BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0250c Length=97 Score E Sequences producing significant alignments: (Bits) Value gi|15607391|ref|NP_214764.1| hypothetical protein Rv0250c [Mycob... 193 6e-48 gi|240168474|ref|ZP_04747133.1| hypothetical protein MkanA1_0412... 161 2e-38 gi|296167532|ref|ZP_06849884.1| conserved hypothetical protein [... 160 8e-38 gi|15839631|ref|NP_334668.1| hypothetical protein MT0264 [Mycoba... 154 6e-36 gi|183980541|ref|YP_001848832.1| hypothetical protein MMAR_0513 ... 153 6e-36 gi|41409798|ref|NP_962634.1| hypothetical protein MAP3700c [Myco... 151 3e-35 gi|254820419|ref|ZP_05225420.1| hypothetical protein MintA_10841... 150 4e-35 gi|15828373|ref|NP_302636.1| hypothetical protein ML2557 [Mycoba... 147 4e-34 gi|342859274|ref|ZP_08715928.1| hypothetical protein MCOL_10358 ... 145 2e-33 gi|333988877|ref|YP_004521491.1| hypothetical protein JDM601_023... 135 2e-30 gi|145220996|ref|YP_001131674.1| hypothetical protein Mflv_0392 ... 120 6e-26 gi|108797235|ref|YP_637432.1| hypothetical protein Mmcs_0255 [My... 120 6e-26 gi|118471681|ref|YP_884833.1| hypothetical protein MSMEG_0420 [M... 114 6e-24 gi|169631495|ref|YP_001705144.1| hypothetical protein MAB_4420 [... 99.4 2e-19 gi|120401314|ref|YP_951143.1| hypothetical protein Mvan_0288 [My... 93.2 1e-17 gi|300784258|ref|YP_003764549.1| hypothetical protein AMED_2350 ... 81.6 4e-14 gi|291008611|ref|ZP_06566584.1| hypothetical protein SeryN2_2916... 81.3 5e-14 gi|134097760|ref|YP_001103421.1| hypothetical protein SACE_1168 ... 80.9 5e-14 gi|302525500|ref|ZP_07277842.1| conserved hypothetical protein [... 80.5 7e-14 gi|256375562|ref|YP_003099222.1| hypothetical protein Amir_1424 ... 74.3 5e-12 gi|257056753|ref|YP_003134585.1| hypothetical protein Svir_27770... 73.2 1e-11 gi|312140084|ref|YP_004007420.1| hypothetical protein REQ_27190 ... 72.0 3e-11 gi|333919353|ref|YP_004492934.1| hypothetical protein AS9A_1685 ... 69.3 2e-10 gi|256378823|ref|YP_003102483.1| hypothetical protein Amir_4810 ... 68.9 2e-10 gi|118471161|ref|YP_884579.1| hypothetical protein MSMEG_0163 [M... 65.9 2e-09 gi|111018064|ref|YP_701036.1| hypothetical protein RHA1_ro01051 ... 63.2 1e-08 gi|226360192|ref|YP_002777970.1| hypothetical protein ROP_07780 ... 60.8 6e-08 gi|334337182|ref|YP_004542334.1| hypothetical protein Isova_1688... 58.9 3e-07 gi|229822045|ref|YP_002883571.1| hypothetical protein Bcav_3567 ... 55.1 4e-06 gi|343927514|ref|ZP_08766985.1| hypothetical protein GOALK_094_0... 54.7 5e-06 gi|54027574|ref|YP_121816.1| hypothetical protein nfa56000 [Noca... 52.0 3e-05 gi|269956999|ref|YP_003326788.1| hypothetical protein Xcel_2212 ... 49.3 2e-04 gi|290962697|ref|YP_003493879.1| hypothetical protein SCAB_84061... 48.1 4e-04 gi|74026495|gb|AAZ94404.1| hypothetical protein [Streptomyces ne... 47.4 8e-04 gi|345009080|ref|YP_004811434.1| hypothetical protein Strvi_1413... 45.4 0.002 gi|337767943|emb|CCB76656.1| conserved protein of unknown functi... 44.7 0.004 gi|29829721|ref|NP_824355.1| hypothetical protein SAV_3179 [Stre... 43.5 0.010 gi|21223480|ref|NP_629259.1| hypothetical protein SCO5109 [Strep... 43.5 0.010 gi|291437475|ref|ZP_06576865.1| LOW QUALITY PROTEIN: conserved h... 43.1 0.013 gi|289769312|ref|ZP_06528690.1| conserved hypothetical protein [... 43.1 0.013 gi|297202147|ref|ZP_06919544.1| conserved hypothetical protein [... 42.7 0.018 gi|254381878|ref|ZP_04997241.1| hypothetical protein SSAG_01543 ... 41.6 0.035 gi|290957633|ref|YP_003488815.1| hypothetical protein SCAB_31581... 41.2 0.049 gi|302542782|ref|ZP_07295124.1| conserved hypothetical protein [... 41.2 0.053 gi|284033411|ref|YP_003383342.1| hypothetical protein Kfla_5535 ... 41.2 0.054 gi|329939543|ref|ZP_08288844.1| hypothetical protein SGM_4336 [S... 40.0 0.10 gi|116198093|ref|XP_001224858.1| hypothetical protein CHGG_07202... 40.0 0.11 gi|302536674|ref|ZP_07289016.1| conserved hypothetical protein [... 40.0 0.11 gi|297157546|gb|ADI07258.1| hypothetical protein SBI_04137 [Stre... 37.0 0.96 gi|48697223|ref|YP_024953.1| putative methyl transferase protein... 