMGNTNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALF 60 Query 109 DRTDDGRISQRNFGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKV 168 DR DG+ISQRNFGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED+AELGDYEARI+V Sbjct 61 DRLKDGKISQRNFGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAELGDYEARIRV 120 Query 169 FAECTITELLKDQGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGD 228 FAE TITEL+KD AIAGAFGY RESG FI+FEAPAVVLATGGIGKSFKVTSNSWEYTGD Sbjct 121 FAETTITELIKDGDAIAGAFGYIRESGNFILFEAPAVVLATGGIGKSFKVTSNSWEYTGD 180 Query 229 GHALALRAGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYI 288 GHALALRAGA+LINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS++ RFMFDYI Sbjct 181 GHALALRAGASLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDDKRFMFDYI 240 Query 289 PPVFKGQYAETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDI 348 PPVFKGQYAETE+EADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRG+PHGGV+LDI Sbjct 241 PPVFKGQYAETEQEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDI 300 Query 349 ASRLTPAEIKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGL 408 ASRLTPAEI RRLPSMYHQFKELA VDIT + MEVGPTCHYVMGGVEVDADTGAATVPGL Sbjct 301 ASRLTPAEINRRLPSMYHQFKELAGVDITKEPMEVGPTCHYVMGGVEVDADTGAATVPGL 360 Query 409 FAAGECAGGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQA 468 FAAGEC+GGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRP V A++AAA++A Sbjct 361 FAAGECSGGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTVGDGAVEAAAKRA 420 Query 469 LSPFEGPKDGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVE 528 LSPFE P G ENPY L ++LQ MNDLVGIIRNADEIS AL L +L R+ N+ VE Sbjct 421 LSPFEAPAGGGPGENPYTLQLELQQSMNDLVGIIRNADEISEALARLDKLRERFKNLHVE 480 Query 529 GHRQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRA 588 G R+YNPGWNL+IDLRNMLLVSECVA+AALQRTESRGGHTRDDHP MD +WR++LLVC Sbjct 481 GQRRYNPGWNLAIDLRNMLLVSECVAKAALQRTESRGGHTRDDHPSMDSSWRKLLLVC-- 538 Query 589 TETMGTGGSGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGR 644 E + G I +T++ QTPMRPDLLELF+I+ELEKYYTDEELA HPGR Sbjct 539 -EAVAEPGDVEAAVIPDITITKKEQTPMRPDLLELFDIAELEKYYTDEELAGHPGR 593 >gi|111018062|ref|YP_701034.1| succinate dehydrogenase flavoprotein subunit [Rhodococcus jostii RHA1] gi|110817592|gb|ABG92876.1| succinate dehydrogenase flavoprotein subunit [Rhodococcus jostii RHA1] Length=644 Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/647 (80%), Positives = 560/647 (87%), Gaps = 6/647 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERH YDVVVIGAGGAGLRAVIEARE+GL VAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MTEVERHQYDVVVIGAGGAGLRAVIEAREQGLSVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KD W+THF DTMRGGKFLNNWRMAELHA+EAPDRVWELETYGALFDRT DGRISQRN Sbjct 61 ANEKDTWQTHFQDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED A GDYEARIK+FAECTI+EL KD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAATGDYEARIKIFAECTISELTKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 I+GAFGYWRESGRF++FEAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALALRAGA L Sbjct 181 GDRISGAFGYWRESGRFVLFEAPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRAGANL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSE RFMF YIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGERFMFSYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD W KD+D+ RRTPDLLPRDEVARAINSEVKAGR TPHGGVYLDIASR+ EI RR Sbjct 301 EEADGWYKDSDNNRRTPDLLPRDEVARAINSEVKAGRQTPHGGVYLDIASRMPADEIVRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGG+EVD D+G+++V GLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELADVDITKEQMEVGPTCHYVMGGIEVDPDSGSSSVAGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFE-GPKDGS 479 SNRLGGNSLSDLLVFGRRAGLGAA+YV++L RP VSA+A+DAAA+ LSPF+ +G Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAAEYVKSLQDRPVVSADAVDAAARMLLSPFDPAVGEGG 480 Query 480 APENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNL 539 ENPY LH +LQ MNDLVGIIR DEI RAL L E+ R V VEGHRQ+NPGW+L Sbjct 481 TTENPYTLHTELQQTMNDLVGIIRKEDEIVRALEKLTEIKGRIGGVEVEGHRQFNPGWHL 540 Query 540 SIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGS 599 ++DLRNM+LVSECVA+AAL RTESRGGHTRDDHP M+ WR LLVC M S Sbjct 541 AVDLRNMVLVSECVAQAALLRTESRGGHTRDDHPSMEAEWRNTLLVCSVVGDM----SAH 596 Query 600 GDSNC-HINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRR 645 DS + VT++ Q PMR +LLELF+I EL KYYTD ELAEHPGR+ Sbjct 597 PDSVVPDVTVTREPQLPMRAELLELFDIDELAKYYTDAELAEHPGRK 643 >gi|145220998|ref|YP_001131676.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium gilvum PYR-GCK] gi|315442031|ref|YP_004074910.1| succinate dehydrogenase subunit A [Mycobacterium sp. Spyr1] gi|145213484|gb|ABP42888.1| succinate dehydrogenase subunit A [Mycobacterium gilvum PYR-GCK] gi|315260334|gb|ADT97075.1| succinate dehydrogenase subunit A [Mycobacterium sp. Spyr1] Length=644 Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/645 (79%), Positives = 558/645 (87%), Gaps = 8/645 (1%) Query 3 EVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNAN 62 ++ERH YDVVVIGAGGAGLRAVIEARERGL+VAVV KSLFGKAHTVMAEGGCAAAM N N Sbjct 7 QLERHEYDVVVIGAGGAGLRAVIEARERGLRVAVVTKSLFGKAHTVMAEGGCAAAMRNVN 66 Query 63 PKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFG 122 KD+W+ HFGDTMRGGKFLNNWRMAELHA+EAPDRVWELETYGALFDRT DGRISQRNFG Sbjct 67 TKDSWQVHFGDTMRGGKFLNNWRMAELHAQEAPDRVWELETYGALFDRTKDGRISQRNFG 126 Query 123 GHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQG 182 GHTYPRLAHVGDRTGLE+IRTLQQK+VSLQQED ELGD++ARI+VF EC+ITE++K+ G Sbjct 127 GHTYPRLAHVGDRTGLEIIRTLQQKIVSLQQEDKRELGDFDARIRVFHECSITEIIKENG 186 Query 183 AIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLIN 242 +AGAFGY+RE+G+F++FEAPA+VLATGGIGKSFKV+SNSWEYTGDGHALALRAG+ LIN Sbjct 187 RVAGAFGYYRETGKFVLFEAPAIVLATGGIGKSFKVSSNSWEYTGDGHALALRAGSGLIN 246 Query 243 MEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEE 302 MEF+QFHPTGMVWP SVKGILVTEGVRGDGGVLKNSE RFMFDYIP VFKGQYAE+EEE Sbjct 247 MEFIQFHPTGMVWPLSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPDVFKGQYAESEEE 306 Query 303 ADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLP 362 ADQWLKDNDSARRTPDLLPRDEVARAIN EVK GRGTPHGGVYLDIASR+ EIKRRLP Sbjct 307 ADQWLKDNDSARRTPDLLPRDEVARAINEEVKNGRGTPHGGVYLDIASRMPAEEIKRRLP 366 Query 363 SMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHGSN 422 SMYHQF ELAEVDIT MEVGPTCHYVMGG+EVD DTG A PGLFAAGEC+GGMHGSN Sbjct 367 SMYHQFIELAEVDITKDEMEVGPTCHYVMGGIEVDPDTGEAATPGLFAAGECSGGMHGSN 426 Query 423 RLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAPE 482 RLGGNSLSDLLVFGRRAGLGA+DYVR+L +RPAV+ A+ A Q AL PFE D E Sbjct 427 RLGGNSLSDLLVFGRRAGLGASDYVRSLDNRPAVTDAALQRAEQLALLPFEPKADA---E 483 Query 483 NPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSID 542 NPY LH +LQ MNDL GIIR +E+ L + EL RY NV+VEG R +NPGW+L+ID Sbjct 484 NPYTLHAELQESMNDLAGIIRKENELHEVLAKIDELKKRYQNVVVEGGRIFNPGWHLAID 543 Query 543 LRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGDS 602 +RNMLLVSECVA+AALQRTESRGGHTRDD+P MD +WR LLVC+ T+G GG GD Sbjct 544 MRNMLLVSECVAKAALQRTESRGGHTRDDYPKMDSHWRNKLLVCK---TVG-GGDEPGDP 599 Query 603 NC-HINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 ++V + Q PMRPDLL FE+SELEKYYT EELAEHP ++G Sbjct 600 IIPEVSVEVEPQPPMRPDLLATFELSELEKYYTPEELAEHPEQKG 644 >gi|302525502|ref|ZP_07277844.1| succinate dehydrogenase, flavoprotein subunit [Streptomyces sp. AA4] gi|302434397|gb|EFL06213.1| succinate dehydrogenase, flavoprotein subunit [Streptomyces sp. AA4] Length=638 Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/644 (80%), Positives = 555/644 (87%), Gaps = 8/644 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERHSYDVVVIGAGGAGLRAVIEARERG VAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MTEVERHSYDVVVIGAGGAGLRAVIEARERGFSVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN DNW+ HF DTMRGGKFLNNWRMAELHA+EAPDRVWELETYGALFDRT DGRISQRN Sbjct 61 ANSNDNWQVHFRDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTADGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED + GDYEARIKVFAECT+TELL D Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFKKYGDYEARIKVFAECTVTELLLD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 GAIAGAFGYWRESGRF++FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA L Sbjct 181 NGAIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAKL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSE+ RFMF+Y+P VFKGQYA++E Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEDKRFMFEYVPEVFKGQYADSE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 +EAD+W D ++ RRTPDLLPRDEVARAINSEVK GRG+PHGGV+LDIASRL EI+RR Sbjct 301 DEADRWYTDQENNRRTPDLLPRDEVARAINSEVKEGRGSPHGGVFLDIASRLPAEEIQRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA+VDIT +AMEVGPTCHYVMGGVEVD DTGAA+VPGLFAAGEC+GGMHG Sbjct 361 LPSMYHQFKELADVDITKEAMEVGPTCHYVMGGVEVDPDTGAASVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAA YV L RPAVS +D AA AL PF P DG+ Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAASYVDGLKDRPAVSQSDVDTAAAMALEPFNPPADGT- 479 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 PENPY LH +LQ MNDLVGIIR A EI +AL LAE+ R V VEGHRQ+NPGW+L+ Sbjct 480 PENPYTLHTELQQSMNDLVGIIRKAGEIRQALEKLAEIRGRVRQVTVEGHRQFNPGWHLA 539 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DLRNMLLVSECVARAAL RTESRGGHTRDD+P MD WR LLVC A G Sbjct 540 LDLRNMLLVSECVARAALTRTESRGGHTRDDYPSMDAEWRHRLLVCSAR-------PGDN 592 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGR 644 ++V + Q PMRPDLLELFE+ EL KY+TD EL HPGR Sbjct 593 PLVPDVDVAVKEQAPMRPDLLELFELDELGKYFTDAELETHPGR 636 >gi|325674441|ref|ZP_08154129.1| succinate dehydrogenase flavoprotein subunit [Rhodococcus equi ATCC 33707] gi|325554701|gb|EGD24375.1| succinate dehydrogenase flavoprotein subunit [Rhodococcus equi ATCC 33707] Length=643 Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/644 (79%), Positives = 553/644 (86%), Gaps = 3/644 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M EVERH YDVVVIGAGGAGLRAVIEARERGL VAVVCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MAEVERHRYDVVVIGAGGAGLRAVIEARERGLSVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KD+W+ HFGDTMRGGKFL NWRMAELHA+EAP+RVWELETYGALFDRT+DGRISQRN Sbjct 61 ANSKDSWQVHFGDTMRGGKFLGNWRMAELHAREAPERVWELETYGALFDRTEDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+V+LQQED A GDYEAR+KVFAECT+TELLK+ Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVALQQEDFAATGDYEARVKVFAECTVTELLKE 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 IAGAFGYWRESGRF++FEAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALALRAGA L Sbjct 181 GDRIAGAFGYWRESGRFVLFEAPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRAGANL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS+ RFMF YIP VFKGQYAET Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGERFMFSYIPAVFKGQYAETA 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD+W D D+ RRTPDLLPRDEVARAINSEVKAGR TPHGGVYLDIASR+ EI RR Sbjct 301 EEADKWYDDPDNNRRTPDLLPRDEVARAINSEVKAGRSTPHGGVYLDIASRMPAEEIVRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSM+HQFKELA+VDIT + MEVGPTCHYVMGG+EVD DTG++TV GLFAAGEC+GGMHG Sbjct 361 LPSMHHQFKELADVDITKEQMEVGPTCHYVMGGIEVDPDTGSSTVAGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAADYV++L +RP V+ + AA+ AL PF+ P G A Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAADYVQSLEARPTVAEADVATAARAALLPFDPPVPG-A 479 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY LH LQ MNDLVGIIR EI RA+ LA++ SR V VEGHRQ+NPGW+L+ Sbjct 480 GENPYTLHTQLQQTMNDLVGIIRTEAEIERAIATLADVKSRLPGVTVEGHRQFNPGWHLA 539 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DLRNM+LVSECVARAAL RTESRGGHTRDD P MDP WR LLVC + + G Sbjct 540 LDLRNMVLVSECVARAALMRTESRGGHTRDDFPSMDPQWRSTLLVC--STVADDRAAEDG 597 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGR 644 S + VT++ Q PMRPDLL LF+I EL KYYTD EL HPGR Sbjct 598 TSVPDVIVTREQQLPMRPDLLALFDIDELGKYYTDAELDAHPGR 641 >gi|343927512|ref|ZP_08766983.1| putative succinate dehydrogenase flavoprotein subunit [Gordonia alkanivorans NBRC 16433] gi|343762586|dbj|GAA13909.1| putative succinate dehydrogenase flavoprotein subunit [Gordonia alkanivorans NBRC 16433] Length=647 Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/646 (80%), Positives = 560/646 (87%), Gaps = 8/646 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E ER+ YDVVVIGAGGAGLRAVIEARE+G VAVVCKSLFGKAHTVMAEGGCAA+MGN Sbjct 1 MTEPERYQYDVVVIGAGGAGLRAVIEAREKGYSVAVVCKSLFGKAHTVMAEGGCAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KDNW THF DTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT DGRI+QRN Sbjct 61 ANAKDNWATHFQDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTADGRIAQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED A GDYE+RIKVFAECTITELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAATGDYESRIKVFAECTITELLKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 AIAGAFGYWRESGRFIVFEAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALALRAGA+L Sbjct 181 GDAIAGAFGYWRESGRFIVFEAPAVVVATGGIGKSFKVTSNSWEYTGDGHALALRAGASL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKN++ RFMFDYIPPVFKGQYAETE Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNTDGKRFMFDYIPPVFKGQYAETE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 +EAD+WL DNDSARRTPDLLPRDEVARAIN EVKAGRGT HGGVYLDIASR+ EI RR Sbjct 301 KEADEWLADNDSARRTPDLLPRDEVARAINEEVKAGRGTEHGGVYLDIASRMPAEEIIRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSM+HQFKELA+VDIT + MEVGPTCHYVMGG+EVD DT A+ VPGLFAAGEC+GGMHG Sbjct 361 LPSMHHQFKELADVDITKEPMEVGPTCHYVMGGIEVDPDTAASRVPGLFAAGECSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGAA YV +L +RP ++ + ID AA+ ALSPF+ P DG Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGAASYVESLGNRPEIAQDDIDRAAEYALSPFDPPADGK- 479 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 PENPY LHMDLQ MNDLVGIIR E+ AL +L++L +R ++ VEGHRQ+NPGW+L+ Sbjct 480 PENPYTLHMDLQQAMNDLVGIIRKEAEMQEALRVLSDLRNRLGSMQVEGHRQFNPGWHLA 539 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 IDLRNMLLVSECVA+AAL RTESRGGHTRDDHP MD WR LLVC T + + Sbjct 540 IDLRNMLLVSECVAKAALMRTESRGGHTRDDHPSMDSAWRNTLLVC-------TAETSTD 592 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 + V ++ Q PMRPDLLELFE E+EKYYT E+A HPG G Sbjct 593 SPVPEVEVVEEEQEPMRPDLLELFEFEEIEKYYTAAEIAGHPGAGG 638 >gi|120401310|ref|YP_951139.1| succinate dehydrogenase flavoprotein subunit [Mycobacterium vanbaalenii PYR-1] gi|119954128|gb|ABM11133.1| succinate dehydrogenase subunit A [Mycobacterium vanbaalenii PYR-1] Length=627 Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/636 (79%), Positives = 545/636 (86%), Gaps = 9/636 (1%) Query 11 VVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANPKDNWKTH 70 +VVIGAGGAGLRAVIEARERGL+VAVV KSLFGKAHTVMAEGGCAAAM N N KD+W+ H Sbjct 1 MVVIGAGGAGLRAVIEARERGLRVAVVTKSLFGKAHTVMAEGGCAAAMRNVNTKDSWQVH 60 Query 71 FGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGGHTYPRLA 130 FGDTMRGGKFLNNWRMAELHA+EAPDRVWELETYGALFDRT DGRISQRNFGGHTYPRLA Sbjct 61 FGDTMRGGKFLNNWRMAELHAQEAPDRVWELETYGALFDRTKDGRISQRNFGGHTYPRLA 120 Query 131 HVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGAIAGAFGY 190 HVGDRTGLE+IRTLQQK+VSLQQED ELGD+EARI+VF E +ITEL+KD IAGAFGY Sbjct 121 HVGDRTGLEIIRTLQQKIVSLQQEDKKELGDFEARIRVFHETSITELIKDGDRIAGAFGY 180 Query 191 WRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINMEFVQFHP 250 +RE+G+F++FEAPA+VLATGGIGKSFKV+SNSWEYTGDGHALALRAG+ LINMEF+QFHP Sbjct 181 YRETGKFVLFEAPAIVLATGGIGKSFKVSSNSWEYTGDGHALALRAGSGLINMEFIQFHP 240 Query 251 TGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEADQWLKDN 310 TGMVWP SVKGILVTEGVRGDGGVLKNS+ RFMFDYIP VFKGQYAE+EEEADQWLKDN Sbjct 241 TGMVWPLSVKGILVTEGVRGDGGVLKNSDGKRFMFDYIPEVFKGQYAESEEEADQWLKDN 300 Query 311 DSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPSMYHQFKE 370 DSARRTPDLLPRDEVARAIN EVKAGRGTPHGGVYLDIASR+ EIKRRLPSMYHQF E Sbjct 301 DSARRTPDLLPRDEVARAINEEVKAGRGTPHGGVYLDIASRMPAEEIKRRLPSMYHQFIE 360 Query 371 LAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHGSNRLGGNSLS 430 LAEVDIT MEVGPTCHYVMGG+EVD D+G A GLFAAGEC+GGMHGSNRLGGNSLS Sbjct 361 LAEVDITKDEMEVGPTCHYVMGGIEVDPDSGGAATLGLFAAGECSGGMHGSNRLGGNSLS 420 Query 431 DLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAPENPYALHMD 490 DLLVFGRRAGLGA+DYVR+L RP VS A++ A + AL PFE KD + ENPY LH + Sbjct 421 DLLVFGRRAGLGASDYVRSLPDRPKVSEVALERAEKLALEPFEA-KDNA--ENPYTLHAE 477 Query 491 LQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSIDLRNMLLVS 550 LQ MNDL GIIR +E+ L + EL RY NV+VEG R +NPGW+L+ID+RNMLLVS Sbjct 478 LQESMNDLAGIIRKQNELEEVLLKIDELKRRYRNVVVEGGRIFNPGWHLAIDMRNMLLVS 537 Query 551 ECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGDSNCHINVTQ 610 ECVA+AAL+RTESRGGHTRDD P MD NWR LLVC+ T G G I+V Sbjct 538 ECVAKAALKRTESRGGHTRDDFPQMDSNWRNKLLVCK------TVGGGDDPVIPEISVEV 591 Query 611 QLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 + Q PMRPDLL FE+SELEKYYT EELAEHP R+G Sbjct 592 EPQPPMRPDLLATFELSELEKYYTAEELAEHPQRKG 627 >gi|334337180|ref|YP_004542332.1| succinate dehydrogenase (ubiquinone) [Isoptericola variabilis 225] gi|334107548|gb|AEG44438.1| Succinate dehydrogenase (ubiquinone) [Isoptericola variabilis 225] Length=644 Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/643 (75%), Positives = 544/643 (85%), Gaps = 5/643 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M +ERH YDV+V+GAGGAGLRA IEARERGL+ +VCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MTTIERHEYDVLVVGAGGAGLRAAIEARERGLRTGIVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 KD+W+ HF DTMRGGKFLN+WRMAELHAKEAPDRVWELE +GALFDRT DGRISQRN Sbjct 61 VAEKDSWQVHFRDTMRGGKFLNSWRMAELHAKEAPDRVWELEAWGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRTLQQ+VV+LQ+ D+ GDYE+R++VFAECT+TELL D Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTLQQRVVALQRADYFATGDYESRLRVFAECTVTELLTD 180 Query 181 Q-GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAT 239 GAIAGAFGYWRE+GRF+ F APAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA Sbjct 181 DDGAIAGAFGYWRETGRFVEFSAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAG 240 Query 240 LINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAET 299 L++MEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVL+NS+ RFMF Y+P VFKGQYA+T Sbjct 241 LVDMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLRNSDGDRFMFRYVPDVFKGQYAQT 300 Query 300 EEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKR 359 E+EAD+W D D+ RRTPDLLPRDEVARAIN+EVK GRG+PHGGV+LDIASR+ EIKR Sbjct 301 EDEADRWYTDQDNNRRTPDLLPRDEVARAINTEVKEGRGSPHGGVFLDIASRMPAEEIKR 360 Query 360 RLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMH 419 RLPSMYHQFKELA+VDIT + MEVGPTCHYVMGG++VD DTG ++VPGLFAAGECAGGMH Sbjct 361 RLPSMYHQFKELADVDITAEPMEVGPTCHYVMGGIDVDPDTGQSSVPGLFAAGECAGGMH 420 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGS 479 GSNRLGGNSLSDLLVFGRRAGLGAADYV L+ RP+ ++AAA+ AL+PF+ P G+ Sbjct 421 GSNRLGGNSLSDLLVFGRRAGLGAADYVTGLARRPSRRDRDVEAAARTALAPFDPPSRGA 480 Query 480 APENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNL 539 ENPY LH +LQ VMNDLVGIIR DE++ AL L EL +R +V+VEGHRQYNPGW+L Sbjct 481 RAENPYTLHAELQGVMNDLVGIIRTEDEMTEALERLGELRARLRHVVVEGHRQYNPGWHL 540 Query 540 SIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGS 599 ++DLRNML+VSE VA +AL RTESRGGHTRDDHP +DP WR +LV R G + Sbjct 541 ALDLRNMLMVSEAVASSALMRTESRGGHTRDDHPMLDPEWRHRVLVTRCV----PGEAAD 596 Query 600 GDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHP 642 G + + V + PMR DLL LF+++ELEKYYT EL HP Sbjct 597 GLAVPRVEVEVAERAPMREDLLALFDLTELEKYYTPAELTAHP 639 >gi|134097762|ref|YP_001103423.1| succinate dehydrogenase flavoprotein subunit [Saccharopolyspora erythraea NRRL 2338] gi|291008609|ref|ZP_06566582.1| succinate dehydrogenase flavoprotein subunit [Saccharopolyspora erythraea NRRL 2338] gi|133910385|emb|CAM00498.1| succinate dehydrogenase flavoprotein subunit [Saccharopolyspora erythraea NRRL 2338] Length=623 Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/638 (77%), Positives = 538/638 (85%), Gaps = 16/638 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 MVE+ERH YDVVVIGAGGAGLRA IE R +GL+ AVVCKSLFGKAHTVMAEGG AA+MGN Sbjct 1 MVEIERHDYDVVVIGAGGAGLRAAIETRSQGLRTAVVCKSLFGKAHTVMAEGGIAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N +DNW+ HF DTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT+DGRISQRN Sbjct 61 VNSRDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTEDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+VSLQQED AE GDYEAR+KVF ECT+TELLK+ Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDKAEFGDYEARLKVFQECTVTELLKE 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 G IAGAFGYWRESGRF+ F APAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA+L Sbjct 181 SGRIAGAFGYWRESGRFVQFRAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGASL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE SRFMFDYIP VFK YA++E Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGSRFMFDYIPEVFKDNYADSE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD+W D DS RR P+LLPRDEVARAINSEVK GRG+ HGGV+LD++SRL+ EI RR Sbjct 301 EEADRWYGDPDSNRRPPELLPRDEVARAINSEVKEGRGSEHGGVFLDVSSRLSAEEITRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSM+HQFKELA+VDIT + MEVGPTCHYVMGGVEV+ DT + VPGLFAAGE AGGMHG Sbjct 361 LPSMHHQFKELADVDITAEPMEVGPTCHYVMGGVEVEPDTAQSRVPGLFAAGEVAGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFGRRAGLGA Y+ L SRPAV +D AAQ+A PFE P DG+ Sbjct 421 SNRLGGNSLSDLLVFGRRAGLGATKYLEGLESRPAVRESEVDDAAQRAQIPFE-PGDGA- 478 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPY LH +LQ VMNDLVGIIR +E+ AL L EL R N+ VEG+RQ+NPGW+L+ Sbjct 479 -ENPYGLHSELQQVMNDLVGIIRKGEEMQTALEKLRELKRRAKNLAVEGNRQFNPGWHLA 537 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DL NMLLVSECVA AA+ RTESRGGHTRDDHPGMDP WR ++L C ++ GG Sbjct 538 LDLSNMLLVSECVAAAAVLRTESRGGHTRDDHPGMDPRWRGVVLSC----SLFDGG---- 589 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEEL 638 + VT+Q Q PMR DLL LF++ EL KY+ ++EL Sbjct 590 -----VEVTEQRQPPMRDDLLSLFKVEELRKYFPEDEL 622 >gi|229822043|ref|YP_002883569.1| succinate dehydrogenase flavoprotein subunit [Beutenbergia cavernae DSM 12333] gi|229567956|gb|ACQ81807.1| Succinate dehydrogenase [Beutenbergia cavernae DSM 12333] Length=644 Score = 972 bits (2514), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/644 (77%), Positives = 545/644 (85%), Gaps = 8/644 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E ERH YDV+VIGAGGAGLRA IEAR+RGL+ AV+CKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MTETERHDYDVLVIGAGGAGLRAAIEARQRGLRTAVICKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N D+W+ HF DTMRGGKFLNNWRMAELHAKEAP+RVWELETYGALFDRT DGRISQRN Sbjct 61 VNSNDSWQVHFRDTMRGGKFLNNWRMAELHAKEAPERVWELETYGALFDRTADGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLK- 179 FGGHTYPRLAHVGDRTGLELIRT+QQK+VSLQQED+A GDYEAR++VFAECTITELL Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAATGDYEARLRVFAECTITELLTG 180 Query 180 DQGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAT 239 D GAIAGAFGYWRESGRF+VF APAVVLATGGIGKSFKVTSNSWEYTGDGHALA+RAGA Sbjct 181 DDGAIAGAFGYWRESGRFVVFSAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAMRAGAG 240 Query 240 LINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAET 299 LI+MEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNS RFMF+Y+P VFKGQYAET Sbjct 241 LIDMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSAGERFMFNYVPDVFKGQYAET 300 Query 300 EEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKR 359 EEAD W D ++ RRTPDLLPRDEVARAIN+EVK GRG+PHGGV+LDIASR+ EI+R Sbjct 301 VEEADAWYTDQENNRRTPDLLPRDEVARAINTEVKEGRGSPHGGVFLDIASRMPADEIQR 360 Query 360 RLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMH 419 RLPSMYHQFKELA+VDIT + MEVGPTCHYVMGG+EVD DTG+++VPGLFAAGEC+GGMH Sbjct 361 RLPSMYHQFKELADVDITAEPMEVGPTCHYVMGGIEVDPDTGSSSVPGLFAAGECSGGMH 420 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGS 479 GSNRLGGNSLSDLLVFGRRAGLGAADYV L SRPAV A A+D AA A++PF+ DG Sbjct 421 GSNRLGGNSLSDLLVFGRRAGLGAADYVSGLESRPAVRAAAVDDAAAMAVAPFDPAADGG 480 Query 480 APENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNL 539 + ENPY LH +LQ MNDLVGIIR E+ AL L EL R V+VEGHRQYNPGW+L Sbjct 481 SGENPYTLHAELQTAMNDLVGIIRTEAEMQAALERLGELRERVRGVVVEGHRQYNPGWHL 540 Query 540 SIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGS 599 ++DLRNML+V E VA +AL RTESRGGHTR+DHPGMD WR +LV R + G Sbjct 541 ALDLRNMLMVGEAVASSALLRTESRGGHTREDHPGMDAQWRHRVLVTRCAD------HGG 594 Query 600 GD-SNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHP 642 GD + V + + PMR DLL LF+++ELEKYYT ELA HP Sbjct 595 GDPVVPRVVVEPEERAPMRDDLLALFDLTELEKYYTGGELASHP 638 >gi|269957001|ref|YP_003326790.1| Succinate dehydrogenase [Xylanimonas cellulosilytica DSM 15894] gi|269305682|gb|ACZ31232.1| Succinate dehydrogenase [Xylanimonas cellulosilytica DSM 15894] Length=646 Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/642 (75%), Positives = 543/642 (85%), Gaps = 3/642 (0%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E ERH+YDV+VIGAGGAGLRA I ARERGL+ A+VCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MTETERHAYDVIVIGAGGAGLRAAIAARERGLRTAIVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 KD+W+ HF DTMRGGKFLNNWRMAELHA+EAPDRVWELE++GALFDRT DGRISQRN Sbjct 61 VAEKDSWQVHFRDTMRGGKFLNNWRMAELHAQEAPDRVWELESWGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELL-K 179 FGGHTYPRLAHVGDRTGLE++RTLQQ+VV+LQQ DHAE GDYEAR++VFAECT+TELL Sbjct 121 FGGHTYPRLAHVGDRTGLEILRTLQQRVVALQQADHAETGDYEARLRVFAECTVTELLTD 180 Query 180 DQGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAT 239 D GA+AGAFGYWRESGRF+VFEAPAVVLATGGIGKSF+VTSNSWEYTGDGH LALRAGA+ Sbjct 181 DDGAVAGAFGYWRESGRFLVFEAPAVVLATGGIGKSFQVTSNSWEYTGDGHGLALRAGAS 240 Query 240 LINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAET 299 L++MEFVQFHPTGMVWPPSVKGILVTE VRGDGGVLKNS RFMFDY+P VF+ YAE+ Sbjct 241 LVDMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLKNSAGERFMFDYVPDVFRDLYAES 300 Query 300 EEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKR 359 +EAD+W D ++ RRTPDLLPRDEVARAIN+EVK GRG+PHGGVYLD+ASRL +I+R Sbjct 301 AQEADRWYDDQENNRRTPDLLPRDEVARAINTEVKEGRGSPHGGVYLDVASRLPADQIRR 360 Query 360 RLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMH 419 RLPSMYHQFKELA VDIT +AMEVGPTCHYVMGG++VD DT ++VPGLFAAGECAGGMH Sbjct 361 RLPSMYHQFKELAGVDITAEAMEVGPTCHYVMGGIDVDPDTARSSVPGLFAAGECAGGMH 420 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGS 479 GSNRLGGNSLSDLLVFGRRAGLGAADYV L RP + + +DA A A++PF+ P DG+ Sbjct 421 GSNRLGGNSLSDLLVFGRRAGLGAADYVEGLDRRPTIRDDDVDAGAATAVAPFDPPADGT 480 Query 480 APENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNL 539 ENPY LH DLQ +MNDLVGIIR E+ AL L EL R +V+VEGHR YNPGW+L Sbjct 481 TGENPYTLHADLQRIMNDLVGIIRTEAEMIAALGRLDELRGRLRHVVVEGHRNYNPGWHL 540 Query 540 SIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGS 599 ++DLRNML+VSE VA +AL RTESRGGHTRDD+P +DP+WR +L R T G+ Sbjct 541 ALDLRNMLMVSEAVAASALARTESRGGHTRDDYPTLDPDWRHRVLTTRCAPA-STDDDGA 599 Query 600 GDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEH 641 D + V +TPMRPDLL+LFE++ELEKYYT ELA H Sbjct 600 -DPVPRVVVEPGERTPMRPDLLDLFELTELEKYYTPAELAGH 640 >gi|284033413|ref|YP_003383344.1| L-aspartate oxidase [Kribbella flavida DSM 17836] gi|283812706|gb|ADB34545.1| L-aspartate oxidase [Kribbella flavida DSM 17836] Length=625 Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/639 (77%), Positives = 550/639 (87%), Gaps = 17/639 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E+ERHSYDVVVIGAGGAGLRA IEARE+G + A+VCKSLFGKAHTVMAEGGCAAAMGN Sbjct 1 MTELERHSYDVVVIGAGGAGLRAAIEAREQGKRTAIVCKSLFGKAHTVMAEGGCAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN DNW+ H+ DTMRGGKFLNNWRMAELHA+EAPDRVWELETYGALFDRT+DGRISQRN Sbjct 61 ANSNDNWQVHYRDTMRGGKFLNNWRMAELHAQEAPDRVWELETYGALFDRTEDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGHTYPRLAHVGDRTGLELIRTLQQK+VSLQQED GDYEA +KV+AECT+TELLKD Sbjct 121 FGGHTYPRLAHVGDRTGLELIRTLQQKIVSLQQEDFQATGDYEANLKVYAECTVTELLKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 AI+GAFGYWRESGRFI+F+APAVVLATGG+GKSFKVTSNSWEYTGDGHALA+RAGATL Sbjct 181 GDAISGAFGYWRESGRFILFDAPAVVLATGGVGKSFKVTSNSWEYTGDGHALAMRAGATL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEF+QFHPTGMVWPPSVKGILVTE VRGDGGVLKNSE RFMFDY+P VF+ QYA+TE Sbjct 241 INMEFIQFHPTGMVWPPSVKGILVTESVRGDGGVLKNSEGKRFMFDYVPDVFRAQYADTE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD+W KD D+ RR P+LLPRDEVARAINSEVKAGRGTPHGGV+LD++SRL EI+RR Sbjct 301 EEADRWYKDADNNRRPPELLPRDEVARAINSEVKAGRGTPHGGVFLDVSSRLPAEEIQRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGGVEVD DT ++ VPGLFAAGE AGGMHG Sbjct 361 LPSMYHQFKELADVDITAEPMEVGPTCHYVMGGVEVDPDTASSIVPGLFAAGEVAGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRAL-SSRPAVSAEAIDAAAQQALSPFEGPKDGS 479 SNRLGGNSLSDLLVFGRRAG+GAA YV +L ++RP V+ +DAAA +AL+PFE Sbjct 421 SNRLGGNSLSDLLVFGRRAGMGAALYVDSLGANRPKVAETDVDAAAAEALAPFE----LE 476 Query 480 APENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNL 539 ENPY +H +LQ MNDLVGIIR ADEI +AL LA+ R + VEGHRQ+NPGW+L Sbjct 477 GGENPYTIHTELQQAMNDLVGIIRKADEIEQALARLADFRGRIAKMTVEGHRQFNPGWHL 536 Query 540 SIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGS 599 ++DLRNML VSECVA+AALQR ESRGGHTRDD PGM+ +WR++LLVC + GS Sbjct 537 ALDLRNMLTVSECVAKAALQREESRGGHTRDDFPGMNADWRKVLLVC----ALNADGS-- 590 Query 600 GDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEEL 638 ++V+++ Q PMR DLLELFE+ EL+KY T+EEL Sbjct 591 ------VDVSRKDQVPMREDLLELFELDELKKYLTEEEL 623 >gi|256375564|ref|YP_003099224.1| succinate dehydrogenase flavoprotein subunit [Actinosynnema mirum DSM 