36.6 1.3 >gi|15607391|ref|NP_214764.1| hypothetical protein Rv0250c [Mycobacterium tuberculosis H37Rv] gi|31791428|ref|NP_853921.1| hypothetical protein Mb0256c [Mycobacterium bovis AF2122/97] gi|121636163|ref|YP_976386.1| hypothetical protein BCG_0288c [Mycobacterium bovis BCG str. Pasteur 1173P2] 77 more sequence titles Length=97 Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 96/97 (99%), Positives = 97/97 (100%), Gaps = 0/97 (0%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +STTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL Sbjct 1 MSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 Query 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHRY 97 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHRY Sbjct 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHRY 97 >gi|240168474|ref|ZP_04747133.1| hypothetical protein MkanA1_04127 [Mycobacterium kansasii ATCC 12478] Length=98 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 79/98 (81%), Positives = 90/98 (92%), Gaps = 1/98 (1%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +S +AE+AELHDL+GGLRRCVT+LK+R+GD+PA RRIVIDADRILTDIELLDTDVSELDL Sbjct 1 MSASAEIAELHDLIGGLRRCVTSLKSRYGDDPAMRRIVIDADRILTDIELLDTDVSELDL 60 Query 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH-RY 97 +RAA EKIAIPDT+YDR+FWRDVDDEGVGGH RY Sbjct 61 DRAAAQYSGEKIAIPDTDYDRDFWRDVDDEGVGGHSRY 98 >gi|296167532|ref|ZP_06849884.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897154|gb|EFG76763.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=98 Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 75/95 (79%), Positives = 84/95 (89%), Gaps = 0/95 (0%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +STT ELAELHDL+GGLRRCV +LK R+GD+PA RRIVIDADRIL+D+E+LDTDVSELDL Sbjct 1 MSTTTELAELHDLIGGLRRCVGSLKTRYGDSPAMRRIVIDADRILSDVEMLDTDVSELDL 60 Query 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 RA V Q EKI IPDT+YD EFWRDVDDEGVGGH Sbjct 61 SRATVQQSGEKIVIPDTQYDTEFWRDVDDEGVGGH 95 >gi|15839631|ref|NP_334668.1| hypothetical protein MT0264 [Mycobacterium tuberculosis CDC1551] gi|13879749|gb|AAK44482.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=77 Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 76/77 (99%), Positives = 77/77 (100%), Gaps = 0/77 (0%) Query 21 VTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQPSEKIAIPDTEYD 80 +TALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQPSEKIAIPDTEYD Sbjct 1 MTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQPSEKIAIPDTEYD 60 Query 81 REFWRDVDDEGVGGHRY 97 REFWRDVDDEGVGGHRY Sbjct 61 REFWRDVDDEGVGGHRY 77 >gi|183980541|ref|YP_001848832.1| hypothetical protein MMAR_0513 [Mycobacterium marinum M] gi|183173867|gb|ACC38977.1| conserved hypothetical protein [Mycobacterium marinum M] Length=98 Score = 153 bits (387), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 74/98 (76%), Positives = 88/98 (90%), Gaps = 1/98 (1%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +S T ELAELHDL+G LRRCVT+LK+R+GD+ RR+VIDADRILTDI+LLDTD++ELDL Sbjct 1 MSPTNELAELHDLIGDLRRCVTSLKSRYGDDSGMRRVVIDADRILTDIQLLDTDIAELDL 60 Query 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH-RY 97 +RA+V Q EKIAIPDT+YDR+FWRDVDDEGVGGH RY Sbjct 61 DRASVQQSVEKIAIPDTDYDRDFWRDVDDEGVGGHSRY 98 >gi|41409798|ref|NP_962634.1| hypothetical protein MAP3700c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466610|ref|YP_884028.1| hypothetical protein MAV_4907 [Mycobacterium avium 104] gi|254777346|ref|ZP_05218862.1| hypothetical protein MaviaA2_22126 [Mycobacterium avium subsp. avium ATCC 25291] gi|41398630|gb|AAS06250.1| hypothetical protein MAP_3700c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167897|gb|ABK68794.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336460116|gb|EGO39022.1| hypothetical protein MAPs_43720 [Mycobacterium avium subsp. paratuberculosis S397] Length=104 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 70/90 (78%), Positives = 81/90 (90%), Gaps = 0/90 (0%) Query 6 ELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAV 65 E AELHDL+GGLRRCV++L+AR+GD+PA RRIVIDADRIL+D++LLDTDVSELDL RA V Sbjct 12 EFAELHDLIGGLRRCVSSLRARYGDSPAMRRIVIDADRILSDVDLLDTDVSELDLARATV 71 Query 66 PQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 Q EK+ IPDT+YD EFWRDVDDEGVGGH Sbjct 72 QQSGEKVVIPDTQYDSEFWRDVDDEGVGGH 101 >gi|254820419|ref|ZP_05225420.1| hypothetical protein MintA_10841 [Mycobacterium intracellulare ATCC 13950] Length=101 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 70/92 (77%), Positives = 81/92 (89%), Gaps = 0/92 (0%) Query 4 TAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERA 63 T E AELHDL+GGLRRCV++L++R+GD+PA RRIVIDADRIL+D++LLDTDVSELDL A Sbjct 7 TTEFAELHDLIGGLRRCVSSLRSRYGDSPAMRRIVIDADRILSDVDLLDTDVSELDLAGA 66 Query 64 AVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 V Q EKI IPDT+YD EFWRDVDDEGVGGH Sbjct 67 TVQQSGEKIVIPDTQYDSEFWRDVDDEGVGGH 98 >gi|15828373|ref|NP_302636.1| hypothetical protein ML2557 [Mycobacterium leprae TN] gi|221230850|ref|YP_002504266.1| hypothetical protein MLBr_02557 [Mycobacterium leprae Br4923] gi|3063888|emb|CAA18576.1| hypothetical protein MLCB1883.27c [Mycobacterium leprae] gi|13093803|emb|CAC32088.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933957|emb|CAR72656.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=98 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 69/95 (73%), Positives = 80/95 (85%), Gaps = 0/95 (0%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 + T ELAELHDL+G +RR V + KAR+GD+PA RRI IDADRIL+DIELLD D+SELDL Sbjct 1 MYATTELAELHDLIGRMRRSVASFKARYGDSPAMRRIAIDADRILSDIELLDADISELDL 60 Query 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 RA V Q +EKIAIPDT+YD +FWRDVDDEGVGGH Sbjct 61 ARATVQQSNEKIAIPDTQYDSDFWRDVDDEGVGGH 95 >gi|342859274|ref|ZP_08715928.1| hypothetical protein MCOL_10358 [Mycobacterium colombiense CECT 3035] gi|342133515|gb|EGT86718.1| hypothetical protein MCOL_10358 [Mycobacterium colombiense CECT 3035] Length=104 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/90 (75%), Positives = 79/90 (88%), Gaps = 0/90 (0%) Query 6 ELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAV 65 E AELHDL+GGLRRCV++L++R+GD+PA RRIVIDADRI++D++LLDTDVSELDL A V Sbjct 12 EFAELHDLIGGLRRCVSSLRSRYGDSPAMRRIVIDADRIMSDVDLLDTDVSELDLAGATV 71 Query 66 PQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 Q EKI IPDT+YD EFWRDVDDEGVGG Sbjct 72 QQSGEKIVIPDTQYDSEFWRDVDDEGVGGQ 101 >gi|333988877|ref|YP_004521491.1| hypothetical protein JDM601_0237 [Mycobacterium sp. JDM601] gi|333484845|gb|AEF34237.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=98 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/98 (68%), Positives = 78/98 (80%), Gaps = 1/98 (1%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +S+T+ELAELH L+G LRRCV LK RFGD P RRI +DA+RIL D++LL++D ELDL Sbjct 1 MSSTSELAELHALIGDLRRCVLGLKTRFGDIPGMRRIEMDAERILADVQLLESDAGELDL 60 Query 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH-RY 97 +R A + EKIAIPDTEYD EFWRDVDDEGVGG RY Sbjct 61 QRWAAERAQEKIAIPDTEYDSEFWRDVDDEGVGGQGRY 98 >gi|145220996|ref|YP_001131674.1| hypothetical protein Mflv_0392 [Mycobacterium gilvum PYR-GCK] gi|315442033|ref|YP_004074912.1| hypothetical protein Mspyr1_03640 [Mycobacterium sp. Spyr1] gi|145213482|gb|ABP42886.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260336|gb|ADT97077.1| hypothetical protein Mspyr1_03640 [Mycobacterium sp. Spyr1] Length=100 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/95 (63%), Positives = 74/95 (78%), Gaps = 2/95 (2%) Query 2 STTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLE 61 ++T ELA+LHDL+G LRRCVT+L +R+GD+PATRRIV DA+RIL DI+ LD D EL+L Sbjct 4 TSTTELAQLHDLIGSLRRCVTSLASRYGDSPATRRIVNDAERILNDIDRLDIDAEELELA 63 Query 62 RAAV--PQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 R +E+I IPDT+YD EFWR VDDEG+GG Sbjct 64 RGVSRHHHVAERIPIPDTQYDTEFWRGVDDEGLGG 98 >gi|108797235|ref|YP_637432.1| hypothetical protein Mmcs_0255 [Mycobacterium sp. MCS] gi|119866320|ref|YP_936272.1| hypothetical protein Mkms_0265 [Mycobacterium sp. KMS] gi|126432858|ref|YP_001068549.1| hypothetical protein Mjls_0245 [Mycobacterium sp. JLS] gi|108767654|gb|ABG06376.1| hypothetical protein Mmcs_0255 [Mycobacterium sp. MCS] gi|119692409|gb|ABL89482.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126232658|gb|ABN96058.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=118 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 61/96 (64%), Positives = 72/96 (75%), Gaps = 2/96 (2%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 LSTT AELH+L+GGLRRCVTAL +++GD+PA RRIV DA+RIL DI+ LD D EL+L Sbjct 21 LSTTTGFAELHELIGGLRRCVTALASQYGDSPAMRRIVNDAERILNDIDRLDIDAEELEL 80 Query 61 ERAAV--PQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 R EKI IPDT+YD EFWR VDDEG+GG Sbjct 81 GRGLSRHHHVGEKIPIPDTQYDTEFWRGVDDEGLGG 116 >gi|118471681|ref|YP_884833.1| hypothetical protein MSMEG_0420 [Mycobacterium smegmatis str. MC2 155] gi|118172968|gb|ABK73864.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=98 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 73/98 (75%), Gaps = 2/98 (2%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +STT E AELH+L+G +RRCVT L A++GD+PA RR+ DA+RIL DI+ LD D EL++ Sbjct 1 MSTTTEFAELHNLIGDMRRCVTTLAAKYGDSPAMRRVTNDAERILNDIDRLDIDAEELEM 60 Query 61 ERAAV-PQP-SEKIAIPDTEYDREFWRDVDDEGVGGHR 96 +P +EKI +PDT+Y EFW+DV DEG+GG+R Sbjct 61 HHGITRTKPGTEKIPVPDTQYGTEFWQDVADEGLGGYR 98 >gi|169631495|ref|YP_001705144.1| hypothetical protein MAB_4420 [Mycobacterium abscessus ATCC 19977] gi|169243462|emb|CAM64490.