43827] gi|255919867|gb|ACU35378.1| Succinate dehydrogenase [Actinosynnema mirum DSM 43827] Length=623 Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/638 (75%), Positives = 528/638 (83%), Gaps = 17/638 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E+ERH++DV+VIGAGGAGLRA IEAR+RG + AV+CKSLFGKAHTVMAEGG AAAMGN Sbjct 1 MPELERHTFDVLVIGAGGAGLRAAIEARQRGARTAVLCKSLFGKAHTVMAEGGIAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 ANP DNW+ HF DTMRGGKFLNNWRMAELHAKEAP RVWELETYGALFDRT DGRISQRN Sbjct 61 ANPNDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPQRVWELETYGALFDRTKDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIR+LQQKVVSLQQED AE GD+E+R+KVF E T+T+L D Sbjct 121 FGGHEYPRLAHVGDRTGLELIRSLQQKVVSLQQEDFAETGDHESRLKVFQEFTVTDLPLD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 G +AGAFGYWRESGRF +FEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA L Sbjct 181 GGRVAGAFGYWRESGRFTLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAEL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 +NMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NS+ RFMF Y+P VFK +YAE E Sbjct 241 VNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSDGERFMFGYVPEVFKDKYAEDE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 E D+W D D RR P+LLPRDEVARAINSEVKAGRGT HGGV+LD++SRL EI+RR Sbjct 301 AEGDRWYTDPDHNRRPPELLPRDEVARAINSEVKAGRGTEHGGVFLDVSSRLPAEEIRRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHG 420 LPSM+HQFKELA+VDIT Q MEVGPTCHYVMGGV VD DTGA++VPGL+AAGE +GGMHG Sbjct 361 LPSMHHQFKELADVDITAQPMEVGPTCHYVMGGVLVDPDTGASSVPGLYAAGEVSGGMHG 420 Query 421 SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSA 480 SNRLGGNSLSDLLVFG+RAG GAADY L++RP EAI A + AL+PF G Sbjct 421 SNRLGGNSLSDLLVFGKRAGEGAADYAAGLTTRPRCGDEAIARAQEVALAPFA----GEG 476 Query 481 PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLS 540 ENPYALH++LQ MNDLVGIIR A E+ AL L L R + VEGHRQ+NPGW+L+ Sbjct 477 GENPYALHVELQQAMNDLVGIIRRAGEMESALERLDGLKRRAAALTVEGHRQFNPGWHLA 536 Query 541 IDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSG 600 +DLRNMLLVSECVARAAL RTESRGGHTRDDHP MD +WRR +L+C S SG Sbjct 537 LDLRNMLLVSECVARAALLRTESRGGHTRDDHPRMDADWRRKVLLC----------SASG 586 Query 601 DSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEEL 638 D + V + Q P+R DLL LFE +ELEKY T EEL Sbjct 587 DG---VAVAELAQEPIRADLLALFERAELEKYLTAEEL 621 >gi|331698356|ref|YP_004334595.1| succinate dehydrogenase (ubiquinone) [Pseudonocardia dioxanivorans CB1190] gi|326953045|gb|AEA26742.1| Succinate dehydrogenase (ubiquinone) [Pseudonocardia dioxanivorans CB1190] Length=648 Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/645 (72%), Positives = 529/645 (83%), Gaps = 15/645 (2%) Query 3 EVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNAN 62 +VE H YDVVVIGAGGAGLRA IEAR +G + A++ KSLFGKAHTVMAEGGCAAAMGN N Sbjct 15 DVEIHDYDVVVIGAGGAGLRAAIEARAQGKRTAIISKSLFGKAHTVMAEGGCAAAMGNVN 74 Query 63 PKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFG 122 P DNW+ HFGDTMRGGKFLNNWRMAELHAKEAPDRVWE+ETYGALFDRT DG+ISQRNFG Sbjct 75 PNDNWRVHFGDTMRGGKFLNNWRMAELHAKEAPDRVWEMETYGALFDRTKDGKISQRNFG 134 Query 123 GHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQG 182 GHTYPRLAHVGDRTGLE IRTLQQK+VSLQQED GDYE+ I+VF E TIT+L K G Sbjct 135 GHTYPRLAHVGDRTGLEPIRTLQQKIVSLQQEDFKATGDYESNIRVFHETTITDLFKADG 194 Query 183 AIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLIN 242 AIAG FGY+R +GRF+ F APA+VLATGG+GKS+ VTSNSWEYTGDGHALALRAGATLIN Sbjct 195 AIAGCFGYFRSTGRFVRFNAPAIVLATGGVGKSYSVTSNSWEYTGDGHALALRAGATLIN 254 Query 243 MEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEE 302 MEF+QFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDYI VFK YA +EEE Sbjct 255 MEFLQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYIADVFKDLYATSEEE 314 Query 303 ADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLP 362 AD+W D D+ RR P+LLPRDEVARAINSEVKAGRGTPHGGV+LD+++RL P EI +RLP Sbjct 315 ADRWYTDPDNNRRPPELLPRDEVARAINSEVKAGRGTPHGGVFLDVSTRLKPEEILKRLP 374 Query 363 SMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHGSN 422 SM+HQFKELA+VDIT + MEVGPTCHYVMGGVEVD DTG + VPGLFAAGEC+GGMHGSN Sbjct 375 SMHHQFKELADVDITKEPMEVGPTCHYVMGGVEVDPDTGMSRVPGLFAAGECSGGMHGSN 434 Query 423 RLGGNSLSDLLVFGRRAGLGAADYVRALSS-RPAVSAEAIDAAAQQALSPFEGPKDGSAP 481 RLGGNSLSDLLVFGRR GLGA++YV L+ RPAV +AA +AL PF +G Sbjct 435 RLGGNSLSDLLVFGRRCGLGASEYVDGLAGRRPAVIESDAEAAVDRALLPFSSATEGG-- 492 Query 482 ENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSI 541 ENP+ +H++LQ M++LVGIIR ADE+ AL L ++ +R V VEG R++NP W+L++ Sbjct 493 ENPFVVHLELQKTMHELVGIIRKADEMEMALKKLEDIATRTRTVAVEGDRKFNPNWHLAL 552 Query 542 DLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGD 601 DLRNMLLVS CVA+AAL+R ESRGGHTRDD P MD +WR +LLV A G+ Sbjct 553 DLRNMLLVSMCVAKAALERQESRGGHTRDDFPVMDADWRHVLLVLEAL----------GE 602 Query 602 SNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEHPGRRG 646 N + +T++ Q PMRPDLL++FE+ EL+KY+T EEL H +G Sbjct 603 DN--VELTRKEQIPMRPDLLDIFEMDELKKYFTGEELGGHRADQG 645 >gi|324997711|ref|ZP_08118823.1| succinate dehydrogenase flavoprotein subunit [Pseudonocardia sp. P1] Length=632 Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/639 (72%), Positives = 524/639 (83%), Gaps = 16/639 (2%) Query 3 EVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNAN 62 E+ERH YDVVVIGAGGAGLRA IEAR +G + A++ KSLFGKAHTVMAEGGCAA+MGNAN Sbjct 4 EIERHEYDVVVIGAGGAGLRAAIEARLQGKRTAIISKSLFGKAHTVMAEGGCAASMGNAN 63 Query 63 PKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFG 122 P DNW+ HF DTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT DG+ISQRNFG Sbjct 64 PNDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTKDGKISQRNFG 123 Query 123 GHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQG 182 GHTYPRLAHVGDRTGLELIRTLQQKVVSLQQED AE GDYEARI+VF ECTITEL G Sbjct 124 GHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDFAETGDYEARIRVFHECTITELFTTDG 183 Query 183 AIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLIN 242 AI+G FGY+R+ GRF+ F+APA+VLATGG+GKS+ VTSNSWEYTGDGHALALRAGA+LIN Sbjct 184 AISGCFGYFRDDGRFVRFDAPAIVLATGGVGKSYSVTSNSWEYTGDGHALALRAGASLIN 243 Query 243 MEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEE 302 MEF+QFHPTGMVWPPSV+G+LVTE VRGDGGVL+N++ RFMF Y+P VFK QYA +EEE Sbjct 244 MEFLQFHPTGMVWPPSVRGLLVTESVRGDGGVLRNTDGERFMFSYVPDVFKEQYATSEEE 303 Query 303 ADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLP 362 D+W D D+ RR P+LLPRDEVARAINSEVKAGRGT HGGV+LD+++RL P EI +RLP Sbjct 304 GDRWYTDPDNNRRPPELLPRDEVARAINSEVKAGRGTDHGGVFLDVSTRLKPEEILKRLP 363 Query 363 SMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHGSN 422 SM+HQFKELA+VDIT + MEVGPTCHYVMGGVEV+ DT + VPGLFAAGE AGGMHGSN Sbjct 364 SMHHQFKELADVDITKEPMEVGPTCHYVMGGVEVEPDTAMSRVPGLFAAGEVAGGMHGSN 423 Query 423 RLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAPE 482 RLGGNSLSDLLVFGRRAGL AA + A RP V+ +D A +AL PF +G E Sbjct 424 RLGGNSLSDLLVFGRRAGLHAAQH--ADRGRPVVAEADVDRALDRALLPFSTATEGG--E 479 Query 483 NPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSID 542 NP+ + +LQ M++LVGIIR DE+ AL L ++ +R V VEGHRQ+NPGW+L++D Sbjct 480 NPFVVQQELQKTMHELVGIIRKGDEMEMALKKLEDIATRTRTVSVEGHRQFNPGWHLALD 539 Query 543 LRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGDS 602 LRNMLLVS CV +AAL+R ESRGGHTRDDHP MD +WR +LLVC A G+ Sbjct 540 LRNMLLVSLCVGKAALERQESRGGHTRDDHPVMDSDWRHLLLVCSAL----------GED 589 Query 603 NCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEH 641 N + +T+Q Q MR DL +LFE+ EL+KYYT +EL H Sbjct 590 N--VELTRQEQIAMRSDLFDLFEMDELKKYYTGDELGGH 626 >gi|337767941|emb|CCB76654.1| Succinate dehydrogenase flavoprotein subunit [Streptomyces cattleya NRRL 8057] Length=645 Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/647 (75%), Positives = 535/647 (83%), Gaps = 10/647 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M +VERH+YDVVV+GAGGAGLRA +EARE+GL+ AV+CKSLFGKAHTVMAEGG AA+MGN Sbjct 1 MTQVERHTYDVVVVGAGGAGLRAAVEAREQGLRTAVICKSLFGKAHTVMAEGGIAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 ANP D+W+ HF DTMRGGKFLN+WRMAELHA+EAPDRVWELET+GALFDRT DGRISQRN Sbjct 61 ANPHDDWRVHFRDTMRGGKFLNHWRMAELHAQEAPDRVWELETWGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQKVVSLQQEDH GDYEAR+KVF ECT+T ++KD Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHRATGDYEARLKVFQECTVTRIVKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 +AG FGY RESGRF + EAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAL AGA L Sbjct 181 GEKVAGVFGYVRESGRFFLIEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWP SVKGILVTE VRGDGGVL+NSE RFMF Y+P VFK +YA++E Sbjct 241 INMEFVQFHPTGMVWPLSVKGILVTESVRGDGGVLRNSEGKRFMFGYVPDVFKEKYAQSE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EEAD W D + RR P+LLPRDEVARAIN+EVKAGRG+PHGGV+LD++SR+ EIKRR Sbjct 301 EEADGWYTDPERHRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSSRMPAEEIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAAGECAGGMH 419 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGGV+VD DT AAT VPGLFAAGE AGGMH Sbjct 361 LPSMYHQFKELADVDITAEPMEVGPTCHYVMGGVDVDPDTAAATAVPGLFAAGEVAGGMH 420 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYVRALSS--RPAVSAEAIDAAAQQALSPFEGPKD 477 GSNRLGGNSLSDLLVFGRRAGL AA Y AL++ RP V+ E ID AA +AL PF Sbjct 421 GSNRLGGNSLSDLLVFGRRAGLHAARYAAALTTGQRPRVTDEQIDLAAAEALRPFSAEAQ 480 Query 478 ----GSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQY 533 G PENPYALH +LQ MNDLVGIIR E+ AL LA L +R +V VEGHRQ+ Sbjct 481 AGDAGGRPENPYALHQELQQTMNDLVGIIRRDAEMREALHRLAALRTRSRSVGVEGHRQF 540 Query 534 NPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMG 593 NPGW+L++DLRNMLLVSECVARAAL+RTESRGGHTRDD+P MD WRR LVC+ + Sbjct 541 NPGWHLALDLRNMLLVSECVARAALERTESRGGHTRDDYPEMDRRWRRSNLVCQLADP-- 598 Query 594 TGGSGSGDSNC-HINVTQQLQTPMRPDLLELFEISELEKYYTDEELA 639 TG + D I +T++ P+RPDLL LFE EL KY TDEELA Sbjct 599 TGELAAADPLVGQIRLTRRDMPPIRPDLLALFEKDELLKYLTDEELA 645 >gi|345009078|ref|YP_004811432.1| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein [Streptomyces violaceusniger Tu 4113] gi|344035427|gb|AEM81152.