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=90 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 14/100 (14%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +ST EL EL+ +G LRRCV +L++R+GD PA RRIV D+E LD D ++LDL Sbjct 1 MSTKTELTELNQALGSLRRCVHSLQSRYGDLPAVRRIV-------NDVERLDIDAADLDL 53 Query 61 ----ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHR 96 R A +EKI IPDTEYDREFW D+DDEGVGG+R Sbjct 54 APHEHRLA---GNEKIQIPDTEYDREFWGDIDDEGVGGYR 90 >gi|120401314|ref|YP_951143.1| hypothetical protein Mvan_0288 [Mycobacterium vanbaalenii PYR-1] gi|119954132|gb|ABM11137.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=78 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/76 (61%), Positives = 59/76 (78%), Gaps = 2/76 (2%) Query 21 VTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQP--SEKIAIPDTE 78 +T+L +R+GD+PATRRIV DA+R+L DI+ LD D EL+L R P +E+IAIPDT+ Sbjct 1 MTSLASRYGDSPATRRIVNDAERLLNDIDRLDIDAEELELVRGVSRHPHVAERIAIPDTQ 60 Query 79 YDREFWRDVDDEGVGG 94 YD EFWR VDDEG+GG Sbjct 61 YDTEFWRGVDDEGLGG 76 >gi|300784258|ref|YP_003764549.1| hypothetical protein AMED_2350 [Amycolatopsis mediterranei U32] gi|299793772|gb|ADJ44147.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340525676|gb|AEK40881.1| hypothetical protein RAM_11955 [Amycolatopsis mediterranei S699] Length=96 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/99 (43%), Positives = 62/99 (63%), Gaps = 10/99 (10%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 + +T+E+AEL +G LR+CV AL++R+GD A RR+ D+E LD D ++LD Sbjct 1 MMSTSEIAELRRTIGQLRQCVGALRSRYGDASAVRRLA-------NDVERLDIDTADLDG 53 Query 61 ERAAVP---QPSEKIAIPDTEYDREFWRDVDDEGVGGHR 96 AVP + +E++ +PDT YD W DDEGVGG++ Sbjct 54 VPLAVPAQAKAAERVPVPDTPYDPALWHGADDEGVGGYK 92 >gi|291008611|ref|ZP_06566584.1| hypothetical protein SeryN2_29163 [Saccharopolyspora erythraea NRRL 2338] Length=99 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/96 (47%), Positives = 59/96 (62%), Gaps = 5/96 (5%) Query 2 STTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLE 61 STT ELA+L +G LR V AL++R+GD A RRI D +R+ DI +++ L + Sbjct 6 STTTELADLQRALGQLRTSVGALRSRYGDVNAVRRISNDVERLGIDI----AELTSLPVP 61 Query 62 RA-AVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHR 96 R A P +E + +PDT YD WRD DDEGVGG R Sbjct 62 RGGAGPGAAETVIVPDTPYDSSLWRDADDEGVGGQR 97 >gi|134097760|ref|YP_001103421.1| hypothetical protein SACE_1168 [Saccharopolyspora erythraea NRRL 2338] gi|133910383|emb|CAM00496.1| hypothetical protein SACE_1168 [Saccharopolyspora erythraea NRRL 2338] Length=96 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/96 (47%), Positives = 59/96 (62%), Gaps = 5/96 (5%) Query 2 STTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLE 61 STT ELA+L +G LR V AL++R+GD A RRI D +R+ DI +++ L + Sbjct 3 STTTELADLQRALGQLRTSVGALRSRYGDVNAVRRISNDVERLGIDI----AELTSLPVP 58 Query 62 RA-AVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHR 96 R A P +E + +PDT YD WRD DDEGVGG R Sbjct 59 RGGAGPGAAETVIVPDTPYDSSLWRDADDEGVGGQR 94 >gi|302525500|ref|ZP_07277842.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302434395|gb|EFL06211.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=95 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 42/97 (44%), Positives = 59/97 (61%), Gaps = 10/97 (10%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 +T E+AEL +G LR+CV AL++R+GD A RR+ D+E LD D ++LD Sbjct 2 STTEIAELRRTIGQLRQCVGALRSRYGDASAVRRLA-------NDVERLDIDTADLDGHP 54 Query 63 AAVPQPS---EKIAIPDTEYDREFWRDVDDEGVGGHR 96 AVP + E++ +PDT YD W DDEGVGG++ Sbjct 55 PAVPAQAKAVERVPVPDTPYDPALWSGADDEGVGGYK 91 >gi|256375562|ref|YP_003099222.1| hypothetical protein Amir_1424 [Actinosynnema mirum DSM 43827] gi|255919865|gb|ACU35376.1| hypothetical protein Amir_1424 [Actinosynnema mirum DSM 43827] Length=97 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/101 (43%), Positives = 58/101 (58%), Gaps = 15/101 (14%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 T++E+AEL VG LR+ V A++AR GD PA RR+ D+E LD D ++L E Sbjct 2 TSSEIAELRRAVGRLRQAVVAVRARHGDVPAVRRLA-------NDVERLDIDAADLS-EA 53 Query 63 AAVPQP-------SEKIAIPDTEYDREFWRDVDDEGVGGHR 96 P+P E + +PDT YD W D DDEG+GG+R Sbjct 54 PIAPRPRQAPDVEREVVVVPDTPYDASLWHDADDEGLGGYR 94 >gi|257056753|ref|YP_003134585.1| hypothetical