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Streptomyces violaceusniger Tu 4113] Length=651 Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/653 (73%), Positives = 537/653 (83%), Gaps = 15/653 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M +VER ++DVVVIGAGGAGLRA IEARE+G++ AV+CKSLFGKAHTVMAEGG AA+MGN Sbjct 1 MTQVERQAWDVVVIGAGGAGLRAAIEAREQGMRCAVICKSLFGKAHTVMAEGGIAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N +DNW+ HF DTMRGGKFLN+WRMAELHA+EAPDRVWELET+GALFDRT +G+ISQRN Sbjct 61 VNERDNWQVHFRDTMRGGKFLNHWRMAELHAQEAPDRVWELETWGALFDRTPEGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+VSLQQED AE GDYE+R+KVF ECT+T ++KD Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDKAETGDYESRLKVFQECTVTRIVKD 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 +AG FGY RESGRF EAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAL AGA L Sbjct 181 GDRVAGVFGYERESGRFFAIEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 INMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDYIP VFK +YA++E Sbjct 241 INMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYIPDVFKEKYAQSE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EAD+W +D D+ RR P+LLPRDEVARAIN+EVKAGRG+PHGGV+LD+++R++P IKRR Sbjct 301 GEADRWYEDPDNNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSTRMSPEVIKRR 360 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAAGECAGGMH 419 LPSM+HQFKELA+VDIT + MEVGPTCHYVMGGV+VD DT AAT VPGLFAAGE AGGMH Sbjct 361 LPSMHHQFKELADVDITAEPMEVGPTCHYVMGGVDVDPDTAAATGVPGLFAAGEVAGGMH 420 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYVR---ALSSRPAVSAEAIDAAAQQALSPFE--- 473 GSNRLGGNSLSDLLVFGRRAGL AA Y + A +RP +D AA +AL PF Sbjct 421 GSNRLGGNSLSDLLVFGRRAGLHAARYAQETAASGTRPVPDETQLDLAAAEALRPFSAEA 480 Query 474 GPKDGSA-----PENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVE 528 G D SA PENPY LH +LQ MNDLVGIIR A E+ AL LA L R VE Sbjct 481 GEPDESAGPAGPPENPYTLHQELQQSMNDLVGIIRKAGEMEEALHRLASLRVRARRAGVE 540 Query 529 GHRQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRA 588 GHRQ+NPGW+L+IDLRNMLLVSECVARAAL+RTESRGGHTRDD P MD WRR+ LVCR Sbjct 541 GHRQFNPGWHLAIDLRNMLLVSECVARAALERTESRGGHTRDDCPEMDREWRRLNLVCRL 600 Query 589 TETMGTGGSGSGDS-NCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 ++ +GG + D+ + I + ++ P+RPDLL LFE EL KY TDEEL + Sbjct 601 SDP--SGGLAAPDTGHGQIRLERRETPPIRPDLLNLFEKDELVKYLTDEELTQ 651 >gi|297192295|ref|ZP_06909693.1| succinate dehydrogenase flavoprotein subunit [Streptomyces pristinaespiralis ATCC 25486] gi|297151289|gb|EDY63629.2| succinate dehydrogenase flavoprotein subunit [Streptomyces pristinaespiralis ATCC 25486] Length=648 Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/647 (74%), Positives = 536/647 (83%), Gaps = 7/647 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E+ER +DVVV+GAGGAGLRA IEARERG + AV+CKSLFGKAHTVMAEGG AA+MGN Sbjct 2 MTELERQQWDVVVVGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAASMGN 61 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N DNW+ HF DTMRGGKFLN WRMAELHA+EAPDRVWELET+GALFDRT DGRISQRN Sbjct 62 VNAGDNWQVHFRDTMRGGKFLNQWRMAELHAREAPDRVWELETWGALFDRTADGRISQRN 121 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+VSLQQED ELGDYEA +KVF ECT+T +LK Sbjct 122 FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDKRELGDYEAGLKVFQECTVTRVLKR 181 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 G + G F Y RESGRF V EAP+VVLATGGIGKSFKVTSNSWEYTGDGHALAL AGA L Sbjct 182 DGRVCGVFCYERESGRFFVLEAPSVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL 241 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 +NMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDY+P VFK +YA++E Sbjct 242 VNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYVPDVFKEKYAQSE 301 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 +E D+W +D D+ RR P+LLPRDEVARAINSEVKAGRG+PHGGV+LD+++R+ I+RR Sbjct 302 DEGDRWYEDPDNNRRPPELLPRDEVARAINSEVKAGRGSPHGGVFLDVSTRMPADVIRRR 361 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADT-GAATVPGLFAAGECAGGMH 419 LPSMYHQFKELA+VDIT +AMEVGPTCHYVMGG+ V++DT GA VPGLFAAGE AGGMH Sbjct 362 LPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVESDTAGALGVPGLFAAGEVAGGMH 421 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPF--EGPKD 477 GSNRLGGNSLSDLLVFGRRAGL AA+Y + L +RPAV IDAAA +AL PF EGP+ Sbjct 422 GSNRLGGNSLSDLLVFGRRAGLHAAEYAQRLPARPAVDEAQIDAAAAEALRPFSAEGPEA 481 Query 478 GSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGW 537 G+APENPY LH +LQ MNDLVGIIR A E+ +ALT LAEL R VEGHRQ+NPGW Sbjct 482 GAAPENPYTLHQELQQTMNDLVGIIRRAGEMEQALTKLAELRERASRAGVEGHRQFNPGW 541 Query 538 NLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATE----TMG 593 +LS+DLRNMLLVSEC+ARAAL+RTESRGGHTR+D PGMD WRR+ LVCR + T Sbjct 542 HLSLDLRNMLLVSECIARAALERTESRGGHTREDCPGMDREWRRVNLVCRLRQDDDATAA 601 Query 594 TGGSGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 G +G+ + I + ++ P+R DLL LFE EL KY +EEL E Sbjct 602 AGATGATGATGRIRLERRTSEPIRADLLALFEKEELIKYLAEEELTE 648 >gi|297157548|gb|ADI07260.1| succinate dehydrogenase flavoprotein subunit [Streptomyces bingchenggensis BCW-1] Length=654 Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/655 (72%), Positives = 521/655 (80%), Gaps = 16/655 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M +VER S+DVVVIGAGGAGLRA IEARE+G + AV+CKSLFGKAHTVMAEGG AA+MGN Sbjct 1 MTQVERQSWDVVVIGAGGAGLRAAIEAREQGKRCAVICKSLFGKAHTVMAEGGIAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N DNW+ HF DTMRGGKFLN+WRMAELHA+EAPDRVWELET+GALFDRT DG+ISQRN Sbjct 61 VNEGDNWQVHFRDTMRGGKFLNHWRMAELHAQEAPDRVWELETWGALFDRTPDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+VSLQQED AE GDYEAR+KVF ECT+T +LKD Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDKAEFGDYEARLKVFQECTVTRVLKD 180 Query 181 QGA--IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238 + +AG FGY RESGRF EAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAL AGA Sbjct 181 EAGERVAGVFGYERESGRFFTIEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGA 240 Query 239 TLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAE 298 L+NMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMF YIP VFK +YA+ Sbjct 241 PLVNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFGYIPDVFKEKYAQ 300 Query 299 TEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIK 358 TE+E D+W +D D RR P+LLPRDEVARAINSEVKAGRG+PHGGV+LD+++R+ IK Sbjct 301 TEDEGDRWYEDPDHNRRPPELLPRDEVARAINSEVKAGRGSPHGGVFLDVSTRMPAEVIK 360 Query 359 RRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAAGECAGG 417 RRLPSM+HQFKELA+VDIT + MEVGPTCHYVMGGV+VD DT AAT VPGLFAAGE AGG Sbjct 361 RRLPSMHHQFKELADVDITAEPMEVGPTCHYVMGGVDVDPDTTAATGVPGLFAAGEVAGG 420 Query 418 MHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSR---PAVSAEAIDAAAQQALSPF-- 472 MHGSNRLGGNSLSDLLVFGRRAGL AA Y +S P ID AA +AL PF Sbjct 421 MHGSNRLGGNSLSDLLVFGRRAGLHAARYAEETASSGALPTPDDAQIDLAAAEALRPFSA 480 Query 473 -------EGPKDGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNV 525 P+ ENPY LH +LQ MNDLVGIIR A E+ AL L L R Sbjct 481 EGGDPSSRAPRSTVPAENPYTLHQELQQTMNDLVGIIRKAGEMEEALHRLTALRVRARRA 540 Query 526 LVEGHRQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLV 585 VEGHRQ+NPGW+L+IDLRNMLLVSECVARAAL+RTESRGGHTRDD+P MD WR + LV Sbjct 541 GVEGHRQFNPGWHLAIDLRNMLLVSECVARAALERTESRGGHTRDDYPEMDREWRPVNLV 600 Query 586 CRATETMGTGGSGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 CR + G + I + ++L P+RPDLL LFE EL KY TDEEL + Sbjct 601 CRLADPSGEPAAPDA-RQGQIRLERRLTPPIRPDLLGLFEKDELVKYLTDEELTQ 654 >gi|290957635|ref|YP_003488817.1| succinate dehydrogenase flavoprotein subunit [Streptomyces scabiei 87.22] gi|260647161|emb|CBG70260.1| putative succinate dehydrogenase flavoprotein subunit [Streptomyces scabiei 87.22] Length=649 Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/651 (72%), Positives = 527/651 (81%), Gaps = 13/651 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M VER +DVVVIGAGGAGLRA IEARERG + AV+CKSLFGKAHTVMAEGG AAAMGN Sbjct 1 MSVVERQEWDVVVIGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N D W+ HF DTMRGGKFLN WRMAELHA+EAPDRVWELET+GALFDRT DGRISQRN Sbjct 61 VNSGDGWQVHFRDTMRGGKFLNQWRMAELHAREAPDRVWELETWGALFDRTKDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+V+LQQEDH E GDYE+R+KVF ECT+T +LKD Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKIVALQQEDHKETGDYESRLKVFQECTVTRVLKD 180 Query 181 Q--GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238 G ++G FGY RESGRF V EAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALAL AGA Sbjct 181 GDGGRVSGVFGYERESGRFFVLEAPAVVVATGGIGKSFKVTSNSWEYTGDGHALALLAGA 240 Query 239 TLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAE 298 L+NMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDY+P VFK +YAE Sbjct 241 PLLNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYVPDVFKEKYAE 300 Query 299 TEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIK 358 +E E D+W +D D RR P+LLPRDEVARAIN+EVKAGRG+PHGGV+LD+++R+ I+ Sbjct 301 SEAEGDRWYEDPDHNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSTRMPAETIR 360 Query 359 RRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAAGECAGG 417 RRLPSMYHQFKELA+VDIT +AMEVGPTCHYVMGG+ V++DT AA VPGLFAAGE AGG Sbjct 361 RRLPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVESDTAAARGVPGLFAAGEVAGG 420 Query 418 MHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSS-RPAVSAEAIDAAAQQALSPF--EG 474 MHGSNRLGGNSLSDLLVFGRRAG AA Y LS RP V +D AA +AL PF EG Sbjct 421 MHGSNRLGGNSLSDLLVFGRRAGQHAAAYTAGLSGPRPPVHDTEVDTAAAEALRPFSAEG 480 Query 475 PKD----GSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGH 530 P+ G PENPY LH +LQ MNDLVGIIR E+ +AL LA+L R VEGH Sbjct 481 PQPGLEAGRPPENPYTLHQELQQAMNDLVGIIRREGEMEQALEKLADLRVRARRAGVEGH 540 Query 531 RQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATE 590 RQ+NPGW+L++DLRNMLLVSECVARAAL+RTESRGGHTR+D P MD WRRI L+CR ++ Sbjct 541 RQFNPGWHLALDLRNMLLVSECVARAALERTESRGGHTREDRPTMDRAWRRINLLCRLSD 600 Query 591 TMGTGGSGSGDSNC-HINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 TGG + D I +T++ +RPDLL LF+ EL KY +EEL E Sbjct 601 P--TGGPETWDPAVGQIALTRETTEAIRPDLLALFDKEELVKYLAEEELYE 649 >gi|269125369|ref|YP_003298739.1| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310327|gb|ACY96701.