protein Svir_27770 [Saccharomonospora viridis DSM 43017] gi|256586625|gb|ACU97758.1| hypothetical protein Svir_27770 [Saccharomonospora viridis DSM 43017] Length=96 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/94 (44%), Positives = 57/94 (61%), Gaps = 3/94 (3%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 ++AE+ EL +G LR+CV AL+AR+G+ PA RRIV D DR+ D L +S L L Sbjct 2 SSAEMTELRRAIGQLRQCVGALRARYGEPPAVRRIVNDVDRLDIDAAEL-AQLSPLPLRG 60 Query 63 AAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHR 96 ++ + I DT YD W+ DDEGVGG++ Sbjct 61 HGT--HTDVVKISDTPYDPALWKGADDEGVGGYQ 92 >gi|312140084|ref|YP_004007420.1| hypothetical protein REQ_27190 [Rhodococcus equi 103S] gi|325674439|ref|ZP_08154127.1| hypothetical protein HMPREF0724_11909 [Rhodococcus equi ATCC 33707] gi|311889423|emb|CBH48740.1| conserved hypothetical protein [Rhodococcus equi 103S] gi|325554699|gb|EGD24373.1| hypothetical protein HMPREF0724_11909 [Rhodococcus equi ATCC 33707] Length=94 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 15/100 (15%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 TT E+ +L +G LR+CV +L+ R+GD A RR+ D DR+ D D+SE Sbjct 2 TTTEVMDLQRTIGHLRQCVGSLRERYGDASAVRRLANDVDRLDIDAH----DLSE----- 52 Query 63 AAVPQPS-----EKIAIPDTEYDREFWRDVDDEGVGGHRY 97 + P+P+ E++ +PDT YDR W+ DDEG+GG+ + Sbjct 53 -SPPRPTSGATAERVQVPDTPYDRSLWQGADDEGLGGNPH 91 >gi|333919353|ref|YP_004492934.1| hypothetical protein AS9A_1685 [Amycolicicoccus subflavus DQS3-9A1] gi|333481574|gb|AEF40134.1| hypothetical protein AS9A_1685 [Amycolicicoccus subflavus DQS3-9A1] Length=96 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/92 (42%), Positives = 53/92 (58%), Gaps = 2/92 (2%) Query 4 TAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERA 63 T E +EL +G LR+ V L ++GD P+ RR+V D +R+ D++ D + S A Sbjct 2 TTETSELRRGIGQLRQSVRTLMMKYGDAPSVRRLVTDLERLSIDVD--DFEQSRPAPVSA 59 Query 64 AVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 + EKI +PDT YD W VDDEGVGG+ Sbjct 60 SAAAKQEKIPVPDTPYDDSLWAGVDDEGVGGY 91 >gi|256378823|ref|YP_003102483.1| hypothetical protein Amir_4810 [Actinosynnema mirum DSM 43827] gi|255923126|gb|ACU38637.1| hypothetical protein Amir_4810 [Actinosynnema mirum DSM 43827] Length=90 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/89 (42%), Positives = 50/89 (57%), Gaps = 9/89 (10%) Query 8 AELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQ 67 +EL +G LRRC++ L++ GDN RR+ +E L+ D +EL P Sbjct 7 SELDRALGELRRCISTLRSHHGDNVTIRRLA-------NGVERLEIDAAELPAR--GRPV 57 Query 68 PSEKIAIPDTEYDREFWRDVDDEGVGGHR 96 E + +PDT YD WRDVDDEG+GGHR Sbjct 58 AGEVVYVPDTPYDPALWRDVDDEGIGGHR 86 >gi|118471161|ref|YP_884579.1| hypothetical protein MSMEG_0163 [Mycobacterium smegmatis str. MC2 155] gi|118172448|gb|ABK73344.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=103 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/91 (44%), Positives = 52/91 (58%), Gaps = 5/91 (5%) Query 9 ELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQP 68 LH L+ L V+AL+ G PA R+V D +RI IE L D++EL A V Sbjct 12 SLHRLIDNLMHHVSALEVTHGRVPAVHRVVNDVERIRNGIERLKIDLAEL--APAGVRSS 69 Query 69 S---EKIAIPDTEYDREFWRDVDDEGVGGHR 96 + EKI IPD++Y +FWRDVD EG+ G R Sbjct 70 ATAVEKIQIPDSDYGIDFWRDVDHEGIAGVR 100 >gi|111018064|ref|YP_701036.1| hypothetical protein RHA1_ro01051 [Rhodococcus jostii RHA1] gi|110817594|gb|ABG92878.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=94 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (38%), Positives = 54/97 (56%), Gaps = 9/97 (9%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 +T+E+ EL+ + LRR V +L++ +GD + RR+ D+E L+ D ELD Sbjct 2 STSEMLELNRTIDRLRRAVGSLRSMYGDAASVRRLS-------NDLERLEIDARELDSSP 54 Query 63 AAV--PQPSEKIAIPDTEYDREFWRDVDDEGVGGHRY 97 V +P E+I + DT YD W +DDEG+GG Y Sbjct 55 PNVVHREPVERIKVSDTPYDASMWLGIDDEGLGGLHY 91 >gi|226360192|ref|YP_002777970.1| hypothetical protein ROP_07780 [Rhodococcus opacus B4] gi|226238677|dbj|BAH49025.1| hypothetical protein [Rhodococcus opacus B4] Length=94 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/97 (37%), Positives = 53/97 (55%), Gaps = 9/97 (9%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 +T+E+ EL+ + LRR V +L+ +GD + RR+ D+E L+ D +LD Sbjct 2 STSEMLELNRTIDRLRRAVGSLRTMYGDAASVRRLS-------NDLERLEIDARDLDASP 54 Query 63 AAV--PQPSEKIAIPDTEYDREFWRDVDDEGVGGHRY 97 V +P E+I + DT YD W +DDEG+GG Y Sbjct 55 PNVVHREPVERIKVSDTPYDASMWLGIDDEGLGGLHY 91 >gi|334337182|ref|YP_004542334.1| hypothetical protein Isova_1688 [Isoptericola variabilis 225] gi|334107550|gb|AEG44440.1| hypothetical protein Isova_1688 [Isoptericola variabilis 225] Length=94 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/95 (38%), Positives = 47/95 (50%), Gaps = 9/95 (9%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLE- 61 TT E A L + LR V +++ FGD P RR+V D+E L+ D EL Sbjct 2 TTTEFATLRRSIEQLRASVAEVRSAFGDAPEVRRLV-------NDLERLEIDAGELASRP 54 Query 62 -RAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 R P + + +PDT D W D DDEGVGG+ Sbjct 55 LRRTHPDDAPHVVVPDTPLDETMWSDADDEGVGGY 89 >gi|229822045|ref|YP_002883571.1| hypothetical protein Bcav_3567 [Beutenbergia cavernae DSM 12333] gi|229567958|gb|ACQ81809.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333] Length=97 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/98 (35%), Positives = 53/98 (55%), Gaps = 12/98 (12%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 TTAE+A L + LR V ++ +GD+ RR+V D+E L+ D +EL R Sbjct 2 TTAEIATLRRSIDQLRHSVQGVRQTYGDSAEVRRLV-------NDLERLEIDAAELASAR 54 Query 63 ----AAVP-QPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 A+ P + + + +PDT +D + D DDEG+GG+ Sbjct 55 LVRQASTPAEVPDAVVVPDTPHDEAMFADADDEGIGGY 92 >gi|343927514|ref|ZP_08766985.1| hypothetical protein GOALK_094_00200 [Gordonia alkanivorans NBRC 16433] gi|343762588|dbj|GAA13911.1| hypothetical protein GOALK_094_00200 [Gordonia alkanivorans NBRC 16433] Length=97 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/92 (34%), Positives = 50/92 (55%), Gaps = 3/92 (3%) Query 4 TAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERA 63 AE+ +H + LR + LKAR+GD + RR+V D DR+ DI+L D + ++ Sbjct 3 NAEINAIHHSIQALRHQLVTLKARYGDADSVRRMVNDLDRL--DIDLHDFEQHPPKVKPQ 60 Query 64 AVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 P + ++ +PD++ D W DEG+G H Sbjct 61 QKPGQA-RVYVPDSKSDESAWLGAQDEGLGFH 91 >gi|54027574|ref|YP_121816.1| hypothetical protein nfa56000 [Nocardia farcinica IFM 10152] gi|54019082|dbj|BAD60452.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=95 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/97 (31%), Positives = 50/97 (52%), Gaps = 13/97 (13%) Query 3 TTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLER 62 T +++AEL V LR+ + AL+ +GD RR+ D +R++ D + + E+ Sbjct 2 TRSDIAELRYAVNQLRQSIGALRTHYGDANTVRRLENDLERLMIDAD---------EFEQ 52 Query 63 AAVPQ----PSEKIAIPDTEYDREFWRDVDDEGVGGH 95 A P+ P + I +PD++ D W DEG+G H Sbjct 53 APPPEIRRRPQDTIYVPDSKSDEAAWMGAQDEGLGFH 89 >gi|269956999|ref|YP_003326788.1| hypothetical protein Xcel_2212 [Xylanimonas cellulosilytica DSM 15894] gi|269305680|gb|ACZ31230.1| hypothetical protein Xcel_2212 [Xylanimonas cellulosilytica DSM 15894] Length=91 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/95 (35%), Positives = 45/95 (48%), Gaps = 13/95 (13%) Query 4 TAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERA 63 T E A L + LR+ V ++ FGD P RR+ L D+E L+ D EL Sbjct 2 TTEFAALRRSIDQLRQSVAGVRDAFGDAPEVRRL-------LNDLERLEIDAGEL---AT 51 Query 64 AVPQPSEKIAIPD---TEYDREFWRDVDDEGVGGH 95 A P+P+ + T D W D DDEG+GG+ Sbjct 52 ATPRPAHVPDVVVVPDTPLDPSLWSDADDEGIGGY 86 >gi|290962697|ref|YP_003493879.1| hypothetical protein SCAB_84061 [Streptomyces scabiei 87.22] gi|260652223|emb|CBG75356.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=104 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/82 (38%), Positives = 42/82 (52%), Gaps = 6/82 (7%) Query 17 LRRCVTALKAR-FGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQPSEK--IA 73 L CV +L++ FG+ PA + D +R+ L V E +A P E+ IA Sbjct 16 LAHCVGSLRSSGFGEPPALNGLADDVERLRLRARAL---VGEPADAVSARPPAGERATIA 72 Query 74 IPDTEYDREFWRDVDDEGVGGH 95 +PD+ YD W DDEGVGGH Sbjct 73 VPDSPYDARLWHGADDEGVGGH 94 >gi|74026495|gb|AAZ94404.1| hypothetical protein [Streptomyces neyagawaensis] Length=107 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/82 (38%), Positives = 40/82 (49%), Gaps = 6/82 (7%) Query 17 LRRCVTALKAR-FGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQPSEKIAIP 75 L CV +L++ FG+ PA R+ D +R+ L V E +A P E+ IP Sbjct 16 LAHCVGSLRSSGFGEPPALTRLADDVERLRLHARAL---VGEPADAVSARPPAGERATIP 72 Query 76 --DTEYDREFWRDVDDEGVGGH 95 D YD W DDEGVGGH Sbjct 73 VSDMPYDARLWHGADDEGVGGH 94 >gi|345009080|ref|YP_004811434.1| hypothetical protein Strvi_1413 [Streptomyces violaceusniger Tu 4113] gi|344035429|gb|AEM81154.1| hypothetical protein Strvi_1413 [Streptomyces violaceusniger Tu 4113] Length=94 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/95 (36%), Positives = 47/95 (50%), Gaps = 