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Thermomonospora curvata DSM 43183] Length=643 Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/641 (73%), Positives = 523/641 (82%), Gaps = 16/641 (2%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M E+ERHSYDVVVIGAGG+GLRA IEAR +G K AV+ KSLFGKAHTVMAEGG AAAMGN Sbjct 1 MTEIERHSYDVVVIGAGGSGLRAAIEARLQGKKTAVISKSLFGKAHTVMAEGGAAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 NP DNWK HF DTMRGGKFLNNWRMAELHAKEAPDR+WELE +GALFDRT DG+ISQRN Sbjct 61 VNPNDNWKVHFRDTMRGGKFLNNWRMAELHAKEAPDRIWELEHWGALFDRTKDGKISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQKVV+LQQEDH + GDYEA +KV+ E TIT LL Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKVVALQQEDHRDHGDYEAYLKVWPETTITRLLVK 180 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 G IAGAFGY RE+G+F+VFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAL AGATL Sbjct 181 GGKIAGAFGYVRETGKFVVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGATL 240 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 +NMEFVQFHPTGMVWPPSVKGILVTE VRGD G+L NSE RFMFDYIP VFK +YA TE Sbjct 241 LNMEFVQFHPTGMVWPPSVKGILVTESVRGDRGILLNSEGRRFMFDYIPEVFKEKYATTE 300 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLT--PAEIK 358 EEAD+W D D+ RR P+LLPRDEVARAIN+EVKAGRG+PHGGV+L + R+ EIK Sbjct 301 EEADRWYDDPDNNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLTVVGRMPGGAEEIK 360 Query 359 RRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGM 418 RRLP+M+HQFKELA+VDIT + MEVGPTCHYVMGGVEVD DT AA VPGLFAAGEC+GGM Sbjct 361 RRLPAMHHQFKELADVDITKEPMEVGPTCHYVMGGVEVDPDTAAAVVPGLFAAGECSGGM 420 Query 419 HGSNRLGGNSLSDLLVFGRRAGLGAADYVRAL-SSRPAVSAEAIDAAAQQALSPFEGPKD 477 HGSNRLGGNSLSDLLVFGRRAGLGAA+YV +L RP E ID A +AL+PFE + Sbjct 421 HGSNRLGGNSLSDLLVFGRRAGLGAAEYVDSLGDDRPVPDQEEIDYAVAEALAPFE--RK 478 Query 478 GSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGW 537 G E+PYA+H DLQ MNDLVGIIR E+ AL L EL +R V VEG + YNP W Sbjct 479 GG--ESPYAVHADLQQTMNDLVGIIRTEKELQLALEKLEELRARAAKVSVEGGKGYNPAW 536 Query 538 NLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGS 597 +L++DLRNMLLVSEC+A+AAL+RTESRGGHTR+D+P M P WR++ L+CR Sbjct 537 HLALDLRNMLLVSECIAKAALERTESRGGHTREDYPQMSPEWRKVNLICRLV-------- 588 Query 598 GSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEEL 638 G D + + + +Q PMR DLL LF++ EL+KY T EEL Sbjct 589 GKAD-DPRVEIKRQEMEPMREDLLALFDVEELKKYMTPEEL 628 >gi|258654151|ref|YP_003203307.1| succinate dehydrogenase flavoprotein subunit [Nakamurella multipartita DSM 44233] gi|258557376|gb|ACV80318.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Nakamurella multipartita DSM 44233] Length=646 Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/649 (72%), Positives = 529/649 (82%), Gaps = 27/649 (4%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M ++E H YDVV++GAGGAGLRA I ARE G++ A+VCKSLFGKAHTVMAEGG AA+MGN Sbjct 1 MTDLEEHRYDVVIVGAGGAGLRAAIAAREAGMRTAIVCKSLFGKAHTVMAEGGIAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 AN KD+W+ HF DTMRGGKFLN+ RMAELHA+EAPDRVWELETYGALFDRT DGRISQRN Sbjct 61 ANSKDSWQVHFRDTMRGGKFLNHPRMAELHAQEAPDRVWELETYGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQ-EDHAELG-------DYEARIKVFAEC 172 FGGH YPRLAHVGDRTGLELIRTLQQK+VSL+Q ED+A D +A ++VFAE Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLRQDEDNAATAAGGEPPADEDAGLRVFAEV 180 Query 173 TITELLKDQ-GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHA 231 TITELL+D+ GAIAGAFGY RE+G F+VF APAV+LATGGIGKSFKVTSNSWEYTGDG+A Sbjct 181 TITELLRDETGAIAGAFGYRRETGTFVVFHAPAVILATGGIGKSFKVTSNSWEYTGDGNA 240 Query 232 LALRAGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPV 291 LALRAG+TL+NMEF+QFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDY+P V Sbjct 241 LALRAGSTLVNMEFIQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYVPDV 300 Query 292 FKGQYAETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASR 351 F+ +YAETEEEAD W KD ++ RR P+LLPRDEVARAINSEVKAGR TPHGGV+LD+++R Sbjct 301 FRSKYAETEEEADGWYKDPENHRRPPELLPRDEVARAINSEVKAGRQTPHGGVFLDVSTR 360 Query 352 LTPAEIKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFA 410 L EIKRRLPSM+HQF ELA+VDIT + MEVGPTCHYVMGG++VD DT AA VPGLFA Sbjct 361 LPAEEIKRRLPSMHHQFSELADVDITNEPMEVGPTCHYVMGGIQVDPDTAAAARVPGLFA 420 Query 411 AGECAGGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRAL-SSRPAVSAEAIDAAAQQAL 469 GE AGGMHGSNRLGGNSLSDLLVFGRRAGLGAA+YV L + P + +I+AAA+ AL Sbjct 421 CGEVAGGMHGSNRLGGNSLSDLLVFGRRAGLGAAEYVTGLGDALPVPAVGSIEAAARSAL 480 Query 470 SPFEGPKDGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEG 529 +PF+ +DG ENPY LH +LQ MNDLVGIIR EI RA+ LA + R V VEG Sbjct 481 APFDR-EDG---ENPYTLHRELQQTMNDLVGIIRKESEIERAIQSLAAMKPRVAAVSVEG 536 Query 530 HRQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRAT 589 HRQ+NPGW+L++DL NML VSECVA+AAL R ESRGGHTRDD+P M +WRR LL+C Sbjct 537 HRQFNPGWHLALDLVNMLQVSECVAKAALIRQESRGGHTRDDYPQMSADWRRRLLICALD 596 Query 590 ETMGTGGSGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEEL 638 G GG + V + TP+RPDLL LFE SEL KY T++EL Sbjct 597 ---GAGG---------VTVQPEPITPIRPDLLALFERSELAKYLTEDEL 633 >gi|302542784|ref|ZP_07295126.1| putative FAD flavoprotein oxidase [Streptomyces hygroscopicus ATCC 53653] gi|302460402|gb|EFL23495.1| putative FAD flavoprotein oxidase [Streptomyces himastatinicus ATCC 53653] Length=661 Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/662 (71%), Positives = 527/662 (80%), Gaps = 23/662 (3%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M +VER ++DVVVIGAGGAGLRA IEARE G++ AV+CKSLFGKAHTVMAEGG AA+MGN Sbjct 1 MTQVERQAWDVVVIGAGGAGLRAAIEAREAGMRCAVICKSLFGKAHTVMAEGGIAASMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N DNW+ HF DTMRGGKFLN+WRMAELHA+EAPDRVWELET+GALFDRT DGRISQRN Sbjct 61 VNEGDNWQVHFRDTMRGGKFLNHWRMAELHAQEAPDRVWELETWGALFDRTPDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+VSLQQEDHAE GDYEAR+KVF ECT+T ++KD Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDHAETGDYEARLKVFQECTVTRIVKD 180 Query 181 QGA--IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238 +AG FGY RESGRF EAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAL AGA Sbjct 181 AAGEKVAGVFGYERESGRFFAIEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGA 240 Query 239 TLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAE 298 LINMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDYIP VFK +YA+ Sbjct 241 PLINMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYIPDVFKEKYAQ 300 Query 299 TEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIK 358 +E+E D+W +D D RR P+LLPRDEVARAINSEVKAGRG+PHGGV+LD+++R+ IK Sbjct 301 SEDEGDRWYEDPDHNRRPPELLPRDEVARAINSEVKAGRGSPHGGVFLDVSTRMPAEVIK 360 Query 359 RRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAAGECAGG 417 RRLPSM+HQFKELA+VDIT + MEVGPTCHYVMGGV+VD DT AA+ VPGLFAAGE AGG Sbjct 361 RRLPSMHHQFKELADVDITAEPMEVGPTCHYVMGGVDVDPDTAAASGVPGLFAAGEVAGG 420 Query 418 MHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALS---SRPAVSAEAIDAAAQQALSPFEG 474 MHGSNRLGGNSLSDLLVFGRRAGL AA Y + + +RP +D AA +AL PF Sbjct 421 MHGSNRLGGNSLSDLLVFGRRAGLHAARYAQEAAASGTRPVPDDAQLDLAAAEALRPFSA 480 Query 475 PKDGSAP----------------ENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAEL 518 +DG P ENPY LH +LQ MNDLVGIIR A E+ AL LA L Sbjct 481 -EDGELPSAVSAGSAAEQPAGPAENPYTLHQELQQTMNDLVGIIRRAGEMEDALHRLAAL 539 Query 519 WSRYHNVLVEGHRQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPN 578 R VEGHRQ+NPGW+L+IDLRNMLLVSECVARAAL+RTESRGGHTRDD P MD Sbjct 540 RVRARRAGVEGHRQFNPGWHLAIDLRNMLLVSECVARAALERTESRGGHTRDDCPEMDRE 599 Query 579 WRRILLVCRATETMGTGGSGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEEL 638 WRR+ LVCR ++ + + I + ++ P+RPDLL LFE EL KY TDEEL Sbjct 600 WRRVNLVCRLSDPSAGLAAPTDPGRGQIRLERRETPPIRPDLLNLFEKDELVKYLTDEEL 659 Query 639 AE 640 + Sbjct 660 TQ 661 >gi|238060961|ref|ZP_04605670.1| succinate dehydrogenase flavoprotein subunit [Micromonospora sp. ATCC 39149] gi|237882772|gb|EEP71600.1| succinate dehydrogenase flavoprotein subunit [Micromonospora sp. ATCC 39149] Length=638 Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/639 (73%), Positives = 521/639 (82%), Gaps = 19/639 (2%) Query 4 VERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANP 63 +ERH YDVVVIGAGGAGLRA IEAR G K A++ KSLFGKAHTVMAEGG AAAMGN N Sbjct 7 IERHHYDVVVIGAGGAGLRAAIEARLAGKKTAIISKSLFGKAHTVMAEGGAAAAMGNVNS 66 Query 64 KDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGG 123 +DNW+ HF DTMRGGKFLNN+RMAELHAKE+P R+WELETYGALFDRT DG+ISQRNFGG Sbjct 67 RDNWQVHFRDTMRGGKFLNNFRMAELHAKESPQRIWELETYGALFDRTKDGKISQRNFGG 126 Query 124 HTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGA 183 H YPRLAHVGDRTGLELIRTLQQK+VSLQQED AE G Y+ARIKVFAE TITELL D Sbjct 127 HEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDKAEFGSYDARIKVFAETTITELLLDGEK 186 Query 184 IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINM 243 +AGAFGY+RESG FI+FEAPAVVLATGG+G+S+KVTSNSWEYTGDGHALALRAGATLINM Sbjct 187 VAGAFGYYRESGEFILFEAPAVVLATGGVGRSYKVTSNSWEYTGDGHALALRAGATLINM 246 Query 244 EFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEA 303 EF+QFHPTGMVWPPSVKGILVTE VRGDGGVLKNS+ RFMFDY+P VF+ QYA+ E EA Sbjct 247 EFLQFHPTGMVWPPSVKGILVTESVRGDGGVLKNSDGKRFMFDYVPDVFRKQYADNEAEA 306 Query 304 DQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPS 363 D+W D D+ RR