8/95 (8%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNP-ATRRIVIDADRILTDIELLDTDVSELD 59 +S T +L + + L R V+ L+ R G RR+ DAD + + LL E Sbjct 1 MSLTDDLTAVQRCLDDLVRSVSRLEQRVGAGGLEIRRVRTDADHLRESLALLRETAPE-- 58 Query 60 LERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 ER P+P E + +PD YD W DVDDEG+G Sbjct 59 -ER---PRP-EMVPVPDAPYDSALWSDVDDEGLGA 88 >gi|337767943|emb|CCB76656.1| conserved protein of unknown function [Streptomyces cattleya NRRL 8057] Length=103 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/81 (34%), Positives = 39/81 (49%), Gaps = 3/81 (3%) Query 17 LRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVS---ELDLERAAVPQPSEKIA 73 L RC+ +L++ G + RR+ DA + D+ LL RAA P I Sbjct 17 LDRCLASLESHVGPSLDMRRVRSDAAHLREDLALLGESAPAGRSGTAGRAADPAVDTMIT 76 Query 74 IPDTEYDREFWRDVDDEGVGG 94 +PD YDR W D ++EG+G Sbjct 77 VPDAPYDRSLWVDAEEEGLGA 97 >gi|29829721|ref|NP_824355.1| hypothetical protein SAV_3179 [Streptomyces avermitilis MA-4680] gi|29606830|dbj|BAC70890.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=95 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/94 (33%), Positives = 46/94 (49%), Gaps = 5/94 (5%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDL 60 +S +L + + L R V L+ + G RR+ DAD + + LL +E Sbjct 1 MSVHEDLTSVQRCLDDLARSVGRLEQQLGAGLEMRRVRADADHLRESLALLREAAAE--- 57 Query 61 ERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 A P+ + +AIPDT YD+ W D DDEG+G Sbjct 58 --PAAPRRPDLLAIPDTPYDKSLWTDSDDEGLGA 89 >gi|21223480|ref|NP_629259.1| hypothetical protein SCO5109 [Streptomyces coelicolor A3(2)] gi|14799984|emb|CAC44316.1| hypothetical protein SCBAC31E11.05c [Streptomyces coelicolor A3(2)] Length=146 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/95 (32%), Positives = 44/95 (47%), Gaps = 6/95 (6%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNP-ATRRIVIDADRILTDIELLDTDVSELD 59 LS +L+ + + L R VT L+ + G RR+ DAD + + LL + Sbjct 51 LSVHDDLSSVQRSLDELSRTVTRLEQQLGSGDLEVRRVRTDADHLRESVALLRAATAA-- 108 Query 60 LERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 P+ + + IPDT YD W D DDEG+G Sbjct 109 ---PQAPRRPDLVPIPDTPYDGSLWTDSDDEGLGA 140 >gi|291437475|ref|ZP_06576865.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291340370|gb|EFE67326.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=100 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/95 (32%), Positives = 43/95 (46%), Gaps = 5/95 (5%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNP-ATRRIVIDADRILTDIELLDTDVSELD 59 +S EL + + L R V L+ + G RR+ DA + + LL E Sbjct 4 MSVHDELTTVQRCLDDLIRSVGRLEKQLGSGGLEMRRVRTDAHHLRESVALL----RETA 59 Query 60 LERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 A P+ + ++IPDT YD W D DDEG+G Sbjct 60 ASSATAPKRPDLVSIPDTPYDPSLWVDTDDEGLGA 94 >gi|289769312|ref|ZP_06528690.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289699511|gb|EFD66940.1| conserved hypothetical protein [Streptomyces lividans TK24] Length=96 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (31%), Positives = 45/95 (48%), Gaps = 6/95 (6%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGD-NPATRRIVIDADRILTDIELLDTDVSELD 59 +S +L+ + + L R VT L+ + G + RR+ DAD + + LL + Sbjct 1 MSVHDDLSSVQRSLDELSRTVTRLEQQLGSGDLEVRRVRTDADHLRESVALLRAATAA-- 58 Query 60 LERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 P+ + + IPDT YD W D DDEG+G Sbjct 59 ---PQAPRRPDLVPIPDTPYDGSLWTDSDDEGLGA 90 >gi|297202147|ref|ZP_06919544.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197713583|gb|EDY57617.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=96 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 33/96 (35%), Positives = 46/96 (48%), Gaps = 6/96 (6%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNP-ATRRIVIDADRILTDIELLDTDVSELD 59 +S ELA + + R V L+ + G RR+ IDADR+ + LL E D Sbjct 1 MSVNDELAAAQRSLDEVLRYVKRLEQQLGSGGLEMRRVRIDADRLRESLALL----RETD 56 Query 60 LERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 A +P + ++I DT YD W D DDEG+G Sbjct 57 PALAKARRP-DLVSISDTPYDNTLWTDSDDEGLGAR 91 >gi|254381878|ref|ZP_04997241.1| hypothetical protein SSAG_01543 [Streptomyces sp. Mg1] gi|194340786|gb|EDX21752.1| hypothetical protein SSAG_01543 [Streptomyces sp. Mg1] Length=75 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 17/31 (55%), Positives = 20/31 (65%), Gaps = 0/31 (0%) Query 63 AAVPQPSEKIAIPDTEYDREFWRDVDDEGVG 93 +A P PS + IPDT YD W D DDEG+G Sbjct 38 SAPPDPSGMVTIPDTPYDSSLWTDTDDEGLG 68 >gi|290957633|ref|YP_003488815.1| hypothetical protein SCAB_31581 [Streptomyces scabiei 87.22] gi|260647159|emb|CBG70258.