P+LLPRDEVARAINSEVKAGRGTP GGVYLDIASRL EI+RRLPS Sbjct 307 DRWYSDPDNNRRPPELLPRDEVARAINSEVKAGRGTPAGGVYLDIASRLPAEEIRRRLPS 366 Query 364 MYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAA--TVPGLFAAGECAGGMHGS 421 MYHQFKELA+VDIT + MEVGPTCHYVMGGVEVD D+GAA TV GLFAAGE +GGMHGS Sbjct 367 MYHQFKELADVDITKEPMEVGPTCHYVMGGVEVDPDSGAAYGTVRGLFAAGEVSGGMHGS 426 Query 422 NRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAP 481 NRLGGNSLSDLLVFG+RAG AA Y L+SRP VS A++AA + AL+P + +D Sbjct 427 NRLGGNSLSDLLVFGKRAGGHAASYADQLTSRPKVSIGAVEAAVETALAPLQ--RDTG-- 482 Query 482 ENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSI 541 ENPY L DLQ VM DLVGIIR E+ AL LAEL R V G R+YNPGW+L++ Sbjct 483 ENPYQLQQDLQAVMGDLVGIIRREGELVDALHRLAELRERVAKVSAAGGRRYNPGWHLAL 542 Query 542 DLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGD 601 DLRNML+VSEC A+AAL+R ESRGGHTR+D P MDP WRR+ LVC + GD Sbjct 543 DLRNMLVVSECTAKAALERQESRGGHTREDFPAMDPKWRRVNLVC----------ALDGD 592 Query 602 SNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 + + +T + +R +L+ LF+ +EL KY TDEELA+ Sbjct 593 T---VRLTHKPLPKIRAELIALFDRAELAKYLTDEELAD 628 >gi|330470012|ref|YP_004407755.1| succinate dehydrogenase flavoprotein subunit [Verrucosispora maris AB-18-032] gi|328812983|gb|AEB47155.1| succinate dehydrogenase flavoprotein subunit [Verrucosispora maris AB-18-032] Length=648 Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/636 (73%), Positives = 518/636 (82%), Gaps = 19/636 (2%) Query 4 VERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANP 63 +ERH YDVVVIGAGGAGLRA IEAR G K A++ KSLFGKAHTVMAEGG AAAMGN N Sbjct 8 IERHHYDVVVIGAGGAGLRAAIEARLAGKKTAIISKSLFGKAHTVMAEGGAAAAMGNVNS 67 Query 64 KDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGG 123 +DNW+ HF DTMRGGKFLNN+RMAELHAKEAP R+WELETYGALFDRT DG+ISQRNFGG Sbjct 68 RDNWQVHFRDTMRGGKFLNNFRMAELHAKEAPQRIWELETYGALFDRTKDGKISQRNFGG 127 Query 124 HTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGA 183 H YPRLAHVGDRTGLELIRTLQQK+VSLQQED E G Y+ARI+VF+E TITELL D Sbjct 128 HEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDKQEFGSYDARIRVFSETTITELLLDGDR 187 Query 184 IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINM 243 +AGAFGY+RESG F++FEAPAVVLATGG+G+S+KVTSNSWEYTGDGHALALRAGATLINM Sbjct 188 VAGAFGYYRESGEFVLFEAPAVVLATGGVGRSYKVTSNSWEYTGDGHALALRAGATLINM 247 Query 244 EFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEA 303 EF+QFHPTGMVWPPSVKGILVTE VRGDGG+LKNSE RFMFDY+P VF+ QYAETEEEA Sbjct 248 EFLQFHPTGMVWPPSVKGILVTESVRGDGGILKNSEGKRFMFDYVPDVFRKQYAETEEEA 307 Query 304 DQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPS 363 D+W D D+ RR P+LLPRDEVARAINSEVKAGRGTP GGVYLDIASRL EI+RRLPS Sbjct 308 DRWYTDPDNNRRPPELLPRDEVARAINSEVKAGRGTPAGGVYLDIASRLPAEEIRRRLPS 367 Query 364 MYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAA--TVPGLFAAGECAGGMHGS 421 M+HQFK LA+VDIT + MEVGPTCHYVMGGVEVD DTGAA +V GLFAAGE +GGMHGS Sbjct 368 MHHQFKGLADVDITKEPMEVGPTCHYVMGGVEVDPDTGAAYGSVRGLFAAGEVSGGMHGS 427 Query 422 NRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAP 481 NRLGGNSLSDLLVFG+RAG AA+YV L+ RP V A++ A + AL+P + +D Sbjct 428 NRLGGNSLSDLLVFGKRAGGHAANYVDQLTGRPRVEVTAVETAVETALAPLQ--RDTG-- 483 Query 482 ENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSI 541 ENPY L DLQ VM DLVGIIR E+ AL LAEL R V G R+YNPGW+L++ Sbjct 484 ENPYTLQQDLQAVMGDLVGIIRREAELEDALVRLAELRERVAKVSAAGGRRYNPGWHLAL 543 Query 542 DLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGD 601 DLRNML+VSEC A+AAL+R ESRGGHTR+DHP MDP WRR+ LVC S GD Sbjct 544 DLRNMLVVSECTAKAALERRESRGGHTREDHPTMDPQWRRVNLVC----------SLEGD 593 Query 602 SNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEE 637 + + + ++ MR +L+ LF+ +EL KY TDEE Sbjct 594 T---VRLDRKPLPKMRAELIALFDRAELAKYLTDEE 626 >gi|296271006|ref|YP_003653638.1| succinate dehydrogenase [Thermobispora bispora DSM 43833] gi|296093793|gb|ADG89745.1| Succinate dehydrogenase [Thermobispora bispora DSM 43833] Length=633 Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/638 (75%), Positives = 520/638 (82%), Gaps = 15/638 (2%) Query 4 VERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANP 63 +ERH YDVVVIGAGGAGLRA IEAR++G + A+VCKSLFGKAHTVMAEGG AAAMGN NP Sbjct 1 MERHEYDVVVIGAGGAGLRAAIEARQQGKRTAIVCKSLFGKAHTVMAEGGAAAAMGNVNP 60 Query 64 KDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGG 123 DNW HF DTMRGGKFLNNWRMAELHAKEAP+RVWELE +GALFDRT DG+ISQRNFGG Sbjct 61 NDNWMVHFRDTMRGGKFLNNWRMAELHAKEAPERVWELEAWGALFDRTKDGKISQRNFGG 120 Query 124 HTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGA 183 H YPRLAHVGDRTGLELIRTLQQ+VV+LQQED GD EA IKVF E TIT LLKD Sbjct 121 HEYPRLAHVGDRTGLELIRTLQQRVVALQQEDQRLHGDPEAYIKVFPETTITRLLKDGDR 180 Query 184 IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINM 243 IAGAFGY R++G FIVFEAPAVVLATGGIGKS+ VTSNSWEYTGDGHALAL AGA LINM Sbjct 181 IAGAFGYRRQTGEFIVFEAPAVVLATGGIGKSYAVTSNSWEYTGDGHALALLAGAGLINM 240 Query 244 EFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEA 303 EF+QFHPTGMVWPPSV+GILVTE VRGDGGVL+NSE RFMFDYIP VFK +YA TEEEA Sbjct 241 EFIQFHPTGMVWPPSVRGILVTESVRGDGGVLRNSEGRRFMFDYIPEVFKDKYATTEEEA 300 Query 304 DQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPS 363 D+W D + RR P+LLPRDEVARAIN+EVKAGRG+ HGGVYLD+++RL+P EIKRRLPS Sbjct 301 DRWYTDQANNRRPPELLPRDEVARAINAEVKAGRGSEHGGVYLDVSTRLSPEEIKRRLPS 360 Query 364 MYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECAGGMHGSNR 423 MYHQFKELA+VDIT Q MEVGPTCHYVMGGVEVD DT AA+VPGLFAAGE AGGMHGSNR Sbjct 361 MYHQFKELADVDITKQPMEVGPTCHYVMGGVEVDPDTAAASVPGLFAAGEVAGGMHGSNR 420 Query 424 LGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAPEN 483 LGGNSLSDLLVFG RAG GAA YV L RP VS E+I+AA +AL+P E K G EN Sbjct 421 LGGNSLSDLLVFGCRAGAGAAAYVDKLDKRPKVSEESIEAAKAEALAPLER-KTG---EN 476 Query 484 PYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSIDL 543 PY +H +LQ MNDLVGIIR ADE++ AL + +L R N G R YNP W+L++DL Sbjct 477 PYEVHQELQRTMNDLVGIIRRADEMTEALQAIEKLKERAKNTAPAGGRVYNPSWHLALDL 536 Query 544 RNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGDSN 603 RNMLLVSEC+ARAAL R ESRGGHTRDD P M P WRR LLVC A SN Sbjct 537 RNMLLVSECIARAALMREESRGGHTRDDFPKMSPEWRRRLLVCTAD---------PDGSN 587 Query 604 CHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAEH 641 I V ++Q MRPDLL LFE SELEKY T+EELAE+ Sbjct 588 VKIEV--KIQPSMRPDLLLLFERSELEKYLTEEELAEY 623 >gi|302558614|ref|ZP_07310956.1| FAD flavoprotein oxidase [Streptomyces griseoflavus Tu4000] gi|302476232|gb|EFL39325.1| FAD flavoprotein oxidase [Streptomyces griseoflavus Tu4000] Length=649 Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/646 (72%), Positives = 527/646 (82%), Gaps = 8/646 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M V+R +DVVV+GAGGAGLRA +EARERG + AV+CKSLFGKAHTVMAEGG AAAMGN Sbjct 6 MSVVDRQEWDVVVVGAGGAGLRAAVEARERGARTAVICKSLFGKAHTVMAEGGIAAAMGN 65 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N DNW+ HF DTMRGGKFLN WRMAELHA+EAP RVWELET+GALFDRT DGRISQRN Sbjct 66 VNSGDNWQVHFRDTMRGGKFLNQWRMAELHAQEAPRRVWELETWGALFDRTKDGRISQRN 125 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+V+LQQED E GD+E+R+KVF ECT+T +LK+ Sbjct 126 FGGHEYPRLAHVGDRTGLELIRTLQQKIVALQQEDFRETGDHESRLKVFQECTVTRVLKE 185 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 +G ++G FGY RESGRF V EAPAVV+ATGGIGKSFKVTSNSWEYTGDGHALAL AGA L Sbjct 186 EGQVSGVFGYERESGRFFVLEAPAVVIATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL 245 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 +NMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDYIP VFK +YAE+E Sbjct 246 LNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYIPDVFKEKYAESE 305 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EE D+W D D RR P+LLPRDEVARAIN+EVKAGRG+PHGGV+LD+++R+ I+RR Sbjct 306 EEGDRWYDDPDHNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSTRMPAEVIRRR 365 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAAGECAGGMH 419 LPSMYHQFKELA+VDIT +AMEVGPTCHYVMGG+ VD+D+ AA VPGLFAAGE AG MH Sbjct 366 LPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVDSDSAAARGVPGLFAAGEVAGVMH 425 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYV-RALSSRPAVSAEAIDAAAQQALSPFEG---- 474 GSNRLGGNSLSDLLVFGRRAGL AA+Y RA + RP V +DAAA +AL PF Sbjct 426 GSNRLGGNSLSDLLVFGRRAGLHAAEYASRAGAPRPRVDDAQVDAAAAEALRPFSAEGGE 485 Query 475 PKDGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYN 534 P DG PENPY LH +LQ MNDLVGIIR E+ +AL LAEL R VEGHRQ+N Sbjct 486 PADGP-PENPYTLHQELQQTMNDLVGIIRREHEMEQALRKLAELRVRARRAGVEGHRQFN 544 Query 535 PGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGT 594 PGW+L++DLRNMLLVSECVARAAL+RTESRGGHTR+DH M+ WR + L+C T+ G Sbjct 545 PGWHLALDLRNMLLVSECVARAALERTESRGGHTREDHAAMERTWRNVNLLCALTDPSG- 603 Query 595 GGSGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 G +G+ I +T++ P+RPDLL LFE EL KY +EEL E Sbjct 604 GLAGTDTVRGRIALTRETTEPIRPDLLALFEKEELVKYLAEEELYE 649 >gi|29829723|ref|NP_824357.1| succinate dehydrogenase flavoprotein subunit [Streptomyces avermitilis MA-4680] gi|29606832|dbj|BAC70892.1| putative succinate dehydrogenase flavoprotein subunit (complex II) [Streptomyces avermitilis MA-4680] Length=667 Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/669 (70%), Positives = 530/669 (80%), Gaps = 31/669 (4%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M V+R +DVVV+GAGGAGLRA IEARERG + AV+CKSLFGKAHTVMAEGG AAAMGN Sbjct 1 MPVVDRQEWDVVVVGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAAAMGN 60 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N DNW+ HF DT+RGGKFLN WRMAELHA+EAPDRVWELET+GALFDRT DGRISQRN Sbjct 61 VNSGDNWQVHFRDTLRGGKFLNQWRMAELHAQEAPDRVWELETWGALFDRTKDGRISQRN 120 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+VSLQQED E GDYE+R+KV+ ECT+T +LKD Sbjct 121 FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDERETGDYESRLKVYQECTVTRVLKD 180 Query 181 Q--------GAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHAL 232 G +AG F Y RESGRF V EAP+VV+ATGGIGKSFKVTSNSWEYTGDGHAL Sbjct 181 GAAVSGSAGGRVAGVFCYERESGRFFVLEAPSVVIATGGIGKSFKVTSNSWEYTGDGHAL 240 Query 233 ALRAGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVF 292 AL AGA L+NMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NS+ RFMFDYIP VF Sbjct 241 ALLAGAPLLNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSDGKRFMFDYIPDVF 300 Query 293 KGQYAETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRL 352 K +YA++EEE D+W +D D RR P+LLPRDEVARAINSEVKAGRG+PHGGV+LD+++R+ Sbjct 301 KEKYAQSEEEGDRWYEDPDHNRRPPELLPRDEVARAINSEVKAGRGSPHGGVFLDVSTRM 360 Query 353 TPAEIKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAA 411 I+RRLPSMYHQFKELA+VDIT +AMEVGPTCHYVMGG+ VD+DT AA VPGL+AA Sbjct 361 PAEVIRRRLPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVDSDTAAARGVPGLYAA 420 Query 412 GECAGGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSS--RPAVSAEAIDAAAQQAL 469 GE AGGMHGSNRLGGNSLSDLLVFGRRAGL AA Y L + R V +D AA +AL Sbjct 421 GEVAGGMHGSNRLGGNSLSDLLVFGRRAGLHAAQYAAGLPAGDRTGVDDIQVDTAAAEAL 480 Query 470 SPF--EGPKDGS---------------APENPYALHMDLQYVMNDLVGIIRNADEISRAL 512 PF EGP+ G+ PENPY LH +LQ MNDLVGIIR E+ +AL Sbjct 481 RPFSAEGPEPGADSAGLGDVPRPPGGRPPENPYTLHQELQQTMNDLVGIIRREGEMEQAL 540 Query 513 TLLAELWSRYHNVLVEGHRQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDH 572 LA+L R VEGHRQ+NPGW+L++DLRNMLLVSECVARAAL+RTESRGGHTR+DH Sbjct 541 EKLADLRVRAGRAGVEGHRQFNPGWHLALDLRNMLLVSECVARAALERTESRGGHTREDH 600 Query 573 PGMDPNWRRILLVCRATETMGTGGSGSGD-SNCHINVTQQLQTPMRPDLLELFEISELEK 631 P MD WRRI L+CR + TGG + D + I++T+ P+RPDLL LFE EL K Sbjct 601 PAMDRAWRRINLLCRLADP--TGGLAAMDPARGQIDLTRDTTEPVRPDLLALFEKEELVK 658 Query 632 YYTDEELAE 640 Y +EEL E Sbjct 659 YLAEEELYE 667 >gi|159039678|ref|YP_001538931.1| succinate dehydrogenase flavoprotein subunit [Salinispora arenicola CNS-205] gi|157918513|gb|ABV99940.1| Succinate dehydrogenase [Salinispora arenicola CNS-205] Length=637 Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/639 (73%), Positives = 519/639 (82%), Gaps = 19/639 (2%) Query 4 VERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANP 63 +ERH YDVVVIGAGGAGLRA IEAR G K A++ KSLFGKAHTVMAEGG AAAMGN N Sbjct 7 IERHHYDVVVIGAGGAGLRAAIEARLAGKKTAIISKSLFGKAHTVMAEGGAAAAMGNVNS 66 Query 64 KDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGG 123 +D+W+ HF DTMRGGKFLNN+RMAELHAKE+P R+WELETYGALFDRT DGRISQRNFGG Sbjct 67 RDSWQVHFRDTMRGGKFLNNFRMAELHAKESPQRIWELETYGALFDRTKDGRISQRNFGG 126 Query 124 HTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGA 183 H YPRLAHVGDRTGLELIRTLQQK+VSLQQED E G Y+ARI+VFAE TITELL D Sbjct 127 HEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDLREHGSYDARIRVFAETTITELLLDGDR 186 Query 184 IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINM 243 IAGAFGY+RESG F++FEAPAVVLATGG+G+S+KVTSNSWEYTGDGHALALRAGATLINM Sbjct 187 IAGAFGYYRESGEFVLFEAPAVVLATGGVGRSYKVTSNSWEYTGDGHALALRAGATLINM 246 Query 244 EFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEA 303 EF+QFHPTGMVWPPSVKGILVTE VRGDGGVLKNSE RFMFDY+P VF+ QYA++E EA Sbjct 247 EFLQFHPTGMVWPPSVKGILVTESVRGDGGVLKNSEGKRFMFDYVPDVFRKQYADSEAEA 306 Query 304 DQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPS 363 D+W D D+ RR P+LLPRDEVARAINSEVKAGRGTP GGVYLDIASRL EI+RRLPS Sbjct 307 DRWYDDPDNNRRPPELLPRDEVARAINSEVKAGRGTPAGGVYLDIASRLPAEEIRRRLPS 366 Query 364 MYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT--VPGLFAAGECAGGMHGS 421 MYHQFKELA+VDIT + MEVGPTCHYVMGGVEVD D+GAA V GLFAAGE +GGMHGS Sbjct 367 MYHQFKELADVDITQEPMEVGPTCHYVMGGVEVDPDSGAAFGHVNGLFAAGEVSGGMHGS 426 Query 422 NRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAP 481 NRLGGNSLSDLLVFG+RAG AA Y L+SRP V A++AA + AL+P + +D Sbjct 427 NRLGGNSLSDLLVFGKRAGGHAASYADGLASRPRVPVPAVEAAVETALAPLQ--RDTG-- 482 Query 482 ENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSI 541 ENPYAL DLQ VM DLVGIIR E+ AL+ L EL R V G R+YNPGW+L++ Sbjct 483 ENPYALQQDLQAVMGDLVGIIRREGELVDALSRLGELRERVAKVSAAGGRRYNPGWHLAL 542 Query 542 DLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGD 601 DLRNML+VSEC A+AAL+R ESRGGHTR+DHP MDP WRR+ VC S GD Sbjct 543 DLRNMLVVSECTAKAALERRESRGGHTREDHPAMDPAWRRVNQVC----------SLEGD 592 Query 602 SNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 + + ++ MRP+L LF+ +EL KY TDEELAE Sbjct 593 I---VRLDRKPLPRMRPELFALFDRAELAKYLTDEELAE 628 >gi|291437477|ref|ZP_06576867.1| succinate dehydrogenase flavoprotein subunit [Streptomyces ghanaensis ATCC 14672] gi|291340372|gb|EFE67328.1| succinate dehydrogenase flavoprotein subunit [Streptomyces ghanaensis ATCC 14672] Length=649 Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/645 (72%), Positives = 524/645 (82%), Gaps = 10/645 (1%) Query 1 MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGN 60 M V+R +DVVV+GAGGAGLRA IEARERG + AV+CKSLFGKAHTVMAEGG AAAMGN Sbjct 6 MTVVDRQEWDVVVVGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAAAMGN 65 Query 61 ANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRN 120 N D+W+ HF DT+RGGKFLN WRMAELHA+EAP RVWELET+GALFDRT DGRISQRN Sbjct 66 VNAGDDWRVHFRDTLRGGKFLNQWRMAELHAQEAPQRVWELETWGALFDRTKDGRISQRN 125 Query 121 FGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKD 180 FGGH YPRLAHVGDRTGLELIRTLQQK+V+LQQED E GDYEAR+KVF ECT+T +LK+ Sbjct 126 FGGHEYPRLAHVGDRTGLELIRTLQQKIVALQQEDFRETGDYEARLKVFQECTVTRVLKE 185 Query 181 QGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATL 240 +AG FGY RE+GRF V EAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAL AGA L Sbjct 186 GDQVAGVFGYERETGRFFVLEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL 245 Query 241 INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETE 300 +NMEFVQFHPTGMVWPPSVKGILVTE VRGDGGVL+NSE RFMFDY+P VFK +YAE+E Sbjct 246 LNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYVPDVFKDKYAESE 305 Query 301 EEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRR 360 EE D+W D D RR P+LLPRDEVARAIN+EVKAGRG+PHGGV+LD+++R+ I+RR Sbjct 306 EEGDRWYDDPDHNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSTRMPAEVIRRR 365 Query 361 LPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT-VPGLFAAGECAGGMH 419 LPSMYHQFKELA+VDIT + MEVGPTCHYVMGG+ VD+D+ AA VPGLFAAGE AGGMH Sbjct 366 LPSMYHQFKELADVDITAEPMEVGPTCHYVMGGIAVDSDSAAARGVPGLFAAGEVAGGMH 425 Query 420 GSNRLGGNSLSDLLVFGRRAGLGAADYVRA-LSSRPAVSAEAIDAAAQQALSPF----EG 474 GSNRLGGNSLSDLLVFGRRAGL AA+Y ++RP +DAAA +AL PF E Sbjct 426 GSNRLGGNSLSDLLVFGRRAGLYAAEYAAGRTAARPRADDAQVDAAAAEALRPFSAESEA 485 Query 475 PKDGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYN 534 P +G PENPY LH +LQ MNDLVGIIR E+ +AL LAEL R VEGHRQ+N Sbjct 486 PAEGP-PENPYTLHQELQQAMNDLVGIIRREPEMKQALEKLAELRLRARRAGVEGHRQFN 544 Query 535 PGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGT 594 PGW+L++DLRNMLLVSECVAR+AL+RTESRGGHTR+DH MD WR + L+C T+ T Sbjct 545 PGWHLALDLRNMLLVSECVARSALERTESRGGHTREDHSVMDRAWRNVNLLCELTDP--T 602 Query 595 GGSGSGDS-NCHINVTQQLQTPMRPDLLELFEISELEKYYTDEEL 638 GG + D I +T++ P+RPDLL LFE EL KY T+EEL Sbjct 603 GGLAATDPVRGQITLTRERTEPIRPDLLALFEKEELVKYLTEEEL 647 >gi|145596280|ref|YP_001160577.1| succinate dehydrogenase flavoprotein subunit [Salinispora tropica CNB-440] gi|145305617|gb|ABP56199.1| succinate dehydrogenase subunit A [Salinispora tropica CNB-440] Length=637 Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/639 (72%), Positives = 518/639 (82%), Gaps = 19/639 (2%) Query 4 VERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANP 63 +ERH YDVVVIGAGGAGLRA IEAR G K A++ KSLFGKAHTVMAEGG AAAMGN N Sbjct 7 IERHHYDVVVIGAGGAGLRAAIEARLAGKKTAIISKSLFGKAHTVMAEGGAAAAMGNVNS 66 Query 64 KDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGG 123 +D+W+ HF DTMRGGKFLNN+RMAELHAKE+P R+WELETYGALFDRT DG+ISQRNFGG Sbjct 67 RDSWQVHFRDTMRGGKFLNNFRMAELHAKESPQRIWELETYGALFDRTTDGKISQRNFGG 126 Query 124 HTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGA 183 H YPRLAHVGDRTGLELIRTLQQK+VSLQQED E G Y+ARI+VFAE TITELL D Sbjct 127 HEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDQREHGSYDARIRVFAETTITELLLDGDR 186 Query 184 IAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINM 243 IAGAFGY+RESG F++FEAPAVVLATGG+G+S+KVTSNSWEYTGDGHALALRAGATLINM Sbjct 187 IAGAFGYYRESGEFVLFEAPAVVLATGGVGRSYKVTSNSWEYTGDGHALALRAGATLINM 246 Query 244 EFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENSRFMFDYIPPVFKGQYAETEEEA 303 EF+QFHPTGMVWPPSVKGILVTE VRGDGGVLKNSE RFMFDY+P VF+ QYA++E EA Sbjct 247 EFLQFHPTGMVWPPSVKGILVTESVRGDGGVLKNSEGKRFMFDYVPDVFRKQYADSEAEA 306 Query 304 DQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPS 363 D+W D D+ RR P+LLPRDEVARAINSEVKAGRGTP GGVYLDIASRL EI+RRLPS Sbjct 307 DRWYDDPDNNRRPPELLPRDEVARAINSEVKAGRGTPAGGVYLDIASRLPAEEIRRRLPS 366 Query 364 MYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDADTGAAT--VPGLFAAGECAGGMHGS 421 MYHQFKELA+VDIT ++MEVGPTCHYVMGGVEVD D+GAA V GLFAAGE +GGMHGS Sbjct 367 MYHQFKELADVDITRESMEVGPTCHYVMGGVEVDPDSGAAFGHVRGLFAAGEVSGGMHGS 426 Query 422 NRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKDGSAP 481 NRLGGNSLSDLLVFG+RAG AA Y L+SRP V A++ A + AL+P + +D Sbjct 427 NRLGGNSLSDLLVFGKRAGGHAASYADGLASRPRVPVPAVETAVETALAPLQ--RDTG-- 482 Query 482 ENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVEGHRQYNPGWNLSI 541 E+PY L DLQ VM DLVGIIR E+ AL+ L EL R V G R+YNPGW+L++ Sbjct 483 ESPYVLQQDLQAVMGDLVGIIRREGELVDALSRLGELRERVAKVSAAGGRRYNPGWHLAL 542 Query 542 DLRNMLLVSECVARAALQRTESRGGHTRDDHPGMDPNWRRILLVCRATETMGTGGSGSGD 601 DLRNML+VSEC A+AAL+R ESRGGHTR+DHP MDP WRR+ VC + + Sbjct 543 DLRNMLVVSECTAKAALERRESRGGHTREDHPTMDPAWRRVNQVCSLEDDI--------- 593 Query 602 SNCHINVTQQLQTPMRPDLLELFEISELEKYYTDEELAE 640 +++ ++ MRP+L LF+ +EL KY TDEELAE Sbjct 594 ----VHLDRKPLPRMRPELFALFDRAELAKYLTDEELAE 628 Lambda K H 0.318 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1498174480000 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40