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=96 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 29/96 (31%), Positives = 43/96 (45%), Gaps = 6/96 (6%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNP-ATRRIVIDADRILTDIELLDTDVSELD 59 +S +L + + L R V L+ + G + RR+ DAD + + LL L Sbjct 1 MSVQDDLTAVRRCLDELTRSVRRLEQQLGGSGLEIRRVRTDADHLRESVALLGEAAPAL- 59 Query 60 LERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGH 95 P+ + + IPDT YD W D DDEG+G Sbjct 60 ----TKPRRPDLVTIPDTPYDSSLWTDSDDEGLGSR 91 >gi|302542782|ref|ZP_07295124.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302460400|gb|EFL23493.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length=95 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 33/96 (35%), Positives = 46/96 (48%), Gaps = 9/96 (9%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNP-ATRRIVIDADRILTDIELL-DTDVSEL 58 +S +L + + L R VT L+ R G RR+ DAD + + LL DT Sbjct 1 MSLNDDLTAVQRCLDELVRSVTRLEDRVGAGGLEIRRVRTDADHLRESLALLRDTAPG-- 58 Query 59 DLERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGG 94 A P+P E + +PD Y+ W DVDDEG+G Sbjct 59 ----AERPRP-EMVPVPDAPYNSALWSDVDDEGLGA 89 >gi|284033411|ref|YP_003383342.1| hypothetical protein Kfla_5535 [Kribbella flavida DSM 17836] gi|283812704|gb|ADB34543.1| hypothetical protein Kfla_5535 [Kribbella flavida DSM 17836] Length=97 Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust. Identities = 25/77 (33%), Positives = 32/77 (42%), Gaps = 4/77 (5%) Query 17 LRRCVTALKARFGDNPATRRIVIDADRILTDIELLDTDVSELDLERAAVPQPSEKIAIPD 76 L V L +GD RR+V D R+ D+ ++ D P P E IPD Sbjct 18 LHASVGKLSQEYGDTLGIRRLVSDVARLSDDL----AELGPPDPRHRPGPVPEELEEIPD 73 Query 77 TEYDREFWRDVDDEGVG 93 EYD W + EG G Sbjct 74 VEYDASMWTGAEHEGFG 90 >gi|329939543|ref|ZP_08288844.1| hypothetical protein SGM_4336 [Streptomyces griseoaurantiacus M045] gi|329301113|gb|EGG45008.1| hypothetical protein SGM_4336 [Streptomyces griseoaurantiacus M045] Length=90 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/99 (32%), Positives = 43/99 (44%), Gaps = 17/99 (17%) Query 1 LSTTAELAELHDLVGGLRRCVTALKARFGDNPA--TRRIVIDADRILTDIELLDTDVSEL 58 +S EL + V L R + L+ + G + RR+ DAD + + LL Sbjct 1 MSVQDELTTVQRCVDDLVRSLRRLEQQLGSSGGLEMRRVRADADHLRESVALL------- 53 Query 59 DLERAAVPQPSEK-----IAIPDTEYDREFWRDVDDEGV 92 R + P P +AIPDT YD W D DDEG+ Sbjct 54 ---RESAPLPERPGRPPLLAIPDTPYDTTLWTDSDDEGL 89 >gi|116198093|ref|XP_001224858.1| hypothetical protein CHGG_07202 [Chaetomium globosum CBS 148.51] gi|88178481|gb|EAQ85949.1| hypothetical protein CHGG_07202 [Chaetomium globosum CBS 148.51] Length=980 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/51 (40%), Positives = 34/51 (67%), Gaps = 3/51 (5%) Query 32 PATRRIVIDADRILTDIELLDTDVSELDLERAAVPQPSEKIAIPDTEYDRE 82 PA RR++ A+R++T ++L+T VS L++E +P P ++ IP YDR+ Sbjct 241 PARRRLIYGANRLVTGADILNTTVSNLEVESIHLPGP-HQLTIPG--YDRK 288 >gi|302536674|ref|ZP_07289016.1| conserved hypothetical protein [Streptomyces sp. C] gi|302445569|gb|EFL17385.1| conserved hypothetical protein [Streptomyces sp. C] Length=74 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/57 (41%), Positives = 31/57 (55%), Gaps = 5/57 (8%) Query 42 DRILTDIELLDTDVSELDLERAAVPQPSEK---IAIPDTEYDREFWRDVDDEGVGGH 95 D ++ +E L+ DV+ AA +P EK + IPDT YD W D DDEG+G Sbjct 15 DELVRSVEQLEKDVARQ--APAAGSRPPEKSGMVTIPDTPYDNALWTDTDDEGLGAR 69 >gi|297157546|gb|ADI07258.1| hypothetical protein SBI_04137 [Streptomyces bingchenggensis BCW-1] Length=94 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 22/63 (35%), Positives = 29/63 (47%), Gaps = 13/63 (20%) Query 35 RRIVIDADRILTDIELLDTDVSELDLERAAVP---QPSEKIAIPDTEYDREFWRDVDDEG 91 RR+ DAD + + LL RA P E + +PD Y+ W DVDDEG Sbjct 36 RRVRTDADHLRESLALL----------RATAPGERSSPEMVLVPDAPYNSALWLDVDDEG 85 Query 92 VGG 94 +G Sbjct 86 LGA 88 >gi|48697223|ref|YP_024953.1| putative methyl transferase protein [Burkholderia phage BcepC6B] gi|47779029|gb|AAT38392.1| putative methyl transferase protein [Burkholderia phage BcepC6B] Length=343 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/46 (40%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query 48 IELLDTDVSELDLERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVG 93 I+L+ TDV LD VP PS + P DR FW + G+G Sbjct 129 IDLVQTDVEALDYAYGCVPFPSAGVGAPHIR-DRTFWLAYANSGIG 173 Lambda K H 0.318 0.139 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130655526400 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40